EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000007308 (Gene tree)
Gene ID: 517979
Gene Symbol: EDC3
Alias: -
Full Name: Bos taurus enhancer of mRNA decapping 3 (EDC3)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 55491 bases
Position: chr21:33991423-34046913
Accession: NM_001031758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000009613	FDF	PF09532.10	9.3e-19	1	1
ENSBTAP00000063895	FDF	PF09532.10	9.3e-19	1	1
ENSBTAP00000038539	LSM14	PF12701.7	2.7e-10	1	1
ENSBTAP00000009613	LSM14	PF12701.7	8.6e-10	1	1
ENSBTAP00000063895	LSM14	PF12701.7	8.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000009613	-	3974	XM_005221958	ENSBTAP00000009613	508 (aa)	XP_005222015	E1BEA2
ENSBTAT00000038729	-	1497	-	ENSBTAP00000038539	266 (aa)	-	Q58DQ8
ENSBTAT00000068211	-	4075	XM_005221959	ENSBTAP00000063895	508 (aa)	XP_005222016	UPI00005BF630

Gene Model

Click here to download ENSBTAG00000007308's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000007308's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000007308	EDC3	100	97.244	ENSG00000179151	EDC3	100	100.000	Homo_sapiens
ENSBTAG00000007308	EDC3	100	55.728	ENSAPOG00000008655	EDC3	100	55.728	Acanthochromis_polyacanthus
ENSBTAG00000007308	EDC3	100	70.000	ENSAPOG00000010791	edc3	100	70.000	Acanthochromis_polyacanthus
ENSBTAG00000007308	EDC3	100	96.654	ENSAMEG00000008963	EDC3	100	96.654	Ailuropoda_melanoleuca
ENSBTAG00000007308	EDC3	100	68.566	ENSACIG00000017751	edc3	100	68.566	Amphilophus_citrinellus
ENSBTAG00000007308	EDC3	99	59.649	ENSACIG00000005330	EDC3	99	59.649	Amphilophus_citrinellus
ENSBTAG00000007308	EDC3	100	70.000	ENSAOCG00000005431	edc3	100	70.000	Amphiprion_ocellaris
ENSBTAG00000007308	EDC3	100	58.140	ENSAOCG00000009103	-	100	58.140	Amphiprion_ocellaris
ENSBTAG00000007308	EDC3	100	58.140	ENSAPEG00000007841	EDC3	100	58.140	Amphiprion_percula
ENSBTAG00000007308	EDC3	100	70.000	ENSAPEG00000000968	edc3	100	70.000	Amphiprion_percula
ENSBTAG00000007308	EDC3	100	58.857	ENSATEG00000004205	-	100	58.857	Anabas_testudineus
ENSBTAG00000007308	EDC3	100	69.941	ENSATEG00000015505	edc3	100	69.941	Anabas_testudineus
ENSBTAG00000007308	EDC3	90	87.033	ENSAPLG00000008957	EDC3	100	87.033	Anas_platyrhynchos
ENSBTAG00000007308	EDC3	78	86.650	ENSACAG00000000460	-	100	86.650	Anolis_carolinensis
ENSBTAG00000007308	EDC3	100	97.047	ENSANAG00000024078	EDC3	100	97.047	Aotus_nancymaae
ENSBTAG00000007308	EDC3	99	58.869	ENSACLG00000018776	-	99	58.869	Astatotilapia_calliptera
