EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000006936 (Gene tree)
Gene ID: 510824
Gene Symbol: MRPS18B
Alias: -
Full Name: mitochondrial ribosomal protein S18B
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 6918 bases
Position: chr23:28366299-28373216
Accession: 50008
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000009107	Ribosomal_S18	PF01084.20	3.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000009107	-	1423	-	ENSBTAP00000009107	258 (aa)	-	F1N059

Gene Model

Click here to download ENSBTAG00000006936's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000006936's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000006936	MRPS18B	100	85.271	ENSG00000204568	MRPS18B	100	85.271	Homo_sapiens
ENSBTAG00000006936	MRPS18B	68	56.000	ENSAPOG00000003719	mrps18b	71	56.000	Acanthochromis_polyacanthus
ENSBTAG00000006936	MRPS18B	100	88.372	ENSAMEG00000013279	MRPS18B	100	88.372	Ailuropoda_melanoleuca
ENSBTAG00000006936	MRPS18B	77	52.000	ENSACIG00000013156	mrps18b	81	52.000	Amphilophus_citrinellus
ENSBTAG00000006936	MRPS18B	87	47.561	ENSAOCG00000008569	mrps18b	100	47.561	Amphiprion_ocellaris
ENSBTAG00000006936	MRPS18B	87	46.748	ENSAPEG00000008204	mrps18b	100	46.748	Amphiprion_percula
ENSBTAG00000006936	MRPS18B	84	49.315	ENSATEG00000012949	mrps18b	86	49.315	Anabas_testudineus
ENSBTAG00000006936	MRPS18B	80	57.746	ENSACAG00000010755	MRPS18B	100	57.746	Anolis_carolinensis
ENSBTAG00000006936	MRPS18B	93	87.083	ENSANAG00000021210	MRPS18B	100	85.659	Aotus_nancymaae
ENSBTAG00000006936	MRPS18B	77	52.000	ENSACLG00000015409	mrps18b	81	52.000	Astatotilapia_calliptera
ENSBTAG00000006936	MRPS18B	58	48.667	ENSACLG00000004576	-	73	48.667	Astatotilapia_calliptera
ENSBTAG00000006936	MRPS18B	69	53.933	ENSAMXG00000034123	mrps18b	72	53.933	Astyanax_mexicanus
ENSBTAG00000006936	MRPS18B	100	85.271	ENSCJAG00000019949	MRPS18B	100	85.271	Callithrix_jacchus
ENSBTAG00000006936	MRPS18B	93	90.000	ENSCAFG00000000411	MRPS18B	100	87.984	Canis_familiaris
ENSBTAG00000006936	MRPS18B	93	90.000	ENSCAFG00020017573	MRPS18B	100	87.984	Canis_lupus_dingo
ENSBTAG00000006936	MRPS18B	100	97.674	ENSCHIG00000021770	MRPS18B	100	97.674	Capra_hircus
ENSBTAG00000006936	MRPS18B	98	88.189	ENSTSYG00000003333	MRPS18B	100	88.189	Carlito_syrichta
ENSBTAG00000006936	MRPS18B	98	82.422	ENSCAPG00000000098	MRPS18B	99	82.422	Cavia_aperea
ENSBTAG00000006936	MRPS18B	98	82.422	ENSCPOG00000015405	MRPS18B	99	82.422	Cavia_porcellus
ENSBTAG00000006936	MRPS18B	100	86.434	ENSCCAG00000037423	MRPS18B	100	86.434	Cebus_capucinus
ENSBTAG00000006936	MRPS18B	100	86.047	ENSCATG00000040250	MRPS18B	100	86.047	Cercocebus_atys
ENSBTAG00000006936	MRPS18B	96	85.425	ENSCLAG00000003282	MRPS18B	98	85.425	Chinchilla_lanigera
