EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000007875 (Gene tree)
Gene ID: 539785
Gene Symbol: SAFB
Alias: -
Full Name: Bos taurus scaffold attachment factor B (SAFB)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 29779 bases
Position: chr7:18621612-18651390
Accession: NM_001099715
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000002344	RRM_5	PF13893.6	1e-06	1	1
ENSBTAP00000002344	RRM_1	PF00076.22	4.2e-13	1	1
ENSBTAP00000002344	SAP	PF02037.27	8.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000002344	-	3046	XM_024994511	ENSBTAP00000002344	903 (aa)	XP_024850279	A5PJP2

Gene Model

Click here to download ENSBTAG00000007875's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000007875's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000007875	SAFB	100	63.295	ENSBTAG00000001790	SAFB2	98	68.319

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000007875	SAFB	100	88.877	ENSG00000160633	SAFB	100	88.877	Homo_sapiens
ENSBTAG00000007875	SAFB	91	43.858	ENSAPOG00000022508	safb	95	44.131	Acanthochromis_polyacanthus
ENSBTAG00000007875	SAFB	100	89.891	ENSAMEG00000012254	SAFB	98	90.737	Ailuropoda_melanoleuca
ENSBTAG00000007875	SAFB	95	39.359	ENSACIG00000006247	safb	99	40.045	Amphilophus_citrinellus
ENSBTAG00000007875	SAFB	93	43.001	ENSAOCG00000006308	safb	98	43.721	Amphiprion_ocellaris
ENSBTAG00000007875	SAFB	91	43.463	ENSAPEG00000023342	safb	95	43.581	Amphiprion_percula
ENSBTAG00000007875	SAFB	95	42.325	ENSATEG00000004998	safb	95	43.991	Anabas_testudineus
ENSBTAG00000007875	SAFB	93	63.731	ENSAPLG00000005780	-	100	63.615	Anas_platyrhynchos
ENSBTAG00000007875	SAFB	60	62.182	ENSAPLG00000006355	-	99	63.820	Anas_platyrhynchos
ENSBTAG00000007875	SAFB	78	50.476	ENSACAG00000016893	-	95	51.200	Anolis_carolinensis
ENSBTAG00000007875	SAFB	100	89.204	ENSANAG00000028821	SAFB	100	89.204	Aotus_nancymaae
ENSBTAG00000007875	SAFB	94	41.453	ENSACLG00000001926	safb	95	44.054	Astatotilapia_calliptera
ENSBTAG00000007875	SAFB	95	43.192	ENSAMXG00000018154	safb	98	43.668	Astyanax_mexicanus
ENSBTAG00000007875	SAFB	83	94.811	ENSCJAG00000017081	SAFB	100	94.811	Callithrix_jacchus
ENSBTAG00000007875	SAFB	100	91.285	ENSCAFG00000018803	SAFB	87	91.285	Canis_familiaris
ENSBTAG00000007875	SAFB	100	91.285	ENSCAFG00020018943	SAFB	100	91.285	Canis_lupus_dingo
ENSBTAG00000007875	SAFB	100	98.228	ENSCHIG00000007262	SAFB	100	98.228	Capra_hircus
ENSBTAG00000007875	SAFB	58	74.388	ENSTSYG00000001851	-	100	74.200	Carlito_syrichta
ENSBTAG00000007875	SAFB	100	83.953	ENSCPOG00000026322	SAFB	100	83.953	Cavia_porcellus
