EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000007266 (Gene tree)
Gene ID: 508581
Gene Symbol: DDX55
Alias: -
Full Name: DEAD-box helicase 55
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 17754 bases
Position: chr17:52061347-52079100
Accession: 27977
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000057882	ResIII	PF04851.15	8.1e-06	1	1
ENSBTAP00000009556	ResIII	PF04851.15	8.9e-06	1	1
ENSBTAP00000057882	DEAD	PF00270.29	1e-41	1	1
ENSBTAP00000009556	DEAD	PF00270.29	1.4e-41	1	1
ENSBTAP00000059335	DEAD	PF00270.29	4.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000009556	-	2619	-	ENSBTAP00000009556	685 (aa)	-	F1MW45
ENSBTAT00000087182	-	1920	-	ENSBTAP00000059335	639 (aa)	-	-
ENSBTAT00000085640	-	1785	-	ENSBTAP00000057882	594 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000007266's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000007266's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000007266	DDX55	74	36.424	ENSBTAG00000002382	DDX10	50	38.631
ENSBTAG00000007266	DDX55	66	32.274	ENSBTAG00000015187	DDX41	62	33.173
ENSBTAG00000007266	DDX55	56	34.375	ENSBTAG00000035907	DDX3X	54	35.457
ENSBTAG00000007266	DDX55	56	32.277	ENSBTAG00000018423	DDX5	57	32.249
ENSBTAG00000007266	DDX55	61	30.296	ENSBTAG00000014558	DDX21	53	30.296
ENSBTAG00000007266	DDX55	69	31.532	ENSBTAG00000003530	DDX31	76	31.532
ENSBTAG00000007266	DDX55	57	30.612	ENSBTAG00000016023	EIF4A3	89	30.612
ENSBTAG00000007266	DDX55	52	31.268	ENSBTAG00000009067	DDX6	72	31.268
ENSBTAG00000007266	DDX55	54	31.928	ENSBTAG00000000811	DDX49	69	32.402
ENSBTAG00000007266	DDX55	79	33.954	ENSBTAG00000027319	-	65	36.364
ENSBTAG00000007266	DDX55	51	30.366	ENSBTAG00000004290	DDX28	66	30.366
ENSBTAG00000007266	DDX55	57	34.513	ENSBTAG00000019608	DDX47	72	36.207
ENSBTAG00000007266	DDX55	56	32.938	ENSBTAG00000009887	DDX17	74	32.817
ENSBTAG00000007266	DDX55	57	32.571	ENSBTAG00000008871	DDX4	51	33.983
ENSBTAG00000007266	DDX55	52	30.471	ENSBTAG00000021814	-	53	30.471
ENSBTAG00000007266	DDX55	57	30.321	ENSBTAG00000020563	DDX59	52	30.321
ENSBTAG00000007266	DDX55	79	33.954	ENSBTAG00000015077	-	67	36.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000007266	DDX55	100	88.852	ENSG00000111364	DDX55	100	93.844	Homo_sapiens
ENSBTAG00000007266	DDX55	98	69.088	ENSAPOG00000013126	ddx55	99	73.142	Acanthochromis_polyacanthus
ENSBTAG00000007266	DDX55	100	85.691	ENSAMEG00000015274	DDX55	100	90.516	Ailuropoda_melanoleuca
ENSBTAG00000007266	DDX55	98	68.412	ENSACIG00000007580	ddx55	99	72.297	Amphilophus_citrinellus
