EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000008472 (Gene tree)
Gene ID: 526536
Gene Symbol: CRNKL1
Alias: -
Full Name: Bos taurus crooked neck pre-mRNA splicing factor 1 (CRNKL1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 24412 bases
Position: chr13:39604529-39628940
Accession: NM_001206522
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000011148	HAT	PF02184.16	3.6e-42	1	2
ENSBTAP00000011148	HAT	PF02184.16	3.6e-42	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
					(aa)

Gene Model

Click here to download ENSBTAG00000008472's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000008472's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000008472	CRNKL1	99	96.361	ENSG00000101343	CRNKL1	100	96.361	Homo_sapiens
ENSBTAG00000008472	CRNKL1	99	86.212	ENSAPOG00000009705	crnkl1	99	85.196	Acanthochromis_polyacanthus
ENSBTAG00000008472	CRNKL1	99	98.399	ENSAMEG00000000270	CRNKL1	83	98.399	Ailuropoda_melanoleuca
ENSBTAG00000008472	CRNKL1	99	85.341	ENSACIG00000015267	crnkl1	91	85.341	Amphilophus_citrinellus
ENSBTAG00000008472	CRNKL1	99	86.502	ENSAOCG00000021964	crnkl1	91	86.502	Amphiprion_ocellaris
ENSBTAG00000008472	CRNKL1	99	86.377	ENSAPEG00000015041	crnkl1	92	86.377	Amphiprion_percula
ENSBTAG00000008472	CRNKL1	99	85.673	ENSATEG00000001068	crnkl1	91	85.673	Anabas_testudineus
ENSBTAG00000008472	CRNKL1	99	90.511	ENSAPLG00000013105	CRNKL1	99	90.511	Anas_platyrhynchos
ENSBTAG00000008472	CRNKL1	98	92.669	ENSACAG00000005284	CRNKL1	99	92.669	Anolis_carolinensis
ENSBTAG00000008472	CRNKL1	91	97.785	ENSANAG00000024889	CRNKL1	100	97.785	Aotus_nancymaae
ENSBTAG00000008472	CRNKL1	99	86.522	ENSACLG00000010813	crnkl1	91	86.522	Astatotilapia_calliptera
ENSBTAG00000008472	CRNKL1	96	88.102	ENSAMXG00000018334	crnkl1	93	86.337	Astyanax_mexicanus
ENSBTAG00000008472	CRNKL1	92	62.519	WBGene00019762	M03F8.3	93	60.745	Caenorhabditis_elegans
ENSBTAG00000008472	CRNKL1	99	96.652	ENSCJAG00000005393	CRNKL1	100	96.652	Callithrix_jacchus
ENSBTAG00000008472	CRNKL1	99	98.253	ENSCAFG00000005333	CRNKL1	94	98.253	Canis_familiaris
ENSBTAG00000008472	CRNKL1	99	98.253	ENSCAFG00020027488	CRNKL1	100	98.253	Canis_lupus_dingo
ENSBTAG00000008472	CRNKL1	100	98.268	ENSCHIG00000013171	CRNKL1	100	98.268	Capra_hircus
ENSBTAG00000008472	CRNKL1	99	96.798	ENSTSYG00000004197	CRNKL1	100	96.798	Carlito_syrichta
ENSBTAG00000008472	CRNKL1	95	95.338	ENSCAPG00000010501	CRNKL1	100	95.338	Cavia_aperea
