EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000007474 (Gene tree)
Gene ID: 789999
Gene Symbol: EIF3B
Alias: -
Full Name: Bos taurus eukaryotic translation initiation factor 3 subunit B (EIF3B)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 18977 bases
Position: chr25:40885875-40904851
Accession: NM_001102356
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000009832	RRM_1	PF00076.22	1.1e-07	1	1
ENSBTAP00000060466	RRM_1	PF00076.22	1.1e-07	1	1
ENSBTAP00000009832	eIF2A	PF08662.11	6.1e-72	1	1
ENSBTAP00000060466	eIF2A	PF08662.11	6.1e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000009832	-	3631	-	ENSBTAP00000009832	786 (aa)	-	A7MB16
ENSBTAT00000084055	-	2950	-	ENSBTAP00000060466	786 (aa)	-	UPI00015AC810

Gene Model

Click here to download ENSBTAG00000007474's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000007474's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000007474	EIF3B	100	88.575	ENSG00000106263	EIF3B	100	99.346	Homo_sapiens
ENSBTAG00000007474	EIF3B	84	88.671	ENSAPOG00000002297	eif3bb	98	88.554	Acanthochromis_polyacanthus
ENSBTAG00000007474	EIF3B	84	88.671	ENSACIG00000015396	eif3bb	98	88.554	Amphilophus_citrinellus
ENSBTAG00000007474	EIF3B	84	88.520	ENSAOCG00000010921	eif3bb	98	88.404	Amphiprion_ocellaris
ENSBTAG00000007474	EIF3B	84	88.520	ENSAPEG00000000844	eif3bb	98	88.404	Amphiprion_percula
ENSBTAG00000007474	EIF3B	84	88.369	ENSATEG00000008626	eif3bb	98	88.253	Anabas_testudineus
ENSBTAG00000007474	EIF3B	82	93.673	ENSAPLG00000016062	EIF3B	100	93.673	Anas_platyrhynchos
ENSBTAG00000007474	EIF3B	84	92.998	ENSACAG00000008874	-	74	92.998	Anolis_carolinensis
ENSBTAG00000007474	EIF3B	100	89.578	ENSANAG00000020360	EIF3B	100	88.447	Aotus_nancymaae
ENSBTAG00000007474	EIF3B	84	87.915	ENSACLG00000000870	eif3bb	98	87.801	Astatotilapia_calliptera
ENSBTAG00000007474	EIF3B	86	86.074	ENSAMXG00000009773	eif3ba	99	86.074	Astyanax_mexicanus
ENSBTAG00000007474	EIF3B	85	33.801	WBGene00001225	eif-3.B	98	33.801	Caenorhabditis_elegans
ENSBTAG00000007474	EIF3B	100	88.889	ENSCJAG00000001442	EIF3B	100	88.409	Callithrix_jacchus
ENSBTAG00000007474	EIF3B	100	92.541	ENSCAFG00000016418	EIF3B	97	93.300	Canis_familiaris
ENSBTAG00000007474	EIF3B	100	89.886	ENSCAFG00020020771	EIF3B	100	90.645	Canis_lupus_dingo
ENSBTAG00000007474	EIF3B	100	98.350	ENSCHIG00000009941	EIF3B	100	98.350	Capra_hircus
ENSBTAG00000007474	EIF3B	87	92.722	ENSTSYG00000008256	EIF3B	99	94.196	Carlito_syrichta
ENSBTAG00000007474	EIF3B	79	85.805	ENSCAPG00000006394	-	99	85.805	Cavia_aperea
