EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000007606 (Gene tree)
Gene ID: 539950
Gene Symbol: HNRNPU
Alias: -
Full Name: Bos taurus heterogeneous nuclear ribonucleoprotein U (HNRNPU)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 16060 bases
Position: chr16:32404381-32420440
Accession: NM_001076920
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000062620	SAP	PF02037.27	3.8e-10	1	1
ENSBTAP00000048368	SAP	PF02037.27	3.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000052059	-	3403	-	ENSBTAP00000048368	825 (aa)	XP_024832162	A2VDN7
ENSBTAT00000086288	-	2538	-	ENSBTAP00000062620	804 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000007606's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000007606's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000007606	HNRNPU	82	48.714	ENSBTAG00000003168	HNRNPUL1	67	63.415
ENSBTAG00000007606	HNRNPU	70	46.299	ENSBTAG00000002510	HNRNPUL2	67	50.397

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000007606	HNRNPU	100	98.545	ENSG00000153187	HNRNPU	100	100.000	Homo_sapiens
ENSBTAG00000007606	HNRNPU	79	77.083	ENSAPOG00000017400	hnrnpub	87	77.083	Acanthochromis_polyacanthus
ENSBTAG00000007606	HNRNPU	100	95.157	ENSAMEG00000009145	HNRNPU	100	95.157	Ailuropoda_melanoleuca
ENSBTAG00000007606	HNRNPU	84	58.280	ENSACIG00000012138	hnrnpub	87	80.952	Amphilophus_citrinellus
ENSBTAG00000007606	HNRNPU	79	75.000	ENSAOCG00000015843	hnrnpub	89	61.538	Amphiprion_ocellaris
ENSBTAG00000007606	HNRNPU	79	75.000	ENSAPEG00000014679	hnrnpub	89	61.538	Amphiprion_percula
ENSBTAG00000007606	HNRNPU	73	72.549	ENSATEG00000016178	hnrnpub	81	59.571	Anabas_testudineus
ENSBTAG00000007606	HNRNPU	80	84.024	ENSACAG00000004511	HNRNPU	72	89.369	Anolis_carolinensis
ENSBTAG00000007606	HNRNPU	99	98.630	ENSANAG00000033895	-	99	99.060	Aotus_nancymaae
ENSBTAG00000007606	HNRNPU	78	83.333	ENSACLG00000008165	hnrnpub	85	83.333	Astatotilapia_calliptera
ENSBTAG00000007606	HNRNPU	100	98.424	ENSCJAG00000016914	HNRNPU	100	98.424	Callithrix_jacchus
ENSBTAG00000007606	HNRNPU	99	98.755	ENSCAFG00020000918	HNRNPU	99	98.755	Canis_lupus_dingo
ENSBTAG00000007606	HNRNPU	100	99.876	ENSCHIG00000004900	HNRNPU	100	99.876	Capra_hircus
ENSBTAG00000007606	HNRNPU	100	98.182	ENSCPOG00000011887	HNRNPU	100	98.182	Cavia_porcellus
ENSBTAG00000007606	HNRNPU	100	98.667	ENSCCAG00000037859	-	100	98.667	Cebus_capucinus
ENSBTAG00000007606	HNRNPU	100	98.424	ENSCATG00000035273	HNRNPU	100	98.424	Cercocebus_atys
ENSBTAG00000007606	HNRNPU	100	98.424	ENSCLAG00000007100	HNRNPU	100	98.424	Chinchilla_lanigera
ENSBTAG00000007606	HNRNPU	98	98.352	ENSCSAG00000009219	HNRNPU	98	98.352	Chlorocebus_sabaeus
ENSBTAG00000007606	HNRNPU	79	100.000	ENSCHOG00000001387	HNRNPU	79	100.000	Choloepus_hoffmanni
ENSBTAG00000007606	HNRNPU	100	80.024	ENSCPBG00000009415	HNRNPU	98	81.196	Chrysemys_picta_bellii