ENSBTAG00000007308	EDC3	100	67.583	ENSACLG00000007232	edc3	100	67.583	Astatotilapia_calliptera
ENSBTAG00000007308	EDC3	100	69.981	ENSAMXG00000001589	edc3	100	69.981	Astyanax_mexicanus
ENSBTAG00000007308	EDC3	100	97.244	ENSCJAG00000017681	EDC3	100	97.244	Callithrix_jacchus
ENSBTAG00000007308	EDC3	100	96.850	ENSCAFG00000017935	EDC3	100	96.850	Canis_familiaris
ENSBTAG00000007308	EDC3	100	96.850	ENSCAFG00020003909	EDC3	100	96.850	Canis_lupus_dingo
ENSBTAG00000007308	EDC3	100	99.409	ENSCHIG00000023658	EDC3	100	99.409	Capra_hircus
ENSBTAG00000007308	EDC3	100	96.457	ENSTSYG00000004822	EDC3	100	96.457	Carlito_syrichta
ENSBTAG00000007308	EDC3	100	94.882	ENSCPOG00000015595	EDC3	100	94.882	Cavia_porcellus
ENSBTAG00000007308	EDC3	100	97.441	ENSCCAG00000021663	EDC3	100	97.441	Cebus_capucinus
ENSBTAG00000007308	EDC3	100	97.047	ENSCATG00000037511	EDC3	100	97.047	Cercocebus_atys
ENSBTAG00000007308	EDC3	100	94.685	ENSCLAG00000005700	EDC3	100	94.685	Chinchilla_lanigera
ENSBTAG00000007308	EDC3	100	97.047	ENSCSAG00000014239	EDC3	100	97.047	Chlorocebus_sabaeus
ENSBTAG00000007308	EDC3	100	89.173	ENSCPBG00000024239	EDC3	100	89.173	Chrysemys_picta_bellii
ENSBTAG00000007308	EDC3	100	38.077	ENSCING00000022142	-	99	38.077	Ciona_intestinalis
ENSBTAG00000007308	EDC3	100	97.047	ENSCANG00000028699	EDC3	100	97.047	Colobus_angolensis_palliatus
ENSBTAG00000007308	EDC3	100	96.063	ENSCGRG00001013874	Edc3	100	96.063	Cricetulus_griseus_chok1gshd
ENSBTAG00000007308	EDC3	100	96.063	ENSCGRG00000011885	Edc3	100	96.063	Cricetulus_griseus_crigri
ENSBTAG00000007308	EDC3	99	69.291	ENSCSEG00000012996	edc3	99	69.291	Cynoglossus_semilaevis
ENSBTAG00000007308	EDC3	100	69.608	ENSCVAG00000008023	edc3	100	69.608	Cyprinodon_variegatus
ENSBTAG00000007308	EDC3	99	68.824	ENSDARG00000051931	edc3	99	69.216	Danio_rerio
ENSBTAG00000007308	EDC3	100	84.109	ENSDNOG00000030661	EDC3	100	84.109	Dasypus_novemcinctus
ENSBTAG00000007308	EDC3	64	98.148	ENSETEG00000002398	-	64	98.148	Echinops_telfairi
ENSBTAG00000007308	EDC3	100	96.850	ENSEASG00005005071	EDC3	100	96.850	Equus_asinus_asinus
ENSBTAG00000007308	EDC3	100	96.850	ENSECAG00000017994	EDC3	100	96.850	Equus_caballus
ENSBTAG00000007308	EDC3	100	62.840	ENSELUG00000007607	EDC3	100	62.840	Esox_lucius
ENSBTAG00000007308	EDC3	100	65.497	ENSELUG00000005794	edc3	100	65.497	Esox_lucius
ENSBTAG00000007308	EDC3	100	96.457	ENSFCAG00000002014	EDC3	100	96.457	Felis_catus
ENSBTAG00000007308	EDC3	98	84.770	ENSFALG00000004543	EDC3	96	84.770	Ficedula_albicollis