ENSBTAG00000007875	SAFB	100	89.107	ENSCCAG00000020193	SAFB	100	89.107	Cebus_capucinus
ENSBTAG00000007875	SAFB	100	89.204	ENSCATG00000029994	SAFB	100	89.204	Cercocebus_atys
ENSBTAG00000007875	SAFB	100	83.885	ENSCLAG00000007734	SAFB	100	85.592	Chinchilla_lanigera
ENSBTAG00000007875	SAFB	100	89.095	ENSCSAG00000009949	SAFB	100	89.095	Chlorocebus_sabaeus
ENSBTAG00000007875	SAFB	87	81.117	ENSCHOG00000003208	SAFB	93	81.217	Choloepus_hoffmanni
ENSBTAG00000007875	SAFB	91	63.452	ENSCPBG00000010928	-	99	63.550	Chrysemys_picta_bellii
ENSBTAG00000007875	SAFB	91	60.452	ENSCPBG00000010936	-	99	60.791	Chrysemys_picta_bellii
ENSBTAG00000007875	SAFB	96	86.078	ENSCANG00000004774	-	100	90.982	Colobus_angolensis_palliatus
ENSBTAG00000007875	SAFB	100	83.097	ENSCANG00000019754	-	100	83.097	Colobus_angolensis_palliatus
ENSBTAG00000007875	SAFB	100	80.298	ENSCGRG00001002254	Safb	100	80.298	Cricetulus_griseus_chok1gshd
ENSBTAG00000007875	SAFB	90	77.663	ENSCGRG00000011529	Safb	96	77.663	Cricetulus_griseus_crigri
ENSBTAG00000007875	SAFB	95	40.698	ENSCSEG00000019870	safb	98	39.794	Cynoglossus_semilaevis
ENSBTAG00000007875	SAFB	95	39.614	ENSCVAG00000002226	safb	63	45.855	Cyprinodon_variegatus
ENSBTAG00000007875	SAFB	91	41.850	ENSDARG00000020467	safb	99	44.184	Danio_rerio
ENSBTAG00000007875	SAFB	100	88.466	ENSDNOG00000015746	SAFB	95	90.046	Dasypus_novemcinctus
ENSBTAG00000007875	SAFB	100	79.533	ENSDORG00000016200	Safb	100	80.446	Dipodomys_ordii
ENSBTAG00000007875	SAFB	79	72.344	ENSETEG00000018679	SAFB	76	85.043	Echinops_telfairi
ENSBTAG00000007875	SAFB	100	85.792	ENSEASG00005023019	SAFB	100	84.490	Equus_asinus_asinus
ENSBTAG00000007875	SAFB	100	87.786	ENSECAG00000018659	SAFB	89	87.895	Equus_caballus
ENSBTAG00000007875	SAFB	95	42.035	ENSELUG00000022327	safb	98	44.737	Esox_lucius
ENSBTAG00000007875	SAFB	100	90.850	ENSFCAG00000011835	SAFB	100	90.850	Felis_catus
ENSBTAG00000007875	SAFB	58	59.358	ENSFALG00000013881	-	99	61.155	Ficedula_albicollis
ENSBTAG00000007875	SAFB	100	63.784	ENSFALG00000013882	-	89	64.397	Ficedula_albicollis
ENSBTAG00000007875	SAFB	96	81.487	ENSFDAG00000020306	SAFB	100	85.915	Fukomys_damarensis
ENSBTAG00000007875	SAFB	56	47.348	ENSGMOG00000014280	safb	98	40.773	Gadus_morhua
ENSBTAG00000007875	SAFB	100	63.961	ENSGALG00000013365	-	97	64.581	Gallus_gallus
ENSBTAG00000007875	SAFB	95	37.541	ENSGAFG00000016162	safb	98	40.785	Gambusia_affinis
ENSBTAG00000007875	SAFB	95	42.018	ENSGACG00000011385	safb	95	41.889	Gasterosteus_aculeatus
ENSBTAG00000007875	SAFB	96	62.069	ENSGAGG00000008424	-	97	62.736	Gopherus_agassizii