ENSBTAG00000007474	EIF3B	82	91.204	ENSCAPG00000009347	-	98	91.204	Cavia_aperea
ENSBTAG00000007474	EIF3B	97	89.494	ENSCPOG00000031410	-	100	87.391	Cavia_porcellus
ENSBTAG00000007474	EIF3B	97	89.610	ENSCPOG00000012541	-	100	88.622	Cavia_porcellus
ENSBTAG00000007474	EIF3B	100	88.519	ENSCCAG00000021556	EIF3B	96	99.142	Cebus_capucinus
ENSBTAG00000007474	EIF3B	100	89.435	ENSCATG00000040107	EIF3B	100	88.821	Cercocebus_atys
ENSBTAG00000007474	EIF3B	100	90.038	ENSCLAG00000006140	EIF3B	100	89.394	Chinchilla_lanigera
ENSBTAG00000007474	EIF3B	100	83.292	ENSCSAG00000017603	EIF3B	100	82.801	Chlorocebus_sabaeus
ENSBTAG00000007474	EIF3B	93	86.357	ENSCPBG00000020654	EIF3B	100	81.910	Chrysemys_picta_bellii
ENSBTAG00000007474	EIF3B	83	61.120	ENSCING00000003620	-	96	60.503	Ciona_intestinalis
ENSBTAG00000007474	EIF3B	87	96.821	ENSCANG00000042097	EIF3B	100	96.821	Colobus_angolensis_palliatus
ENSBTAG00000007474	EIF3B	100	89.169	ENSCGRG00001019278	Eif3b	100	89.421	Cricetulus_griseus_chok1gshd
ENSBTAG00000007474	EIF3B	100	88.736	ENSCGRG00000004618	Eif3b	100	88.736	Cricetulus_griseus_crigri
ENSBTAG00000007474	EIF3B	84	87.009	ENSCSEG00000020931	eif3bb	98	86.898	Cynoglossus_semilaevis
ENSBTAG00000007474	EIF3B	84	88.369	ENSCVAG00000015650	eif3bb	98	88.253	Cyprinodon_variegatus
ENSBTAG00000007474	EIF3B	84	87.349	ENSDARG00000059654	eif3ba	98	87.349	Danio_rerio
ENSBTAG00000007474	EIF3B	85	86.336	ENSDARG00000074213	eif3bb	99	86.336	Danio_rerio
ENSBTAG00000007474	EIF3B	90	94.382	ENSDNOG00000049572	EIF3B	100	85.091	Dasypus_novemcinctus
ENSBTAG00000007474	EIF3B	91	88.611	ENSDORG00000001401	Eif3b	100	84.576	Dipodomys_ordii
ENSBTAG00000007474	EIF3B	87	50.501	FBgn0034237	eIF3b	97	51.403	Drosophila_melanogaster
ENSBTAG00000007474	EIF3B	82	93.925	ENSETEG00000001719	EIF3B	99	93.925	Echinops_telfairi
ENSBTAG00000007474	EIF3B	87	74.123	ENSEBUG00000004379	eif3bb	96	75.753	Eptatretus_burgeri
ENSBTAG00000007474	EIF3B	100	92.982	ENSEASG00005021167	EIF3B	100	94.110	Equus_asinus_asinus
ENSBTAG00000007474	EIF3B	100	92.732	ENSECAG00000013671	EIF3B	100	93.860	Equus_caballus
ENSBTAG00000007474	EIF3B	73	96.089	ENSEEUG00000014359	EIF3B	88	96.089	Erinaceus_europaeus
ENSBTAG00000007474	EIF3B	85	87.779	ENSELUG00000021762	eif3bb	98	87.779	Esox_lucius
ENSBTAG00000007474	EIF3B	100	89.114	ENSFCAG00000005392	EIF3B	91	89.367	Felis_catus
ENSBTAG00000007474	EIF3B	90	88.178	ENSFALG00000013907	EIF3B	95	91.254	Ficedula_albicollis
ENSBTAG00000007474	EIF3B	93	92.769	ENSFDAG00000007558	EIF3B	97	87.628	Fukomys_damarensis