ENSBTAG00000007308	EDC3	100	93.898	ENSFDAG00000012582	EDC3	100	93.898	Fukomys_damarensis
ENSBTAG00000007308	EDC3	100	69.804	ENSFHEG00000009375	edc3	100	69.804	Fundulus_heteroclitus
ENSBTAG00000007308	EDC3	100	68.359	ENSGMOG00000002715	edc3	100	68.359	Gadus_morhua
ENSBTAG00000007308	EDC3	100	88.386	ENSGALG00000040181	EDC3	100	88.386	Gallus_gallus
ENSBTAG00000007308	EDC3	100	68.173	ENSGAFG00000014433	edc3	100	68.173	Gambusia_affinis
ENSBTAG00000007308	EDC3	100	68.369	ENSGACG00000009783	edc3	100	68.369	Gasterosteus_aculeatus
ENSBTAG00000007308	EDC3	99	55.278	ENSGACG00000014671	EDC3	99	55.945	Gasterosteus_aculeatus
ENSBTAG00000007308	EDC3	100	88.780	ENSGAGG00000023477	EDC3	100	88.780	Gopherus_agassizii
ENSBTAG00000007308	EDC3	100	97.441	ENSGGOG00000003552	EDC3	100	97.441	Gorilla_gorilla
ENSBTAG00000007308	EDC3	99	58.869	ENSHBUG00000020817	EDC3	99	58.869	Haplochromis_burtoni
ENSBTAG00000007308	EDC3	100	67.583	ENSHBUG00000003635	edc3	100	67.583	Haplochromis_burtoni
ENSBTAG00000007308	EDC3	100	67.319	ENSHCOG00000016834	edc3	100	68.689	Hippocampus_comes
ENSBTAG00000007308	EDC3	99	70.254	ENSIPUG00000005695	edc3	100	70.254	Ictalurus_punctatus
ENSBTAG00000007308	EDC3	100	97.244	ENSSTOG00000013936	EDC3	100	97.244	Ictidomys_tridecemlineatus
ENSBTAG00000007308	EDC3	100	96.063	ENSJJAG00000008074	Edc3	100	96.063	Jaculus_jaculus
ENSBTAG00000007308	EDC3	100	55.315	ENSKMAG00000001987	EDC3	100	55.315	Kryptolebias_marmoratus
ENSBTAG00000007308	EDC3	100	69.155	ENSKMAG00000001243	edc3	100	69.155	Kryptolebias_marmoratus
ENSBTAG00000007308	EDC3	100	68.824	ENSLBEG00000013435	edc3	99	68.824	Labrus_bergylta
ENSBTAG00000007308	EDC3	100	59.109	ENSLBEG00000017984	EDC3	100	59.109	Labrus_bergylta
ENSBTAG00000007308	EDC3	100	77.670	ENSLACG00000014149	EDC3	100	77.670	Latimeria_chalumnae
ENSBTAG00000007308	EDC3	99	67.188	ENSLOCG00000014625	edc3	99	67.251	Lepisosteus_oculatus
ENSBTAG00000007308	EDC3	100	96.260	ENSLAFG00000002992	EDC3	100	96.260	Loxodonta_africana
ENSBTAG00000007308	EDC3	100	96.850	ENSMFAG00000043074	EDC3	100	96.850	Macaca_fascicularis
ENSBTAG00000007308	EDC3	100	96.850	ENSMMUG00000011071	EDC3	100	96.850	Macaca_mulatta
ENSBTAG00000007308	EDC3	100	96.850	ENSMNEG00000035316	EDC3	100	96.850	Macaca_nemestrina
ENSBTAG00000007308	EDC3	100	97.047	ENSMLEG00000030372	EDC3	100	97.047	Mandrillus_leucophaeus
ENSBTAG00000007308	EDC3	99	57.031	ENSMAMG00000005423	-	99	57.031	Mastacembelus_armatus
ENSBTAG00000007308	EDC3	100	69.745	ENSMAMG00000000505	edc3	100	69.745	Mastacembelus_armatus