ENSBTAG00000006936	MRPS18B	100	85.659	ENSCSAG00000018793	-	100	85.659	Chlorocebus_sabaeus
ENSBTAG00000006936	MRPS18B	100	83.333	ENSCHOG00000005581	MRPS18B	100	83.333	Choloepus_hoffmanni
ENSBTAG00000006936	MRPS18B	71	65.385	ENSCPBG00000018833	MRPS18B	99	54.435	Chrysemys_picta_bellii
ENSBTAG00000006936	MRPS18B	50	36.641	ENSCING00000014510	-	51	36.641	Ciona_intestinalis
ENSBTAG00000006936	MRPS18B	100	86.047	ENSCANG00000043568	MRPS18B	100	86.047	Colobus_angolensis_palliatus
ENSBTAG00000006936	MRPS18B	99	78.682	ENSCGRG00001018086	Mrps18b	100	78.682	Cricetulus_griseus_chok1gshd
ENSBTAG00000006936	MRPS18B	99	78.682	ENSCGRG00000013676	Mrps18b	100	78.682	Cricetulus_griseus_crigri
ENSBTAG00000006936	MRPS18B	77	51.256	ENSCSEG00000018717	mrps18b	82	51.256	Cynoglossus_semilaevis
ENSBTAG00000006936	MRPS18B	68	55.429	ENSCVAG00000004836	mrps18b	69	55.429	Cyprinodon_variegatus
ENSBTAG00000006936	MRPS18B	76	50.769	ENSDARG00000007065	mrps18b	81	50.769	Danio_rerio
ENSBTAG00000006936	MRPS18B	92	84.388	ENSDNOG00000032393	MRPS18B	92	83.333	Dasypus_novemcinctus
ENSBTAG00000006936	MRPS18B	57	45.946	FBgn0032849	mRpS18B	69	45.946	Drosophila_melanogaster
ENSBTAG00000006936	MRPS18B	99	75.486	ENSETEG00000003113	MRPS18B	99	75.486	Echinops_telfairi
ENSBTAG00000006936	MRPS18B	78	44.231	ENSEBUG00000003724	mrps18b	76	44.231	Eptatretus_burgeri
ENSBTAG00000006936	MRPS18B	100	89.922	ENSEASG00005018922	MRPS18B	100	89.922	Equus_asinus_asinus
ENSBTAG00000006936	MRPS18B	100	89.147	ENSECAG00000022485	MRPS18B	100	89.147	Equus_caballus
ENSBTAG00000006936	MRPS18B	100	80.620	ENSEEUG00000010352	MRPS18B	100	80.620	Erinaceus_europaeus
ENSBTAG00000006936	MRPS18B	76	53.333	ENSELUG00000023727	mrps18b	78	53.333	Esox_lucius
ENSBTAG00000006936	MRPS18B	93	88.797	ENSFCAG00000007686	MRPS18B	100	86.822	Felis_catus
ENSBTAG00000006936	MRPS18B	93	86.192	ENSFDAG00000012231	MRPS18B	98	86.192	Fukomys_damarensis
ENSBTAG00000006936	MRPS18B	68	55.429	ENSFHEG00000017861	mrps18b	71	55.429	Fundulus_heteroclitus
ENSBTAG00000006936	MRPS18B	75	54.404	ENSGMOG00000013271	mrps18b	100	54.404	Gadus_morhua
ENSBTAG00000006936	MRPS18B	68	55.429	ENSGACG00000001379	mrps18b	89	55.429	Gasterosteus_aculeatus
ENSBTAG00000006936	MRPS18B	100	78.295	ENSGGOG00000011317	MRPS18B	100	78.295	Gorilla_gorilla
ENSBTAG00000006936	MRPS18B	77	52.000	ENSHBUG00000008445	mrps18b	81	52.000	Haplochromis_burtoni
ENSBTAG00000006936	MRPS18B	98	83.730	ENSHGLG00000019371	MRPS18B	99	83.730	Heterocephalus_glaber_female
ENSBTAG00000006936	MRPS18B	98	83.730	ENSHGLG00100010530	MRPS18B	97	83.730	Heterocephalus_glaber_male
ENSBTAG00000006936	MRPS18B	77	55.721	ENSHCOG00000007012	mrps18b	82	55.721	Hippocampus_comes