ENSBTAG00000007474	EIF3B	84	88.520	ENSFHEG00000002563	eif3bb	99	87.407	Fundulus_heteroclitus
ENSBTAG00000007474	EIF3B	84	83.259	ENSGMOG00000006100	eif3bb	98	83.259	Gadus_morhua
ENSBTAG00000007474	EIF3B	94	86.821	ENSGALG00000040999	EIF3B	99	81.671	Gallus_gallus
ENSBTAG00000007474	EIF3B	85	85.926	ENSGACG00000016738	eif3bb	98	85.926	Gasterosteus_aculeatus
ENSBTAG00000007474	EIF3B	99	82.868	ENSGAGG00000003659	EIF3B	95	81.887	Gopherus_agassizii
ENSBTAG00000007474	EIF3B	79	96.091	ENSGGOG00000016291	EIF3B	98	96.091	Gorilla_gorilla
ENSBTAG00000007474	EIF3B	84	87.915	ENSHBUG00000019329	eif3bb	98	87.801	Haplochromis_burtoni
ENSBTAG00000007474	EIF3B	100	88.005	ENSHGLG00000015253	EIF3B	100	88.005	Heterocephalus_glaber_female
ENSBTAG00000007474	EIF3B	100	85.878	ENSHGLG00100015005	EIF3B	86	96.880	Heterocephalus_glaber_male
ENSBTAG00000007474	EIF3B	82	88.545	ENSHCOG00000020583	eif3bb	98	87.988	Hippocampus_comes
ENSBTAG00000007474	EIF3B	85	88.271	ENSIPUG00000018347	eif3b	98	88.271	Ictalurus_punctatus
ENSBTAG00000007474	EIF3B	91	92.808	ENSSTOG00000021545	EIF3B	95	96.199	Ictidomys_tridecemlineatus
ENSBTAG00000007474	EIF3B	100	88.708	ENSJJAG00000014658	Eif3b	100	87.516	Jaculus_jaculus
ENSBTAG00000007474	EIF3B	84	87.764	ENSKMAG00000007432	eif3bb	99	86.667	Kryptolebias_marmoratus
ENSBTAG00000007474	EIF3B	84	88.973	ENSLBEG00000005233	eif3bb	98	88.855	Labrus_bergylta
ENSBTAG00000007474	EIF3B	85	90.625	ENSLACG00000010357	EIF3B	98	90.625	Latimeria_chalumnae
ENSBTAG00000007474	EIF3B	84	91.225	ENSLOCG00000004215	eif3bb	98	90.448	Lepisosteus_oculatus
ENSBTAG00000007474	EIF3B	100	88.679	ENSLAFG00000001540	EIF3B	100	88.310	Loxodonta_africana
ENSBTAG00000007474	EIF3B	100	89.962	ENSMFAG00000046100	EIF3B	100	89.474	Macaca_fascicularis
ENSBTAG00000007474	EIF3B	100	88.537	ENSMMUG00000015529	EIF3B	100	87.927	Macaca_mulatta
ENSBTAG00000007474	EIF3B	100	89.093	ENSMNEG00000042021	EIF3B	100	88.358	Macaca_nemestrina
ENSBTAG00000007474	EIF3B	85	98.659	ENSMLEG00000042295	EIF3B	99	98.659	Mandrillus_leucophaeus
ENSBTAG00000007474	EIF3B	84	88.822	ENSMAMG00000008654	eif3bb	98	88.705	Mastacembelus_armatus
ENSBTAG00000007474	EIF3B	84	87.915	ENSMZEG00005011827	eif3bb	98	87.801	Maylandia_zebra
ENSBTAG00000007474	EIF3B	82	93.673	ENSMGAG00000002719	EIF3B	100	93.673	Meleagris_gallopavo
ENSBTAG00000007474	EIF3B	100	89.155	ENSMAUG00000020259	Eif3b	100	89.281	Mesocricetus_auratus
ENSBTAG00000007474	EIF3B	100	89.383	ENSMICG00000010103	EIF3B	100	88.395	Microcebus_murinus