ENSBTAG00000007308	EDC3	99	58.984	ENSMZEG00005005654	EDC3	99	58.984	Maylandia_zebra
ENSBTAG00000007308	EDC3	100	67.583	ENSMZEG00005004892	edc3	100	67.583	Maylandia_zebra
ENSBTAG00000007308	EDC3	100	87.402	ENSMGAG00000002617	EDC3	100	87.402	Meleagris_gallopavo
ENSBTAG00000007308	EDC3	100	96.457	ENSMICG00000043190	EDC3	100	96.457	Microcebus_murinus
ENSBTAG00000007308	EDC3	100	95.866	ENSMOCG00000016205	Edc3	100	95.866	Microtus_ochrogaster
ENSBTAG00000007308	EDC3	99	68.959	ENSMMOG00000012278	edc3	99	68.959	Mola_mola
ENSBTAG00000007308	EDC3	100	92.913	ENSMODG00000009442	EDC3	100	92.913	Monodelphis_domestica
ENSBTAG00000007308	EDC3	100	69.216	ENSMALG00000008658	edc3	100	69.548	Monopterus_albus
ENSBTAG00000007308	EDC3	100	95.079	MGP_CAROLIEiJ_G0032280	Edc3	100	98.462	Mus_caroli
ENSBTAG00000007308	EDC3	100	95.079	ENSMUSG00000038957	Edc3	100	98.462	Mus_musculus
ENSBTAG00000007308	EDC3	100	95.276	MGP_PahariEiJ_G0015146	Edc3	100	98.462	Mus_pahari
ENSBTAG00000007308	EDC3	100	94.882	MGP_SPRETEiJ_G0033420	Edc3	100	98.462	Mus_spretus
ENSBTAG00000007308	EDC3	100	96.850	ENSMPUG00000017293	EDC3	100	96.850	Mustela_putorius_furo
ENSBTAG00000007308	EDC3	100	96.275	ENSMLUG00000016382	EDC3	100	96.275	Myotis_lucifugus
ENSBTAG00000007308	EDC3	100	95.472	ENSNGAG00000010923	Edc3	100	95.472	Nannospalax_galili
ENSBTAG00000007308	EDC3	100	67.780	ENSNBRG00000002434	edc3	100	67.780	Neolamprologus_brichardi
ENSBTAG00000007308	EDC3	99	59.180	ENSNBRG00000007881	EDC3	99	59.180	Neolamprologus_brichardi
ENSBTAG00000007308	EDC3	100	87.795	ENSNLEG00000014577	EDC3	100	87.795	Nomascus_leucogenys
ENSBTAG00000007308	EDC3	100	91.535	ENSMEUG00000009077	EDC3	100	91.535	Notamacropus_eugenii
ENSBTAG00000007308	EDC3	79	96.296	ENSOPRG00000009540	-	79	96.296	Ochotona_princeps
ENSBTAG00000007308	EDC3	100	60.311	ENSONIG00000002932	-	100	60.311	Oreochromis_niloticus
ENSBTAG00000007308	EDC3	100	67.780	ENSONIG00000008434	edc3	100	67.780	Oreochromis_niloticus
ENSBTAG00000007308	EDC3	58	79.085	ENSOANG00000030799	-	95	79.085	Ornithorhynchus_anatinus
ENSBTAG00000007308	EDC3	91	80.913	ENSOCUG00000017740	EDC3	86	91.436	Oryctolagus_cuniculus
ENSBTAG00000007308	EDC3	100	67.191	ENSORLG00000004883	edc3	100	67.191	Oryzias_latipes
ENSBTAG00000007308	EDC3	100	56.836	ENSORLG00000014399	-	98	56.836	Oryzias_latipes
ENSBTAG00000007308	EDC3	100	67.191	ENSORLG00020012262	edc3	100	67.191	Oryzias_latipes_hni
ENSBTAG00000007308	EDC3	100	56.836	ENSORLG00020019446	-	100	56.836	Oryzias_latipes_hni