ENSBTAG00000008472	CRNKL1	99	95.924	ENSCPOG00000004418	CRNKL1	100	95.924	Cavia_porcellus
ENSBTAG00000008472	CRNKL1	99	96.507	ENSCCAG00000027037	CRNKL1	100	96.507	Cebus_capucinus
ENSBTAG00000008472	CRNKL1	99	96.652	ENSCATG00000034247	CRNKL1	100	96.652	Cercocebus_atys
ENSBTAG00000008472	CRNKL1	99	96.215	ENSCLAG00000013859	CRNKL1	100	96.215	Chinchilla_lanigera
ENSBTAG00000008472	CRNKL1	99	96.652	ENSCSAG00000011434	CRNKL1	100	96.652	Chlorocebus_sabaeus
ENSBTAG00000008472	CRNKL1	99	97.671	ENSCHOG00000006371	CRNKL1	84	97.671	Choloepus_hoffmanni
ENSBTAG00000008472	CRNKL1	99	93.431	ENSCPBG00000023501	CRNKL1	99	93.431	Chrysemys_picta_bellii
ENSBTAG00000008472	CRNKL1	96	69.789	ENSCING00000002709	-	99	68.328	Ciona_intestinalis
ENSBTAG00000008472	CRNKL1	99	96.652	ENSCANG00000038789	CRNKL1	100	96.652	Colobus_angolensis_palliatus
ENSBTAG00000008472	CRNKL1	99	96.802	ENSCGRG00001000687	-	99	96.802	Cricetulus_griseus_chok1gshd
ENSBTAG00000008472	CRNKL1	99	96.802	ENSCGRG00001001115	-	99	96.802	Cricetulus_griseus_chok1gshd
ENSBTAG00000008472	CRNKL1	99	96.802	ENSCGRG00000007854	Crnkl1	99	96.802	Cricetulus_griseus_crigri
ENSBTAG00000008472	CRNKL1	98	86.009	ENSCSEG00000005594	crnkl1	88	84.971	Cynoglossus_semilaevis
ENSBTAG00000008472	CRNKL1	96	87.688	ENSCVAG00000015172	crnkl1	93	85.072	Cyprinodon_variegatus
ENSBTAG00000008472	CRNKL1	96	87.160	ENSDARG00000007901	crnkl1	91	85.320	Danio_rerio
ENSBTAG00000008472	CRNKL1	99	97.956	ENSDNOG00000016226	CRNKL1	95	97.956	Dasypus_novemcinctus
ENSBTAG00000008472	CRNKL1	97	87.612	ENSDORG00000030174	-	99	87.612	Dipodomys_ordii
ENSBTAG00000008472	CRNKL1	97	88.060	ENSDORG00000023724	-	99	88.060	Dipodomys_ordii
ENSBTAG00000008472	CRNKL1	99	95.382	ENSDORG00000000394	-	100	95.382	Dipodomys_ordii
ENSBTAG00000008472	CRNKL1	95	69.670	FBgn0000377	crn	98	67.971	Drosophila_melanogaster
ENSBTAG00000008472	CRNKL1	99	84.716	ENSETEG00000003711	CRNKL1	84	84.716	Echinops_telfairi
ENSBTAG00000008472	CRNKL1	98	60.870	ENSEBUG00000013461	crnkl1	97	58.224	Eptatretus_burgeri
ENSBTAG00000008472	CRNKL1	99	98.830	ENSEASG00005002072	CRNKL1	99	98.830	Equus_asinus_asinus
ENSBTAG00000008472	CRNKL1	99	98.830	ENSECAG00000022215	CRNKL1	99	98.830	Equus_caballus
ENSBTAG00000008472	CRNKL1	99	95.051	ENSEEUG00000000413	CRNKL1	92	95.051	Erinaceus_europaeus
ENSBTAG00000008472	CRNKL1	96	86.377	ENSELUG00000015424	crnkl1	97	84.942	Esox_lucius
ENSBTAG00000008472	CRNKL1	99	98.399	ENSFCAG00000000714	CRNKL1	100	98.399	Felis_catus