ENSBTAG00000007606	HNRNPU	100	94.303	ENSCANG00000022780	HNRNPU	98	96.894	Colobus_angolensis_palliatus
ENSBTAG00000007606	HNRNPU	100	94.909	ENSCGRG00001020525	Hnrnpu	100	94.303	Cricetulus_griseus_chok1gshd
ENSBTAG00000007606	HNRNPU	80	67.213	ENSCSEG00000010804	hnrnpub	89	64.062	Cynoglossus_semilaevis
ENSBTAG00000007606	HNRNPU	79	71.429	ENSCVAG00000004280	hnrnpub	85	71.429	Cyprinodon_variegatus
ENSBTAG00000007606	HNRNPU	77	85.714	ENSDARG00000004735	hnrnpub	90	59.459	Danio_rerio
ENSBTAG00000007606	HNRNPU	78	62.319	ENSDARG00000015206	hnrnpua	89	62.319	Danio_rerio
ENSBTAG00000007606	HNRNPU	78	100.000	ENSDNOG00000000215	HNRNPU	88	100.000	Dasypus_novemcinctus
ENSBTAG00000007606	HNRNPU	100	90.303	ENSDORG00000015491	Hnrnpu	100	90.545	Dipodomys_ordii
ENSBTAG00000007606	HNRNPU	98	94.133	ENSETEG00000014565	HNRNPU	98	93.536	Echinops_telfairi
ENSBTAG00000007606	HNRNPU	98	98.859	ENSEASG00005003017	HNRNPU	98	98.859	Equus_asinus_asinus
ENSBTAG00000007606	HNRNPU	98	98.606	ENSECAG00000007955	HNRNPU	98	98.606	Equus_caballus
ENSBTAG00000007606	HNRNPU	89	55.844	ENSELUG00000011966	hnrnpua	67	72.727	Esox_lucius
ENSBTAG00000007606	HNRNPU	70	62.957	ENSELUG00000010733	hnrnpub	68	62.104	Esox_lucius
ENSBTAG00000007606	HNRNPU	99	98.879	ENSFCAG00000002156	HNRNPU	99	99.248	Felis_catus
ENSBTAG00000007606	HNRNPU	89	98.960	ENSFDAG00000006026	HNRNPU	100	98.990	Fukomys_damarensis
ENSBTAG00000007606	HNRNPU	80	69.643	ENSFHEG00000022639	hnrnpub	88	66.667	Fundulus_heteroclitus
ENSBTAG00000007606	HNRNPU	73	58.188	ENSGMOG00000001755	hnrnpub	77	59.477	Gadus_morhua
ENSBTAG00000007606	HNRNPU	100	78.471	ENSGALG00000010671	HNRNPU	99	78.597	Gallus_gallus
ENSBTAG00000007606	HNRNPU	79	78.261	ENSGAFG00000009369	hnrnpub	84	78.261	Gambusia_affinis
ENSBTAG00000007606	HNRNPU	74	60.539	ENSGACG00000004679	hnrnpub	73	57.692	Gasterosteus_aculeatus
ENSBTAG00000007606	HNRNPU	100	98.061	ENSGGOG00000004061	HNRNPU	100	98.061	Gorilla_gorilla
ENSBTAG00000007606	HNRNPU	78	83.333	ENSHBUG00000012290	hnrnpub	85	83.333	Haplochromis_burtoni
ENSBTAG00000007606	HNRNPU	100	96.502	ENSHGLG00000010594	-	100	96.502	Heterocephalus_glaber_female
ENSBTAG00000007606	HNRNPU	81	98.675	ENSHGLG00100015093	HNRNPU	100	98.675	Heterocephalus_glaber_male
ENSBTAG00000007606	HNRNPU	77	83.333	ENSHCOG00000020091	hnrnpub	83	79.545	Hippocampus_comes
ENSBTAG00000007606	HNRNPU	78	78.261	ENSIPUG00000007749	hnrnpu	92	72.549	Ictalurus_punctatus
ENSBTAG00000007606	HNRNPU	100	96.372	ENSJJAG00000011371	Hnrnpu	100	96.372	Jaculus_jaculus
ENSBTAG00000007606	HNRNPU	81	63.077	ENSKMAG00000004532	hnrnpub	88	59.155	Kryptolebias_marmoratus
ENSBTAG00000007606	HNRNPU	82	58.667	ENSLBEG00000022520	hnrnpub	87	61.194	Labrus_bergylta
ENSBTAG00000007606	HNRNPU	99	61.391	ENSLACG00000017463	HNRNPU	99	60.192	Latimeria_chalumnae
ENSBTAG00000007606	HNRNPU	74	67.685	ENSLOCG00000016652	hnrnpua	75	67.585	Lepisosteus_oculatus