ENSBTAG00000006936	MRPS18B	68	58.286	ENSIPUG00000013958	mrps18b	72	58.286	Ictalurus_punctatus
ENSBTAG00000006936	MRPS18B	89	86.957	ENSSTOG00000011853	MRPS18B	99	86.957	Ictidomys_tridecemlineatus
ENSBTAG00000006936	MRPS18B	99	83.658	ENSJJAG00000003794	Mrps18b	99	83.658	Jaculus_jaculus
ENSBTAG00000006936	MRPS18B	87	47.368	ENSKMAG00000003449	mrps18b	93	47.368	Kryptolebias_marmoratus
ENSBTAG00000006936	MRPS18B	83	46.330	ENSLBEG00000012943	mrps18b	89	46.330	Labrus_bergylta
ENSBTAG00000006936	MRPS18B	71	63.587	ENSLACG00000004722	MRPS18B	76	63.587	Latimeria_chalumnae
ENSBTAG00000006936	MRPS18B	99	87.597	ENSLAFG00000017285	MRPS18B	100	87.597	Loxodonta_africana
ENSBTAG00000006936	MRPS18B	100	85.659	ENSMFAG00000003966	MRPS18B	100	85.659	Macaca_fascicularis
ENSBTAG00000006936	MRPS18B	100	85.659	ENSMMUG00000006525	MRPS18B	100	85.659	Macaca_mulatta
ENSBTAG00000006936	MRPS18B	100	84.884	ENSMNEG00000045059	MRPS18B	100	84.884	Macaca_nemestrina
ENSBTAG00000006936	MRPS18B	100	80.620	ENSMLEG00000033833	MRPS18B	100	80.620	Mandrillus_leucophaeus
ENSBTAG00000006936	MRPS18B	84	52.074	ENSMAMG00000020243	mrps18b	88	52.074	Mastacembelus_armatus
ENSBTAG00000006936	MRPS18B	77	52.000	ENSMZEG00005017910	mrps18b	81	52.000	Maylandia_zebra
ENSBTAG00000006936	MRPS18B	57	48.980	ENSMZEG00005019697	-	69	48.980	Maylandia_zebra
ENSBTAG00000006936	MRPS18B	99	77.043	ENSMAUG00000019160	Mrps18b	100	77.043	Mesocricetus_auratus
ENSBTAG00000006936	MRPS18B	99	87.549	ENSMICG00000031536	MRPS18B	99	87.549	Microcebus_murinus
ENSBTAG00000006936	MRPS18B	90	83.983	ENSMOCG00000013273	Mrps18b	99	81.423	Microtus_ochrogaster
ENSBTAG00000006936	MRPS18B	76	51.531	ENSMMOG00000012076	mrps18b	82	51.531	Mola_mola
ENSBTAG00000006936	MRPS18B	93	76.151	ENSMODG00000015933	MRPS18B	99	76.151	Monodelphis_domestica
ENSBTAG00000006936	MRPS18B	84	50.459	ENSMALG00000019456	mrps18b	85	50.459	Monopterus_albus
ENSBTAG00000006936	MRPS18B	99	78.988	MGP_CAROLIEiJ_G0021541	Mrps18b	100	78.988	Mus_caroli
ENSBTAG00000006936	MRPS18B	99	78.988	ENSMUSG00000024436	Mrps18b	100	78.988	Mus_musculus
ENSBTAG00000006936	MRPS18B	99	79.767	MGP_PahariEiJ_G0020535	Mrps18b	100	79.767	Mus_pahari
ENSBTAG00000006936	MRPS18B	99	77.821	MGP_SPRETEiJ_G0022448	Mrps18b	100	77.821	Mus_spretus
ENSBTAG00000006936	MRPS18B	100	86.822	ENSMPUG00000011739	MRPS18B	100	86.822	Mustela_putorius_furo
ENSBTAG00000006936	MRPS18B	100	85.271	ENSMLUG00000008850	MRPS18B	100	85.271	Myotis_lucifugus
ENSBTAG00000006936	MRPS18B	90	86.207	ENSNGAG00000017874	Mrps18b	95	86.207	Nannospalax_galili
ENSBTAG00000006936	MRPS18B	62	45.283	ENSNBRG00000020716	-	87	45.283	Neolamprologus_brichardi
ENSBTAG00000006936	MRPS18B	100	86.434	ENSNLEG00000005224	MRPS18B	100	86.434	Nomascus_leucogenys