ENSBTAG00000008472	CRNKL1	97	91.071	ENSFALG00000004611	CRNKL1	100	91.071	Ficedula_albicollis
ENSBTAG00000008472	CRNKL1	99	96.070	ENSFDAG00000000604	CRNKL1	100	96.070	Fukomys_damarensis
ENSBTAG00000008472	CRNKL1	99	85.965	ENSFHEG00000013163	crnkl1	89	85.486	Fundulus_heteroclitus
ENSBTAG00000008472	CRNKL1	96	86.228	ENSGMOG00000007609	crnkl1	94	84.840	Gadus_morhua
ENSBTAG00000008472	CRNKL1	99	92.993	ENSGALG00000008429	CRNKL1	99	92.993	Gallus_gallus
ENSBTAG00000008472	CRNKL1	96	87.237	ENSGAFG00000014249	crnkl1	90	85.526	Gambusia_affinis
ENSBTAG00000008472	CRNKL1	99	84.438	ENSGACG00000011852	crnkl1	93	84.438	Gasterosteus_aculeatus
ENSBTAG00000008472	CRNKL1	95	92.073	ENSGAGG00000021233	CRNKL1	100	92.199	Gopherus_agassizii
ENSBTAG00000008472	CRNKL1	99	96.361	ENSGGOG00000014176	CRNKL1	100	96.361	Gorilla_gorilla
ENSBTAG00000008472	CRNKL1	99	86.377	ENSHBUG00000005246	crnkl1	90	86.377	Haplochromis_burtoni
ENSBTAG00000008472	CRNKL1	99	96.361	ENSHGLG00000010856	CRNKL1	100	96.361	Heterocephalus_glaber_female
ENSBTAG00000008472	CRNKL1	99	96.361	ENSHGLG00100011521	CRNKL1	100	96.361	Heterocephalus_glaber_male
ENSBTAG00000008472	CRNKL1	99	83.188	ENSHCOG00000006420	crnkl1	99	83.043	Hippocampus_comes
ENSBTAG00000008472	CRNKL1	92	68.760	ENSIPUG00000000315	-	100	69.969	Ictalurus_punctatus
ENSBTAG00000008472	CRNKL1	98	75.073	ENSIPUG00000006836	-	99	75.073	Ictalurus_punctatus
ENSBTAG00000008472	CRNKL1	94	87.827	ENSIPUG00000006751	crnkl1	93	85.863	Ictalurus_punctatus
ENSBTAG00000008472	CRNKL1	99	97.671	ENSSTOG00000014747	CRNKL1	100	97.671	Ictidomys_tridecemlineatus
ENSBTAG00000008472	CRNKL1	99	95.164	ENSJJAG00000016926	Crnkl1	100	95.164	Jaculus_jaculus
ENSBTAG00000008472	CRNKL1	99	86.317	ENSKMAG00000003620	crnkl1	87	86.317	Kryptolebias_marmoratus
ENSBTAG00000008472	CRNKL1	96	71.025	ENSLBEG00000003543	crnkl1	93	70.563	Labrus_bergylta
ENSBTAG00000008472	CRNKL1	98	87.830	ENSLACG00000001129	CRNKL1	99	87.830	Latimeria_chalumnae
ENSBTAG00000008472	CRNKL1	96	89.458	ENSLOCG00000016889	crnkl1	96	87.083	Lepisosteus_oculatus
ENSBTAG00000008472	CRNKL1	99	97.820	ENSLAFG00000004512	CRNKL1	100	97.820	Loxodonta_africana
ENSBTAG00000008472	CRNKL1	99	96.652	ENSMFAG00000039893	CRNKL1	100	96.652	Macaca_fascicularis
ENSBTAG00000008472	CRNKL1	99	96.652	ENSMMUG00000007709	CRNKL1	100	96.652	Macaca_mulatta
ENSBTAG00000008472	CRNKL1	99	96.652	ENSMNEG00000037490	CRNKL1	100	96.652	Macaca_nemestrina
