EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000007702 (Gene tree)
Gene ID: 511723
Gene Symbol: RPP38
Alias: -
Full Name: Bos taurus ribonuclease P/MRP subunit p38 (RPP38)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 5881 bases
Position: chr13:29674380-29680260
Accession: NM_001038085
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000010127	Ribosomal_L7Ae	PF01248.26	4.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000010127	-	1193	-	ENSBTAP00000010127	282 (aa)	XP_005214241	G5E591

Gene Model

Click here to download ENSBTAG00000007702's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03008	Ribosome biogenesis in eukaryotes	KEGG
bta03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000007702's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000007702	RPP38	100	73.498	ENSG00000152464	RPP38	100	73.498	Homo_sapiens
ENSBTAG00000007702	RPP38	94	42.652	ENSAPOG00000001240	rpp38	96	41.786	Acanthochromis_polyacanthus
ENSBTAG00000007702	RPP38	100	77.305	ENSAMEG00000018832	RPP38	100	76.241	Ailuropoda_melanoleuca
ENSBTAG00000007702	RPP38	88	41.732	ENSACIG00000011592	rpp38	97	40.074	Amphilophus_citrinellus
ENSBTAG00000007702	RPP38	92	41.812	ENSAOCG00000017293	rpp38	96	41.463	Amphiprion_ocellaris
ENSBTAG00000007702	RPP38	94	42.754	ENSAPEG00000002315	rpp38	96	42.391	Amphiprion_percula
ENSBTAG00000007702	RPP38	96	44.755	ENSATEG00000000731	rpp38	98	44.484	Anabas_testudineus
ENSBTAG00000007702	RPP38	91	47.170	ENSAPLG00000002054	RPP38	97	48.029	Anas_platyrhynchos
ENSBTAG00000007702	RPP38	74	47.418	ENSACLG00000016962	rpp38	99	42.143	Astatotilapia_calliptera
ENSBTAG00000007702	RPP38	74	47.945	ENSACLG00000016958	rpp38	99	41.438	Astatotilapia_calliptera
ENSBTAG00000007702	RPP38	89	43.462	ENSAMXG00000025023	rpp38	98	44.043	Astyanax_mexicanus
ENSBTAG00000007702	RPP38	100	75.532	ENSCAFG00000024373	RPP38	100	74.468	Canis_familiaris
ENSBTAG00000007702	RPP38	100	75.532	ENSCAFG00020008008	RPP38	100	74.468	Canis_lupus_dingo
ENSBTAG00000007702	RPP38	100	96.809	ENSCHIG00000012484	RPP38	100	96.809	Capra_hircus
ENSBTAG00000007702	RPP38	100	70.070	ENSCPOG00000003981	RPP38	100	70.070	Cavia_porcellus
ENSBTAG00000007702	RPP38	100	70.775	ENSCLAG00000010194	RPP38	100	70.775	Chinchilla_lanigera
ENSBTAG00000007702	RPP38	94	75.472	ENSCSAG00000019055	RPP38	100	75.265	Chlorocebus_sabaeus
ENSBTAG00000007702	RPP38	100	74.648	ENSCHOG00000004335	RPP38	100	74.648	Choloepus_hoffmanni
ENSBTAG00000007702	RPP38	100	66.667	ENSCGRG00001001395	Rpp38	100	66.667	Cricetulus_griseus_chok1gshd
ENSBTAG00000007702	RPP38	100	66.667	ENSCGRG00000017441	Rpp38	100	66.667	Cricetulus_griseus_crigri
