EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000008105 (Gene tree)
Gene ID: 533516
Gene Symbol: RBM38
Alias: -
Full Name: Bos taurus RNA binding motif protein 38 (RBM38)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 15668 bases
Position: chr13:58757856-58773523
Accession: NM_001206023
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000010660	RRM_1	PF00076.22	6.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
					(aa)

Gene Model

Click here to download ENSBTAG00000008105's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000008105's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000008105	RBM38	90	61.017	ENSBTAG00000015396	RBM24	100	66.807
ENSBTAG00000008105	RBM38	54	36.842	ENSBTAG00000009800	MSI1	85	36.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000008105	RBM38	100	96.234	ENSG00000132819	RBM38	100	97.521	Homo_sapiens
ENSBTAG00000008105	RBM38	89	59.483	ENSAPOG00000003301	rbm38	91	59.483	Acanthochromis_polyacanthus
ENSBTAG00000008105	RBM38	91	67.873	ENSAPOG00000009939	-	94	68.326	Acanthochromis_polyacanthus
ENSBTAG00000008105	RBM38	89	57.511	ENSACIG00000000010	rbm38	91	57.511	Amphilophus_citrinellus
ENSBTAG00000008105	RBM38	89	68.664	ENSACIG00000012502	-	100	87.179	Amphilophus_citrinellus
ENSBTAG00000008105	RBM38	89	59.483	ENSAOCG00000013497	-	91	59.483	Amphiprion_ocellaris
ENSBTAG00000008105	RBM38	99	64.463	ENSAOCG00000012559	RBM38	99	64.609	Amphiprion_ocellaris
ENSBTAG00000008105	RBM38	91	63.445	ENSAPEG00000023581	-	95	64.135	Amphiprion_percula
ENSBTAG00000008105	RBM38	99	60.656	ENSAPEG00000013137	rbm38	99	60.656	Amphiprion_percula
ENSBTAG00000008105	RBM38	90	61.161	ENSATEG00000016366	rbm38	94	61.161	Anabas_testudineus
ENSBTAG00000008105	RBM38	89	64.783	ENSATEG00000016710	-	92	65.801	Anabas_testudineus
ENSBTAG00000008105	RBM38	91	77.273	ENSACAG00000016238	RBM38	97	73.729	Anolis_carolinensis
ENSBTAG00000008105	RBM38	90	95.370	ENSANAG00000031959	RBM38	100	98.347	Aotus_nancymaae
ENSBTAG00000008105	RBM38	89	66.087	ENSACLG00000019514	-	92	66.234	Astatotilapia_calliptera
ENSBTAG00000008105	RBM38	91	66.522	ENSAMXG00000015601	-	95	67.391	Astyanax_mexicanus
ENSBTAG00000008105	RBM38	88	56.757	ENSAMXG00000038120	rbm38	92	57.207	Astyanax_mexicanus
ENSBTAG00000008105	RBM38	50	69.048	WBGene00006321	sup-12	59	84.270	Caenorhabditis_elegans
ENSBTAG00000008105	RBM38	100	95.397	ENSCJAG00000019139	RBM38	100	98.347	Callithrix_jacchus
ENSBTAG00000008105	RBM38	100	95.397	ENSCAFG00020021943	RBM38	100	95.397	Canis_lupus_dingo
ENSBTAG00000008105	RBM38	100	98.326	ENSCHIG00000002609	RBM38	100	98.326	Capra_hircus