ENSBTAG00000007308	EDC3	100	56.445	ENSORLG00015017635	-	96	56.445	Oryzias_latipes_hsok
ENSBTAG00000007308	EDC3	100	66.992	ENSORLG00015005634	edc3	100	66.992	Oryzias_latipes_hsok
ENSBTAG00000007308	EDC3	100	68.566	ENSOMEG00000014026	edc3	100	68.566	Oryzias_melastigma
ENSBTAG00000007308	EDC3	100	56.836	ENSOMEG00000017354	EDC3	100	56.836	Oryzias_melastigma
ENSBTAG00000007308	EDC3	100	96.654	ENSOGAG00000014441	EDC3	100	96.654	Otolemur_garnettii
ENSBTAG00000007308	EDC3	100	99.018	ENSOARG00000003476	EDC3	100	99.018	Ovis_aries
ENSBTAG00000007308	EDC3	100	97.441	ENSPPAG00000040143	EDC3	100	97.441	Pan_paniscus
ENSBTAG00000007308	EDC3	100	96.850	ENSPPRG00000006257	EDC3	100	96.850	Panthera_pardus
ENSBTAG00000007308	EDC3	100	96.850	ENSPTIG00000017424	EDC3	100	96.850	Panthera_tigris_altaica
ENSBTAG00000007308	EDC3	100	97.441	ENSPTRG00000007279	EDC3	100	97.441	Pan_troglodytes
ENSBTAG00000007308	EDC3	100	97.047	ENSPANG00000015997	EDC3	100	97.047	Papio_anubis
ENSBTAG00000007308	EDC3	100	67.969	ENSPKIG00000004416	edc3	100	68.945	Paramormyrops_kingsleyae
ENSBTAG00000007308	EDC3	100	66.406	ENSPKIG00000019810	EDC3	100	66.406	Paramormyrops_kingsleyae
ENSBTAG00000007308	EDC3	100	83.268	ENSPSIG00000008474	EDC3	100	83.268	Pelodiscus_sinensis
ENSBTAG00000007308	EDC3	100	67.319	ENSPMGG00000007223	edc3	100	67.319	Periophthalmus_magnuspinnatus
ENSBTAG00000007308	EDC3	100	95.669	ENSPEMG00000015260	Edc3	100	95.669	Peromyscus_maniculatus_bairdii
ENSBTAG00000007308	EDC3	100	90.354	ENSPCIG00000006276	EDC3	70	90.533	Phascolarctos_cinereus
ENSBTAG00000007308	EDC3	100	69.066	ENSPFOG00000012204	edc3	100	69.352	Poecilia_formosa
ENSBTAG00000007308	EDC3	100	69.066	ENSPLAG00000014420	edc3	100	69.352	Poecilia_latipinna
ENSBTAG00000007308	EDC3	100	69.066	ENSPMEG00000023289	edc3	100	69.352	Poecilia_mexicana
ENSBTAG00000007308	EDC3	100	69.352	ENSPREG00000016022	edc3	100	69.352	Poecilia_reticulata
ENSBTAG00000007308	EDC3	100	96.260	ENSPPYG00000006642	EDC3	100	96.260	Pongo_abelii
ENSBTAG00000007308	EDC3	88	100.000	ENSPCAG00000002802	EDC3	88	100.000	Procavia_capensis
ENSBTAG00000007308	EDC3	100	96.260	ENSPCOG00000013364	EDC3	100	96.260	Propithecus_coquereli
ENSBTAG00000007308	EDC3	100	96.063	ENSPVAG00000014733	EDC3	100	96.063	Pteropus_vampyrus
ENSBTAG00000007308	EDC3	100	67.583	ENSPNYG00000021797	edc3	100	67.583	Pundamilia_nyererei
ENSBTAG00000007308	EDC3	99	58.869	ENSPNYG00000009669	EDC3	99	58.869	Pundamilia_nyererei