ENSBTAG00000007702	RPP38	94	41.516	ENSCSEG00000001721	rpp38	98	42.049	Cynoglossus_semilaevis
ENSBTAG00000007702	RPP38	95	41.993	ENSCVAG00000001676	rpp38	97	42.657	Cyprinodon_variegatus
ENSBTAG00000007702	RPP38	94	45.161	ENSDARG00000040350	rpp38	96	43.885	Danio_rerio
ENSBTAG00000007702	RPP38	100	72.792	ENSDNOG00000040314	RPP38	100	72.792	Dasypus_novemcinctus
ENSBTAG00000007702	RPP38	100	65.141	ENSDORG00000009783	Rpp38	100	65.141	Dipodomys_ordii
ENSBTAG00000007702	RPP38	100	69.014	ENSETEG00000002839	RPP38	100	69.014	Echinops_telfairi
ENSBTAG00000007702	RPP38	99	78.058	ENSEASG00005019783	RPP38	98	78.058	Equus_asinus_asinus
ENSBTAG00000007702	RPP38	100	72.695	ENSEEUG00000014677	RPP38	100	72.695	Erinaceus_europaeus
ENSBTAG00000007702	RPP38	89	47.273	ENSELUG00000010160	rpp38	96	46.713	Esox_lucius
ENSBTAG00000007702	RPP38	100	74.468	ENSFCAG00000022449	RPP38	100	73.759	Felis_catus
ENSBTAG00000007702	RPP38	91	51.894	ENSFALG00000014804	RPP38	95	50.719	Ficedula_albicollis
ENSBTAG00000007702	RPP38	100	71.831	ENSFDAG00000018669	RPP38	100	71.831	Fukomys_damarensis
ENSBTAG00000007702	RPP38	95	40.780	ENSFHEG00000013741	rpp38	99	40.678	Fundulus_heteroclitus
ENSBTAG00000007702	RPP38	92	50.379	ENSGALG00000008794	RPP38	93	49.275	Gallus_gallus
ENSBTAG00000007702	RPP38	58	48.235	ENSGACG00000009258	rpp38	97	47.561	Gasterosteus_aculeatus
ENSBTAG00000007702	RPP38	74	47.032	ENSHBUG00000010937	rpp38	97	40.559	Haplochromis_burtoni
ENSBTAG00000007702	RPP38	100	70.070	ENSHGLG00000012144	RPP38	100	70.070	Heterocephalus_glaber_female
ENSBTAG00000007702	RPP38	89	42.063	ENSIPUG00000022879	rpp38	95	42.379	Ictalurus_punctatus
ENSBTAG00000007702	RPP38	100	70.671	ENSSTOG00000025699	RPP38	98	70.671	Ictidomys_tridecemlineatus
ENSBTAG00000007702	RPP38	100	69.474	ENSJJAG00000007523	Rpp38	100	68.772	Jaculus_jaculus
ENSBTAG00000007702	RPP38	88	41.241	ENSKMAG00000003986	rpp38	89	42.424	Kryptolebias_marmoratus
ENSBTAG00000007702	RPP38	92	42.264	ENSLBEG00000006853	rpp38	94	42.803	Labrus_bergylta
ENSBTAG00000007702	RPP38	95	50.519	ENSLACG00000006502	RPP38	100	49.835	Latimeria_chalumnae
ENSBTAG00000007702	RPP38	94	46.377	ENSLOCG00000018347	rpp38	94	48.327	Lepisosteus_oculatus
ENSBTAG00000007702	RPP38	100	74.648	ENSLAFG00000000509	RPP38	100	73.592	Loxodonta_africana
ENSBTAG00000007702	RPP38	94	74.340	ENSMMUG00000007679	RPP38	100	74.205	Macaca_mulatta
ENSBTAG00000007702	RPP38	96	43.060	ENSMAMG00000012774	rpp38	96	43.116	Mastacembelus_armatus
ENSBTAG00000007702	RPP38	74	47.945	ENSMZEG00005003200	rpp38	99	41.438	Maylandia_zebra
ENSBTAG00000007702	RPP38	74	47.945	ENSMZEG00005003189	rpp38	97	41.259	Maylandia_zebra
ENSBTAG00000007702	RPP38	92	50.758	ENSMGAG00000008217	RPP38	93	49.638	Meleagris_gallopavo