ENSBTAG00000007266	DDX55	98	68.866	ENSAOCG00000012037	ddx55	93	72.927	Amphiprion_ocellaris
ENSBTAG00000007266	DDX55	98	69.036	ENSAPEG00000011003	ddx55	93	73.096	Amphiprion_percula
ENSBTAG00000007266	DDX55	99	66.611	ENSATEG00000004029	ddx55	99	70.618	Anabas_testudineus
ENSBTAG00000007266	DDX55	94	73.944	ENSAPLG00000015032	DDX55	100	78.169	Anas_platyrhynchos
ENSBTAG00000007266	DDX55	97	78.571	ENSACAG00000015296	DDX55	98	82.993	Anolis_carolinensis
ENSBTAG00000007266	DDX55	99	70.833	ENSANAG00000034064	DDX55	99	75.500	Aotus_nancymaae
ENSBTAG00000007266	DDX55	98	68.750	ENSACLG00000024691	ddx55	99	72.635	Astatotilapia_calliptera
ENSBTAG00000007266	DDX55	98	64.566	ENSAMXG00000019947	ddx55	98	68.305	Astyanax_mexicanus
ENSBTAG00000007266	DDX55	94	34.812	WBGene00013983	ZK512.2	100	35.701	Caenorhabditis_elegans
ENSBTAG00000007266	DDX55	99	87.667	ENSCJAG00000020471	-	99	92.500	Callithrix_jacchus
ENSBTAG00000007266	DDX55	100	85.358	ENSCAFG00000007452	DDX55	100	89.850	Canis_familiaris
ENSBTAG00000007266	DDX55	90	85.820	ENSCAFG00020015254	DDX55	97	90.792	Canis_lupus_dingo
ENSBTAG00000007266	DDX55	100	93.178	ENSCHIG00000020402	DDX55	100	98.336	Capra_hircus
ENSBTAG00000007266	DDX55	100	86.689	ENSTSYG00000007427	DDX55	100	91.681	Carlito_syrichta
ENSBTAG00000007266	DDX55	98	81.664	ENSCAPG00000005124	DDX55	97	88.693	Cavia_aperea
ENSBTAG00000007266	DDX55	100	84.193	ENSCPOG00000010015	DDX55	100	88.686	Cavia_porcellus
ENSBTAG00000007266	DDX55	99	87.500	ENSCCAG00000021652	DDX55	99	92.500	Cebus_capucinus
ENSBTAG00000007266	DDX55	100	83.987	ENSCATG00000034315	DDX55	100	88.889	Cercocebus_atys
ENSBTAG00000007266	DDX55	100	85.524	ENSCLAG00000011203	DDX55	100	90.017	Chinchilla_lanigera
ENSBTAG00000007266	DDX55	100	88.519	ENSCSAG00000002057	DDX55	100	93.178	Chlorocebus_sabaeus
ENSBTAG00000007266	DDX55	58	100.000	ENSCHOG00000006189	-	60	100.000	Choloepus_hoffmanni
ENSBTAG00000007266	DDX55	87	80.880	ENSCPBG00000025960	DDX55	96	86.233	Chrysemys_picta_bellii
ENSBTAG00000007266	DDX55	96	50.678	ENSCING00000009622	-	98	53.220	Ciona_intestinalis
ENSBTAG00000007266	DDX55	95	50.172	ENSCSAVG00000003375	-	97	53.688	Ciona_savignyi
ENSBTAG00000007266	DDX55	100	88.686	ENSCANG00000000156	DDX55	100	93.677	Colobus_angolensis_palliatus
ENSBTAG00000007266	DDX55	99	84.333	ENSCGRG00001001652	Ddx55	99	89.167	Cricetulus_griseus_chok1gshd
ENSBTAG00000007266	DDX55	99	84.167	ENSCGRG00000014742	Ddx55	99	89.000	Cricetulus_griseus_crigri
ENSBTAG00000007266	DDX55	98	67.230	ENSCSEG00000012161	ddx55	99	71.115	Cynoglossus_semilaevis
ENSBTAG00000007266	DDX55	96	69.655	ENSCVAG00000006635	ddx55	98	73.621	Cyprinodon_variegatus
