EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000006548 (Gene tree)
Gene ID: 513504
Gene Symbol: MCCC1
Alias: -
Full Name: Bos taurus methylcrotonoyl-CoA carboxylase 1 (MCCC1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 58672 bases
Position: chr1:83960686-84019357
Accession: NM_001205758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000071805	RimK	PF08443.11	6.8e-06	1	1
ENSBTAP00000059574	RimK	PF08443.11	6.8e-06	1	1
ENSBTAP00000059691	RimK	PF08443.11	7.3e-06	1	1
ENSBTAP00000062468	RimK	PF08443.11	7.4e-06	1	1
ENSBTAP00000008604	RimK	PF08443.11	7.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000070998	-	2309	-	ENSBTAP00000059574	701 (aa)	-	-
ENSBTAT00000072364	-	2315	-	ENSBTAP00000071805	703 (aa)	-	-
ENSBTAT00000008604	-	2453	-	ENSBTAP00000008604	749 (aa)	-	E1BGC1
ENSBTAT00000068793	-	2504	-	ENSBTAP00000059691	725 (aa)	-	UPI0000EBC1D9
ENSBTAT00000069841	-	2175	-	ENSBTAP00000062468	724 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000006548's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta00280	Valine, leucine and isoleucine degradation	KEGG
bta01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000006548's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000006548	MCCC1	96	38.338	ENSBTAG00000010672	PCCA	99	38.196

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000006548	MCCC1	100	88.414	ENSG00000078070	MCCC1	98	93.882	Homo_sapiens
ENSBTAG00000006548	MCCC1	100	89.655	ENSAMEG00000015967	MCCC1	100	89.655	Ailuropoda_melanoleuca
ENSBTAG00000006548	MCCC1	76	69.653	ENSACIG00000023146	mccc1	96	81.647	Amphilophus_citrinellus
ENSBTAG00000006548	MCCC1	96	79.053	ENSAPLG00000008989	MCCC1	97	79.137	Anas_platyrhynchos
ENSBTAG00000006548	MCCC1	98	86.498	ENSANAG00000028235	MCCC1	99	91.355	Aotus_nancymaae
ENSBTAG00000006548	MCCC1	94	72.271	ENSACLG00000026110	mccc1	98	73.433	Astatotilapia_calliptera
ENSBTAG00000006548	MCCC1	94	73.746	ENSAMXG00000001531	mccc1	96	73.939	Astyanax_mexicanus
ENSBTAG00000006548	MCCC1	98	83.454	ENSCJAG00000005103	MCCC1	99	91.121	Callithrix_jacchus
ENSBTAG00000006548	MCCC1	98	90.155	ENSCAFG00000011749	MCCC1	100	89.931	Canis_familiaris
ENSBTAG00000006548	MCCC1	98	90.155	ENSCAFG00020001000	MCCC1	100	89.931	Canis_lupus_dingo
ENSBTAG00000006548	MCCC1	100	97.103	ENSCHIG00000025794	MCCC1	99	95.603	Capra_hircus
ENSBTAG00000006548	MCCC1	100	86.759	ENSTSYG00000012606	MCCC1	99	93.224	Carlito_syrichta
ENSBTAG00000006548	MCCC1	94	80.669	ENSCAPG00000012269	MCCC1	99	80.669	Cavia_aperea
ENSBTAG00000006548	MCCC1	100	81.379	ENSCPOG00000010866	MCCC1	100	81.379	Cavia_porcellus
ENSBTAG00000006548	MCCC1	100	87.862	ENSCATG00000037699	MCCC1	99	93.458	Cercocebus_atys
ENSBTAG00000006548	MCCC1	81	82.003	ENSCLAG00000014174	MCCC1	100	81.758	Chinchilla_lanigera
ENSBTAG00000006548	MCCC1	100	88.966	ENSCSAG00000013226	MCCC1	100	88.966	Chlorocebus_sabaeus
