EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000006727 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 4412 bases
Position: chr22:25346897-25351308
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000060686	RRM_1	PF00076.22	8.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000008843	-	495	-	ENSBTAP00000060686	164 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000006727's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000006727's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000006727	-	85	56.835	ENSBTAG00000050594	-	57	55.479
ENSBTAG00000006727	-	85	59.859	ENSBTAG00000053753	-	54	54.795

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000006727	-	86	78.723	ENSG00000205022	PABPN1L	51	78.723	Homo_sapiens
ENSBTAG00000006727	-	65	66.038	ENSACIG00000021400	PABPN1L	59	66.038	Amphilophus_citrinellus
ENSBTAG00000006727	-	96	63.354	ENSACAG00000013250	PABPN1L	87	63.354	Anolis_carolinensis
ENSBTAG00000006727	-	86	74.468	ENSANAG00000038178	PABPN1L	51	74.468	Aotus_nancymaae
ENSBTAG00000006727	-	85	76.978	ENSCPOG00000025951	PABPN1L	51	76.978	Cavia_porcellus
ENSBTAG00000006727	-	86	75.887	ENSCCAG00000027631	PABPN1L	51	75.887	Cebus_capucinus
ENSBTAG00000006727	-	86	79.433	ENSCATG00000031060	PABPN1L	51	79.433	Cercocebus_atys
ENSBTAG00000006727	-	86	78.014	ENSCLAG00000000704	PABPN1L	52	78.014	Chinchilla_lanigera
ENSBTAG00000006727	-	86	79.433	ENSCANG00000039336	PABPN1L	51	79.433	Colobus_angolensis_palliatus
ENSBTAG00000006727	-	86	77.305	ENSCGRG00001013211	Pabpn1l	51	77.305	Cricetulus_griseus_chok1gshd
ENSBTAG00000006727	-	86	77.305	ENSCGRG00000015868	Pabpn1l	51	77.305	Cricetulus_griseus_crigri
ENSBTAG00000006727	-	86	82.979	ENSEASG00005000777	PABPN1L	51	81.560	Equus_asinus_asinus
ENSBTAG00000006727	-	86	82.979	ENSECAG00000000378	PABPN1L	51	81.560	Equus_caballus
ENSBTAG00000006727	-	99	66.871	ENSEEUG00000004747	PABPN1L	69	66.871	Erinaceus_europaeus
ENSBTAG00000006727	-	86	85.816	ENSFCAG00000010465	PABPN1L	51	85.816	Felis_catus
ENSBTAG00000006727	-	85	71.429	ENSFALG00000003319	PABPN1L	59	69.065	Ficedula_albicollis
ENSBTAG00000006727	-	88	71.724	ENSFDAG00000021067	PABPN1L	53	71.724	Fukomys_damarensis
ENSBTAG00000006727	-	84	73.381	ENSGALG00000006242	PABPN1L	79	70.504	Gallus_gallus
ENSBTAG00000006727	-	86	77.305	ENSGGOG00000012670	PABPN1L	51	77.305	Gorilla_gorilla
ENSBTAG00000006727	-	61	68.000	ENSIPUG00000023583	PABPN1L	64	61.905	Ictalurus_punctatus
ENSBTAG00000006727	-	99	70.122	ENSJJAG00000006433	Pabpn1l	61	69.512	Jaculus_jaculus
ENSBTAG00000006727	-	86	79.021	ENSLAFG00000025902	-	58	76.224	Loxodonta_africana
ENSBTAG00000006727	-	86	79.433	ENSMFAG00000002924	PABPN1L	51	79.433	Macaca_fascicularis
ENSBTAG00000006727	-	86	79.433	ENSMMUG00000012438	PABPN1L	51	79.433	Macaca_mulatta
ENSBTAG00000006727	-	86	79.433	ENSMNEG00000044808	PABPN1L	51	79.433	Macaca_nemestrina
ENSBTAG00000006727	-	86	78.723	ENSMLEG00000032667	PABPN1L	51	78.723	Mandrillus_leucophaeus
