EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000006510 (Gene tree)
Gene ID: 512062
Gene Symbol: YRDC
Alias: -
Full Name: yrdC N6-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 5058 bases
Position: chr3:108109004-108114061
Accession: 37038
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000008530	Sua5_yciO_yrdC	PF01300.18	2.8e-44	1	1
ENSBTAP00000058047	Sua5_yciO_yrdC	PF01300.18	2.3e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000085960	-	4100	-	ENSBTAP00000058047	327 (aa)	-	-
ENSBTAT00000008529	-	2810	-	ENSBTAP00000008530	276 (aa)	-	Q0VC80

Gene Model

Click here to download ENSBTAG00000006510's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000006510's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000006510	YRDC	99	88.849	ENSG00000196449	YRDC	99	89.209	Homo_sapiens
ENSBTAG00000006510	YRDC	84	57.447	ENSAPOG00000024293	yrdc	89	57.447	Acanthochromis_polyacanthus
ENSBTAG00000006510	YRDC	67	92.513	ENSAMEG00000001173	YRDC	99	92.513	Ailuropoda_melanoleuca
ENSBTAG00000006510	YRDC	92	57.198	ENSACIG00000017330	yrdc	97	56.489	Amphilophus_citrinellus
ENSBTAG00000006510	YRDC	78	60.731	ENSAOCG00000021647	yrdc	82	60.731	Amphiprion_ocellaris
ENSBTAG00000006510	YRDC	78	60.731	ENSAPEG00000006164	yrdc	82	60.731	Amphiprion_percula
ENSBTAG00000006510	YRDC	83	60.870	ENSATEG00000010086	yrdc	85	60.870	Anabas_testudineus
ENSBTAG00000006510	YRDC	70	67.010	ENSACAG00000017203	YRDC	99	63.810	Anolis_carolinensis
ENSBTAG00000006510	YRDC	97	81.022	ENSANAG00000031052	-	97	81.022	Aotus_nancymaae
ENSBTAG00000006510	YRDC	83	87.013	ENSANAG00000028788	-	97	87.013	Aotus_nancymaae
ENSBTAG00000006510	YRDC	93	53.668	ENSACLG00000027775	yrdc	96	53.668	Astatotilapia_calliptera
ENSBTAG00000006510	YRDC	84	58.190	ENSAMXG00000037791	yrdc	85	59.524	Astyanax_mexicanus
ENSBTAG00000006510	YRDC	83	39.056	WBGene00012997	Y48C3A.18	98	38.095	Caenorhabditis_elegans
ENSBTAG00000006510	YRDC	99	88.849	ENSCJAG00000002078	YRDC	76	88.849	Callithrix_jacchus
ENSBTAG00000006510	YRDC	99	82.545	ENSCAFG00000003253	YRDC	99	82.545	Canis_familiaris
ENSBTAG00000006510	YRDC	99	84.727	ENSCAFG00020007843	YRDC	99	84.727	Canis_lupus_dingo
ENSBTAG00000006510	YRDC	99	96.000	ENSCHIG00000007882	YRDC	99	96.000	Capra_hircus
ENSBTAG00000006510	YRDC	64	91.525	ENSTSYG00000005555	YRDC	63	91.525	Carlito_syrichta
ENSBTAG00000006510	YRDC	99	86.331	ENSCPOG00000036144	YRDC	99	86.331	Cavia_porcellus
ENSBTAG00000006510	YRDC	99	88.489	ENSCCAG00000028891	YRDC	99	88.489	Cebus_capucinus
ENSBTAG00000006510	YRDC	99	87.770	ENSCATG00000036928	YRDC	99	88.129	Cercocebus_atys
ENSBTAG00000006510	YRDC	99	86.691	ENSCLAG00000015012	YRDC	99	87.050	Chinchilla_lanigera