ENSBTAG00000007474	EIF3B	100	89.586	ENSMOCG00000000390	Eif3b	100	88.945	Microtus_ochrogaster
ENSBTAG00000007474	EIF3B	84	89.124	ENSMMOG00000003655	eif3bb	98	89.006	Mola_mola
ENSBTAG00000007474	EIF3B	85	97.598	ENSMODG00000009778	EIF3B	100	82.837	Monodelphis_domestica
ENSBTAG00000007474	EIF3B	84	80.981	ENSMALG00000002494	eif3bb	99	80.889	Monopterus_albus
ENSBTAG00000007474	EIF3B	100	88.682	MGP_CAROLIEiJ_G0027948	Eif3b	100	96.552	Mus_caroli
ENSBTAG00000007474	EIF3B	100	88.667	ENSMUSG00000056076	Eif3b	99	96.552	Mus_musculus
ENSBTAG00000007474	EIF3B	100	88.710	MGP_PahariEiJ_G0024520	Eif3b	100	96.552	Mus_pahari
ENSBTAG00000007474	EIF3B	100	88.806	MGP_SPRETEiJ_G0028952	Eif3b	100	96.552	Mus_spretus
ENSBTAG00000007474	EIF3B	83	97.713	ENSMPUG00000017919	EIF3B	99	97.713	Mustela_putorius_furo
ENSBTAG00000007474	EIF3B	87	96.633	ENSMLUG00000013740	EIF3B	100	96.633	Myotis_lucifugus
ENSBTAG00000007474	EIF3B	100	89.660	ENSNGAG00000016188	Eif3b	100	88.346	Nannospalax_galili
ENSBTAG00000007474	EIF3B	64	89.781	ENSNBRG00000008582	eif3bb	97	89.781	Neolamprologus_brichardi
ENSBTAG00000007474	EIF3B	99	79.950	ENSNLEG00000008647	EIF3B	100	80.451	Nomascus_leucogenys
ENSBTAG00000007474	EIF3B	65	98.729	ENSMEUG00000000880	EIF3B	78	98.729	Notamacropus_eugenii
ENSBTAG00000007474	EIF3B	82	93.302	ENSOPRG00000014504	EIF3B	99	93.302	Ochotona_princeps
ENSBTAG00000007474	EIF3B	100	81.084	ENSODEG00000012851	EIF3B	98	79.800	Octodon_degus
ENSBTAG00000007474	EIF3B	84	88.369	ENSONIG00000003283	eif3bb	98	88.253	Oreochromis_niloticus
ENSBTAG00000007474	EIF3B	76	98.003	ENSOANG00000004314	EIF3B	99	98.003	Ornithorhynchus_anatinus
ENSBTAG00000007474	EIF3B	86	96.302	ENSOCUG00000010289	EIF3B	99	96.302	Oryctolagus_cuniculus
ENSBTAG00000007474	EIF3B	84	88.333	ENSORLG00000008861	eif3bb	97	88.218	Oryzias_latipes
ENSBTAG00000007474	EIF3B	84	88.333	ENSORLG00020012732	eif3bb	97	88.218	Oryzias_latipes_hni
ENSBTAG00000007474	EIF3B	84	88.316	ENSORLG00015000357	eif3bb	97	88.218	Oryzias_latipes_hsok
ENSBTAG00000007474	EIF3B	84	87.424	ENSOMEG00000017895	eif3bb	97	87.311	Oryzias_melastigma
ENSBTAG00000007474	EIF3B	94	85.259	ENSOGAG00000006319	EIF3B	100	82.346	Otolemur_garnettii
ENSBTAG00000007474	EIF3B	89	93.030	ENSOARG00000005137	EIF3B	97	92.941	Ovis_aries
ENSBTAG00000007474	EIF3B	88	96.413	ENSPPAG00000032833	EIF3B	96	98.514	Pan_paniscus
ENSBTAG00000007474	EIF3B	100	92.551	ENSPPRG00000003071	EIF3B	100	92.677	Panthera_pardus
ENSBTAG00000007474	EIF3B	82	98.765	ENSPTIG00000013328	EIF3B	83	98.765	Panthera_tigris_altaica