ENSBTAG00000008105	RBM38	100	94.142	ENSCPOG00000012781	RBM38	100	94.142	Cavia_porcellus
ENSBTAG00000008105	RBM38	100	95.397	ENSCCAG00000036872	RBM38	100	98.347	Cebus_capucinus
ENSBTAG00000008105	RBM38	100	95.816	ENSCATG00000032133	RBM38	100	98.347	Cercocebus_atys
ENSBTAG00000008105	RBM38	96	93.913	ENSCLAG00000005906	RBM38	100	93.913	Chinchilla_lanigera
ENSBTAG00000008105	RBM38	100	95.816	ENSCSAG00000015503	RBM38	100	95.816	Chlorocebus_sabaeus
ENSBTAG00000008105	RBM38	90	80.275	ENSCPBG00000024059	RBM38	100	80.275	Chrysemys_picta_bellii
ENSBTAG00000008105	RBM38	63	62.025	ENSCING00000025102	-	68	62.025	Ciona_intestinalis
ENSBTAG00000008105	RBM38	64	63.291	ENSCSAVG00000001132	-	76	56.585	Ciona_savignyi
ENSBTAG00000008105	RBM38	99	73.950	ENSCANG00000030105	-	89	73.950	Colobus_angolensis_palliatus
ENSBTAG00000008105	RBM38	100	90.377	ENSCGRG00001012928	Rbm38	100	90.377	Cricetulus_griseus_chok1gshd
ENSBTAG00000008105	RBM38	62	67.333	ENSCSEG00000020943	rbm38	60	60.870	Cynoglossus_semilaevis
ENSBTAG00000008105	RBM38	89	70.183	ENSCSEG00000004701	-	93	70.776	Cynoglossus_semilaevis
ENSBTAG00000008105	RBM38	89	64.935	ENSCVAG00000005472	-	92	66.239	Cyprinodon_variegatus
ENSBTAG00000008105	RBM38	88	59.914	ENSCVAG00000015952	rbm38	91	60.515	Cyprinodon_variegatus
ENSBTAG00000008105	RBM38	88	64.126	ENSDARG00000058818	rbm38	92	64.126	Danio_rerio
ENSBTAG00000008105	RBM38	90	87.500	ENSDNOG00000032004	RBM38	100	87.500	Dasypus_novemcinctus
ENSBTAG00000008105	RBM38	61	66.216	ENSEBUG00000015164	rbm38	88	66.216	Eptatretus_burgeri
ENSBTAG00000008105	RBM38	100	95.397	ENSECAG00000007700	RBM38	100	95.397	Equus_caballus
ENSBTAG00000008105	RBM38	100	92.083	ENSEEUG00000013489	RBM38	100	93.333	Erinaceus_europaeus
ENSBTAG00000008105	RBM38	90	65.678	ENSELUG00000005849	-	95	65.678	Esox_lucius
ENSBTAG00000008105	RBM38	81	66.154	ENSELUG00000000585	-	84	66.154	Esox_lucius
ENSBTAG00000008105	RBM38	100	96.234	ENSFCAG00000042916	RBM38	100	98.347	Felis_catus
ENSBTAG00000008105	RBM38	74	82.022	ENSFALG00000010805	RBM38	99	78.646	Ficedula_albicollis
ENSBTAG00000008105	RBM38	89	57.940	ENSFHEG00000017748	rbm38	91	57.940	Fundulus_heteroclitus
ENSBTAG00000008105	RBM38	89	71.163	ENSFHEG00000006160	-	92	71.163	Fundulus_heteroclitus
ENSBTAG00000008105	RBM38	75	70.718	ENSGMOG00000016655	-	96	73.626	Gadus_morhua
ENSBTAG00000008105	RBM38	90	78.440	ENSGALG00000026081	RBM38	100	78.440	Gallus_gallus
ENSBTAG00000008105	RBM38	90	67.713	ENSGACG00000009873	-	100	67.411	Gasterosteus_aculeatus
ENSBTAG00000008105	RBM38	89	63.208	ENSGACG00000015224	rbm38	98	63.208	Gasterosteus_aculeatus
ENSBTAG00000008105	RBM38	90	80.734	ENSGAGG00000001187	RBM38	100	80.734	Gopherus_agassizii
