EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000006449 (Gene tree)
Gene ID: 532864
Gene Symbol: REXO5
Alias: -
Full Name: Bos taurus RNA exonuclease 5 (REXO5)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 60805 bases
Position: chr25:18556283-18617087
Accession: NM_001038154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000008458	RRM_1	PF00076.22	4.3e-13	1	1
ENSBTAP00000008458	RNase_T	PF00929.24	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000008458	-	2908	XM_005224750	ENSBTAP00000008458	783 (aa)	XP_005224807	Q2T9U5

Gene Model

Click here to download ENSBTAG00000006449's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000006449's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000006449	REXO5	98	82.581	ENSG00000005189	REXO5	100	93.007	Homo_sapiens
ENSBTAG00000006449	REXO5	95	34.116	ENSAPOG00000008514	REXO5	97	34.116	Acanthochromis_polyacanthus
ENSBTAG00000006449	REXO5	98	85.548	ENSAMEG00000006178	REXO5	99	85.548	Ailuropoda_melanoleuca
ENSBTAG00000006449	REXO5	94	34.715	ENSAPEG00000010627	REXO5	99	34.474	Amphiprion_percula
ENSBTAG00000006449	REXO5	77	38.042	ENSATEG00000004682	REXO5	97	39.364	Anabas_testudineus
ENSBTAG00000006449	REXO5	92	49.330	ENSAPLG00000015740	REXO5	99	49.330	Anas_platyrhynchos
ENSBTAG00000006449	REXO5	91	46.612	ENSACAG00000009744	REXO5	94	46.612	Anolis_carolinensis
ENSBTAG00000006449	REXO5	98	80.233	ENSANAG00000034379	REXO5	99	80.233	Aotus_nancymaae
ENSBTAG00000006449	REXO5	75	36.533	ENSACLG00000004778	REXO5	99	36.533	Astatotilapia_calliptera
ENSBTAG00000006449	REXO5	98	80.362	ENSCJAG00000009363	REXO5	99	80.362	Callithrix_jacchus
ENSBTAG00000006449	REXO5	98	84.516	ENSCAFG00000017924	REXO5	100	84.516	Canis_familiaris
ENSBTAG00000006449	REXO5	98	82.603	ENSCAFG00020021846	REXO5	100	82.603	Canis_lupus_dingo
ENSBTAG00000006449	REXO5	98	94.423	ENSCHIG00000022443	REXO5	100	94.423	Capra_hircus
ENSBTAG00000006449	REXO5	98	73.057	ENSCPOG00000008940	REXO5	94	73.057	Cavia_porcellus
ENSBTAG00000006449	REXO5	98	81.912	ENSCCAG00000034936	REXO5	99	81.912	Cebus_capucinus
ENSBTAG00000006449	REXO5	98	83.009	ENSCATG00000044063	REXO5	99	83.009	Cercocebus_atys
ENSBTAG00000006449	REXO5	98	75.777	ENSCLAG00000008033	REXO5	94	75.777	Chinchilla_lanigera
ENSBTAG00000006449	REXO5	98	83.398	ENSCSAG00000007562	REXO5	99	83.398	Chlorocebus_sabaeus
ENSBTAG00000006449	REXO5	76	84.848	ENSCHOG00000009146	-	79	84.848	Choloepus_hoffmanni
ENSBTAG00000006449	REXO5	96	48.542	ENSCPBG00000019062	REXO5	98	48.542	Chrysemys_picta_bellii
ENSBTAG00000006449	REXO5	98	82.750	ENSCANG00000035776	REXO5	99	82.750	Colobus_angolensis_palliatus
ENSBTAG00000006449	REXO5	96	71.391	ENSCGRG00001016179	-	98	71.391	Cricetulus_griseus_chok1gshd