ENSBTAG00000006727	-	56	66.667	ENSMGAG00000007655	-	100	64.516	Meleagris_gallopavo
ENSBTAG00000006727	-	99	66.258	ENSMAUG00000014032	Pabpn1l	61	66.258	Mesocricetus_auratus
ENSBTAG00000006727	-	87	81.690	ENSMICG00000028179	PABPN1L	52	81.690	Microcebus_murinus
ENSBTAG00000006727	-	85	74.820	ENSMOCG00000007955	Pabpn1l	51	74.820	Microtus_ochrogaster
ENSBTAG00000006727	-	85	72.662	MGP_CAROLIEiJ_G0031670	Pabpn1l	51	72.662	Mus_caroli
ENSBTAG00000006727	-	85	72.662	ENSMUSG00000069867	Pabpn1l	51	72.662	Mus_musculus
ENSBTAG00000006727	-	85	75.540	MGP_PahariEiJ_G0023268	Pabpn1l	51	75.540	Mus_pahari
ENSBTAG00000006727	-	85	71.942	MGP_SPRETEiJ_G0032788	Pabpn1l	51	71.942	Mus_spretus
ENSBTAG00000006727	-	86	78.014	ENSNGAG00000023992	Pabpn1l	52	78.014	Nannospalax_galili
ENSBTAG00000006727	-	86	78.322	ENSOPRG00000005597	PABPN1L	52	78.322	Ochotona_princeps
ENSBTAG00000006727	-	86	71.127	ENSOANG00000013901	PABPN1L	54	73.239	Ornithorhynchus_anatinus
ENSBTAG00000006727	-	95	76.923	ENSOGAG00000000433	PABPN1L	52	83.099	Otolemur_garnettii
ENSBTAG00000006727	-	86	78.014	ENSPPAG00000028866	PABPN1L	51	78.014	Pan_paniscus
ENSBTAG00000006727	-	86	85.106	ENSPPRG00000015106	PABPN1L	51	85.106	Panthera_pardus
ENSBTAG00000006727	-	86	78.014	ENSPTRG00000031120	PABPN1L	51	78.014	Pan_troglodytes
ENSBTAG00000006727	-	86	78.723	ENSPANG00000026039	PABPN1L	51	78.723	Papio_anubis
ENSBTAG00000006727	-	85	67.123	ENSPSIG00000003404	PABPN1L	74	66.438	Pelodiscus_sinensis
ENSBTAG00000006727	-	84	57.857	ENSPMGG00000013927	PABPN1L	63	63.551	Periophthalmus_magnuspinnatus
ENSBTAG00000006727	-	86	76.596	ENSPEMG00000016624	Pabpn1l	53	76.596	Peromyscus_maniculatus_bairdii
ENSBTAG00000006727	-	86	67.606	ENSPCIG00000007038	-	99	63.380	Phascolarctos_cinereus
ENSBTAG00000006727	-	61	66.000	ENSPFOG00000007001	PABPN1L	63	47.771	Poecilia_formosa
ENSBTAG00000006727	-	86	76.596	ENSPPYG00000007655	PABPN1L	51	76.596	Pongo_abelii
ENSBTAG00000006727	-	86	82.979	ENSPCOG00000024077	PABPN1L	51	82.979	Propithecus_coquereli
ENSBTAG00000006727	-	95	76.282	ENSPVAG00000002716	PABPN1L	56	76.282	Pteropus_vampyrus
ENSBTAG00000006727	-	86	76.596	ENSRNOG00000029558	Pabpn1l	52	76.596	Rattus_norvegicus
ENSBTAG00000006727	-	86	78.723	ENSRBIG00000030740	PABPN1L	51	78.723	Rhinopithecus_bieti
ENSBTAG00000006727	-	86	79.433	ENSRROG00000032240	-	51	79.433	Rhinopithecus_roxellana
ENSBTAG00000006727	-	85	78.571	ENSRROG00000035483	-	51	78.571	Rhinopithecus_roxellana
ENSBTAG00000006727	-	99	67.262	ENSSBOG00000018410	PABPN1L	61	67.262	Saimiri_boliviensis_boliviensis
ENSBTAG00000006727	-	100	64.535	ENSSPUG00000007031	PABPN1L	79	62.209	Sphenodon_punctatus
ENSBTAG00000006727	-	86	82.517	ENSSSCG00000036367	PABPN1L	53	82.979	Sus_scrofa
ENSBTAG00000006727	-	60	65.306	ENSTNIG00000009416	PABPN1L	53	67.647	Tetraodon_nigroviridis
ENSBTAG00000006727	-	86	89.362	ENSTTRG00000004691	PABPN1L	59	79.878	Tursiops_truncatus
ENSBTAG00000006727	-	57	72.340	ENSXETG00000011258	pabpn1l	51	67.857	Xenopus_tropicalis