EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000007508 (Gene tree)
Gene ID: 513877
Gene Symbol: SRBD1
Alias: -
Full Name: Bos taurus S1 RNA binding domain 1 (SRBD1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 244552 bases
Position: chr11:27806024-28050575
Accession: NM_001205772
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000056635	S1	PF00575.23	3.9e-09	1	1
ENSBTAP00000009881	S1	PF00575.23	4.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000066115	-	3478	-	ENSBTAP00000056635	938 (aa)	-	G3N3X2
ENSBTAT00000009881	-	3699	XM_005212608	ENSBTAP00000009881	1026 (aa)	XP_005212665	E1BIF3

Gene Model

Click here to download ENSBTAG00000007508's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000007508's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000007508	SRBD1	97	89.056	ENSG00000068784	SRBD1	100	88.353	Homo_sapiens
ENSBTAG00000007508	SRBD1	99	50.197	ENSAPOG00000005103	si:ch211-117n7.8	83	58.608	Acanthochromis_polyacanthus
ENSBTAG00000007508	SRBD1	97	91.265	ENSAMEG00000005993	SRBD1	100	90.462	Ailuropoda_melanoleuca
ENSBTAG00000007508	SRBD1	80	58.076	ENSACIG00000009875	si:ch211-117n7.8	85	58.118	Amphilophus_citrinellus
ENSBTAG00000007508	SRBD1	99	50.248	ENSAOCG00000024718	si:ch211-117n7.8	99	49.851	Amphiprion_ocellaris
ENSBTAG00000007508	SRBD1	81	58.844	ENSAPEG00000002645	si:ch211-117n7.8	87	58.844	Amphiprion_percula
ENSBTAG00000007508	SRBD1	99	49.902	ENSATEG00000010844	si:ch211-117n7.8	84	57.951	Anabas_testudineus
ENSBTAG00000007508	SRBD1	97	71.116	ENSAPLG00000006313	SRBD1	100	70.788	Anas_platyrhynchos
ENSBTAG00000007508	SRBD1	97	87.952	ENSANAG00000025573	SRBD1	100	87.249	Aotus_nancymaae
ENSBTAG00000007508	SRBD1	99	49.365	ENSACLG00000024219	si:ch211-117n7.8	83	57.093	Astatotilapia_calliptera
ENSBTAG00000007508	SRBD1	89	56.726	ENSAMXG00000004294	SRBD1	93	56.095	Astyanax_mexicanus
ENSBTAG00000007508	SRBD1	71	30.417	WBGene00022830	ZK973.1	91	30.497	Caenorhabditis_elegans
ENSBTAG00000007508	SRBD1	97	87.349	ENSCJAG00000000727	SRBD1	100	86.546	Callithrix_jacchus
ENSBTAG00000007508	SRBD1	97	90.672	ENSCAFG00000002554	SRBD1	100	89.870	Canis_familiaris
ENSBTAG00000007508	SRBD1	100	93.671	ENSCAFG00020026284	SRBD1	99	89.907	Canis_lupus_dingo
ENSBTAG00000007508	SRBD1	100	96.881	ENSCHIG00000016535	SRBD1	100	96.881	Capra_hircus
ENSBTAG00000007508	SRBD1	97	90.271	ENSTSYG00000012797	SRBD1	100	89.669	Carlito_syrichta
ENSBTAG00000007508	SRBD1	99	93.038	ENSCPOG00000004773	SRBD1	94	93.038	Cavia_porcellus
ENSBTAG00000007508	SRBD1	97	88.554	ENSCCAG00000025589	SRBD1	100	87.851	Cebus_capucinus