ENSBTAG00000007266	DDX55	97	70.940	ENSDARG00000009864	ddx55	98	75.000	Danio_rerio
ENSBTAG00000007266	DDX55	100	86.711	ENSDNOG00000005167	DDX55	99	91.694	Dasypus_novemcinctus
ENSBTAG00000007266	DDX55	96	43.569	FBgn0037561	CG9630	99	46.557	Drosophila_melanogaster
ENSBTAG00000007266	DDX55	94	69.558	ENSETEG00000001826	DDX55	100	74.690	Echinops_telfairi
ENSBTAG00000007266	DDX55	97	60.906	ENSEBUG00000007071	ddx55	99	64.643	Eptatretus_burgeri
ENSBTAG00000007266	DDX55	99	88.648	ENSEASG00005012650	DDX55	99	93.656	Equus_asinus_asinus
ENSBTAG00000007266	DDX55	90	89.319	ENSECAG00000011237	DDX55	92	91.564	Equus_caballus
ENSBTAG00000007266	DDX55	99	77.167	ENSEEUG00000006313	DDX55	99	81.667	Erinaceus_europaeus
ENSBTAG00000007266	DDX55	98	66.949	ENSELUG00000002616	ddx55	97	71.017	Esox_lucius
ENSBTAG00000007266	DDX55	100	86.689	ENSFCAG00000003770	DDX55	100	91.348	Felis_catus
ENSBTAG00000007266	DDX55	96	81.002	ENSFALG00000009300	DDX55	97	85.492	Ficedula_albicollis
ENSBTAG00000007266	DDX55	99	85.309	ENSFDAG00000004680	DDX55	99	89.649	Fukomys_damarensis
ENSBTAG00000007266	DDX55	98	67.458	ENSFHEG00000007912	ddx55	100	71.525	Fundulus_heteroclitus
ENSBTAG00000007266	DDX55	96	64.138	ENSGMOG00000017762	ddx55	96	68.621	Gadus_morhua
ENSBTAG00000007266	DDX55	97	80.241	ENSGALG00000003298	DDX55	98	84.880	Gallus_gallus
ENSBTAG00000007266	DDX55	97	68.729	ENSGAFG00000004388	ddx55	99	72.184	Gambusia_affinis
ENSBTAG00000007266	DDX55	97	68.376	ENSGACG00000015591	ddx55	96	71.980	Gasterosteus_aculeatus
ENSBTAG00000007266	DDX55	90	81.031	ENSGAGG00000014403	DDX55	99	85.820	Gopherus_agassizii
ENSBTAG00000007266	DDX55	100	88.852	ENSGGOG00000026102	DDX55	100	93.844	Gorilla_gorilla
ENSBTAG00000007266	DDX55	98	68.750	ENSHBUG00000011523	ddx55	99	72.635	Haplochromis_burtoni
ENSBTAG00000007266	DDX55	100	85.857	ENSHGLG00000019202	DDX55	100	90.183	Heterocephalus_glaber_female
ENSBTAG00000007266	DDX55	100	85.857	ENSHGLG00100019440	DDX55	100	90.183	Heterocephalus_glaber_male
ENSBTAG00000007266	DDX55	96	61.043	ENSHCOG00000004710	ddx55	99	64.483	Hippocampus_comes
ENSBTAG00000007266	DDX55	98	68.475	ENSIPUG00000014551	ddx55	97	72.758	Ictalurus_punctatus
ENSBTAG00000007266	DDX55	100	85.857	ENSSTOG00000006121	DDX55	100	90.516	Ictidomys_tridecemlineatus
ENSBTAG00000007266	DDX55	100	86.190	ENSJJAG00000013401	Ddx55	100	91.181	Jaculus_jaculus
ENSBTAG00000007266	DDX55	97	69.060	ENSKMAG00000022006	ddx55	99	73.116	Kryptolebias_marmoratus
ENSBTAG00000007266	DDX55	99	67.282	ENSLBEG00000021815	ddx55	98	71.743	Labrus_bergylta