ENSBTAG00000006449	REXO5	97	71.129	ENSCGRG00000010868	-	98	71.372	Cricetulus_griseus_crigri
ENSBTAG00000006449	REXO5	93	84.636	ENSEASG00005007266	REXO5	98	87.444	Equus_asinus_asinus
ENSBTAG00000006449	REXO5	98	84.774	ENSECAG00000018769	REXO5	89	84.774	Equus_caballus
ENSBTAG00000006449	REXO5	83	75.146	ENSEEUG00000003572	REXO5	89	75.146	Erinaceus_europaeus
ENSBTAG00000006449	REXO5	98	84.238	ENSFCAG00000015160	REXO5	99	84.238	Felis_catus
ENSBTAG00000006449	REXO5	91	47.574	ENSFALG00000014026	REXO5	99	47.574	Ficedula_albicollis
ENSBTAG00000006449	REXO5	96	31.534	ENSFHEG00000013388	REXO5	99	31.534	Fundulus_heteroclitus
ENSBTAG00000006449	REXO5	92	47.919	ENSGALG00000002239	REXO5	95	47.919	Gallus_gallus
ENSBTAG00000006449	REXO5	77	38.599	ENSGAFG00000011045	REXO5	73	38.599	Gambusia_affinis
ENSBTAG00000006449	REXO5	50	43.250	ENSGACG00000019507	-	85	43.250	Gasterosteus_aculeatus
ENSBTAG00000006449	REXO5	93	49.208	ENSGAGG00000008242	REXO5	95	49.208	Gopherus_agassizii
ENSBTAG00000006449	REXO5	98	82.581	ENSGGOG00000004539	REXO5	99	82.581	Gorilla_gorilla
ENSBTAG00000006449	REXO5	89	36.689	ENSHBUG00000017976	REXO5	92	36.689	Haplochromis_burtoni
ENSBTAG00000006449	REXO5	84	76.541	ENSHGLG00000012652	REXO5	99	76.541	Heterocephalus_glaber_female
ENSBTAG00000006449	REXO5	98	73.368	ENSHGLG00100013255	REXO5	99	76.734	Heterocephalus_glaber_male
ENSBTAG00000006449	REXO5	61	39.014	ENSHCOG00000008648	REXO5	93	37.843	Hippocampus_comes
ENSBTAG00000006449	REXO5	85	74.247	ENSSTOG00000007071	REXO5	97	74.247	Ictidomys_tridecemlineatus
ENSBTAG00000006449	REXO5	92	72.352	ENSJJAG00000023821	-	95	72.352	Jaculus_jaculus
ENSBTAG00000006449	REXO5	93	33.586	ENSKMAG00000009488	REXO5	95	33.586	Kryptolebias_marmoratus
ENSBTAG00000006449	REXO5	97	34.545	ENSLBEG00000009276	REXO5	99	34.545	Labrus_bergylta
ENSBTAG00000006449	REXO5	75	45.950	ENSLACG00000001758	REXO5	100	45.950	Latimeria_chalumnae
ENSBTAG00000006449	REXO5	96	83.400	ENSLAFG00000006157	REXO5	98	83.400	Loxodonta_africana
ENSBTAG00000006449	REXO5	98	83.139	ENSMFAG00000036613	REXO5	99	83.139	Macaca_fascicularis
ENSBTAG00000006449	REXO5	98	83.009	ENSMMUG00000016748	REXO5	99	83.009	Macaca_mulatta
ENSBTAG00000006449	REXO5	98	83.139	ENSMNEG00000045028	REXO5	99	83.139	Macaca_nemestrina
ENSBTAG00000006449	REXO5	98	83.009	ENSMLEG00000029851	REXO5	99	83.009	Mandrillus_leucophaeus
ENSBTAG00000006449	REXO5	91	34.311	ENSMAMG00000006915	REXO5	90	34.311	Mastacembelus_armatus
ENSBTAG00000006449	REXO5	89	36.159	ENSMZEG00005013657	REXO5	92	36.159	Maylandia_zebra
ENSBTAG00000006449	REXO5	92	48.391	ENSMGAG00000010369	REXO5	99	48.391	Meleagris_gallopavo
ENSBTAG00000006449	REXO5	98	86.104	ENSMICG00000014886	REXO5	99	86.104	Microcebus_murinus