ENSBTAG00000007606	HNRNPU	100	97.939	ENSLAFG00000021377	HNRNPU	100	97.939	Loxodonta_africana
ENSBTAG00000007606	HNRNPU	100	98.424	ENSMFAG00000037308	HNRNPU	100	98.424	Macaca_fascicularis
ENSBTAG00000007606	HNRNPU	98	98.352	ENSMMUG00000021098	HNRNPU	98	98.352	Macaca_mulatta
ENSBTAG00000007606	HNRNPU	100	98.424	ENSMNEG00000043645	HNRNPU	100	98.424	Macaca_nemestrina
ENSBTAG00000007606	HNRNPU	79	73.077	ENSMAMG00000007196	hnrnpub	86	73.077	Mastacembelus_armatus
ENSBTAG00000007606	HNRNPU	78	83.333	ENSMZEG00005003185	hnrnpub	85	83.333	Maylandia_zebra
ENSBTAG00000007606	HNRNPU	100	94.438	ENSMAUG00000008842	Hnrnpu	100	94.424	Mesocricetus_auratus
ENSBTAG00000007606	HNRNPU	100	98.545	ENSMICG00000004616	HNRNPU	100	98.545	Microcebus_murinus
ENSBTAG00000007606	HNRNPU	98	96.071	ENSMOCG00000015623	Hnrnpu	100	94.303	Microtus_ochrogaster
ENSBTAG00000007606	HNRNPU	100	90.706	ENSMODG00000006515	HNRNPU	100	92.824	Monodelphis_domestica
ENSBTAG00000007606	HNRNPU	79	70.588	ENSMALG00000018243	hnrnpub	79	63.139	Monopterus_albus
ENSBTAG00000007606	HNRNPU	98	96.456	MGP_CAROLIEiJ_G0014962	Hnrnpu	98	96.456	Mus_caroli
ENSBTAG00000007606	HNRNPU	99	96.617	ENSMUSG00000039630	Hnrnpu	99	96.617	Mus_musculus
ENSBTAG00000007606	HNRNPU	98	95.702	MGP_PahariEiJ_G0028193	Hnrnpu	98	95.702	Mus_pahari
ENSBTAG00000007606	HNRNPU	98	96.582	MGP_SPRETEiJ_G0015761	Hnrnpu	98	96.582	Mus_spretus
ENSBTAG00000007606	HNRNPU	100	87.711	ENSMLUG00000000475	HNRNPU	74	97.143	Myotis_lucifugus
ENSBTAG00000007606	HNRNPU	98	96.831	ENSNGAG00000019075	Hnrnpu	98	96.831	Nannospalax_galili
ENSBTAG00000007606	HNRNPU	78	83.333	ENSNBRG00000017855	hnrnpub	85	83.333	Neolamprologus_brichardi
ENSBTAG00000007606	HNRNPU	99	87.923	ENSMEUG00000000541	HNRNPU	100	90.097	Notamacropus_eugenii
ENSBTAG00000007606	HNRNPU	70	97.087	ENSODEG00000014458	-	100	97.087	Octodon_degus
ENSBTAG00000007606	HNRNPU	78	83.333	ENSONIG00000001260	hnrnpub	88	83.333	Oreochromis_niloticus
ENSBTAG00000007606	HNRNPU	98	99.134	ENSOCUG00000014469	HNRNPU	93	99.134	Oryctolagus_cuniculus
ENSBTAG00000007606	HNRNPU	79	78.261	ENSORLG00000016114	hnrnpub	78	55.063	Oryzias_latipes
ENSBTAG00000007606	HNRNPU	79	78.261	ENSORLG00020005363	hnrnpub	86	83.333	Oryzias_latipes_hni
ENSBTAG00000007606	HNRNPU	79	78.261	ENSORLG00015001190	hnrnpub	86	83.333	Oryzias_latipes_hsok
ENSBTAG00000007606	HNRNPU	79	78.261	ENSOMEG00000014951	hnrnpub	86	83.333	Oryzias_melastigma
ENSBTAG00000007606	HNRNPU	98	98.352	ENSOGAG00000014024	HNRNPU	98	98.352	Otolemur_garnettii
ENSBTAG00000007606	HNRNPU	80	100.000	ENSOARG00000004985	HNRNPU	91	99.664	Ovis_aries
ENSBTAG00000007606	HNRNPU	100	98.545	ENSPPAG00000038652	HNRNPU	100	98.545	Pan_paniscus
ENSBTAG00000007606	HNRNPU	100	98.788	ENSPPRG00000002662	HNRNPU	100	98.788	Panthera_pardus
ENSBTAG00000007606	HNRNPU	100	98.545	ENSPTRG00000002182	HNRNPU	100	98.545	Pan_troglodytes