ENSBTAG00000007508	SRBD1	97	89.859	ENSCATG00000039530	SRBD1	100	89.157	Cercocebus_atys
ENSBTAG00000007508	SRBD1	99	94.304	ENSCLAG00000008623	SRBD1	94	94.304	Chinchilla_lanigera
ENSBTAG00000007508	SRBD1	97	89.960	ENSCSAG00000013350	SRBD1	100	89.257	Chlorocebus_sabaeus
ENSBTAG00000007508	SRBD1	92	94.904	ENSCHOG00000003805	SRBD1	87	94.904	Choloepus_hoffmanni
ENSBTAG00000007508	SRBD1	99	81.646	ENSCPBG00000005677	SRBD1	100	73.615	Chrysemys_picta_bellii
ENSBTAG00000007508	SRBD1	76	42.132	ENSCING00000005950	-	99	42.132	Ciona_intestinalis
ENSBTAG00000007508	SRBD1	78	43.444	ENSCSAVG00000000861	-	99	43.444	Ciona_savignyi
ENSBTAG00000007508	SRBD1	96	89.336	ENSCANG00000016307	SRBD1	99	88.632	Colobus_angolensis_palliatus
ENSBTAG00000007508	SRBD1	97	84.269	ENSCGRG00001000513	Srbd1	100	84.168	Cricetulus_griseus_chok1gshd
ENSBTAG00000007508	SRBD1	97	84.269	ENSCGRG00000002283	Srbd1	100	84.168	Cricetulus_griseus_crigri
ENSBTAG00000007508	SRBD1	81	57.210	ENSCSEG00000000856	si:ch211-117n7.8	84	57.327	Cynoglossus_semilaevis
ENSBTAG00000007508	SRBD1	81	57.951	ENSCVAG00000020212	si:ch211-117n7.8	98	53.050	Cyprinodon_variegatus
ENSBTAG00000007508	SRBD1	97	89.790	ENSDNOG00000018686	SRBD1	100	89.089	Dasypus_novemcinctus
ENSBTAG00000007508	SRBD1	97	86.834	ENSDORG00000010468	Srbd1	100	86.834	Dipodomys_ordii
ENSBTAG00000007508	SRBD1	93	34.172	FBgn0051156	CG31156	98	34.382	Drosophila_melanogaster
ENSBTAG00000007508	SRBD1	86	82.531	ENSETEG00000000739	SRBD1	91	82.531	Echinops_telfairi
ENSBTAG00000007508	SRBD1	71	48.777	ENSEBUG00000008902	si:ch211-117n7.8	96	48.777	Eptatretus_burgeri
ENSBTAG00000007508	SRBD1	99	94.937	ENSEASG00005003132	SRBD1	97	94.904	Equus_asinus_asinus
ENSBTAG00000007508	SRBD1	99	94.304	ENSECAG00000013865	SRBD1	98	91.365	Equus_caballus
ENSBTAG00000007508	SRBD1	81	59.645	ENSELUG00000012592	si:ch211-117n7.8	81	59.645	Esox_lucius
ENSBTAG00000007508	SRBD1	97	92.369	ENSFCAG00000005101	SRBD1	100	91.667	Felis_catus
ENSBTAG00000007508	SRBD1	97	68.945	ENSFALG00000012966	SRBD1	100	68.569	Ficedula_albicollis
ENSBTAG00000007508	SRBD1	97	85.789	ENSFDAG00000016670	SRBD1	98	87.214	Fukomys_damarensis
ENSBTAG00000007508	SRBD1	81	57.833	ENSFHEG00000019480	si:ch211-117n7.8	82	57.833	Fundulus_heteroclitus
ENSBTAG00000007508	SRBD1	99	79.747	ENSGALG00000009990	SRBD1	94	79.747	Gallus_gallus
ENSBTAG00000007508	SRBD1	97	49.645	ENSGAFG00000019664	si:ch211-117n7.8	93	52.415	Gambusia_affinis
ENSBTAG00000007508	SRBD1	59	68.159	ENSGACG00000010794	si:ch211-117n7.8	100	61.600	Gasterosteus_aculeatus