ENSBTAG00000006510	YRDC	99	87.410	ENSCSAG00000001116	YRDC	99	87.770	Chlorocebus_sabaeus
ENSBTAG00000006510	YRDC	75	84.211	ENSCHOG00000005500	YRDC	93	84.103	Choloepus_hoffmanni
ENSBTAG00000006510	YRDC	75	67.150	ENSCPBG00000018446	YRDC	88	67.150	Chrysemys_picta_bellii
ENSBTAG00000006510	YRDC	74	47.887	ENSCING00000007564	-	98	47.887	Ciona_intestinalis
ENSBTAG00000006510	YRDC	74	47.393	ENSCSAVG00000009982	-	98	47.393	Ciona_savignyi
ENSBTAG00000006510	YRDC	99	87.410	ENSCANG00000031111	YRDC	99	87.770	Colobus_angolensis_palliatus
ENSBTAG00000006510	YRDC	99	84.588	ENSCGRG00001014496	-	99	85.305	Cricetulus_griseus_chok1gshd
ENSBTAG00000006510	YRDC	99	78.261	ENSCGRG00001000829	-	77	78.623	Cricetulus_griseus_chok1gshd
ENSBTAG00000006510	YRDC	97	52.727	ENSCSEG00000019075	yrdc	98	52.727	Cynoglossus_semilaevis
ENSBTAG00000006510	YRDC	88	55.061	ENSCVAG00000017355	yrdc	92	55.061	Cyprinodon_variegatus
ENSBTAG00000006510	YRDC	95	53.903	ENSDARG00000041428	yrdc	97	57.872	Danio_rerio
ENSBTAG00000006510	YRDC	99	87.097	ENSDNOG00000038789	-	100	88.281	Dasypus_novemcinctus
ENSBTAG00000006510	YRDC	69	64.249	ENSDNOG00000036198	-	97	63.500	Dasypus_novemcinctus
ENSBTAG00000006510	YRDC	99	73.551	ENSDORG00000008788	Yrdc	99	73.551	Dipodomys_ordii
ENSBTAG00000006510	YRDC	73	47.317	FBgn0061361	CG33786	82	47.317	Drosophila_melanogaster
ENSBTAG00000006510	YRDC	99	73.477	ENSETEG00000003442	YRDC	99	73.477	Echinops_telfairi
ENSBTAG00000006510	YRDC	83	52.174	ENSEBUG00000014080	yrdc	95	52.174	Eptatretus_burgeri
ENSBTAG00000006510	YRDC	99	90.323	ENSEASG00005012253	YRDC	99	90.681	Equus_asinus_asinus
ENSBTAG00000006510	YRDC	99	90.681	ENSECAG00000022522	YRDC	99	91.039	Equus_caballus
ENSBTAG00000006510	YRDC	78	61.468	ENSELUG00000018071	yrdc	71	61.468	Esox_lucius
ENSBTAG00000006510	YRDC	99	89.964	ENSFCAG00000011018	YRDC	99	90.323	Felis_catus
ENSBTAG00000006510	YRDC	69	72.251	ENSFALG00000000964	YRDC	89	71.282	Ficedula_albicollis
ENSBTAG00000006510	YRDC	69	30.918	ENSFALG00000011333	-	53	30.332	Ficedula_albicollis
ENSBTAG00000006510	YRDC	96	53.731	ENSFHEG00000001029	yrdc	98	54.839	Fundulus_heteroclitus
ENSBTAG00000006510	YRDC	74	64.216	ENSGMOG00000015635	yrdc	97	64.216	Gadus_morhua
ENSBTAG00000006510	YRDC	70	32.039	ENSGALG00000025899	-	67	31.604	Gallus_gallus
ENSBTAG00000006510	YRDC	89	65.587	ENSGALG00000029001	YRDC	95	65.587	Gallus_gallus
ENSBTAG00000006510	YRDC	92	54.264	ENSGAFG00000008396	yrdc	95	54.264	Gambusia_affinis
ENSBTAG00000006510	YRDC	82	58.621	ENSGACG00000013878	yrdc	95	58.621	Gasterosteus_aculeatus
ENSBTAG00000006510	YRDC	83	66.087	ENSGAGG00000014968	YRDC	99	65.801	Gopherus_agassizii
ENSBTAG00000006510	YRDC	99	88.849	ENSGGOG00000007619	YRDC	99	89.209	Gorilla_gorilla