ENSBTAG00000008105	RBM38	89	61.818	ENSHBUG00000012058	rbm38	89	61.818	Haplochromis_burtoni
ENSBTAG00000008105	RBM38	89	70.046	ENSHBUG00000011778	-	92	70.183	Haplochromis_burtoni
ENSBTAG00000008105	RBM38	100	90.795	ENSHGLG00000015077	RBM38	100	90.795	Heterocephalus_glaber_female
ENSBTAG00000008105	RBM38	63	66.887	ENSHCOG00000019040	rbm38	65	66.887	Hippocampus_comes
ENSBTAG00000008105	RBM38	79	71.875	ENSHCOG00000005622	-	54	72.396	Hippocampus_comes
ENSBTAG00000008105	RBM38	91	65.086	ENSIPUG00000019349	-	95	65.086	Ictalurus_punctatus
ENSBTAG00000008105	RBM38	88	54.274	ENSKMAG00000012402	rbm38	98	54.701	Kryptolebias_marmoratus
ENSBTAG00000008105	RBM38	89	69.585	ENSLBEG00000016163	RBM38	92	69.725	Labrus_bergylta
ENSBTAG00000008105	RBM38	89	58.798	ENSLBEG00000018878	rbm38	91	58.798	Labrus_bergylta
ENSBTAG00000008105	RBM38	91	70.667	ENSLOCG00000003456	rbm38	95	70.667	Lepisosteus_oculatus
ENSBTAG00000008105	RBM38	98	95.745	ENSMFAG00000043808	RBM38	97	98.291	Macaca_fascicularis
ENSBTAG00000008105	RBM38	100	95.816	ENSMMUG00000031391	RBM38	100	98.347	Macaca_mulatta
ENSBTAG00000008105	RBM38	100	95.816	ENSMNEG00000034683	RBM38	100	98.347	Macaca_nemestrina
ENSBTAG00000008105	RBM38	91	64.135	ENSMAMG00000020499	RBM38	95	65.823	Mastacembelus_armatus
ENSBTAG00000008105	RBM38	89	59.657	ENSMAMG00000024135	rbm38	91	59.657	Mastacembelus_armatus
ENSBTAG00000008105	RBM38	89	58.369	ENSMZEG00005026036	rbm38	91	58.369	Maylandia_zebra
ENSBTAG00000008105	RBM38	89	70.046	ENSMZEG00005000849	-	92	70.183	Maylandia_zebra
ENSBTAG00000008105	RBM38	100	91.213	ENSMAUG00000021211	Rbm38	100	91.213	Mesocricetus_auratus
ENSBTAG00000008105	RBM38	90	95.370	ENSMICG00000038011	RBM38	100	95.370	Microcebus_murinus
ENSBTAG00000008105	RBM38	100	89.958	ENSMOCG00000008715	Rbm38	100	89.958	Microtus_ochrogaster
ENSBTAG00000008105	RBM38	99	65.000	ENSMMOG00000020051	-	99	65.145	Mola_mola
ENSBTAG00000008105	RBM38	100	78.423	ENSMODG00000016458	RBM38	100	78.423	Monodelphis_domestica
ENSBTAG00000008105	RBM38	77	73.016	ENSMALG00000004680	RBM38	70	73.016	Monopterus_albus
ENSBTAG00000008105	RBM38	90	57.727	ENSMALG00000022327	rbm38	93	57.965	Monopterus_albus
ENSBTAG00000008105	RBM38	100	90.795	MGP_CAROLIEiJ_G0024745	Rbm38	100	90.795	Mus_caroli
ENSBTAG00000008105	RBM38	100	91.213	ENSMUSG00000027510	Rbm38	100	91.213	Mus_musculus
ENSBTAG00000008105	RBM38	100	90.377	MGP_PahariEiJ_G0026186	Rbm38	100	90.377	Mus_pahari
ENSBTAG00000008105	RBM38	100	90.795	MGP_SPRETEiJ_G0025665	Rbm38	100	90.795	Mus_spretus
ENSBTAG00000008105	RBM38	77	97.297	ENSMPUG00000006518	RBM38	93	97.326	Mustela_putorius_furo
