EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000007979 (Gene tree)
Gene ID: 767620
Gene Symbol: TNPO1
Alias: -
Full Name: Bos taurus transportin 1 (TNPO1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 88528 bases
Position: chr20:8728071-8816598
Accession: NM_001076540
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000068082	IBN_N	PF03810.19	7.4e-16	1	1
ENSBTAP00000058013	IBN_N	PF03810.19	7.6e-16	1	1
ENSBTAP00000010491	IBN_N	PF03810.19	7.7e-16	1	1
ENSBTAP00000073075	IBN_N	PF03810.19	8.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000010491	-	3131	XM_024981408	ENSBTAP00000010491	898 (aa)	XP_024837174	Q3SYU7
ENSBTAT00000076134	-	2636	-	ENSBTAP00000073075	866 (aa)	XP_024837177	UPI000D53B699
ENSBTAT00000079623	-	2697	-	ENSBTAP00000058013	898 (aa)	-	-
ENSBTAT00000079879	-	2637	-	ENSBTAP00000068082	878 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000007979's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000007979's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000007979	TNPO1	99	85.344	ENSBTAG00000011811	TNPO2	99	85.457

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000007979	TNPO1	100	99.777	ENSG00000083312	TNPO1	100	100.000	Homo_sapiens
ENSBTAG00000007979	TNPO1	99	93.933	ENSAPOG00000003453	tnpo1	100	93.933	Acanthochromis_polyacanthus
ENSBTAG00000007979	TNPO1	100	98.344	ENSAMEG00000007147	TNPO1	100	98.344	Ailuropoda_melanoleuca
ENSBTAG00000007979	TNPO1	86	93.023	ENSACIG00000003711	tnpo1	99	93.023	Amphilophus_citrinellus
ENSBTAG00000007979	TNPO1	99	94.045	ENSAOCG00000008154	tnpo1	100	94.045	Amphiprion_ocellaris
ENSBTAG00000007979	TNPO1	99	94.045	ENSAPEG00000001112	tnpo1	100	94.045	Amphiprion_percula
ENSBTAG00000007979	TNPO1	99	93.596	ENSATEG00000010408	tnpo1	100	93.596	Anabas_testudineus
ENSBTAG00000007979	TNPO1	98	92.559	ENSAPLG00000009619	-	97	93.678	Anas_platyrhynchos
ENSBTAG00000007979	TNPO1	99	96.854	ENSACAG00000009599	TNPO1	100	96.854	Anolis_carolinensis
ENSBTAG00000007979	TNPO1	100	88.307	ENSANAG00000025351	-	100	88.307	Aotus_nancymaae
ENSBTAG00000007979	TNPO1	100	99.332	ENSANAG00000022453	-	100	99.332	Aotus_nancymaae
ENSBTAG00000007979	TNPO1	99	64.309	ENSANAG00000027118	-	99	64.088	Aotus_nancymaae
ENSBTAG00000007979	TNPO1	99	91.685	ENSACLG00000027223	tnpo1	100	91.685	Astatotilapia_calliptera
ENSBTAG00000007979	TNPO1	99	92.825	ENSAMXG00000009842	tnpo1	100	92.489	Astyanax_mexicanus
ENSBTAG00000007979	TNPO1	100	99.443	ENSCJAG00000016409	TNPO1	100	99.443	Callithrix_jacchus
ENSBTAG00000007979	TNPO1	95	99.533	ENSCAFG00000008081	TNPO1	100	99.533	Canis_familiaris
ENSBTAG00000007979	TNPO1	100	98.292	ENSCAFG00020017397	TNPO1	100	98.292	Canis_lupus_dingo