ENSBTAG00000006510	YRDC	93	54.054	ENSHBUG00000009298	yrdc	96	54.054	Haplochromis_burtoni
ENSBTAG00000006510	YRDC	99	87.770	ENSHGLG00000014075	YRDC	99	87.770	Heterocephalus_glaber_female
ENSBTAG00000006510	YRDC	99	79.636	ENSHGLG00100002734	YRDC	99	79.636	Heterocephalus_glaber_male
ENSBTAG00000006510	YRDC	82	57.965	ENSHCOG00000006598	yrdc	88	57.965	Hippocampus_comes
ENSBTAG00000006510	YRDC	74	63.415	ENSIPUG00000014985	yrdc	92	59.912	Ictalurus_punctatus
ENSBTAG00000006510	YRDC	99	88.889	ENSSTOG00000001643	YRDC	99	88.889	Ictidomys_tridecemlineatus
ENSBTAG00000006510	YRDC	91	56.693	ENSKMAG00000013468	yrdc	94	56.693	Kryptolebias_marmoratus
ENSBTAG00000006510	YRDC	94	55.303	ENSLBEG00000027501	yrdc	97	55.303	Labrus_bergylta
ENSBTAG00000006510	YRDC	84	62.083	ENSLACG00000010689	YRDC	98	65.728	Latimeria_chalumnae
ENSBTAG00000006510	YRDC	69	31.754	ENSLACG00000017624	si:ch211-153b23.3	61	31.754	Latimeria_chalumnae
ENSBTAG00000006510	YRDC	76	64.151	ENSLOCG00000003321	yrdc	87	64.151	Lepisosteus_oculatus
ENSBTAG00000006510	YRDC	99	88.889	ENSLAFG00000017556	YRDC	99	88.889	Loxodonta_africana
ENSBTAG00000006510	YRDC	76	91.905	ENSMFAG00000003487	YRDC	99	91.905	Macaca_fascicularis
ENSBTAG00000006510	YRDC	99	87.770	ENSMMUG00000005372	YRDC	74	88.129	Macaca_mulatta
ENSBTAG00000006510	YRDC	99	87.770	ENSMNEG00000029348	YRDC	99	88.129	Macaca_nemestrina
ENSBTAG00000006510	YRDC	54	91.946	ENSMLEG00000041122	YRDC	99	91.946	Mandrillus_leucophaeus
ENSBTAG00000006510	YRDC	88	56.911	ENSMAMG00000007315	yrdc	90	56.911	Mastacembelus_armatus
ENSBTAG00000006510	YRDC	93	53.668	ENSMZEG00005006948	yrdc	96	53.668	Maylandia_zebra
ENSBTAG00000006510	YRDC	69	32.212	ENSMGAG00000005489	-	52	32.212	Meleagris_gallopavo
ENSBTAG00000006510	YRDC	73	70.792	ENSMGAG00000002833	YRDC	99	70.792	Meleagris_gallopavo
ENSBTAG00000006510	YRDC	99	89.247	ENSMICG00000031688	YRDC	100	89.606	Microcebus_murinus
ENSBTAG00000006510	YRDC	75	83.732	ENSMOCG00000000164	-	83	84.112	Microtus_ochrogaster
ENSBTAG00000006510	YRDC	84	58.120	ENSMMOG00000002119	yrdc	86	58.120	Mola_mola
ENSBTAG00000006510	YRDC	99	71.228	ENSMODG00000017750	YRDC	99	71.228	Monodelphis_domestica
ENSBTAG00000006510	YRDC	89	57.490	ENSMALG00000012471	yrdc	92	57.490	Monopterus_albus
ENSBTAG00000006510	YRDC	99	79.570	MGP_CAROLIEiJ_G0026453	Yrdc	98	95.146	Mus_caroli
ENSBTAG00000006510	YRDC	99	83.871	ENSMUSG00000028889	Yrdc	100	94.286	Mus_musculus
ENSBTAG00000006510	YRDC	99	83.513	MGP_PahariEiJ_G0028784	Yrdc	100	93.333	Mus_pahari
ENSBTAG00000006510	YRDC	99	84.229	MGP_SPRETEiJ_G0027432	Yrdc	99	84.229	Mus_spretus
ENSBTAG00000006510	YRDC	90	82.000	ENSMPUG00000014542	YRDC	100	82.000	Mustela_putorius_furo
ENSBTAG00000006510	YRDC	98	87.226	ENSMLUG00000000955	-	98	87.226	Myotis_lucifugus