ENSBTAG00000007508	SRBD1	81	81.055	ENSGAGG00000006166	SRBD1	99	81.055	Gopherus_agassizii
ENSBTAG00000007508	SRBD1	94	89.485	ENSGGOG00000005910	SRBD1	99	89.512	Gorilla_gorilla
ENSBTAG00000007508	SRBD1	86	47.826	ENSHBUG00000013207	si:ch211-117n7.8	97	45.106	Haplochromis_burtoni
ENSBTAG00000007508	SRBD1	96	87.311	ENSHGLG00000018153	-	99	86.606	Heterocephalus_glaber_female
ENSBTAG00000007508	SRBD1	96	87.110	ENSHGLG00100015183	-	99	86.405	Heterocephalus_glaber_male
ENSBTAG00000007508	SRBD1	83	60.443	ENSIPUG00000009661	srbd1	85	60.443	Ictalurus_punctatus
ENSBTAG00000007508	SRBD1	99	95.570	ENSSTOG00000005898	SRBD1	100	95.570	Ictidomys_tridecemlineatus
ENSBTAG00000007508	SRBD1	97	79.760	ENSJJAG00000022244	Srbd1	100	79.459	Jaculus_jaculus
ENSBTAG00000007508	SRBD1	99	49.902	ENSKMAG00000003473	si:ch211-117n7.8	99	51.354	Kryptolebias_marmoratus
ENSBTAG00000007508	SRBD1	97	50.202	ENSLBEG00000027518	si:ch211-117n7.8	97	51.807	Labrus_bergylta
ENSBTAG00000007508	SRBD1	83	71.949	ENSLACG00000009790	SRBD1	99	70.922	Latimeria_chalumnae
ENSBTAG00000007508	SRBD1	97	57.780	ENSLOCG00000016360	si:ch211-117n7.8	97	59.077	Lepisosteus_oculatus
ENSBTAG00000007508	SRBD1	97	89.960	ENSMFAG00000042026	SRBD1	100	89.257	Macaca_fascicularis
ENSBTAG00000007508	SRBD1	97	89.960	ENSMMUG00000003490	SRBD1	100	89.257	Macaca_mulatta
ENSBTAG00000007508	SRBD1	97	87.249	ENSMNEG00000034701	SRBD1	100	86.546	Macaca_nemestrina
ENSBTAG00000007508	SRBD1	97	89.759	ENSMLEG00000000745	SRBD1	100	89.056	Mandrillus_leucophaeus
ENSBTAG00000007508	SRBD1	80	56.511	ENSMAMG00000021921	si:ch211-117n7.8	84	56.353	Mastacembelus_armatus
ENSBTAG00000007508	SRBD1	99	49.365	ENSMZEG00005027369	si:ch211-117n7.8	83	57.093	Maylandia_zebra
ENSBTAG00000007508	SRBD1	78	79.245	ENSMGAG00000010273	SRBD1	99	76.101	Meleagris_gallopavo
ENSBTAG00000007508	SRBD1	77	86.118	ENSMAUG00000013916	Srbd1	95	86.118	Mesocricetus_auratus
ENSBTAG00000007508	SRBD1	97	90.863	ENSMICG00000007835	SRBD1	100	90.161	Microcebus_murinus
ENSBTAG00000007508	SRBD1	97	83.450	ENSMOCG00000018716	Srbd1	100	83.350	Microtus_ochrogaster
ENSBTAG00000007508	SRBD1	81	56.419	ENSMMOG00000007507	si:ch211-117n7.8	87	56.419	Mola_mola
ENSBTAG00000007508	SRBD1	99	50.000	ENSMALG00000001562	si:ch211-117n7.8	93	52.875	Monopterus_albus
ENSBTAG00000007508	SRBD1	97	80.522	MGP_CAROLIEiJ_G0021934	Srbd1	99	84.026	Mus_caroli
ENSBTAG00000007508	SRBD1	97	81.225	ENSMUSG00000024135	Srbd1	99	82.653	Mus_musculus
ENSBTAG00000007508	SRBD1	97	79.719	MGP_PahariEiJ_G0020924	Srbd1	100	79.116	Mus_pahari
ENSBTAG00000007508	SRBD1	97	81.426	MGP_SPRETEiJ_G0022850	Srbd1	100	80.723	Mus_spretus