ENSBTAG00000007875	SAFB	72	57.399	ENSGAGG00000017702	-	100	57.589	Gopherus_agassizii
ENSBTAG00000007875	SAFB	100	88.659	ENSGGOG00000015109	SAFB	100	88.659	Gorilla_gorilla
ENSBTAG00000007875	SAFB	95	39.216	ENSHBUG00000009218	safb	97	40.774	Haplochromis_burtoni
ENSBTAG00000007875	SAFB	100	85.760	ENSHGLG00000015883	SAFB	100	85.760	Heterocephalus_glaber_female
ENSBTAG00000007875	SAFB	93	38.838	ENSHCOG00000001705	safb	99	39.016	Hippocampus_comes
ENSBTAG00000007875	SAFB	57	49.251	ENSIPUG00000024869	safb2	98	45.879	Ictalurus_punctatus
ENSBTAG00000007875	SAFB	93	86.552	ENSSTOG00000002783	SAFB	100	86.552	Ictidomys_tridecemlineatus
ENSBTAG00000007875	SAFB	100	81.296	ENSJJAG00000009021	Safb	98	82.225	Jaculus_jaculus
ENSBTAG00000007875	SAFB	91	42.874	ENSKMAG00000022308	safb	95	42.472	Kryptolebias_marmoratus
ENSBTAG00000007875	SAFB	95	41.722	ENSLBEG00000006015	safb	95	44.333	Labrus_bergylta
ENSBTAG00000007875	SAFB	65	51.954	ENSLACG00000018090	SAFB	100	53.109	Latimeria_chalumnae
ENSBTAG00000007875	SAFB	96	46.468	ENSLOCG00000003613	safb	99	48.064	Lepisosteus_oculatus
ENSBTAG00000007875	SAFB	98	87.251	ENSLAFG00000003840	SAFB	98	87.403	Loxodonta_africana
ENSBTAG00000007875	SAFB	100	89.107	ENSMFAG00000003885	SAFB	100	89.107	Macaca_fascicularis
ENSBTAG00000007875	SAFB	100	89.204	ENSMMUG00000017970	SAFB	100	89.204	Macaca_mulatta
ENSBTAG00000007875	SAFB	100	85.730	ENSMNEG00000035637	SAFB	100	85.730	Macaca_nemestrina
ENSBTAG00000007875	SAFB	100	83.713	ENSMLEG00000038637	SAFB	100	83.713	Mandrillus_leucophaeus
ENSBTAG00000007875	SAFB	97	42.208	ENSMAMG00000003357	safb	89	43.601	Mastacembelus_armatus
ENSBTAG00000007875	SAFB	94	41.648	ENSMZEG00005009120	safb	95	44.209	Maylandia_zebra
ENSBTAG00000007875	SAFB	97	62.332	ENSMGAG00000001101	-	100	62.444	Meleagris_gallopavo
ENSBTAG00000007875	SAFB	90	58.724	ENSMGAG00000001051	-	100	61.011	Meleagris_gallopavo
ENSBTAG00000007875	SAFB	52	84.805	ENSMAUG00000005013	Safb	100	84.805	Mesocricetus_auratus
ENSBTAG00000007875	SAFB	86	76.312	ENSMICG00000046795	-	98	88.298	Microcebus_murinus
ENSBTAG00000007875	SAFB	100	85.963	ENSMICG00000008739	-	100	86.942	Microcebus_murinus
ENSBTAG00000007875	SAFB	100	80.511	ENSMOCG00000014040	Safb	100	80.511	Microtus_ochrogaster
ENSBTAG00000007875	SAFB	100	72.476	ENSMODG00000001236	SAFB	98	72.628	Monodelphis_domestica
ENSBTAG00000007875	SAFB	93	41.986	ENSMALG00000020330	safb	98	44.432	Monopterus_albus
ENSBTAG00000007875	SAFB	100	80.213	MGP_CAROLIEiJ_G0021780	Safb	100	80.213	Mus_caroli