ENSBTAG00000008105	RBM38	90	91.667	ENSMLUG00000011140	RBM38	100	91.667	Myotis_lucifugus
ENSBTAG00000008105	RBM38	89	66.087	ENSNBRG00000022545	-	92	66.234	Neolamprologus_brichardi
ENSBTAG00000008105	RBM38	90	61.161	ENSNBRG00000022685	rbm38	91	61.161	Neolamprologus_brichardi
ENSBTAG00000008105	RBM38	58	77.536	ENSMEUG00000005475	-	100	77.536	Notamacropus_eugenii
ENSBTAG00000008105	RBM38	100	94.979	ENSODEG00000007980	RBM38	100	94.979	Octodon_degus
ENSBTAG00000008105	RBM38	88	58.621	ENSONIG00000017073	rbm38	93	58.621	Oreochromis_niloticus
ENSBTAG00000008105	RBM38	88	65.939	ENSONIG00000020324	-	92	66.087	Oreochromis_niloticus
ENSBTAG00000008105	RBM38	97	76.293	ENSOANG00000009259	RBM38	90	75.424	Ornithorhynchus_anatinus
ENSBTAG00000008105	RBM38	89	56.410	ENSORLG00000012154	rbm38	91	55.556	Oryzias_latipes
ENSBTAG00000008105	RBM38	89	64.224	ENSORLG00000027180	-	92	65.236	Oryzias_latipes
ENSBTAG00000008105	RBM38	95	60.784	ENSORLG00020020751	-	98	61.719	Oryzias_latipes_hni
ENSBTAG00000008105	RBM38	89	56.410	ENSORLG00020017871	rbm38	91	56.410	Oryzias_latipes_hni
ENSBTAG00000008105	RBM38	97	58.298	ENSORLG00015012606	rbm38	97	58.298	Oryzias_latipes_hsok
ENSBTAG00000008105	RBM38	89	63.636	ENSORLG00015017040	-	92	66.094	Oryzias_latipes_hsok
ENSBTAG00000008105	RBM38	89	62.771	ENSOMEG00000023912	-	92	63.636	Oryzias_melastigma
ENSBTAG00000008105	RBM38	89	55.983	ENSOMEG00000006805	rbm38	91	55.983	Oryzias_melastigma
ENSBTAG00000008105	RBM38	100	95.833	ENSOGAG00000029136	RBM38	100	95.833	Otolemur_garnettii
ENSBTAG00000008105	RBM38	100	96.234	ENSPPRG00000009507	RBM38	100	98.347	Panthera_pardus
ENSBTAG00000008105	RBM38	87	93.750	ENSPTRG00000013661	RBM38	100	97.521	Pan_troglodytes
ENSBTAG00000008105	RBM38	52	97.581	ENSPTRG00000045845	-	68	97.581	Pan_troglodytes
ENSBTAG00000008105	RBM38	100	95.816	ENSPANG00000020919	-	100	98.347	Papio_anubis
ENSBTAG00000008105	RBM38	99	73.950	ENSPANG00000033127	-	100	73.950	Papio_anubis
ENSBTAG00000008105	RBM38	91	67.401	ENSPKIG00000018122	-	100	87.179	Paramormyrops_kingsleyae
ENSBTAG00000008105	RBM38	94	62.705	ENSPKIG00000025417	rbm38	98	62.705	Paramormyrops_kingsleyae
ENSBTAG00000008105	RBM38	93	78.571	ENSPSIG00000011649	RBM38	95	78.571	Pelodiscus_sinensis
ENSBTAG00000008105	RBM38	89	61.538	ENSPMGG00000017094	-	92	62.128	Periophthalmus_magnuspinnatus
ENSBTAG00000008105	RBM38	90	56.723	ENSPMGG00000011343	rbm38	94	57.983	Periophthalmus_magnuspinnatus
ENSBTAG00000008105	RBM38	100	78.423	ENSPCIG00000013648	RBM38	100	78.423	Phascolarctos_cinereus
ENSBTAG00000008105	RBM38	89	56.118	ENSPFOG00000011658	rbm38	91	58.974	Poecilia_formosa