ENSBTAG00000006449	REXO5	57	74.382	ENSMOCG00000010062	-	98	74.382	Microtus_ochrogaster
ENSBTAG00000006449	REXO5	98	54.489	ENSMODG00000007059	REXO5	95	54.489	Monodelphis_domestica
ENSBTAG00000006449	REXO5	98	66.276	MGP_CAROLIEiJ_G0030385	-	99	66.276	Mus_caroli
ENSBTAG00000006449	REXO5	98	65.885	ENSMUSG00000030924	Rexo5	98	69.663	Mus_musculus
ENSBTAG00000006449	REXO5	98	66.016	MGP_SPRETEiJ_G0031499	-	99	66.016	Mus_spretus
ENSBTAG00000006449	REXO5	98	85.935	ENSMPUG00000013643	REXO5	99	85.935	Mustela_putorius_furo
ENSBTAG00000006449	REXO5	92	71.685	ENSNGAG00000002025	-	98	74.157	Nannospalax_galili
ENSBTAG00000006449	REXO5	65	37.977	ENSNBRG00000006877	REXO5	81	37.405	Neolamprologus_brichardi
ENSBTAG00000006449	REXO5	98	82.581	ENSNLEG00000012334	REXO5	99	82.581	Nomascus_leucogenys
ENSBTAG00000006449	REXO5	91	54.458	ENSMEUG00000015298	REXO5	99	54.458	Notamacropus_eugenii
ENSBTAG00000006449	REXO5	89	67.658	ENSOPRG00000011398	REXO5	90	67.658	Ochotona_princeps
ENSBTAG00000006449	REXO5	70	41.049	ENSONIG00000000148	REXO5	97	40.741	Oreochromis_niloticus
ENSBTAG00000006449	REXO5	91	54.286	ENSOANG00000014291	REXO5	100	54.286	Ornithorhynchus_anatinus
ENSBTAG00000006449	REXO5	98	80.258	ENSOCUG00000009913	REXO5	99	80.258	Oryctolagus_cuniculus
ENSBTAG00000006449	REXO5	89	35.175	ENSORLG00000009738	REXO5	95	34.555	Oryzias_latipes
ENSBTAG00000006449	REXO5	89	35.819	ENSORLG00020010270	REXO5	95	35.188	Oryzias_latipes_hni
ENSBTAG00000006449	REXO5	89	35.791	ENSORLG00015009678	REXO5	95	35.156	Oryzias_latipes_hsok
ENSBTAG00000006449	REXO5	89	35.326	ENSOMEG00000019491	REXO5	91	35.326	Oryzias_melastigma
ENSBTAG00000006449	REXO5	98	82.581	ENSOGAG00000011564	REXO5	99	82.581	Otolemur_garnettii
ENSBTAG00000006449	REXO5	98	94.293	ENSOARG00000013401	REXO5	100	94.241	Ovis_aries
ENSBTAG00000006449	REXO5	98	82.323	ENSPPAG00000035005	REXO5	99	82.323	Pan_paniscus
ENSBTAG00000006449	REXO5	98	82.101	ENSPPRG00000022345	REXO5	99	82.101	Panthera_pardus
ENSBTAG00000006449	REXO5	98	84.645	ENSPTIG00000012096	REXO5	99	84.645	Panthera_tigris_altaica
ENSBTAG00000006449	REXO5	98	82.323	ENSPTRG00000007851	REXO5	99	82.323	Pan_troglodytes
ENSBTAG00000006449	REXO5	98	83.139	ENSPANG00000006898	REXO5	99	83.139	Papio_anubis
ENSBTAG00000006449	REXO5	89	38.687	ENSPKIG00000014406	REXO5	94	38.687	Paramormyrops_kingsleyae
ENSBTAG00000006449	REXO5	92	48.005	ENSPSIG00000012172	REXO5	94	48.005	Pelodiscus_sinensis
ENSBTAG00000006449	REXO5	96	58.962	ENSPCIG00000029238	-	99	54.465	Phascolarctos_cinereus
ENSBTAG00000006449	REXO5	96	32.603	ENSPFOG00000012767	REXO5	99	32.848	Poecilia_formosa
ENSBTAG00000006449	REXO5	96	32.603	ENSPLAG00000006408	REXO5	99	32.848	Poecilia_latipinna