ENSBTAG00000007702	RPP38	100	67.719	ENSMAUG00000003644	Rpp38	100	67.719	Mesocricetus_auratus
ENSBTAG00000007702	RPP38	100	69.123	ENSMOCG00000007020	Rpp38	100	68.421	Microtus_ochrogaster
ENSBTAG00000007702	RPP38	93	39.362	ENSMMOG00000003446	rpp38	94	39.927	Mola_mola
ENSBTAG00000007702	RPP38	95	63.838	ENSMODG00000024091	RPP38	100	63.158	Monodelphis_domestica
ENSBTAG00000007702	RPP38	91	38.909	ENSMALG00000002356	rpp38	93	39.259	Monopterus_albus
ENSBTAG00000007702	RPP38	100	68.772	MGP_CAROLIEiJ_G0023133	Rpp38	100	68.772	Mus_caroli
ENSBTAG00000007702	RPP38	100	68.421	ENSMUSG00000049950	Rpp38	100	68.421	Mus_musculus
ENSBTAG00000007702	RPP38	100	69.825	MGP_PahariEiJ_G0019193	Rpp38	100	69.825	Mus_pahari
ENSBTAG00000007702	RPP38	100	68.421	MGP_SPRETEiJ_G0024051	Rpp38	100	68.421	Mus_spretus
ENSBTAG00000007702	RPP38	99	75.357	ENSMPUG00000018523	RPP38	99	74.286	Mustela_putorius_furo
ENSBTAG00000007702	RPP38	94	76.136	ENSMLUG00000002153	RPP38	100	75.532	Myotis_lucifugus
ENSBTAG00000007702	RPP38	100	70.526	ENSNGAG00000011066	Rpp38	100	70.526	Nannospalax_galili
ENSBTAG00000007702	RPP38	73	47.222	ENSNBRG00000006994	rpp38	97	41.429	Neolamprologus_brichardi
ENSBTAG00000007702	RPP38	95	42.652	ENSONIG00000020467	rpp38	97	42.857	Oreochromis_niloticus
ENSBTAG00000007702	RPP38	94	70.301	ENSOCUG00000024367	-	100	70.070	Oryctolagus_cuniculus
ENSBTAG00000007702	RPP38	94	69.925	ENSOCUG00000022768	-	100	69.718	Oryctolagus_cuniculus
ENSBTAG00000007702	RPP38	90	45.556	ENSORLG00000009219	rpp38	96	42.804	Oryzias_latipes
ENSBTAG00000007702	RPP38	88	45.247	ENSORLG00020011503	rpp38	89	43.478	Oryzias_latipes_hni
ENSBTAG00000007702	RPP38	88	45.174	ENSORLG00015017702	rpp38	93	42.807	Oryzias_latipes_hsok
ENSBTAG00000007702	RPP38	88	45.802	ENSOMEG00000005414	rpp38	96	44.326	Oryzias_melastigma
ENSBTAG00000007702	RPP38	100	73.498	ENSOGAG00000008059	RPP38	100	73.498	Otolemur_garnettii
ENSBTAG00000007702	RPP38	100	96.809	ENSOARG00000004534	RPP38	100	96.809	Ovis_aries
ENSBTAG00000007702	RPP38	100	73.498	ENSPPAG00000041577	RPP38	91	73.498	Pan_paniscus
ENSBTAG00000007702	RPP38	100	75.177	ENSPPRG00000015329	RPP38	100	74.468	Panthera_pardus
ENSBTAG00000007702	RPP38	100	74.113	ENSPTIG00000007188	RPP38	100	73.404	Panthera_tigris_altaica
ENSBTAG00000007702	RPP38	100	73.145	ENSPTRG00000002318	RPP38	91	73.145	Pan_troglodytes
ENSBTAG00000007702	RPP38	93	47.273	ENSPKIG00000025652	rpp38	94	45.788	Paramormyrops_kingsleyae
ENSBTAG00000007702	RPP38	97	52.330	ENSPSIG00000001527	RPP38	98	52.482	Pelodiscus_sinensis
ENSBTAG00000007702	RPP38	100	71.579	ENSPEMG00000008375	Rpp38	100	71.579	Peromyscus_maniculatus_bairdii