ENSBTAG00000007266	DDX55	98	74.536	ENSLACG00000017050	DDX55	99	78.752	Latimeria_chalumnae
ENSBTAG00000007266	DDX55	98	70.119	ENSLOCG00000005828	ddx55	98	74.533	Lepisosteus_oculatus
ENSBTAG00000007266	DDX55	99	88.000	ENSLAFG00000007293	DDX55	100	92.833	Loxodonta_africana
ENSBTAG00000007266	DDX55	100	88.353	ENSMFAG00000038165	DDX55	100	93.344	Macaca_fascicularis
ENSBTAG00000007266	DDX55	100	88.353	ENSMMUG00000013178	DDX55	100	93.344	Macaca_mulatta
ENSBTAG00000007266	DDX55	100	88.353	ENSMNEG00000028630	DDX55	100	93.344	Macaca_nemestrina
ENSBTAG00000007266	DDX55	99	88.667	ENSMLEG00000039187	DDX55	99	93.667	Mandrillus_leucophaeus
ENSBTAG00000007266	DDX55	98	68.866	ENSMAMG00000011297	ddx55	98	72.927	Mastacembelus_armatus
ENSBTAG00000007266	DDX55	98	68.750	ENSMZEG00005008047	ddx55	99	72.635	Maylandia_zebra
ENSBTAG00000007266	DDX55	100	75.456	ENSMGAG00000003185	DDX55	100	79.768	Meleagris_gallopavo
ENSBTAG00000007266	DDX55	99	84.833	ENSMAUG00000020054	Ddx55	99	89.667	Mesocricetus_auratus
ENSBTAG00000007266	DDX55	99	80.865	ENSMICG00000006477	DDX55	99	85.691	Microcebus_murinus
ENSBTAG00000007266	DDX55	99	85.000	ENSMOCG00000021289	Ddx55	99	89.833	Microtus_ochrogaster
ENSBTAG00000007266	DDX55	97	67.979	ENSMMOG00000009411	ddx55	97	72.260	Mola_mola
ENSBTAG00000007266	DDX55	94	83.363	ENSMODG00000012519	DDX55	97	87.965	Monodelphis_domestica
ENSBTAG00000007266	DDX55	97	65.866	ENSMALG00000018543	ddx55	97	69.795	Monopterus_albus
ENSBTAG00000007266	DDX55	74	85.169	MGP_CAROLIEiJ_G0027755	-	99	91.685	Mus_caroli
ENSBTAG00000007266	DDX55	99	84.667	ENSMUSG00000029389	Ddx55	99	89.500	Mus_musculus
ENSBTAG00000007266	DDX55	99	81.500	MGP_PahariEiJ_G0024335	Ddx55	99	86.333	Mus_pahari
ENSBTAG00000007266	DDX55	99	84.500	MGP_SPRETEiJ_G0028753	Ddx55	99	89.333	Mus_spretus
ENSBTAG00000007266	DDX55	100	82.226	ENSMPUG00000001505	DDX55	100	86.877	Mustela_putorius_furo
ENSBTAG00000007266	DDX55	87	72.328	ENSMLUG00000025148	-	96	77.672	Myotis_lucifugus
ENSBTAG00000007266	DDX55	99	76.833	ENSMLUG00000001265	-	99	80.667	Myotis_lucifugus
ENSBTAG00000007266	DDX55	100	85.857	ENSNGAG00000020564	Ddx55	100	90.849	Nannospalax_galili
ENSBTAG00000007266	DDX55	98	68.750	ENSNBRG00000018748	ddx55	99	72.635	Neolamprologus_brichardi
ENSBTAG00000007266	DDX55	99	89.167	ENSNLEG00000001658	DDX55	100	94.167	Nomascus_leucogenys
ENSBTAG00000007266	DDX55	99	79.167	ENSMEUG00000013689	DDX55	99	83.333	Notamacropus_eugenii
ENSBTAG00000007266	DDX55	99	82.609	ENSOPRG00000000850	DDX55	99	87.291	Ochotona_princeps
ENSBTAG00000007266	DDX55	93	70.053	ENSODEG00000016592	-	100	74.688	Octodon_degus