ENSBTAG00000006936	MRPS18B	89	78.166	ENSMEUG00000012457	MRPS18B	99	78.243	Notamacropus_eugenii
ENSBTAG00000006936	MRPS18B	72	55.615	ENSONIG00000015945	mrps18b	81	53.000	Oreochromis_niloticus
ENSBTAG00000006936	MRPS18B	88	89.823	ENSOCUG00000002149	MRPS18B	100	85.659	Oryctolagus_cuniculus
ENSBTAG00000006936	MRPS18B	68	56.571	ENSORLG00000010546	mrps18b	78	56.571	Oryzias_latipes
ENSBTAG00000006936	MRPS18B	88	49.153	ENSORLG00020018506	mrps18b	99	49.362	Oryzias_latipes_hni
ENSBTAG00000006936	MRPS18B	68	57.143	ENSORLG00015010248	mrps18b	73	57.143	Oryzias_latipes_hsok
ENSBTAG00000006936	MRPS18B	68	56.571	ENSOMEG00000008194	mrps18b	74	56.571	Oryzias_melastigma
ENSBTAG00000006936	MRPS18B	99	85.603	ENSOGAG00000004435	MRPS18B	100	85.603	Otolemur_garnettii
ENSBTAG00000006936	MRPS18B	100	98.837	ENSOARG00000012647	MRPS18B	100	98.837	Ovis_aries
ENSBTAG00000006936	MRPS18B	100	84.496	ENSPPAG00000018246	-	100	84.496	Pan_paniscus
ENSBTAG00000006936	MRPS18B	100	86.047	ENSPPAG00000039692	-	100	86.047	Pan_paniscus
ENSBTAG00000006936	MRPS18B	100	86.434	ENSPPRG00000003538	MRPS18B	100	86.434	Panthera_pardus
ENSBTAG00000006936	MRPS18B	100	86.434	ENSPTIG00000016443	MRPS18B	100	86.434	Panthera_tigris_altaica
ENSBTAG00000006936	MRPS18B	100	86.047	ENSPTRG00000017932	MRPS18B	100	86.047	Pan_troglodytes
ENSBTAG00000006936	MRPS18B	100	85.659	ENSPANG00000017647	MRPS18B	100	85.659	Papio_anubis
ENSBTAG00000006936	MRPS18B	69	54.802	ENSPKIG00000011007	mrps18b	71	54.802	Paramormyrops_kingsleyae
ENSBTAG00000006936	MRPS18B	71	63.736	ENSPSIG00000011533	MRPS18B	83	60.500	Pelodiscus_sinensis
ENSBTAG00000006936	MRPS18B	78	50.739	ENSPMGG00000020546	mrps18b	83	50.739	Periophthalmus_magnuspinnatus
ENSBTAG00000006936	MRPS18B	99	78.988	ENSPEMG00000001695	Mrps18b	99	81.974	Peromyscus_maniculatus_bairdii
ENSBTAG00000006936	MRPS18B	86	51.965	ENSPMAG00000001665	mrps18b	97	52.402	Petromyzon_marinus
ENSBTAG00000006936	MRPS18B	86	76.577	ENSPCIG00000014983	MRPS18B	88	74.895	Phascolarctos_cinereus
ENSBTAG00000006936	MRPS18B	68	53.714	ENSPFOG00000016437	mrps18b	63	53.714	Poecilia_formosa
ENSBTAG00000006936	MRPS18B	68	54.286	ENSPLAG00000002566	mrps18b	71	54.286	Poecilia_latipinna
ENSBTAG00000006936	MRPS18B	68	53.714	ENSPMEG00000010978	mrps18b	62	53.714	Poecilia_mexicana
ENSBTAG00000006936	MRPS18B	59	59.868	ENSPREG00000012186	mrps18b	57	59.868	Poecilia_reticulata
ENSBTAG00000006936	MRPS18B	100	78.295	ENSPPYG00000016412	MRPS18B	100	78.295	Pongo_abelii
ENSBTAG00000006936	MRPS18B	99	85.603	ENSPCAG00000017028	MRPS18B	99	85.603	Procavia_capensis
ENSBTAG00000006936	MRPS18B	97	79.283	ENSPCOG00000015431	MRPS18B	99	79.283	Propithecus_coquereli