ENSBTAG00000006510	YRDC	98	65.934	ENSMLUG00000028796	-	97	65.934	Myotis_lucifugus
ENSBTAG00000006510	YRDC	70	82.564	ENSMLUG00000024310	-	96	82.564	Myotis_lucifugus
ENSBTAG00000006510	YRDC	99	81.362	ENSNGAG00000019099	Yrdc	99	81.362	Nannospalax_galili
ENSBTAG00000006510	YRDC	93	54.054	ENSNBRG00000009475	yrdc	98	53.409	Neolamprologus_brichardi
ENSBTAG00000006510	YRDC	99	88.849	ENSNLEG00000011665	YRDC	99	89.209	Nomascus_leucogenys
ENSBTAG00000006510	YRDC	77	82.710	ENSMEUG00000005068	YRDC	99	82.710	Notamacropus_eugenii
ENSBTAG00000006510	YRDC	99	88.448	ENSODEG00000007401	YRDC	100	92.381	Octodon_degus
ENSBTAG00000006510	YRDC	82	58.772	ENSONIG00000016213	yrdc	95	58.772	Oreochromis_niloticus
ENSBTAG00000006510	YRDC	99	90.323	ENSOCUG00000005384	YRDC	95	90.681	Oryctolagus_cuniculus
ENSBTAG00000006510	YRDC	82	56.466	ENSORLG00000014393	yrdc	86	56.466	Oryzias_latipes
ENSBTAG00000006510	YRDC	82	56.522	ENSORLG00020019663	yrdc	86	56.522	Oryzias_latipes_hni
ENSBTAG00000006510	YRDC	82	56.957	ENSORLG00015004625	yrdc	86	56.957	Oryzias_latipes_hsok
ENSBTAG00000006510	YRDC	82	57.456	ENSOMEG00000018550	yrdc	86	57.456	Oryzias_melastigma
ENSBTAG00000006510	YRDC	99	86.232	ENSOGAG00000030474	YRDC	100	86.232	Otolemur_garnettii
ENSBTAG00000006510	YRDC	93	94.942	ENSOARG00000019873	YRDC	97	90.876	Ovis_aries
ENSBTAG00000006510	YRDC	53	93.197	ENSPPAG00000039722	-	99	93.197	Pan_paniscus
ENSBTAG00000006510	YRDC	99	90.323	ENSPPRG00000007752	YRDC	99	90.681	Panthera_pardus
ENSBTAG00000006510	YRDC	88	64.898	ENSPTIG00000019821	YRDC	99	64.898	Panthera_tigris_altaica
ENSBTAG00000006510	YRDC	99	88.489	ENSPTRG00000000557	YRDC	99	88.849	Pan_troglodytes
ENSBTAG00000006510	YRDC	99	87.770	ENSPANG00000006487	YRDC	75	88.129	Papio_anubis
ENSBTAG00000006510	YRDC	73	65.025	ENSPKIG00000004574	yrdc	74	65.025	Paramormyrops_kingsleyae
ENSBTAG00000006510	YRDC	96	56.204	ENSPSIG00000006483	YRDC	94	56.204	Pelodiscus_sinensis
ENSBTAG00000006510	YRDC	82	57.522	ENSPMGG00000004184	yrdc	86	57.522	Periophthalmus_magnuspinnatus
ENSBTAG00000006510	YRDC	65	87.778	ENSPEMG00000016985	Yrdc	93	75.000	Peromyscus_maniculatus_bairdii
ENSBTAG00000006510	YRDC	64	56.742	ENSPMAG00000002905	yrdc	96	56.742	Petromyzon_marinus
ENSBTAG00000006510	YRDC	93	75.472	ENSPCIG00000025731	YRDC	96	75.092	Phascolarctos_cinereus
ENSBTAG00000006510	YRDC	92	55.039	ENSPFOG00000023097	yrdc	95	55.039	Poecilia_formosa
ENSBTAG00000006510	YRDC	92	54.651	ENSPLAG00000020882	yrdc	95	54.651	Poecilia_latipinna
ENSBTAG00000006510	YRDC	92	55.039	ENSPMEG00000013237	yrdc	96	55.039	Poecilia_mexicana
ENSBTAG00000006510	YRDC	92	54.651	ENSPREG00000005285	yrdc	95	54.651	Poecilia_reticulata