ENSBTAG00000007266	DDX55	100	83.527	ENSODEG00000009632	-	100	88.235	Octodon_degus
ENSBTAG00000007266	DDX55	99	67.216	ENSONIG00000015311	ddx55	99	71.005	Oreochromis_niloticus
ENSBTAG00000007266	DDX55	94	83.216	ENSOANG00000015332	DDX55	100	88.163	Ornithorhynchus_anatinus
ENSBTAG00000007266	DDX55	100	84.193	ENSOCUG00000003456	DDX55	100	88.686	Oryctolagus_cuniculus
ENSBTAG00000007266	DDX55	98	68.792	ENSORLG00000029482	ddx55	99	72.651	Oryzias_latipes
ENSBTAG00000007266	DDX55	98	68.624	ENSORLG00015004885	ddx55	99	72.483	Oryzias_latipes_hsok
ENSBTAG00000007266	DDX55	98	69.543	ENSOMEG00000023619	ddx55	99	73.435	Oryzias_melastigma
ENSBTAG00000007266	DDX55	99	87.248	ENSOGAG00000009195	DDX55	99	91.528	Otolemur_garnettii
ENSBTAG00000007266	DDX55	100	93.511	ENSOARG00000003364	DDX55	100	98.502	Ovis_aries
ENSBTAG00000007266	DDX55	100	88.519	ENSPPAG00000005988	DDX55	100	93.511	Pan_paniscus
ENSBTAG00000007266	DDX55	100	86.855	ENSPPRG00000012157	DDX55	100	91.514	Panthera_pardus
ENSBTAG00000007266	DDX55	94	87.080	ENSPTIG00000011490	DDX55	94	92.035	Panthera_tigris_altaica
ENSBTAG00000007266	DDX55	100	88.519	ENSPTRG00000005601	DDX55	100	93.511	Pan_troglodytes
ENSBTAG00000007266	DDX55	100	88.686	ENSPANG00000007905	DDX55	100	93.677	Papio_anubis
ENSBTAG00000007266	DDX55	97	70.034	ENSPKIG00000023661	ddx55	99	74.486	Paramormyrops_kingsleyae
ENSBTAG00000007266	DDX55	93	79.537	ENSPSIG00000012901	DDX55	100	83.906	Pelodiscus_sinensis
ENSBTAG00000007266	DDX55	90	66.483	ENSPMGG00000017224	ddx55	96	71.511	Periophthalmus_magnuspinnatus
ENSBTAG00000007266	DDX55	99	84.833	ENSPEMG00000018052	Ddx55	99	89.667	Peromyscus_maniculatus_bairdii
ENSBTAG00000007266	DDX55	85	61.047	ENSPMAG00000007486	ddx55	99	65.125	Petromyzon_marinus
ENSBTAG00000007266	DDX55	90	84.530	ENSPCIG00000010973	DDX55	98	89.319	Phascolarctos_cinereus
ENSBTAG00000007266	DDX55	97	68.664	ENSPFOG00000006970	ddx55	91	72.479	Poecilia_formosa
ENSBTAG00000007266	DDX55	97	68.729	ENSPLAG00000014735	ddx55	99	72.680	Poecilia_latipinna
ENSBTAG00000007266	DDX55	97	68.729	ENSPMEG00000020635	ddx55	99	72.680	Poecilia_mexicana
ENSBTAG00000007266	DDX55	97	68.385	ENSPREG00000016644	ddx55	99	72.337	Poecilia_reticulata
ENSBTAG00000007266	DDX55	100	86.689	ENSPPYG00000005091	DDX55	100	91.681	Pongo_abelii
ENSBTAG00000007266	DDX55	99	84.333	ENSPCAG00000014127	DDX55	99	89.000	Procavia_capensis
ENSBTAG00000007266	DDX55	99	88.667	ENSPCOG00000011189	DDX55	99	93.667	Propithecus_coquereli
ENSBTAG00000007266	DDX55	100	84.359	ENSPVAG00000015321	DDX55	100	89.018	Pteropus_vampyrus