ENSBTAG00000007508	SRBD1	97	87.751	ENSMLUG00000007039	SRBD1	100	87.048	Myotis_lucifugus
ENSBTAG00000007508	SRBD1	99	89.873	ENSNGAG00000011893	Srbd1	95	89.873	Nannospalax_galili
ENSBTAG00000007508	SRBD1	81	55.767	ENSNBRG00000012873	si:ch211-117n7.8	85	56.190	Neolamprologus_brichardi
ENSBTAG00000007508	SRBD1	97	89.257	ENSNLEG00000016877	SRBD1	100	88.554	Nomascus_leucogenys
ENSBTAG00000007508	SRBD1	97	85.714	ENSODEG00000012095	SRBD1	100	85.010	Octodon_degus
ENSBTAG00000007508	SRBD1	99	49.412	ENSONIG00000000945	si:ch211-117n7.8	99	58.463	Oreochromis_niloticus
ENSBTAG00000007508	SRBD1	99	95.570	ENSOCUG00000015385	SRBD1	100	89.759	Oryctolagus_cuniculus
ENSBTAG00000007508	SRBD1	97	47.305	ENSORLG00000004427	si:ch211-117n7.8	96	49.202	Oryzias_latipes
ENSBTAG00000007508	SRBD1	97	50.050	ENSORLG00020012792	si:ch211-117n7.8	84	56.307	Oryzias_latipes_hni
ENSBTAG00000007508	SRBD1	97	49.800	ENSORLG00015018598	si:ch211-117n7.8	84	56.028	Oryzias_latipes_hsok
ENSBTAG00000007508	SRBD1	81	56.161	ENSOMEG00000012229	si:ch211-117n7.8	82	56.754	Oryzias_melastigma
ENSBTAG00000007508	SRBD1	99	91.139	ENSOGAG00000001076	SRBD1	94	91.139	Otolemur_garnettii
ENSBTAG00000007508	SRBD1	99	97.516	ENSOARG00000005958	SRBD1	100	92.989	Ovis_aries
ENSBTAG00000007508	SRBD1	97	89.257	ENSPPAG00000038442	SRBD1	100	88.554	Pan_paniscus
ENSBTAG00000007508	SRBD1	97	92.269	ENSPPRG00000003449	SRBD1	100	91.566	Panthera_pardus
ENSBTAG00000007508	SRBD1	97	92.269	ENSPTIG00000012495	SRBD1	100	91.566	Panthera_tigris_altaica
ENSBTAG00000007508	SRBD1	97	89.257	ENSPTRG00000011889	SRBD1	100	88.554	Pan_troglodytes
ENSBTAG00000007508	SRBD1	97	89.558	ENSPANG00000008063	SRBD1	100	88.855	Papio_anubis
ENSBTAG00000007508	SRBD1	95	52.228	ENSPKIG00000021973	si:ch211-117n7.8	97	53.862	Paramormyrops_kingsleyae
ENSBTAG00000007508	SRBD1	97	73.716	ENSPSIG00000008992	SRBD1	100	73.716	Pelodiscus_sinensis
ENSBTAG00000007508	SRBD1	88	52.311	ENSPMGG00000013348	si:ch211-117n7.8	98	52.214	Periophthalmus_magnuspinnatus
ENSBTAG00000007508	SRBD1	97	81.845	ENSPEMG00000020684	Srbd1	100	81.747	Peromyscus_maniculatus_bairdii
ENSBTAG00000007508	SRBD1	97	49.850	ENSPFOG00000010650	si:ch211-117n7.8	83	57.244	Poecilia_formosa
ENSBTAG00000007508	SRBD1	97	50.150	ENSPLAG00000002141	si:ch211-117n7.8	83	56.890	Poecilia_latipinna
ENSBTAG00000007508	SRBD1	97	50.050	ENSPMEG00000018537	si:ch211-117n7.8	93	52.784	Poecilia_mexicana
ENSBTAG00000007508	SRBD1	99	49.457	ENSPREG00000003258	si:ch211-117n7.8	85	57.244	Poecilia_reticulata
ENSBTAG00000007508	SRBD1	99	80.591	ENSPPYG00000012444	SRBD1	99	79.945	Pongo_abelii