ENSBTAG00000006936	MRPS18B	100	86.434	ENSPVAG00000003981	MRPS18B	100	86.434	Pteropus_vampyrus
ENSBTAG00000006936	MRPS18B	50	48.462	ENSPNYG00000004553	-	70	48.462	Pundamilia_nyererei
ENSBTAG00000006936	MRPS18B	77	52.000	ENSPNYG00000011383	mrps18b	83	52.000	Pundamilia_nyererei
ENSBTAG00000006936	MRPS18B	83	50.000	ENSPNAG00000029858	mrps18b	87	50.000	Pygocentrus_nattereri
ENSBTAG00000006936	MRPS18B	99	79.767	ENSRNOG00000000804	Mrps18b	98	79.767	Rattus_norvegicus
ENSBTAG00000006936	MRPS18B	100	86.822	ENSRBIG00000037128	MRPS18B	100	86.822	Rhinopithecus_bieti
ENSBTAG00000006936	MRPS18B	100	86.822	ENSRROG00000017497	MRPS18B	100	86.822	Rhinopithecus_roxellana
ENSBTAG00000006936	MRPS18B	98	85.827	ENSSBOG00000023414	MRPS18B	99	85.714	Saimiri_boliviensis_boliviensis
ENSBTAG00000006936	MRPS18B	93	71.548	ENSSHAG00000006769	MRPS18B	95	71.548	Sarcophilus_harrisii
ENSBTAG00000006936	MRPS18B	69	56.425	ENSSFOG00015015664	mrps18b	78	54.011	Scleropages_formosus
ENSBTAG00000006936	MRPS18B	84	52.466	ENSSMAG00000020784	mrps18b	89	52.466	Scophthalmus_maximus
ENSBTAG00000006936	MRPS18B	72	56.757	ENSSDUG00000009519	mrps18b	83	54.040	Seriola_dumerili
ENSBTAG00000006936	MRPS18B	59	61.184	ENSSLDG00000000473	mrps18b	55	61.438	Seriola_lalandi_dorsalis
ENSBTAG00000006936	MRPS18B	87	54.148	ENSSPUG00000015230	MRPS18B	92	54.148	Sphenodon_punctatus
ENSBTAG00000006936	MRPS18B	77	54.000	ENSSPAG00000004508	mrps18b	82	54.000	Stegastes_partitus
ENSBTAG00000006936	MRPS18B	100	91.860	ENSSSCG00000029425	MRPS18B	100	91.860	Sus_scrofa
ENSBTAG00000006936	MRPS18B	69	54.396	ENSTRUG00000022309	mrps18b	64	54.396	Takifugu_rubripes
ENSBTAG00000006936	MRPS18B	100	92.636	ENSTTRG00000008313	MRPS18B	100	92.636	Tursiops_truncatus
ENSBTAG00000006936	MRPS18B	100	88.760	ENSUAMG00000005833	MRPS18B	100	88.760	Ursus_americanus
ENSBTAG00000006936	MRPS18B	100	88.760	ENSUMAG00000019652	MRPS18B	77	88.760	Ursus_maritimus
ENSBTAG00000006936	MRPS18B	75	91.710	ENSVPAG00000001181	MRPS18B	100	91.710	Vicugna_pacos
ENSBTAG00000006936	MRPS18B	93	89.167	ENSVVUG00000009631	MRPS18B	100	87.209	Vulpes_vulpes
ENSBTAG00000006936	MRPS18B	82	47.345	ENSXETG00000032503	MRPS18B	98	47.345	Xenopus_tropicalis
ENSBTAG00000006936	MRPS18B	68	54.857	ENSXCOG00000003011	mrps18b	87	54.857	Xiphophorus_couchianus
ENSBTAG00000006936	MRPS18B	68	54.286	ENSXMAG00000016698	mrps18b	71	54.286	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	11402041.	HDA	Function
GO:0005743	mitochondrial inner membrane	-	TAS	Component
GO:0005763	mitochondrial small ribosomal subunit	11402041.	HDA	Component
GO:0005763	mitochondrial small ribosomal subunit	24799711.	IDA	Component
GO:0032543	mitochondrial translation	11402041.	HDA	Process