ENSBTAG00000006548	MCCC1	95	80.233	ENSCPBG00000000534	MCCC1	96	80.233	Chrysemys_picta_bellii
ENSBTAG00000006548	MCCC1	96	55.509	ENSCING00000019260	-	98	55.509	Ciona_intestinalis
ENSBTAG00000006548	MCCC1	92	56.808	ENSCING00000020099	-	99	56.515	Ciona_intestinalis
ENSBTAG00000006548	MCCC1	92	56.306	ENSCSAVG00000007062	-	99	54.073	Ciona_savignyi
ENSBTAG00000006548	MCCC1	85	88.636	ENSCANG00000037917	MCCC1	98	95.174	Colobus_angolensis_palliatus
ENSBTAG00000006548	MCCC1	96	85.387	ENSCGRG00001012469	Mccc1	100	84.050	Cricetulus_griseus_chok1gshd
ENSBTAG00000006548	MCCC1	95	86.026	ENSCGRG00000002616	Mccc1	100	83.495	Cricetulus_griseus_crigri
ENSBTAG00000006548	MCCC1	94	72.621	ENSCSEG00000019501	mccc1	95	72.424	Cynoglossus_semilaevis
ENSBTAG00000006548	MCCC1	94	74.194	ENSDARG00000102538	mccc1	97	73.593	Danio_rerio
ENSBTAG00000006548	MCCC1	100	87.912	ENSDNOG00000012070	MCCC1	100	87.912	Dasypus_novemcinctus
ENSBTAG00000006548	MCCC1	99	87.500	ENSDORG00000000473	Mccc1	99	87.500	Dipodomys_ordii
ENSBTAG00000006548	MCCC1	99	79.750	ENSETEG00000008384	MCCC1	99	79.750	Echinops_telfairi
ENSBTAG00000006548	MCCC1	57	74.627	ENSEBUG00000016250	-	97	73.123	Eptatretus_burgeri
ENSBTAG00000006548	MCCC1	100	89.779	ENSEASG00005015339	MCCC1	100	95.300	Equus_asinus_asinus
ENSBTAG00000006548	MCCC1	100	89.931	ENSECAG00000008214	MCCC1	100	89.931	Equus_caballus
ENSBTAG00000006548	MCCC1	96	72.190	ENSEEUG00000011233	MCCC1	99	72.190	Erinaceus_europaeus
ENSBTAG00000006548	MCCC1	93	73.778	ENSELUG00000010299	mccc1	99	74.963	Esox_lucius
ENSBTAG00000006548	MCCC1	85	91.234	ENSFCAG00000000940	MCCC1	97	94.537	Felis_catus
ENSBTAG00000006548	MCCC1	96	79.683	ENSFALG00000008252	MCCC1	97	79.683	Ficedula_albicollis
ENSBTAG00000006548	MCCC1	98	78.792	ENSFDAG00000009183	MCCC1	99	78.611	Fukomys_damarensis
ENSBTAG00000006548	MCCC1	95	69.754	ENSGMOG00000008521	mccc1	99	69.754	Gadus_morhua
ENSBTAG00000006548	MCCC1	98	77.191	ENSGALG00000008785	MCCC1	94	77.191	Gallus_gallus
ENSBTAG00000006548	MCCC1	94	72.500	ENSGAFG00000010643	mccc1	97	72.214	Gambusia_affinis
ENSBTAG00000006548	MCCC1	90	81.498	ENSGAGG00000000770	MCCC1	99	81.498	Gopherus_agassizii
ENSBTAG00000006548	MCCC1	100	88.690	ENSGGOG00000002784	MCCC1	98	94.588	Gorilla_gorilla
ENSBTAG00000006548	MCCC1	94	72.271	ENSHBUG00000000956	mccc1	96	72.157	Haplochromis_burtoni
ENSBTAG00000006548	MCCC1	99	83.817	ENSHGLG00000014650	MCCC1	99	83.817	Heterocephalus_glaber_female
ENSBTAG00000006548	MCCC1	99	83.817	ENSHGLG00100015295	MCCC1	99	83.817	Heterocephalus_glaber_male
ENSBTAG00000006548	MCCC1	92	72.139	ENSHCOG00000010503	mccc1	99	71.598	Hippocampus_comes
ENSBTAG00000006548	MCCC1	94	73.490	ENSIPUG00000024615	mccc1	97	72.938	Ictalurus_punctatus
ENSBTAG00000006548	MCCC1	98	88.169	ENSSTOG00000010361	MCCC1	99	87.845	Ictidomys_tridecemlineatus
ENSBTAG00000006548	MCCC1	97	82.361	ENSJJAG00000003543	Mccc1	99	82.123	Jaculus_jaculus
ENSBTAG00000006548	MCCC1	91	73.374	ENSLBEG00000001741	mccc1	91	73.393	Labrus_bergylta