ENSBTAG00000007875	SAFB	100	80.213	ENSMUSG00000071054	Safb	100	80.213	Mus_musculus
ENSBTAG00000007875	SAFB	100	80.128	MGP_PahariEiJ_G0020769	Safb	100	80.128	Mus_pahari
ENSBTAG00000007875	SAFB	100	90.087	ENSMPUG00000006123	SAFB	94	90.087	Mustela_putorius_furo
ENSBTAG00000007875	SAFB	100	89.651	ENSMLUG00000001081	SAFB	100	89.651	Myotis_lucifugus
ENSBTAG00000007875	SAFB	100	79.296	ENSNGAG00000019882	Safb	100	78.975	Nannospalax_galili
ENSBTAG00000007875	SAFB	97	89.989	ENSNLEG00000013551	SAFB	100	89.989	Nomascus_leucogenys
ENSBTAG00000007875	SAFB	89	80.958	ENSOPRG00000011561	-	100	82.432	Ochotona_princeps
ENSBTAG00000007875	SAFB	100	86.019	ENSODEG00000014838	SAFB	100	86.019	Octodon_degus
ENSBTAG00000007875	SAFB	94	41.482	ENSONIG00000002318	safb	95	43.946	Oreochromis_niloticus
ENSBTAG00000007875	SAFB	90	78.245	ENSOCUG00000014628	SAFB	100	76.914	Oryctolagus_cuniculus
ENSBTAG00000007875	SAFB	91	42.991	ENSORLG00000016989	safb	98	42.454	Oryzias_latipes
ENSBTAG00000007875	SAFB	95	41.040	ENSORLG00020000404	safb	98	39.043	Oryzias_latipes_hni
ENSBTAG00000007875	SAFB	95	42.506	ENSORLG00015010733	safb	98	42.484	Oryzias_latipes_hsok
ENSBTAG00000007875	SAFB	94	39.474	ENSOMEG00000009066	safb	59	48.763	Oryzias_melastigma
ENSBTAG00000007875	SAFB	100	85.512	ENSOGAG00000027769	SAFB	100	86.819	Otolemur_garnettii
ENSBTAG00000007875	SAFB	100	95.243	ENSOARG00000007662	-	100	95.243	Ovis_aries
ENSBTAG00000007875	SAFB	79	89.076	ENSOARG00000007856	-	100	88.687	Ovis_aries
ENSBTAG00000007875	SAFB	100	88.671	ENSPPAG00000035129	SAFB	100	88.671	Pan_paniscus
ENSBTAG00000007875	SAFB	100	90.850	ENSPPRG00000017197	SAFB	100	90.850	Panthera_pardus
ENSBTAG00000007875	SAFB	100	88.671	ENSPTRG00000010335	SAFB	100	88.671	Pan_troglodytes
ENSBTAG00000007875	SAFB	100	88.998	ENSPANG00000007770	SAFB	100	88.998	Papio_anubis
ENSBTAG00000007875	SAFB	90	42.857	ENSPKIG00000009902	safb	98	44.444	Paramormyrops_kingsleyae
ENSBTAG00000007875	SAFB	99	60.952	ENSPSIG00000009367	-	97	61.848	Pelodiscus_sinensis
ENSBTAG00000007875	SAFB	100	60.947	ENSPSIG00000011679	-	100	62.683	Pelodiscus_sinensis
ENSBTAG00000007875	SAFB	100	81.537	ENSPEMG00000020428	Safb	100	81.537	Peromyscus_maniculatus_bairdii
ENSBTAG00000007875	SAFB	58	75.461	ENSPCIG00000009504	-	99	77.355	Phascolarctos_cinereus
ENSBTAG00000007875	SAFB	95	38.958	ENSPFOG00000007745	safb	99	42.706	Poecilia_formosa
ENSBTAG00000007875	SAFB	95	37.955	ENSPLAG00000001614	safb	98	40.680	Poecilia_latipinna
ENSBTAG00000007875	SAFB	95	38.618	ENSPMEG00000021023	safb	98	41.705	Poecilia_mexicana