ENSBTAG00000008105	RBM38	89	56.962	ENSPLAG00000005218	rbm38	91	58.974	Poecilia_latipinna
ENSBTAG00000008105	RBM38	89	65.957	ENSPLAG00000002500	-	92	66.383	Poecilia_latipinna
ENSBTAG00000008105	RBM38	89	56.118	ENSPMEG00000015770	rbm38	91	58.974	Poecilia_mexicana
ENSBTAG00000008105	RBM38	89	56.540	ENSPREG00000007398	rbm38	91	59.402	Poecilia_reticulata
ENSBTAG00000008105	RBM38	100	94.167	ENSPCOG00000026201	RBM38	100	97.541	Propithecus_coquereli
ENSBTAG00000008105	RBM38	100	67.364	ENSPVAG00000006457	RBM38	100	67.364	Pteropus_vampyrus
ENSBTAG00000008105	RBM38	89	61.111	ENSPNYG00000021373	rbm38	89	61.468	Pundamilia_nyererei
ENSBTAG00000008105	RBM38	89	70.046	ENSPNYG00000019727	-	100	88.034	Pundamilia_nyererei
ENSBTAG00000008105	RBM38	89	61.607	ENSPNAG00000010596	rbm38	93	61.607	Pygocentrus_nattereri
ENSBTAG00000008105	RBM38	91	66.087	ENSPNAG00000015123	-	96	76.515	Pygocentrus_nattereri
ENSBTAG00000008105	RBM38	100	90.795	ENSRNOG00000006420	Rbm38	100	90.795	Rattus_norvegicus
ENSBTAG00000008105	RBM38	100	78.661	ENSRROG00000036388	-	100	78.661	Rhinopithecus_roxellana
ENSBTAG00000008105	RBM38	90	94.444	ENSSBOG00000031053	RBM38	99	99.057	Saimiri_boliviensis_boliviensis
ENSBTAG00000008105	RBM38	89	65.909	ENSSFOG00015004453	rbm38	92	69.091	Scleropages_formosus
ENSBTAG00000008105	RBM38	89	65.517	ENSSDUG00000021082	RBM38	92	65.948	Seriola_dumerili
ENSBTAG00000008105	RBM38	89	60.515	ENSSDUG00000022611	rbm38	91	60.515	Seriola_dumerili
ENSBTAG00000008105	RBM38	89	65.517	ENSSLDG00000011778	RBM38	92	65.948	Seriola_lalandi_dorsalis
ENSBTAG00000008105	RBM38	89	63.889	ENSSLDG00000010845	rbm38	90	63.889	Seriola_lalandi_dorsalis
ENSBTAG00000008105	RBM38	89	67.606	ENSSPAG00000020989	RBM38	91	68.224	Stegastes_partitus
ENSBTAG00000008105	RBM38	89	59.227	ENSSPAG00000011113	rbm38	91	59.227	Stegastes_partitus
ENSBTAG00000008105	RBM38	100	96.653	ENSSSCG00000007504	RBM38	100	96.653	Sus_scrofa
ENSBTAG00000008105	RBM38	89	66.234	ENSTRUG00000019869	-	92	67.672	Takifugu_rubripes
ENSBTAG00000008105	RBM38	89	56.769	ENSTRUG00000024954	rbm38	91	56.332	Takifugu_rubripes
ENSBTAG00000008105	RBM38	89	69.545	ENSTNIG00000007093	-	97	70.136	Tetraodon_nigroviridis
ENSBTAG00000008105	RBM38	65	89.076	ENSTBEG00000001689	-	50	89.076	Tupaia_belangeri
ENSBTAG00000008105	RBM38	100	95.816	ENSUAMG00000019780	RBM38	100	95.816	Ursus_americanus
ENSBTAG00000008105	RBM38	100	95.397	ENSVVUG00000017246	RBM38	100	95.397	Vulpes_vulpes
ENSBTAG00000008105	RBM38	92	72.000	ENSXETG00000011268	rbm38	100	72.889	Xenopus_tropicalis
ENSBTAG00000008105	RBM38	89	58.475	ENSXMAG00000023662	rbm38	91	59.227	Xiphophorus_maculatus