ENSBTAG00000006548	MCCC1	95	77.358	ENSLACG00000018119	MCCC1	96	77.358	Latimeria_chalumnae
ENSBTAG00000006548	MCCC1	95	67.335	ENSLOCG00000000778	mccc1	96	67.335	Lepisosteus_oculatus
ENSBTAG00000006548	MCCC1	99	86.611	ENSLAFG00000018018	MCCC1	100	86.611	Loxodonta_africana
ENSBTAG00000006548	MCCC1	100	88.966	ENSMFAG00000000043	MCCC1	99	93.925	Macaca_fascicularis
ENSBTAG00000006548	MCCC1	85	89.610	ENSMMUG00000010553	MCCC1	99	93.692	Macaca_mulatta
ENSBTAG00000006548	MCCC1	100	85.103	ENSMNEG00000017163	MCCC1	100	89.610	Macaca_nemestrina
ENSBTAG00000006548	MCCC1	100	85.655	ENSMLEG00000039351	MCCC1	99	93.458	Mandrillus_leucophaeus
ENSBTAG00000006548	MCCC1	94	72.271	ENSMZEG00005015532	mccc1	96	72.157	Maylandia_zebra
ENSBTAG00000006548	MCCC1	96	79.107	ENSMGAG00000009494	MCCC1	100	79.107	Meleagris_gallopavo
ENSBTAG00000006548	MCCC1	100	87.172	ENSMICG00000048884	MCCC1	98	92.689	Microcebus_murinus
ENSBTAG00000006548	MCCC1	97	82.603	ENSMOCG00000003671	Mccc1	100	81.692	Microtus_ochrogaster
ENSBTAG00000006548	MCCC1	99	81.502	ENSMODG00000021288	MCCC1	99	81.502	Monodelphis_domestica
ENSBTAG00000006548	MCCC1	98	84.724	MGP_CAROLIEiJ_G0024932	Mccc1	99	84.314	Mus_caroli
ENSBTAG00000006548	MCCC1	98	84.583	ENSMUSG00000027709	Mccc1	99	84.174	Mus_musculus
ENSBTAG00000006548	MCCC1	98	84.583	MGP_SPRETEiJ_G0025866	Mccc1	99	84.174	Mus_spretus
ENSBTAG00000006548	MCCC1	96	89.928	ENSMPUG00000002371	MCCC1	87	90.043	Mustela_putorius_furo
ENSBTAG00000006548	MCCC1	99	88.951	ENSMLUG00000012257	MCCC1	99	88.951	Myotis_lucifugus
ENSBTAG00000006548	MCCC1	96	87.518	ENSNGAG00000001216	Mccc1	98	87.966	Nannospalax_galili
ENSBTAG00000006548	MCCC1	100	87.017	ENSNLEG00000005989	MCCC1	98	93.882	Nomascus_leucogenys
ENSBTAG00000006548	MCCC1	98	80.337	ENSOPRG00000007258	MCCC1	100	80.028	Ochotona_princeps
ENSBTAG00000006548	MCCC1	99	82.410	ENSODEG00000012286	MCCC1	100	82.410	Octodon_degus
ENSBTAG00000006548	MCCC1	94	72.124	ENSONIG00000008395	mccc1	96	72.012	Oreochromis_niloticus
ENSBTAG00000006548	MCCC1	91	83.005	ENSOANG00000011253	MCCC1	100	83.005	Ornithorhynchus_anatinus
ENSBTAG00000006548	MCCC1	100	81.655	ENSOCUG00000012393	MCCC1	100	81.655	Oryctolagus_cuniculus
ENSBTAG00000006548	MCCC1	95	70.767	ENSORLG00000011678	mccc1	99	71.056	Oryzias_latipes
ENSBTAG00000006548	MCCC1	95	70.725	ENSORLG00020005680	mccc1	99	70.851	Oryzias_latipes_hni
ENSBTAG00000006548	MCCC1	92	72.372	ENSORLG00015003526	mccc1	97	72.148	Oryzias_latipes_hsok
ENSBTAG00000006548	MCCC1	95	70.640	ENSOMEG00000011470	mccc1	98	70.386	Oryzias_melastigma
ENSBTAG00000006548	MCCC1	90	87.003	ENSOGAG00000000659	MCCC1	100	87.003	Otolemur_garnettii
ENSBTAG00000006548	MCCC1	96	97.126	ENSOARG00000020660	MCCC1	100	97.126	Ovis_aries
ENSBTAG00000006548	MCCC1	100	88.276	ENSPPAG00000036167	MCCC1	98	93.882	Pan_paniscus
ENSBTAG00000006548	MCCC1	85	91.071	ENSPPRG00000000127	MCCC1	97	94.299	Panthera_pardus