ENSBTAG00000007875	SAFB	100	88.877	ENSPPYG00000009428	SAFB	100	88.877	Pongo_abelii
ENSBTAG00000007875	SAFB	100	81.473	ENSPCAG00000006475	SAFB	100	82.124	Procavia_capensis
ENSBTAG00000007875	SAFB	100	82.538	ENSPCOG00000014090	SAFB	100	80.628	Propithecus_coquereli
ENSBTAG00000007875	SAFB	100	82.155	ENSPVAG00000004913	SAFB	100	82.590	Pteropus_vampyrus
ENSBTAG00000007875	SAFB	95	43.694	ENSPNAG00000021838	safb	97	45.768	Pygocentrus_nattereri
ENSBTAG00000007875	SAFB	100	79.639	ENSRNOG00000050543	Safb	100	80.276	Rattus_norvegicus
ENSBTAG00000007875	SAFB	100	76.413	ENSRBIG00000042509	SAFB	88	92.473	Rhinopithecus_bieti
ENSBTAG00000007875	SAFB	100	89.216	ENSRROG00000029278	SAFB	100	89.216	Rhinopithecus_roxellana
ENSBTAG00000007875	SAFB	100	89.204	ENSSBOG00000026291	SAFB	100	89.204	Saimiri_boliviensis_boliviensis
ENSBTAG00000007875	SAFB	95	43.550	ENSSFOG00015008156	safb	95	46.652	Scleropages_formosus
ENSBTAG00000007875	SAFB	93	41.096	ENSSMAG00000009316	safb	98	42.889	Scophthalmus_maximus
ENSBTAG00000007875	SAFB	95	40.853	ENSSDUG00000009652	safb	97	41.855	Seriola_dumerili
ENSBTAG00000007875	SAFB	95	43.189	ENSSLDG00000001670	safb	95	43.300	Seriola_lalandi_dorsalis
ENSBTAG00000007875	SAFB	93	81.637	ENSSARG00000010475	SAFB	100	82.339	Sorex_araneus
ENSBTAG00000007875	SAFB	56	59.725	ENSSPUG00000009747	-	99	58.742	Sphenodon_punctatus
ENSBTAG00000007875	SAFB	94	40.138	ENSSPAG00000015682	safb	98	39.540	Stegastes_partitus
ENSBTAG00000007875	SAFB	100	90.312	ENSSSCG00000013522	SAFB	99	92.931	Sus_scrofa
ENSBTAG00000007875	SAFB	97	64.189	ENSTGUG00000000502	-	97	64.965	Taeniopygia_guttata
ENSBTAG00000007875	SAFB	67	61.736	ENSTGUG00000000489	-	97	65.141	Taeniopygia_guttata
ENSBTAG00000007875	SAFB	93	40.343	ENSTRUG00000003567	safb	95	42.632	Takifugu_rubripes
ENSBTAG00000007875	SAFB	89	44.086	ENSTNIG00000015470	safb	100	42.807	Tetraodon_nigroviridis
ENSBTAG00000007875	SAFB	68	88.060	ENSTBEG00000013124	-	66	88.060	Tupaia_belangeri
ENSBTAG00000007875	SAFB	92	92.179	ENSTTRG00000013588	SAFB	92	92.692	Tursiops_truncatus
ENSBTAG00000007875	SAFB	78	88.260	ENSUAMG00000024543	SAFB	100	83.632	Ursus_americanus
ENSBTAG00000007875	SAFB	88	91.803	ENSUMAG00000009734	SAFB	95	91.774	Ursus_maritimus
ENSBTAG00000007875	SAFB	72	89.565	ENSVPAG00000012043	SAFB	78	89.489	Vicugna_pacos
ENSBTAG00000007875	SAFB	100	91.285	ENSVVUG00000013720	SAFB	87	91.285	Vulpes_vulpes
ENSBTAG00000007875	SAFB	67	50.412	ENSXETG00000008755	safb	97	53.529	Xenopus_tropicalis
ENSBTAG00000007875	SAFB	96	38.137	ENSXMAG00000003458	safb	63	47.028	Xiphophorus_maculatus