ENSBTAG00000007979	TNPO1	100	99.889	ENSCHIG00000023462	TNPO1	100	99.889	Capra_hircus
ENSBTAG00000007979	TNPO1	99	95.706	ENSTSYG00000001871	TNPO1	100	94.961	Carlito_syrichta
ENSBTAG00000007979	TNPO1	100	99.332	ENSCCAG00000026472	TNPO1	100	99.332	Cebus_capucinus
ENSBTAG00000007979	TNPO1	100	99.777	ENSCATG00000043792	TNPO1	100	99.777	Cercocebus_atys
ENSBTAG00000007979	TNPO1	100	99.332	ENSCLAG00000016191	TNPO1	100	99.332	Chinchilla_lanigera
ENSBTAG00000007979	TNPO1	100	99.889	ENSCSAG00000015616	TNPO1	100	99.889	Chlorocebus_sabaeus
ENSBTAG00000007979	TNPO1	94	87.131	ENSCHOG00000001746	TNPO1	100	87.131	Choloepus_hoffmanni
ENSBTAG00000007979	TNPO1	99	97.643	ENSCPBG00000000260	TNPO1	94	97.643	Chrysemys_picta_bellii
ENSBTAG00000007979	TNPO1	99	75.533	ENSCSAVG00000010981	-	99	75.533	Ciona_savignyi
ENSBTAG00000007979	TNPO1	100	99.777	ENSCANG00000004353	TNPO1	100	99.777	Colobus_angolensis_palliatus
ENSBTAG00000007979	TNPO1	100	99.443	ENSCGRG00001016580	Tnpo1	100	99.443	Cricetulus_griseus_chok1gshd
ENSBTAG00000007979	TNPO1	95	99.415	ENSCGRG00000010366	Tnpo1	100	99.415	Cricetulus_griseus_crigri
ENSBTAG00000007979	TNPO1	99	92.360	ENSCSEG00000012674	tnpo1	100	92.360	Cynoglossus_semilaevis
ENSBTAG00000007979	TNPO1	99	93.146	ENSCVAG00000001010	tnpo1	100	93.146	Cyprinodon_variegatus
ENSBTAG00000007979	TNPO1	99	92.480	ENSDARG00000035390	tnpo1	100	92.144	Danio_rerio
ENSBTAG00000007979	TNPO1	99	93.638	ENSDNOG00000006647	TNPO1	100	93.638	Dasypus_novemcinctus
ENSBTAG00000007979	TNPO1	92	99.759	ENSDORG00000006476	Tnpo1	100	99.759	Dipodomys_ordii
ENSBTAG00000007979	TNPO1	99	57.788	FBgn0035693	CG8219	99	57.223	Drosophila_melanogaster
ENSBTAG00000007979	TNPO1	86	99.625	ENSETEG00000017805	TNPO1	90	99.625	Echinops_telfairi
ENSBTAG00000007979	TNPO1	94	85.119	ENSEBUG00000001895	tnpo1	100	85.119	Eptatretus_burgeri
ENSBTAG00000007979	TNPO1	100	99.777	ENSEASG00005018055	TNPO1	100	99.777	Equus_asinus_asinus
ENSBTAG00000007979	TNPO1	100	99.555	ENSECAG00000024424	TNPO1	100	99.555	Equus_caballus
ENSBTAG00000007979	TNPO1	99	86.492	ENSELUG00000002821	tnpo1	100	86.275	Esox_lucius
ENSBTAG00000007979	TNPO1	100	99.777	ENSFCAG00000013181	TNPO1	100	99.777	Felis_catus
ENSBTAG00000007979	TNPO1	99	97.303	ENSFALG00000010292	TNPO1	100	97.303	Ficedula_albicollis
ENSBTAG00000007979	TNPO1	100	99.443	ENSFDAG00000013345	TNPO1	100	99.443	Fukomys_damarensis
ENSBTAG00000007979	TNPO1	99	93.490	ENSFHEG00000019234	tnpo1	100	93.490	Fundulus_heteroclitus
ENSBTAG00000007979	TNPO1	99	89.744	ENSGMOG00000000347	tnpo1	99	89.744	Gadus_morhua
ENSBTAG00000007979	TNPO1	100	96.214	ENSGALG00000015014	TNPO1	100	96.629	Gallus_gallus
ENSBTAG00000007979	TNPO1	99	92.265	ENSGAFG00000000943	tnpo1	100	92.265	Gambusia_affinis