ENSBTAG00000007474	EIF3B	100	90.088	ENSPTRG00000018860	EIF3B	100	89.322	Pan_troglodytes
ENSBTAG00000007474	EIF3B	100	90.088	ENSPTRG00000046041	-	100	89.322	Pan_troglodytes
ENSBTAG00000007474	EIF3B	100	89.962	ENSPANG00000014557	EIF3B	100	89.573	Papio_anubis
ENSBTAG00000007474	EIF3B	84	89.124	ENSPKIG00000009981	eif3ba	98	89.474	Paramormyrops_kingsleyae
ENSBTAG00000007474	EIF3B	88	86.272	ENSPKIG00000011735	eif3bb	99	88.279	Paramormyrops_kingsleyae
ENSBTAG00000007474	EIF3B	93	86.731	ENSPSIG00000009889	EIF3B	93	92.183	Pelodiscus_sinensis
ENSBTAG00000007474	EIF3B	86	87.556	ENSPMGG00000016466	eif3bb	99	87.556	Periophthalmus_magnuspinnatus
ENSBTAG00000007474	EIF3B	100	89.014	ENSPEMG00000021554	Eif3b	100	88.889	Peromyscus_maniculatus_bairdii
ENSBTAG00000007474	EIF3B	81	76.656	ENSPMAG00000005331	eif3bb	97	77.476	Petromyzon_marinus
ENSBTAG00000007474	EIF3B	82	98.302	ENSPCIG00000009464	EIF3B	98	98.302	Phascolarctos_cinereus
ENSBTAG00000007474	EIF3B	84	88.973	ENSPFOG00000001449	eif3bb	98	88.855	Poecilia_formosa
ENSBTAG00000007474	EIF3B	84	83.686	ENSPLAG00000005120	eif3bb	98	83.584	Poecilia_latipinna
ENSBTAG00000007474	EIF3B	84	88.973	ENSPMEG00000015157	eif3bb	99	88.855	Poecilia_mexicana
ENSBTAG00000007474	EIF3B	84	89.124	ENSPREG00000006422	eif3bb	98	89.006	Poecilia_reticulata
ENSBTAG00000007474	EIF3B	99	88.010	ENSPPYG00000017313	EIF3B	93	87.886	Pongo_abelii
ENSBTAG00000007474	EIF3B	54	98.969	ENSPCAG00000010455	-	70	98.969	Procavia_capensis
ENSBTAG00000007474	EIF3B	100	87.975	ENSPCOG00000025894	EIF3B	100	86.887	Propithecus_coquereli
ENSBTAG00000007474	EIF3B	82	98.131	ENSPVAG00000013735	EIF3B	92	98.131	Pteropus_vampyrus
ENSBTAG00000007474	EIF3B	84	75.227	ENSPNYG00000014859	eif3bb	97	75.151	Pundamilia_nyererei
ENSBTAG00000007474	EIF3B	86	87.259	ENSPNAG00000021677	eif3ba	99	87.259	Pygocentrus_nattereri
ENSBTAG00000007474	EIF3B	100	89.335	ENSRNOG00000001253	Eif3b	100	88.582	Rattus_norvegicus
ENSBTAG00000007474	EIF3B	89	98.918	ENSRBIG00000030590	EIF3B	100	98.918	Rhinopithecus_bieti
ENSBTAG00000007474	EIF3B	100	90.088	ENSRROG00000035023	EIF3B	100	89.573	Rhinopithecus_roxellana
ENSBTAG00000007474	EIF3B	80	30.846	YOR361C	PRT1	85	31.603	Saccharomyces_cerevisiae
ENSBTAG00000007474	EIF3B	94	90.837	ENSSBOG00000001954	EIF3B	96	89.276	Saimiri_boliviensis_boliviensis
ENSBTAG00000007474	EIF3B	100	83.493	ENSSHAG00000001063	EIF3B	100	84.053	Sarcophilus_harrisii
ENSBTAG00000007474	EIF3B	85	89.624	ENSSFOG00015006390	eif3bb	98	89.624	Scleropages_formosus