ENSBTAG00000006548	MCCC1	100	89.241	ENSPTIG00000018514	MCCC1	97	93.587	Panthera_tigris_altaica
ENSBTAG00000006548	MCCC1	100	88.138	ENSPTRG00000015662	MCCC1	98	94.118	Pan_troglodytes
ENSBTAG00000006548	MCCC1	100	88.966	ENSPANG00000006870	MCCC1	99	93.692	Papio_anubis
ENSBTAG00000006548	MCCC1	95	78.261	ENSPSIG00000017510	MCCC1	99	78.899	Pelodiscus_sinensis
ENSBTAG00000006548	MCCC1	91	68.986	ENSPMGG00000000155	mccc1	97	68.703	Periophthalmus_magnuspinnatus
ENSBTAG00000006548	MCCC1	98	84.831	ENSPEMG00000014164	Mccc1	99	84.831	Peromyscus_maniculatus_bairdii
ENSBTAG00000006548	MCCC1	99	81.894	ENSPCIG00000013027	MCCC1	84	81.894	Phascolarctos_cinereus
ENSBTAG00000006548	MCCC1	94	72.459	ENSPFOG00000019171	mccc1	96	72.222	Poecilia_formosa
ENSBTAG00000006548	MCCC1	94	72.312	ENSPLAG00000022735	mccc1	96	71.884	Poecilia_latipinna
ENSBTAG00000006548	MCCC1	94	72.312	ENSPMEG00000000664	mccc1	96	71.884	Poecilia_mexicana
ENSBTAG00000006548	MCCC1	100	88.414	ENSPPYG00000014331	MCCC1	100	88.414	Pongo_abelii
ENSBTAG00000006548	MCCC1	98	75.211	ENSPCAG00000003195	MCCC1	99	75.035	Procavia_capensis
ENSBTAG00000006548	MCCC1	100	88.000	ENSPCOG00000020095	MCCC1	98	92.453	Propithecus_coquereli
ENSBTAG00000006548	MCCC1	98	85.493	ENSPVAG00000013436	MCCC1	99	85.493	Pteropus_vampyrus
ENSBTAG00000006548	MCCC1	94	68.182	ENSPNAG00000025069	mccc1	97	68.960	Pygocentrus_nattereri
ENSBTAG00000006548	MCCC1	97	84.801	ENSRNOG00000013293	Mccc1	99	84.388	Rattus_norvegicus
ENSBTAG00000006548	MCCC1	100	88.552	ENSRBIG00000038726	MCCC1	98	94.353	Rhinopithecus_bieti
ENSBTAG00000006548	MCCC1	100	88.414	ENSRROG00000041247	MCCC1	98	94.118	Rhinopithecus_roxellana
ENSBTAG00000006548	MCCC1	91	86.989	ENSSBOG00000026219	MCCC1	99	92.637	Saimiri_boliviensis_boliviensis
ENSBTAG00000006548	MCCC1	95	81.753	ENSSHAG00000016104	MCCC1	99	81.844	Sarcophilus_harrisii
ENSBTAG00000006548	MCCC1	94	73.862	ENSSFOG00015007784	mccc1	97	73.799	Scleropages_formosus
ENSBTAG00000006548	MCCC1	94	71.765	ENSSMAG00000019667	mccc1	97	71.284	Scophthalmus_maximus
ENSBTAG00000006548	MCCC1	91	78.995	ENSSPUG00000014366	MCCC1	99	78.995	Sphenodon_punctatus
ENSBTAG00000006548	MCCC1	93	71.893	ENSSPAG00000011206	mccc1	97	71.676	Stegastes_partitus
ENSBTAG00000006548	MCCC1	99	88.252	ENSSSCG00000025942	MCCC1	99	89.438	Sus_scrofa
ENSBTAG00000006548	MCCC1	93	80.502	ENSTGUG00000010506	MCCC1	100	80.502	Taeniopygia_guttata
ENSBTAG00000006548	MCCC1	93	81.073	ENSTBEG00000007988	MCCC1	99	81.073	Tupaia_belangeri
ENSBTAG00000006548	MCCC1	100	93.379	ENSTTRG00000016518	MCCC1	100	93.379	Tursiops_truncatus
ENSBTAG00000006548	MCCC1	66	91.793	ENSUAMG00000008378	MCCC1	98	93.720	Ursus_americanus
ENSBTAG00000006548	MCCC1	100	90.069	ENSUMAG00000006927	MCCC1	100	90.069	Ursus_maritimus
ENSBTAG00000006548	MCCC1	98	89.374	ENSVVUG00000006835	MCCC1	100	89.158	Vulpes_vulpes
ENSBTAG00000006548	MCCC1	96	76.868	ENSXETG00000016826	mccc1	97	76.868	Xenopus_tropicalis