ENSBTAG00000007979	TNPO1	99	93.065	ENSGACG00000015841	tnpo1	99	93.065	Gasterosteus_aculeatus
ENSBTAG00000007979	TNPO1	99	97.416	ENSGAGG00000013419	TNPO1	100	97.416	Gopherus_agassizii
ENSBTAG00000007979	TNPO1	99	83.017	ENSGGOG00000022535	-	99	83.017	Gorilla_gorilla
ENSBTAG00000007979	TNPO1	100	99.777	ENSGGOG00000026800	TNPO1	100	99.777	Gorilla_gorilla
ENSBTAG00000007979	TNPO1	99	93.258	ENSHBUG00000008068	tnpo1	100	93.258	Haplochromis_burtoni
ENSBTAG00000007979	TNPO1	100	99.332	ENSHGLG00000000970	-	100	99.332	Heterocephalus_glaber_female
ENSBTAG00000007979	TNPO1	95	99.182	ENSHGLG00100017090	-	99	99.182	Heterocephalus_glaber_male
ENSBTAG00000007979	TNPO1	100	75.390	ENSHGLG00100000963	-	100	74.833	Heterocephalus_glaber_male
ENSBTAG00000007979	TNPO1	99	99.441	ENSJJAG00000010244	Tnpo1	97	99.441	Jaculus_jaculus
ENSBTAG00000007979	TNPO1	99	93.483	ENSKMAG00000018195	tnpo1	100	93.483	Kryptolebias_marmoratus
ENSBTAG00000007979	TNPO1	90	90.012	ENSLBEG00000009521	tnpo1	96	90.012	Labrus_bergylta
ENSBTAG00000007979	TNPO1	95	89.070	ENSLACG00000012199	TNPO1	100	89.070	Latimeria_chalumnae
ENSBTAG00000007979	TNPO1	99	95.190	ENSLOCG00000011092	tnpo1	98	95.190	Lepisosteus_oculatus
ENSBTAG00000007979	TNPO1	96	98.961	ENSLAFG00000011796	TNPO1	100	98.961	Loxodonta_africana
ENSBTAG00000007979	TNPO1	100	99.777	ENSMFAG00000003636	TNPO1	100	99.777	Macaca_fascicularis
ENSBTAG00000007979	TNPO1	100	99.666	ENSMMUG00000020923	TNPO1	100	99.666	Macaca_mulatta
ENSBTAG00000007979	TNPO1	100	99.777	ENSMNEG00000044581	TNPO1	100	99.777	Macaca_nemestrina
ENSBTAG00000007979	TNPO1	100	99.777	ENSMLEG00000030740	TNPO1	100	99.777	Mandrillus_leucophaeus
ENSBTAG00000007979	TNPO1	99	93.596	ENSMAMG00000001357	tnpo1	100	93.596	Mastacembelus_armatus
ENSBTAG00000007979	TNPO1	99	93.034	ENSMZEG00005004913	tnpo1	100	93.034	Maylandia_zebra
ENSBTAG00000007979	TNPO1	99	99.330	ENSMAUG00000020550	Tnpo1	100	100.000	Mesocricetus_auratus
ENSBTAG00000007979	TNPO1	99	95.633	ENSMICG00000008468	TNPO1	99	95.633	Microcebus_murinus
ENSBTAG00000007979	TNPO1	100	98.886	ENSMOCG00000009301	Tnpo1	99	99.329	Microtus_ochrogaster
ENSBTAG00000007979	TNPO1	86	92.655	ENSMMOG00000005551	tnpo1	99	92.655	Mola_mola
ENSBTAG00000007979	TNPO1	99	97.872	ENSMODG00000001721	TNPO1	80	97.872	Monodelphis_domestica
ENSBTAG00000007979	TNPO1	99	92.472	ENSMALG00000009782	tnpo1	100	92.472	Monopterus_albus
ENSBTAG00000007979	TNPO1	100	99.443	MGP_CAROLIEiJ_G0018826	Tnpo1	100	100.000	Mus_caroli
ENSBTAG00000007979	TNPO1	100	99.443	ENSMUSG00000009470	Tnpo1	100	100.000	Mus_musculus
ENSBTAG00000007979	TNPO1	100	99.555	MGP_PahariEiJ_G0015901	Tnpo1	100	100.000	Mus_pahari
ENSBTAG00000007979	TNPO1	100	99.220	MGP_SPRETEiJ_G0019708	Tnpo1	100	100.000	Mus_spretus