ENSBTAG00000008472	CRNKL1	99	96.652	ENSMLEG00000034885	CRNKL1	100	96.652	Mandrillus_leucophaeus
ENSBTAG00000008472	CRNKL1	99	85.345	ENSMAMG00000008757	crnkl1	92	85.345	Mastacembelus_armatus
ENSBTAG00000008472	CRNKL1	99	86.522	ENSMZEG00005022345	crnkl1	91	86.522	Maylandia_zebra
ENSBTAG00000008472	CRNKL1	99	92.274	ENSMGAG00000003452	CRNKL1	94	92.274	Meleagris_gallopavo
ENSBTAG00000008472	CRNKL1	99	96.657	ENSMAUG00000020764	Crnkl1	99	96.657	Mesocricetus_auratus
ENSBTAG00000008472	CRNKL1	99	97.089	ENSMICG00000006048	CRNKL1	100	97.089	Microcebus_murinus
ENSBTAG00000008472	CRNKL1	99	88.714	ENSMOCG00000000681	-	99	88.714	Microtus_ochrogaster
ENSBTAG00000008472	CRNKL1	96	69.369	ENSMOCG00000004179	-	96	69.585	Microtus_ochrogaster
ENSBTAG00000008472	CRNKL1	91	86.212	ENSMMOG00000017601	crnkl1	97	86.212	Mola_mola
ENSBTAG00000008472	CRNKL1	98	87.906	ENSMODG00000010857	-	98	87.906	Monodelphis_domestica
ENSBTAG00000008472	CRNKL1	99	92.385	ENSMODG00000005961	-	99	92.385	Monodelphis_domestica
ENSBTAG00000008472	CRNKL1	99	62.477	ENSMALG00000011211	crnkl1	92	62.607	Monopterus_albus
ENSBTAG00000008472	CRNKL1	99	96.802	MGP_CAROLIEiJ_G0024394	Crnkl1	99	96.802	Mus_caroli
ENSBTAG00000008472	CRNKL1	99	96.948	ENSMUSG00000001767	Crnkl1	99	96.948	Mus_musculus
ENSBTAG00000008472	CRNKL1	99	94.913	MGP_PahariEiJ_G0025838	Crnkl1	99	94.913	Mus_pahari
ENSBTAG00000008472	CRNKL1	99	96.802	MGP_SPRETEiJ_G0025312	Crnkl1	99	96.802	Mus_spretus
ENSBTAG00000008472	CRNKL1	99	98.253	ENSMPUG00000001226	CRNKL1	100	98.253	Mustela_putorius_furo
ENSBTAG00000008472	CRNKL1	99	97.384	ENSMLUG00000016513	CRNKL1	89	97.384	Myotis_lucifugus
ENSBTAG00000008472	CRNKL1	99	95.000	ENSNGAG00000023097	Crnkl1	100	95.000	Nannospalax_galili
ENSBTAG00000008472	CRNKL1	99	86.667	ENSNBRG00000007867	crnkl1	90	86.667	Neolamprologus_brichardi
ENSBTAG00000008472	CRNKL1	99	93.013	ENSNLEG00000009862	CRNKL1	100	93.013	Nomascus_leucogenys
ENSBTAG00000008472	CRNKL1	97	95.373	ENSMEUG00000012167	-	100	95.373	Notamacropus_eugenii
ENSBTAG00000008472	CRNKL1	99	86.277	ENSMEUG00000002361	-	99	86.277	Notamacropus_eugenii
ENSBTAG00000008472	CRNKL1	85	67.568	ENSOPRG00000009242	-	61	67.568	Ochotona_princeps
ENSBTAG00000008472	CRNKL1	99	96.070	ENSODEG00000012175	CRNKL1	100	96.070	Octodon_degus
ENSBTAG00000008472	CRNKL1	98	87.923	ENSONIG00000018728	crnkl1	89	88.053	Oreochromis_niloticus
ENSBTAG00000008472	CRNKL1	99	97.674	ENSOCUG00000015484	CRNKL1	83	97.674	Oryctolagus_cuniculus