ENSBTAG00000006510	YRDC	86	88.235	ENSPPYG00000001523	-	98	88.235	Pongo_abelii
ENSBTAG00000006510	YRDC	99	84.477	ENSPCAG00000016850	YRDC	99	84.477	Procavia_capensis
ENSBTAG00000006510	YRDC	99	87.814	ENSPCOG00000013214	YRDC	99	88.172	Propithecus_coquereli
ENSBTAG00000006510	YRDC	99	90.217	ENSPVAG00000010147	YRDC	99	90.217	Pteropus_vampyrus
ENSBTAG00000006510	YRDC	93	54.054	ENSPNYG00000013956	yrdc	96	54.054	Pundamilia_nyererei
ENSBTAG00000006510	YRDC	76	59.716	ENSPNAG00000015625	yrdc	86	59.716	Pygocentrus_nattereri
ENSBTAG00000006510	YRDC	99	83.154	ENSRNOG00000025424	Yrdc	99	84.946	Rattus_norvegicus
ENSBTAG00000006510	YRDC	99	87.770	ENSRBIG00000032289	YRDC	99	88.129	Rhinopithecus_bieti
ENSBTAG00000006510	YRDC	75	92.344	ENSRROG00000039370	YRDC	71	92.344	Rhinopithecus_roxellana
ENSBTAG00000006510	YRDC	84	83.621	ENSSBOG00000018937	YRDC	93	83.621	Saimiri_boliviensis_boliviensis
ENSBTAG00000006510	YRDC	53	81.081	ENSSHAG00000013957	-	100	81.081	Sarcophilus_harrisii
ENSBTAG00000006510	YRDC	74	64.563	ENSSFOG00015006128	yrdc	88	64.563	Scleropages_formosus
ENSBTAG00000006510	YRDC	86	57.983	ENSSMAG00000005195	yrdc	94	56.349	Scophthalmus_maximus
ENSBTAG00000006510	YRDC	66	30.000	ENSSDUG00000006736	-	63	30.147	Seriola_dumerili
ENSBTAG00000006510	YRDC	95	54.545	ENSSDUG00000009775	yrdc	98	54.545	Seriola_dumerili
ENSBTAG00000006510	YRDC	95	54.545	ENSSLDG00000003196	yrdc	98	54.545	Seriola_lalandi_dorsalis
ENSBTAG00000006510	YRDC	85	62.128	ENSSPUG00000003946	YRDC	88	62.128	Sphenodon_punctatus
ENSBTAG00000006510	YRDC	84	55.556	ENSSPAG00000012559	yrdc	87	55.556	Stegastes_partitus
ENSBTAG00000006510	YRDC	99	91.367	ENSSSCG00000040425	YRDC	99	91.727	Sus_scrofa
ENSBTAG00000006510	YRDC	52	77.778	ENSTGUG00000001507	YRDC	98	77.778	Taeniopygia_guttata
ENSBTAG00000006510	YRDC	97	48.134	ENSTRUG00000005923	yrdc	95	50.746	Takifugu_rubripes
ENSBTAG00000006510	YRDC	57	91.139	ENSTBEG00000008863	YRDC	100	91.139	Tupaia_belangeri
ENSBTAG00000006510	YRDC	53	91.837	ENSTTRG00000013538	-	99	91.837	Tursiops_truncatus
ENSBTAG00000006510	YRDC	73	93.103	ENSUAMG00000006150	YRDC	100	93.103	Ursus_americanus
ENSBTAG00000006510	YRDC	84	75.641	ENSVPAG00000006642	YRDC	100	75.641	Vicugna_pacos
ENSBTAG00000006510	YRDC	54	86.755	ENSVVUG00000023132	-	50	86.755	Vulpes_vulpes
ENSBTAG00000006510	YRDC	83	64.224	ENSXETG00000014420	yrdc	97	64.224	Xenopus_tropicalis
ENSBTAG00000006510	YRDC	83	56.277	ENSXCOG00000000829	yrdc	95	54.113	Xiphophorus_couchianus
ENSBTAG00000006510	YRDC	92	53.101	ENSXMAG00000014606	yrdc	90	53.101	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003725	double-stranded RNA binding	-	IEA	Function
GO:0005739	mitochondrion	-	IEA	Component
GO:0016020	membrane	-	IEA	Component