ENSBTAG00000007979	TNPO1	100	99.666	ENSMPUG00000014387	TNPO1	100	99.666	Mustela_putorius_furo
ENSBTAG00000007979	TNPO1	95	99.069	ENSMLUG00000016317	TNPO1	100	99.069	Myotis_lucifugus
ENSBTAG00000007979	TNPO1	100	99.443	ENSNGAG00000021263	Tnpo1	100	99.443	Nannospalax_galili
ENSBTAG00000007979	TNPO1	86	92.894	ENSNBRG00000009998	tnpo1	99	92.894	Neolamprologus_brichardi
ENSBTAG00000007979	TNPO1	100	99.777	ENSNLEG00000004572	TNPO1	100	99.777	Nomascus_leucogenys
ENSBTAG00000007979	TNPO1	91	92.966	ENSOPRG00000012390	TNPO1	91	92.966	Ochotona_princeps
ENSBTAG00000007979	TNPO1	100	99.109	ENSODEG00000001771	TNPO1	100	99.109	Octodon_degus
ENSBTAG00000007979	TNPO1	100	91.814	ENSONIG00000011151	tnpo1	100	91.814	Oreochromis_niloticus
ENSBTAG00000007979	TNPO1	91	97.805	ENSOANG00000015785	TNPO1	100	97.805	Ornithorhynchus_anatinus
ENSBTAG00000007979	TNPO1	95	93.107	ENSOCUG00000013318	TNPO1	100	93.107	Oryctolagus_cuniculus
ENSBTAG00000007979	TNPO1	86	92.607	ENSORLG00000003182	tnpo1	99	92.607	Oryzias_latipes
ENSBTAG00000007979	TNPO1	99	92.897	ENSORLG00020011559	tnpo1	99	92.897	Oryzias_latipes_hni
ENSBTAG00000007979	TNPO1	99	93.010	ENSORLG00015019113	tnpo1	99	93.010	Oryzias_latipes_hsok
ENSBTAG00000007979	TNPO1	99	92.897	ENSOMEG00000014567	tnpo1	99	92.897	Oryzias_melastigma
ENSBTAG00000007979	TNPO1	100	99.889	ENSOGAG00000000808	TNPO1	100	99.889	Otolemur_garnettii
ENSBTAG00000007979	TNPO1	100	100.000	ENSOARG00000005038	TNPO1	84	100.000	Ovis_aries
ENSBTAG00000007979	TNPO1	100	99.777	ENSPPAG00000042518	TNPO1	100	99.777	Pan_paniscus
ENSBTAG00000007979	TNPO1	100	99.777	ENSPPRG00000022336	TNPO1	100	99.777	Panthera_pardus
ENSBTAG00000007979	TNPO1	100	99.777	ENSPTIG00000018839	TNPO1	100	99.777	Panthera_tigris_altaica
ENSBTAG00000007979	TNPO1	100	99.777	ENSPTRG00000016972	TNPO1	100	99.777	Pan_troglodytes
ENSBTAG00000007979	TNPO1	93	86.740	ENSPTRG00000047731	-	100	86.740	Pan_troglodytes
ENSBTAG00000007979	TNPO1	100	99.777	ENSPANG00000006074	TNPO1	100	99.777	Papio_anubis
ENSBTAG00000007979	TNPO1	99	90.449	ENSPKIG00000019795	tnpo1	100	90.449	Paramormyrops_kingsleyae
ENSBTAG00000007979	TNPO1	100	96.882	ENSPSIG00000014366	TNPO1	100	96.882	Pelodiscus_sinensis
ENSBTAG00000007979	TNPO1	99	90.348	ENSPMGG00000017014	tnpo1	100	90.460	Periophthalmus_magnuspinnatus
ENSBTAG00000007979	TNPO1	95	99.415	ENSPEMG00000007444	Tnpo1	100	99.415	Peromyscus_maniculatus_bairdii
ENSBTAG00000007979	TNPO1	99	98.427	ENSPCIG00000026080	TNPO1	100	98.427	Phascolarctos_cinereus
ENSBTAG00000007979	TNPO1	99	93.057	ENSPFOG00000011447	tnpo1	100	93.057	Poecilia_formosa
ENSBTAG00000007979	TNPO1	99	93.057	ENSPLAG00000018696	tnpo1	100	93.057	Poecilia_latipinna
ENSBTAG00000007979	TNPO1	99	93.258	ENSPMEG00000024121	tnpo1	100	93.258	Poecilia_mexicana