ENSBTAG00000008472	CRNKL1	96	86.036	ENSORLG00000017240	crnkl1	94	82.318	Oryzias_latipes
ENSBTAG00000008472	CRNKL1	96	86.186	ENSORLG00020001742	crnkl1	89	86.186	Oryzias_latipes_hni
ENSBTAG00000008472	CRNKL1	96	86.186	ENSORLG00015019564	crnkl1	89	86.186	Oryzias_latipes_hsok
ENSBTAG00000008472	CRNKL1	98	85.337	ENSOMEG00000019895	crnkl1	91	85.337	Oryzias_melastigma
ENSBTAG00000008472	CRNKL1	99	97.234	ENSOGAG00000011544	CRNKL1	100	97.234	Otolemur_garnettii
ENSBTAG00000008472	CRNKL1	100	99.423	ENSOARG00000002150	CRNKL1	90	99.423	Ovis_aries
ENSBTAG00000008472	CRNKL1	98	95.147	ENSPPAG00000027847	CRNKL1	83	95.197	Pan_paniscus
ENSBTAG00000008472	CRNKL1	99	98.399	ENSPPRG00000001955	CRNKL1	100	98.399	Panthera_pardus
ENSBTAG00000008472	CRNKL1	99	98.399	ENSPTIG00000007393	CRNKL1	100	98.399	Panthera_tigris_altaica
ENSBTAG00000008472	CRNKL1	99	96.361	ENSPTRG00000030609	CRNKL1	100	96.361	Pan_troglodytes
ENSBTAG00000008472	CRNKL1	99	96.652	ENSPANG00000017420	CRNKL1	100	96.652	Papio_anubis
ENSBTAG00000008472	CRNKL1	96	82.563	ENSPKIG00000017093	crnkl1	90	81.069	Paramormyrops_kingsleyae
ENSBTAG00000008472	CRNKL1	99	92.240	ENSPSIG00000012705	CRNKL1	99	92.240	Pelodiscus_sinensis
ENSBTAG00000008472	CRNKL1	98	79.589	ENSPMGG00000006263	crnkl1	96	79.589	Periophthalmus_magnuspinnatus
ENSBTAG00000008472	CRNKL1	99	96.948	ENSPEMG00000000073	-	99	96.948	Peromyscus_maniculatus_bairdii
ENSBTAG00000008472	CRNKL1	99	82.122	ENSPMAG00000002250	crnkl1	99	82.122	Petromyzon_marinus
ENSBTAG00000008472	CRNKL1	99	95.051	ENSPCIG00000025825	CRNKL1	96	95.051	Phascolarctos_cinereus
ENSBTAG00000008472	CRNKL1	96	87.087	ENSPFOG00000005102	crnkl1	93	85.174	Poecilia_formosa
ENSBTAG00000008472	CRNKL1	96	87.087	ENSPLAG00000007288	crnkl1	90	85.051	Poecilia_latipinna
ENSBTAG00000008472	CRNKL1	96	87.237	ENSPMEG00000008865	crnkl1	93	85.320	Poecilia_mexicana
ENSBTAG00000008472	CRNKL1	96	86.787	ENSPREG00000012615	crnkl1	92	84.615	Poecilia_reticulata
ENSBTAG00000008472	CRNKL1	98	96.471	ENSPPYG00000010747	CRNKL1	81	96.507	Pongo_abelii
ENSBTAG00000008472	CRNKL1	99	91.994	ENSPCAG00000003296	CRNKL1	85	91.994	Procavia_capensis
ENSBTAG00000008472	CRNKL1	99	95.779	ENSPCOG00000017608	CRNKL1	83	95.779	Propithecus_coquereli
ENSBTAG00000008472	CRNKL1	99	98.253	ENSPVAG00000006207	CRNKL1	83	98.253	Pteropus_vampyrus
ENSBTAG00000008472	CRNKL1	99	86.377	ENSPNYG00000001977	crnkl1	90	86.377	Pundamilia_nyererei
ENSBTAG00000008472	CRNKL1	99	86.919	ENSPNAG00000001507	crnkl1	97	84.831	Pygocentrus_nattereri