ENSBTAG00000007266	DDX55	98	68.581	ENSPNYG00000003669	ddx55	99	72.466	Pundamilia_nyererei
ENSBTAG00000007266	DDX55	98	70.847	ENSPNAG00000012855	ddx55	98	74.915	Pygocentrus_nattereri
ENSBTAG00000007266	DDX55	99	84.000	ENSRNOG00000001043	Ddx55	99	88.833	Rattus_norvegicus
ENSBTAG00000007266	DDX55	100	88.020	ENSRBIG00000044699	DDX55	100	93.012	Rhinopithecus_bieti
ENSBTAG00000007266	DDX55	100	88.353	ENSRROG00000024824	DDX55	100	93.344	Rhinopithecus_roxellana
ENSBTAG00000007266	DDX55	88	38.448	YFL002C	-	88	40.217	Saccharomyces_cerevisiae
ENSBTAG00000007266	DDX55	99	88.000	ENSSBOG00000024833	DDX55	99	93.000	Saimiri_boliviensis_boliviensis
ENSBTAG00000007266	DDX55	94	83.569	ENSSHAG00000015820	DDX55	99	87.986	Sarcophilus_harrisii
ENSBTAG00000007266	DDX55	98	70.707	ENSSFOG00015017496	ddx55	96	76.158	Scleropages_formosus
ENSBTAG00000007266	DDX55	98	68.855	ENSSMAG00000010441	ddx55	98	72.896	Scophthalmus_maximus
ENSBTAG00000007266	DDX55	99	68.174	ENSSDUG00000023568	ddx55	99	72.027	Seriola_dumerili
ENSBTAG00000007266	DDX55	98	63.328	ENSSLDG00000011299	ddx55	98	66.892	Seriola_lalandi_dorsalis
ENSBTAG00000007266	DDX55	90	82.222	ENSSARG00000003842	DDX55	100	86.275	Sorex_araneus
ENSBTAG00000007266	DDX55	99	79.097	ENSSPUG00000012798	DDX55	99	83.612	Sphenodon_punctatus
ENSBTAG00000007266	DDX55	98	69.595	ENSSPAG00000011806	ddx55	98	73.649	Stegastes_partitus
ENSBTAG00000007266	DDX55	90	89.687	ENSSSCG00000009771	DDX55	98	94.843	Sus_scrofa
ENSBTAG00000007266	DDX55	94	80.986	ENSTGUG00000005302	-	98	84.283	Taeniopygia_guttata
ENSBTAG00000007266	DDX55	97	67.295	ENSTRUG00000018525	ddx55	97	71.404	Takifugu_rubripes
ENSBTAG00000007266	DDX55	97	66.382	ENSTNIG00000013515	DDX55	97	70.478	Tetraodon_nigroviridis
ENSBTAG00000007266	DDX55	74	76.126	ENSTBEG00000010822	DDX55	100	82.658	Tupaia_belangeri
ENSBTAG00000007266	DDX55	100	89.684	ENSTTRG00000007251	DDX55	100	94.509	Tursiops_truncatus
ENSBTAG00000007266	DDX55	100	85.691	ENSUAMG00000012589	DDX55	100	90.682	Ursus_americanus
ENSBTAG00000007266	DDX55	93	85.663	ENSUMAG00000003869	DDX55	100	91.039	Ursus_maritimus
ENSBTAG00000007266	DDX55	93	82.014	ENSVPAG00000007028	DDX55	99	87.074	Vicugna_pacos
ENSBTAG00000007266	DDX55	100	85.358	ENSVVUG00000027506	DDX55	99	90.525	Vulpes_vulpes
ENSBTAG00000007266	DDX55	99	72.651	ENSXETG00000005825	ddx55	100	77.181	Xenopus_tropicalis
ENSBTAG00000007266	DDX55	97	68.900	ENSXCOG00000010120	ddx55	99	72.852	Xiphophorus_couchianus
ENSBTAG00000007266	DDX55	97	69.072	ENSXMAG00000011731	ddx55	99	73.024	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function