ENSBTAG00000007702	RPP38	100	64.561	ENSPCIG00000009096	RPP38	94	62.807	Phascolarctos_cinereus
ENSBTAG00000007702	RPP38	61	45.355	ENSPFOG00000016823	rpp38	82	45.355	Poecilia_formosa
ENSBTAG00000007702	RPP38	89	41.264	ENSPLAG00000007626	rpp38	91	41.288	Poecilia_latipinna
ENSBTAG00000007702	RPP38	87	38.521	ENSPMEG00000020392	rpp38	90	39.924	Poecilia_mexicana
ENSBTAG00000007702	RPP38	96	40.345	ENSPREG00000017744	rpp38	97	40.351	Poecilia_reticulata
ENSBTAG00000007702	RPP38	100	74.205	ENSPPYG00000002113	RPP38	100	74.205	Pongo_abelii
ENSBTAG00000007702	RPP38	94	75.758	ENSPVAG00000007155	RPP38	100	76.241	Pteropus_vampyrus
ENSBTAG00000007702	RPP38	74	47.945	ENSPNYG00000004293	rpp38	97	41.259	Pundamilia_nyererei
ENSBTAG00000007702	RPP38	89	43.137	ENSPNAG00000010633	rpp38	99	44.203	Pygocentrus_nattereri
ENSBTAG00000007702	RPP38	98	67.742	ENSRNOG00000038025	Rpp38	99	66.667	Rattus_norvegicus
ENSBTAG00000007702	RPP38	100	63.509	ENSSHAG00000015529	RPP38	100	63.158	Sarcophilus_harrisii
ENSBTAG00000007702	RPP38	94	44.364	ENSSMAG00000018276	rpp38	95	44.000	Scophthalmus_maximus
ENSBTAG00000007702	RPP38	94	41.516	ENSSDUG00000001651	rpp38	98	42.349	Seriola_dumerili
ENSBTAG00000007702	RPP38	94	42.238	ENSSLDG00000014355	rpp38	98	42.908	Seriola_lalandi_dorsalis
ENSBTAG00000007702	RPP38	100	56.383	ENSSARG00000012099	RPP38	100	56.383	Sorex_araneus
ENSBTAG00000007702	RPP38	96	50.000	ENSSPUG00000008560	-	97	48.921	Sphenodon_punctatus
ENSBTAG00000007702	RPP38	100	54.167	ENSSPUG00000005237	-	100	52.414	Sphenodon_punctatus
ENSBTAG00000007702	RPP38	99	53.846	ENSSPUG00000018363	-	99	52.083	Sphenodon_punctatus
ENSBTAG00000007702	RPP38	94	41.606	ENSSPAG00000020387	rpp38	98	40.702	Stegastes_partitus
ENSBTAG00000007702	RPP38	100	78.246	ENSSSCG00000027110	RPP38	100	78.246	Sus_scrofa
ENSBTAG00000007702	RPP38	91	50.570	ENSTGUG00000001366	RPP38	98	50.542	Taeniopygia_guttata
ENSBTAG00000007702	RPP38	94	43.431	ENSTNIG00000001334	rpp38	96	43.431	Tetraodon_nigroviridis
ENSBTAG00000007702	RPP38	100	85.461	ENSTTRG00000004420	RPP38	100	85.461	Tursiops_truncatus
ENSBTAG00000007702	RPP38	100	76.950	ENSUAMG00000002618	RPP38	100	75.887	Ursus_americanus
ENSBTAG00000007702	RPP38	100	75.265	ENSUMAG00000012382	RPP38	100	75.972	Ursus_maritimus
ENSBTAG00000007702	RPP38	100	75.177	ENSVVUG00000005272	RPP38	100	74.113	Vulpes_vulpes
ENSBTAG00000007702	RPP38	92	47.955	ENSXETG00000003419	rpp38	97	48.561	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004526	ribonuclease P activity	-	IEA	Function
GO:0005730	nucleolus	-	IEA	Component
GO:0008033	tRNA processing	-	IEA	Process
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	-	IEA	Process