ENSBTAG00000007508	SRBD1	79	81.854	ENSPCAG00000005629	SRBD1	85	81.854	Procavia_capensis
ENSBTAG00000007508	SRBD1	97	78.100	ENSPCOG00000017669	SRBD1	100	77.400	Propithecus_coquereli
ENSBTAG00000007508	SRBD1	97	81.325	ENSPVAG00000001782	SRBD1	100	80.622	Pteropus_vampyrus
ENSBTAG00000007508	SRBD1	86	51.981	ENSPNYG00000000508	si:ch211-117n7.8	96	49.149	Pundamilia_nyererei
ENSBTAG00000007508	SRBD1	86	59.375	ENSPNAG00000013492	SRBD1	90	59.598	Pygocentrus_nattereri
ENSBTAG00000007508	SRBD1	97	79.397	ENSRNOG00000014720	Srbd1	99	80.101	Rattus_norvegicus
ENSBTAG00000007508	SRBD1	96	89.537	ENSRBIG00000033486	SRBD1	99	88.934	Rhinopithecus_bieti
ENSBTAG00000007508	SRBD1	96	89.537	ENSRROG00000041599	SRBD1	99	88.934	Rhinopithecus_roxellana
ENSBTAG00000007508	SRBD1	97	87.952	ENSSBOG00000024982	SRBD1	100	87.249	Saimiri_boliviensis_boliviensis
ENSBTAG00000007508	SRBD1	82	60.617	ENSSFOG00015001128	si:ch211-117n7.8	90	60.617	Scleropages_formosus
ENSBTAG00000007508	SRBD1	81	57.126	ENSSMAG00000018256	si:ch211-117n7.8	82	57.479	Scophthalmus_maximus
ENSBTAG00000007508	SRBD1	81	56.890	ENSSLDG00000023189	si:ch211-117n7.8	83	56.890	Seriola_lalandi_dorsalis
ENSBTAG00000007508	SRBD1	99	91.772	ENSSARG00000009740	SRBD1	100	78.894	Sorex_araneus
ENSBTAG00000007508	SRBD1	87	75.028	ENSSPUG00000010475	SRBD1	100	71.280	Sphenodon_punctatus
ENSBTAG00000007508	SRBD1	81	55.595	ENSSPAG00000008092	-	84	56.184	Stegastes_partitus
ENSBTAG00000007508	SRBD1	100	90.865	ENSSSCG00000008445	SRBD1	100	90.865	Sus_scrofa
ENSBTAG00000007508	SRBD1	82	80.945	ENSTGUG00000003878	SRBD1	100	77.284	Taeniopygia_guttata
ENSBTAG00000007508	SRBD1	99	50.000	ENSTRUG00000007080	si:ch211-117n7.8	92	57.647	Takifugu_rubripes
ENSBTAG00000007508	SRBD1	99	48.532	ENSTNIG00000007464	si:ch211-117n7.8	99	50.049	Tetraodon_nigroviridis
ENSBTAG00000007508	SRBD1	80	96.809	ENSTBEG00000004556	SRBD1	82	96.809	Tupaia_belangeri
ENSBTAG00000007508	SRBD1	93	97.468	ENSTTRG00000011871	SRBD1	94	94.009	Tursiops_truncatus
ENSBTAG00000007508	SRBD1	97	90.964	ENSUAMG00000008126	SRBD1	97	94.585	Ursus_americanus
ENSBTAG00000007508	SRBD1	100	89.126	ENSUMAG00000012902	SRBD1	100	88.350	Ursus_maritimus
ENSBTAG00000007508	SRBD1	88	93.577	ENSVPAG00000006825	SRBD1	99	93.577	Vicugna_pacos
ENSBTAG00000007508	SRBD1	99	91.064	ENSVVUG00000005389	SRBD1	100	91.064	Vulpes_vulpes
ENSBTAG00000007508	SRBD1	97	51.396	ENSXETG00000002760	srbd1	100	51.393	Xenopus_tropicalis
ENSBTAG00000007508	SRBD1	97	49.850	ENSXMAG00000016861	si:ch211-117n7.8	93	52.474	Xiphophorus_maculatus