ENSBTAG00000007308	EDC3	100	69.591	ENSPNAG00000019657	edc3	100	69.981	Pygocentrus_nattereri
ENSBTAG00000007308	EDC3	99	95.644	ENSRNOG00000019579	Edc3	99	95.644	Rattus_norvegicus
ENSBTAG00000007308	EDC3	100	96.654	ENSRBIG00000019488	EDC3	100	96.654	Rhinopithecus_bieti
ENSBTAG00000007308	EDC3	100	96.654	ENSRROG00000034959	EDC3	100	96.654	Rhinopithecus_roxellana
ENSBTAG00000007308	EDC3	100	97.441	ENSSBOG00000004896	EDC3	100	97.441	Saimiri_boliviensis_boliviensis
ENSBTAG00000007308	EDC3	96	91.207	ENSSHAG00000015075	EDC3	95	91.207	Sarcophilus_harrisii
ENSBTAG00000007308	EDC3	100	62.157	ENSSFOG00015002439	edc3	100	65.370	Scleropages_formosus
ENSBTAG00000007308	EDC3	100	70.428	ENSSFOG00015016939	edc3	100	70.623	Scleropages_formosus
ENSBTAG00000007308	EDC3	99	57.640	ENSSMAG00000010176	-	99	57.640	Scophthalmus_maximus
ENSBTAG00000007308	EDC3	100	68.566	ENSSMAG00000010695	edc3	100	69.352	Scophthalmus_maximus
ENSBTAG00000007308	EDC3	100	69.216	ENSSDUG00000021844	edc3	100	69.941	Seriola_dumerili
ENSBTAG00000007308	EDC3	100	59.231	ENSSDUG00000007671	EDC3	100	59.615	Seriola_dumerili
ENSBTAG00000007308	EDC3	100	69.216	ENSSLDG00000022046	edc3	100	69.941	Seriola_lalandi_dorsalis
ENSBTAG00000007308	EDC3	81	95.565	ENSSARG00000003907	EDC3	80	95.565	Sorex_araneus
ENSBTAG00000007308	EDC3	100	88.189	ENSSPUG00000008232	EDC3	100	88.189	Sphenodon_punctatus
ENSBTAG00000007308	EDC3	100	57.977	ENSSPAG00000020327	EDC3	100	58.171	Stegastes_partitus
ENSBTAG00000007308	EDC3	100	70.196	ENSSPAG00000010009	edc3	100	70.196	Stegastes_partitus
ENSBTAG00000007308	EDC3	100	97.047	ENSSSCG00000001903	EDC3	100	97.047	Sus_scrofa
ENSBTAG00000007308	EDC3	100	88.386	ENSTGUG00000004007	EDC3	100	88.386	Taeniopygia_guttata
ENSBTAG00000007308	EDC3	100	69.941	ENSTRUG00000017078	edc3	100	69.941	Takifugu_rubripes
ENSBTAG00000007308	EDC3	100	68.493	ENSTNIG00000016047	edc3	100	68.493	Tetraodon_nigroviridis
ENSBTAG00000007308	EDC3	100	96.850	ENSTTRG00000007990	EDC3	100	96.850	Tursiops_truncatus
ENSBTAG00000007308	EDC3	100	96.654	ENSUAMG00000026710	-	100	96.654	Ursus_americanus
ENSBTAG00000007308	EDC3	100	96.654	ENSUMAG00000005006	EDC3	96	96.654	Ursus_maritimus
ENSBTAG00000007308	EDC3	79	87.037	ENSVPAG00000003499	-	79	87.037	Vicugna_pacos
ENSBTAG00000007308	EDC3	100	97.047	ENSVVUG00000018601	EDC3	100	97.047	Vulpes_vulpes
ENSBTAG00000007308	EDC3	68	82.184	ENSXETG00000010622	edc3	99	83.333	Xenopus_tropicalis
ENSBTAG00000007308	EDC3	100	69.155	ENSXMAG00000007377	edc3	100	69.155	Xiphophorus_maculatus