ENSBTAG00000007979	TNPO1	99	93.161	ENSPREG00000020705	tnpo1	100	93.161	Poecilia_reticulata
ENSBTAG00000007979	TNPO1	100	99.666	ENSPPYG00000015545	TNPO1	100	99.666	Pongo_abelii
ENSBTAG00000007979	TNPO1	100	99.666	ENSPCOG00000004254	TNPO1	100	99.666	Propithecus_coquereli
ENSBTAG00000007979	TNPO1	100	99.443	ENSPVAG00000013051	TNPO1	100	99.443	Pteropus_vampyrus
ENSBTAG00000007979	TNPO1	99	93.042	ENSPNYG00000001522	tnpo1	100	93.042	Pundamilia_nyererei
ENSBTAG00000007979	TNPO1	99	92.049	ENSPNAG00000021484	tnpo1	100	92.713	Pygocentrus_nattereri
ENSBTAG00000007979	TNPO1	99	99.213	ENSRNOG00000014999	Tnpo1	100	99.213	Rattus_norvegicus
ENSBTAG00000007979	TNPO1	100	99.777	ENSRBIG00000021642	TNPO1	100	99.777	Rhinopithecus_bieti
ENSBTAG00000007979	TNPO1	100	99.777	ENSRROG00000035271	TNPO1	100	99.777	Rhinopithecus_roxellana
ENSBTAG00000007979	TNPO1	100	99.443	ENSSBOG00000029256	TNPO1	100	99.443	Saimiri_boliviensis_boliviensis
ENSBTAG00000007979	TNPO1	96	97.917	ENSSHAG00000007120	TNPO1	100	97.917	Sarcophilus_harrisii
ENSBTAG00000007979	TNPO1	99	94.388	ENSSFOG00015015448	tnpo1	100	94.388	Scleropages_formosus
ENSBTAG00000007979	TNPO1	95	93.575	ENSSMAG00000011202	tnpo1	97	93.575	Scophthalmus_maximus
ENSBTAG00000007979	TNPO1	99	93.933	ENSSDUG00000007943	tnpo1	100	93.933	Seriola_dumerili
ENSBTAG00000007979	TNPO1	99	93.933	ENSSLDG00000014578	tnpo1	100	93.933	Seriola_lalandi_dorsalis
ENSBTAG00000007979	TNPO1	99	96.517	ENSSPUG00000000149	TNPO1	100	96.517	Sphenodon_punctatus
ENSBTAG00000007979	TNPO1	99	94.045	ENSSPAG00000000258	tnpo1	100	94.045	Stegastes_partitus
ENSBTAG00000007979	TNPO1	99	99.888	ENSSSCG00000027293	TNPO1	100	99.888	Sus_scrofa
ENSBTAG00000007979	TNPO1	99	95.089	ENSTGUG00000005729	TNPO1	100	95.089	Taeniopygia_guttata
ENSBTAG00000007979	TNPO1	99	93.034	ENSTRUG00000018491	tnpo1	100	93.034	Takifugu_rubripes
ENSBTAG00000007979	TNPO1	71	88.799	ENSTNIG00000007483	tnpo1	100	88.799	Tetraodon_nigroviridis
ENSBTAG00000007979	TNPO1	87	100.000	ENSTBEG00000007848	TNPO1	86	100.000	Tupaia_belangeri
ENSBTAG00000007979	TNPO1	95	95.789	ENSTTRG00000000209	TNPO1	95	95.789	Tursiops_truncatus
ENSBTAG00000007979	TNPO1	99	99.775	ENSUMAG00000007635	TNPO1	100	99.775	Ursus_maritimus
ENSBTAG00000007979	TNPO1	100	95.768	ENSVPAG00000009601	TNPO1	100	95.768	Vicugna_pacos
ENSBTAG00000007979	TNPO1	99	99.775	ENSVVUG00000007338	TNPO1	100	99.775	Vulpes_vulpes
ENSBTAG00000007979	TNPO1	99	94.382	ENSXETG00000016812	tnpo1	99	94.382	Xenopus_tropicalis
ENSBTAG00000007979	TNPO1	99	92.929	ENSXMAG00000005440	tnpo1	100	92.929	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005515	protein binding	20965181.	IPI	Function
GO:0008536	Ran GTPase binding	-	IEA	Function