ENSBTAG00000007474	EIF3B	84	89.275	ENSSFOG00015005824	eif3ba	99	88.000	Scleropages_formosus
ENSBTAG00000007474	EIF3B	86	86.222	ENSSMAG00000021264	eif3bb	99	86.222	Scophthalmus_maximus
ENSBTAG00000007474	EIF3B	84	88.973	ENSSDUG00000016761	eif3bb	98	88.855	Seriola_dumerili
ENSBTAG00000007474	EIF3B	84	88.822	ENSSLDG00000022874	eif3bb	98	88.705	Seriola_lalandi_dorsalis
ENSBTAG00000007474	EIF3B	82	97.819	ENSSARG00000006036	EIF3B	99	97.819	Sorex_araneus
ENSBTAG00000007474	EIF3B	83	92.683	ENSSPUG00000001870	EIF3B	99	93.364	Sphenodon_punctatus
ENSBTAG00000007474	EIF3B	84	88.822	ENSSPAG00000013403	eif3bb	98	88.705	Stegastes_partitus
ENSBTAG00000007474	EIF3B	100	94.911	ENSSSCG00000039390	EIF3B	100	93.384	Sus_scrofa
ENSBTAG00000007474	EIF3B	85	92.227	ENSTGUG00000008140	EIF3B	100	92.227	Taeniopygia_guttata
ENSBTAG00000007474	EIF3B	84	88.369	ENSTRUG00000011064	eif3bb	98	88.253	Takifugu_rubripes
ENSBTAG00000007474	EIF3B	84	87.538	ENSTNIG00000004648	eif3bb	99	87.538	Tetraodon_nigroviridis
ENSBTAG00000007474	EIF3B	99	78.765	ENSTBEG00000012836	EIF3B	93	78.765	Tupaia_belangeri
ENSBTAG00000007474	EIF3B	99	84.123	ENSTTRG00000014713	EIF3B	92	84.251	Tursiops_truncatus
ENSBTAG00000007474	EIF3B	100	85.369	ENSUAMG00000000800	EIF3B	99	97.866	Ursus_americanus
ENSBTAG00000007474	EIF3B	88	94.630	ENSUMAG00000007200	EIF3B	100	99.049	Ursus_maritimus
ENSBTAG00000007474	EIF3B	82	98.611	ENSVVUG00000004280	EIF3B	100	99.051	Vulpes_vulpes
ENSBTAG00000007474	EIF3B	84	90.744	ENSXETG00000020593	eif3b	97	90.469	Xenopus_tropicalis
ENSBTAG00000007474	EIF3B	82	87.597	ENSXCOG00000008279	eif3bb	98	87.199	Xiphophorus_couchianus
ENSBTAG00000007474	EIF3B	82	87.752	ENSXMAG00000004705	eif3bb	98	87.349	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001732	formation of cytoplasmic translation initiation complex	-	IEA	Process
GO:0003743	translation initiation factor activity	-	ISS	Function
GO:0005852	eukaryotic translation initiation factor 3 complex	-	ISS	Component
GO:0006413	translational initiation	-	ISS	Process
GO:0006446	regulation of translational initiation	-	ISS	Process
GO:0016282	eukaryotic 43S preinitiation complex	-	IEA	Component
GO:0031369	translation initiation factor binding	-	IEA	Function
GO:0033290	eukaryotic 48S preinitiation complex	-	IEA	Component
GO:0045202	synapse	-	IEA	Component
GO:0071541	eukaryotic translation initiation factor 3 complex, eIF3m	-	IEA	Component
GO:0075522	IRES-dependent viral translational initiation	-	IEA	Process
GO:0075525	viral translational termination-reinitiation	-	IEA	Process