ENSBTAG00000008472	CRNKL1	99	96.512	ENSRNOG00000040045	Crnkl1	99	96.512	Rattus_norvegicus
ENSBTAG00000008472	CRNKL1	99	96.948	ENSRNOG00000010587	Crnkl1	99	96.948	Rattus_norvegicus
ENSBTAG00000008472	CRNKL1	99	96.652	ENSRBIG00000031770	CRNKL1	100	96.652	Rhinopithecus_bieti
ENSBTAG00000008472	CRNKL1	99	96.507	ENSRROG00000040450	CRNKL1	100	96.507	Rhinopithecus_roxellana
ENSBTAG00000008472	CRNKL1	93	37.826	YLR117C	CLF1	99	37.916	Saccharomyces_cerevisiae
ENSBTAG00000008472	CRNKL1	99	96.652	ENSSBOG00000029672	CRNKL1	100	96.652	Saimiri_boliviensis_boliviensis
ENSBTAG00000008472	CRNKL1	95	74.962	ENSSHAG00000011199	CRNKL1	99	74.962	Sarcophilus_harrisii
ENSBTAG00000008472	CRNKL1	96	87.915	ENSSFOG00015000946	crnkl1	89	86.257	Scleropages_formosus
ENSBTAG00000008472	CRNKL1	98	85.174	ENSSMAG00000007933	crnkl1	89	84.660	Scophthalmus_maximus
ENSBTAG00000008472	CRNKL1	99	79.450	ENSSDUG00000012625	crnkl1	88	79.450	Seriola_dumerili
ENSBTAG00000008472	CRNKL1	99	86.087	ENSSLDG00000021413	crnkl1	89	86.087	Seriola_lalandi_dorsalis
ENSBTAG00000008472	CRNKL1	99	96.943	ENSSARG00000006443	CRNKL1	82	96.943	Sorex_araneus
ENSBTAG00000008472	CRNKL1	98	93.255	ENSSPUG00000005254	CRNKL1	99	93.255	Sphenodon_punctatus
ENSBTAG00000008472	CRNKL1	99	86.127	ENSSPAG00000016150	crnkl1	89	86.127	Stegastes_partitus
ENSBTAG00000008472	CRNKL1	99	98.699	ENSSSCG00000038587	CRNKL1	99	98.699	Sus_scrofa
ENSBTAG00000008472	CRNKL1	99	91.691	ENSTGUG00000007645	CRNKL1	98	91.691	Taeniopygia_guttata
ENSBTAG00000008472	CRNKL1	99	78.390	ENSTRUG00000015417	crnkl1	91	79.883	Takifugu_rubripes
ENSBTAG00000008472	CRNKL1	96	85.607	ENSTNIG00000010710	crnkl1	99	84.035	Tetraodon_nigroviridis
ENSBTAG00000008472	CRNKL1	91	96.994	ENSTBEG00000001304	CRNKL1	82	96.994	Tupaia_belangeri
ENSBTAG00000008472	CRNKL1	90	94.720	ENSTTRG00000000484	CRNKL1	81	94.778	Tursiops_truncatus
ENSBTAG00000008472	CRNKL1	99	98.399	ENSUAMG00000018586	CRNKL1	100	98.399	Ursus_americanus
ENSBTAG00000008472	CRNKL1	99	98.399	ENSUMAG00000024957	CRNKL1	100	98.399	Ursus_maritimus
ENSBTAG00000008472	CRNKL1	99	98.253	ENSVVUG00000012559	CRNKL1	82	98.253	Vulpes_vulpes
ENSBTAG00000008472	CRNKL1	99	90.393	ENSXETG00000009698	crnkl1	99	90.393	Xenopus_tropicalis
ENSBTAG00000008472	CRNKL1	96	86.357	ENSXCOG00000000824	crnkl1	92	84.448	Xiphophorus_couchianus
ENSBTAG00000008472	CRNKL1	96	87.237	ENSXMAG00000006896	crnkl1	92	85.298	Xiphophorus_maculatus