ENSBTAG00000006449	REXO5	96	32.482	ENSPMEG00000007726	REXO5	99	32.727	Poecilia_mexicana
ENSBTAG00000006449	REXO5	77	38.042	ENSPREG00000000146	REXO5	75	38.042	Poecilia_reticulata
ENSBTAG00000006449	REXO5	98	82.065	ENSPPYG00000007163	REXO5	99	82.065	Pongo_abelii
ENSBTAG00000006449	REXO5	89	78.205	ENSPCAG00000006265	REXO5	100	78.205	Procavia_capensis
ENSBTAG00000006449	REXO5	98	83.506	ENSPCOG00000018775	REXO5	99	83.506	Propithecus_coquereli
ENSBTAG00000006449	REXO5	92	83.242	ENSPVAG00000003293	REXO5	99	83.242	Pteropus_vampyrus
ENSBTAG00000006449	REXO5	70	38.587	ENSPNYG00000006922	REXO5	75	38.587	Pundamilia_nyererei
ENSBTAG00000006449	REXO5	88	36.592	ENSPNAG00000018866	-	91	36.592	Pygocentrus_nattereri
ENSBTAG00000006449	REXO5	95	68.449	ENSRNOG00000014513	Rexo5	98	68.449	Rattus_norvegicus
ENSBTAG00000006449	REXO5	98	82.620	ENSRBIG00000035163	REXO5	89	82.620	Rhinopithecus_bieti
ENSBTAG00000006449	REXO5	98	82.490	ENSRROG00000034741	REXO5	99	82.490	Rhinopithecus_roxellana
ENSBTAG00000006449	REXO5	98	81.395	ENSSBOG00000029650	REXO5	99	83.094	Saimiri_boliviensis_boliviensis
ENSBTAG00000006449	REXO5	97	56.314	ENSSHAG00000005042	REXO5	99	56.314	Sarcophilus_harrisii
ENSBTAG00000006449	REXO5	89	39.112	ENSSFOG00015007581	REXO5	93	39.112	Scleropages_formosus
ENSBTAG00000006449	REXO5	97	33.813	ENSSMAG00000000709	REXO5	99	33.933	Scophthalmus_maximus
ENSBTAG00000006449	REXO5	89	34.204	ENSSDUG00000014528	REXO5	91	34.334	Seriola_dumerili
ENSBTAG00000006449	REXO5	89	33.727	ENSSLDG00000007641	REXO5	90	33.771	Seriola_lalandi_dorsalis
ENSBTAG00000006449	REXO5	98	87.242	ENSSSCG00000007855	REXO5	100	87.242	Sus_scrofa
ENSBTAG00000006449	REXO5	91	48.238	ENSTGUG00000009219	REXO5	99	48.238	Taeniopygia_guttata
ENSBTAG00000006449	REXO5	97	34.140	ENSTRUG00000015295	-	98	34.262	Takifugu_rubripes
ENSBTAG00000006449	REXO5	86	80.469	ENSTBEG00000008797	REXO5	89	80.469	Tupaia_belangeri
ENSBTAG00000006449	REXO5	98	84.935	ENSTTRG00000016439	REXO5	99	84.935	Tursiops_truncatus
ENSBTAG00000006449	REXO5	85	81.737	ENSUAMG00000017756	REXO5	99	81.737	Ursus_americanus
ENSBTAG00000006449	REXO5	98	82.194	ENSVPAG00000003459	REXO5	99	82.194	Vicugna_pacos
ENSBTAG00000006449	REXO5	98	84.536	ENSVVUG00000023257	REXO5	100	84.536	Vulpes_vulpes
ENSBTAG00000006449	REXO5	92	47.325	ENSXETG00000016735	rexo5	99	47.325	Xenopus_tropicalis
ENSBTAG00000006449	REXO5	77	34.069	ENSXCOG00000015997	REXO5	73	34.455	Xiphophorus_couchianus
ENSBTAG00000006449	REXO5	77	38.026	ENSXMAG00000014770	REXO5	75	38.026	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0004527	exonuclease activity	-	IEA	Function
GO:0005730	nucleolus	-	IEA	Component
GO:0090305	nucleic acid phosphodiester bond hydrolysis	-	IEA	Process