ENSBTAG00000007606	HNRNPU	99	98.379	ENSPANG00000011643	HNRNPU	99	99.060	Papio_anubis
ENSBTAG00000007606	HNRNPU	84	66.456	ENSPKIG00000022332	hnrnpub	85	71.698	Paramormyrops_kingsleyae
ENSBTAG00000007606	HNRNPU	78	80.851	ENSPKIG00000006885	hnrnpua	78	66.560	Paramormyrops_kingsleyae
ENSBTAG00000007606	HNRNPU	100	94.033	ENSPCIG00000008657	HNRNPU	100	94.391	Phascolarctos_cinereus
ENSBTAG00000007606	HNRNPU	81	64.062	ENSPFOG00000002908	hnrnpub	89	60.811	Poecilia_formosa
ENSBTAG00000007606	HNRNPU	81	64.062	ENSPLAG00000004160	hnrnpub	89	60.811	Poecilia_latipinna
ENSBTAG00000007606	HNRNPU	99	93.233	ENSPCOG00000003883	-	99	93.233	Propithecus_coquereli
ENSBTAG00000007606	HNRNPU	100	98.667	ENSPCOG00000018655	-	100	98.667	Propithecus_coquereli
ENSBTAG00000007606	HNRNPU	100	98.788	ENSPVAG00000002581	HNRNPU	100	98.788	Pteropus_vampyrus
ENSBTAG00000007606	HNRNPU	78	83.333	ENSPNYG00000021642	hnrnpub	85	83.333	Pundamilia_nyererei
ENSBTAG00000007606	HNRNPU	98	55.847	ENSPNAG00000001055	hnrnpub	79	64.196	Pygocentrus_nattereri
ENSBTAG00000007606	HNRNPU	99	95.766	ENSRNOG00000033790	Hnrnpu	99	95.766	Rattus_norvegicus
ENSBTAG00000007606	HNRNPU	98	96.705	ENSRBIG00000031519	HNRNPU	98	96.705	Rhinopithecus_bieti
ENSBTAG00000007606	HNRNPU	98	98.099	ENSRROG00000041642	HNRNPU	98	98.099	Rhinopithecus_roxellana
ENSBTAG00000007606	HNRNPU	94	59.539	ENSSFOG00015019004	hnrnpu	77	67.468	Scleropages_formosus
ENSBTAG00000007606	HNRNPU	98	57.041	ENSSFOG00015001124	hnrnpub	86	63.889	Scleropages_formosus
ENSBTAG00000007606	HNRNPU	73	70.588	ENSSMAG00000003607	hnrnpub	83	70.588	Scophthalmus_maximus
ENSBTAG00000007606	HNRNPU	89	55.007	ENSSDUG00000005912	hnrnpub	85	70.588	Seriola_dumerili
ENSBTAG00000007606	HNRNPU	79	70.588	ENSSLDG00000004899	hnrnpub	85	70.588	Seriola_lalandi_dorsalis
ENSBTAG00000007606	HNRNPU	100	79.122	ENSSPUG00000011393	HNRNPU	100	79.167	Sphenodon_punctatus
ENSBTAG00000007606	HNRNPU	73	78.261	ENSSPAG00000011853	hnrnpub	80	58.514	Stegastes_partitus
ENSBTAG00000007606	HNRNPU	100	99.273	ENSSSCG00000010877	HNRNPU	100	99.273	Sus_scrofa
ENSBTAG00000007606	HNRNPU	84	57.738	ENSTRUG00000007759	hnrnpub	85	64.706	Takifugu_rubripes
ENSBTAG00000007606	HNRNPU	85	56.109	ENSTNIG00000009725	hnrnpub	90	68.085	Tetraodon_nigroviridis
ENSBTAG00000007606	HNRNPU	71	100.000	ENSTTRG00000005281	HNRNPU	71	100.000	Tursiops_truncatus
ENSBTAG00000007606	HNRNPU	100	99.030	ENSUAMG00000021120	HNRNPU	100	99.030	Ursus_americanus
ENSBTAG00000007606	HNRNPU	87	98.000	ENSUMAG00000012322	HNRNPU	98	95.495	Ursus_maritimus
ENSBTAG00000007606	HNRNPU	78	99.099	ENSVPAG00000010520	HNRNPU	91	99.099	Vicugna_pacos
ENSBTAG00000007606	HNRNPU	99	98.755	ENSVVUG00000026524	HNRNPU	99	98.755	Vulpes_vulpes
ENSBTAG00000007606	HNRNPU	99	66.548	ENSXETG00000011386	hnrnpu	99	68.214	Xenopus_tropicalis
ENSBTAG00000007606	HNRNPU	99	46.504	ENSXMAG00000010356	hnrnpub	86	78.261	Xiphophorus_maculatus