EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000008544 (Gene tree)
Gene ID: 514467
Gene Symbol: SALL1
Alias: -
Full Name: Bos taurus spalt like transcription factor 1 (SALL1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 14114 bases
Position: chr18:19546249-19560362
Accession: NM_001205790
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000011264	zf-C2H2	PF00096.26	5.4e-34	1	6
ENSBTAP00000011264	zf-C2H2	PF00096.26	5.4e-34	2	6
ENSBTAP00000011264	zf-C2H2	PF00096.26	5.4e-34	3	6
ENSBTAP00000011264	zf-C2H2	PF00096.26	5.4e-34	4	6
ENSBTAP00000011264	zf-C2H2	PF00096.26	5.4e-34	5	6
ENSBTAP00000011264	zf-C2H2	PF00096.26	5.4e-34	6	6
ENSBTAP00000011264	zf-met	PF12874.7	1.1e-24	1	5
ENSBTAP00000011264	zf-met	PF12874.7	1.1e-24	2	5
ENSBTAP00000011264	zf-met	PF12874.7	1.1e-24	3	5
ENSBTAP00000011264	zf-met	PF12874.7	1.1e-24	4	5
ENSBTAP00000011264	zf-met	PF12874.7	1.1e-24	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000011264	-	3951	-	ENSBTAP00000011264	1316 (aa)	XP_005218629	E1BIR3

Gene Model

Click here to download ENSBTAG00000008544's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000008544's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000008544	SALL1	56	36.667	ENSBTAG00000016721	-	94	45.098
ENSBTAG00000008544	SALL1	99	52.133	ENSBTAG00000050200	SALL3	99	65.306
ENSBTAG00000008544	SALL1	56	47.368	ENSBTAG00000038088	-	86	47.368
ENSBTAG00000008544	SALL1	98	59.615	ENSBTAG00000003101	SALL4	100	64.706

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000008544	SALL1	100	92.151	ENSG00000103449	SALL1	100	92.421	Homo_sapiens
ENSBTAG00000008544	SALL1	100	68.582	ENSAPOG00000022764	sall1a	99	68.280	Acanthochromis_polyacanthus
ENSBTAG00000008544	SALL1	100	92.401	ENSAMEG00000006817	SALL1	100	92.249	Ailuropoda_melanoleuca
ENSBTAG00000008544	SALL1	100	67.390	ENSACIG00000004231	sall1a	100	66.966	Amphilophus_citrinellus
ENSBTAG00000008544	SALL1	100	68.484	ENSAOCG00000002800	sall1a	99	68.182	Amphiprion_ocellaris
ENSBTAG00000008544	SALL1	100	68.484	ENSAPEG00000010179	sall1a	100	68.131	Amphiprion_percula
ENSBTAG00000008544	SALL1	100	67.910	ENSATEG00000003006	sall1a	100	67.846	Anabas_testudineus
ENSBTAG00000008544	SALL1	100	85.790	ENSAPLG00000003356	SALL1	99	85.779	Anas_platyrhynchos
ENSBTAG00000008544	SALL1	99	81.149	ENSACAG00000014399	SALL1	97	80.996	Anolis_carolinensis
ENSBTAG00000008544	SALL1	100	92.215	ENSANAG00000027238	SALL1	100	92.215	Aotus_nancymaae
ENSBTAG00000008544	SALL1	100	67.667	ENSACLG00000017148	sall1a	100	67.216	Astatotilapia_calliptera
ENSBTAG00000008544	SALL1	100	68.216	ENSAMXG00000018599	sall1a	99	67.592	Astyanax_mexicanus
ENSBTAG00000008544	SALL1	99	51.037	ENSAMXG00000017702	sall1b	99	51.522	Astyanax_mexicanus
ENSBTAG00000008544	SALL1	100	91.837	ENSCJAG00000001740	SALL1	100	92.139	Callithrix_jacchus
ENSBTAG00000008544	SALL1	100	92.296	ENSCAFG00000009755	SALL1	100	92.674	Canis_familiaris
ENSBTAG00000008544	SALL1	100	92.296	ENSCAFG00020002842	SALL1	100	92.674	Canis_lupus_dingo
ENSBTAG00000008544	SALL1	100	98.785	ENSCHIG00000026074	SALL1	100	98.785	Capra_hircus
ENSBTAG00000008544	SALL1	100	93.166	ENSTSYG00000029464	SALL1	100	92.792	Carlito_syrichta
ENSBTAG00000008544	SALL1	98	91.938	ENSCPOG00000006564	SALL1	100	91.628	Cavia_porcellus
ENSBTAG00000008544	SALL1	100	89.478	ENSCCAG00000001639	SALL1	100	89.478	Cebus_capucinus
ENSBTAG00000008544	SALL1	100	92.576	ENSCATG00000004982	SALL1	100	92.803	Cercocebus_atys
ENSBTAG00000008544	SALL1	100	92.477	ENSCLAG00000006380	SALL1	100	92.249	Chinchilla_lanigera
ENSBTAG00000008544	SALL1	100	91.377	ENSCSAG00000005319	SALL1	100	91.604	Chlorocebus_sabaeus
ENSBTAG00000008544	SALL1	66	93.281	ENSCHOG00000000800	-	69	93.281	Choloepus_hoffmanni
ENSBTAG00000008544	SALL1	100	85.714	ENSCPBG00000015924	SALL1	100	85.638	Chrysemys_picta_bellii
ENSBTAG00000008544	SALL1	100	92.646	ENSCANG00000036664	SALL1	100	93.284	Colobus_angolensis_palliatus
ENSBTAG00000008544	SALL1	100	89.629	ENSCGRG00001023314	-	100	89.318	Cricetulus_griseus_chok1gshd
ENSBTAG00000008544	SALL1	98	89.421	ENSCGRG00000009496	Sall1	100	89.104	Cricetulus_griseus_crigri
ENSBTAG00000008544	SALL1	100	66.245	ENSCSEG00000009349	sall1a	100	66.295	Cynoglossus_semilaevis
ENSBTAG00000008544	SALL1	90	66.443	ENSCVAG00000020513	sall1a	99	65.941	Cyprinodon_variegatus
ENSBTAG00000008544	SALL1	100	67.656	ENSDARG00000074319	sall1a	100	67.703	Danio_rerio
ENSBTAG00000008544	SALL1	99	47.129	ENSDARG00000075891	sall1b	99	47.006	Danio_rerio
ENSBTAG00000008544	SALL1	100	90.971	ENSDNOG00000016413	SALL1	100	90.819	Dasypus_novemcinctus
ENSBTAG00000008544	SALL1	98	91.395	ENSETEG00000015150	SALL1	100	90.698	Echinops_telfairi
ENSBTAG00000008544	SALL1	90	65.385	ENSEBUG00000011732	SALL1	97	65.385	Eptatretus_burgeri
ENSBTAG00000008544	SALL1	69	41.939	ENSEBUG00000008798	SALL1	68	42.748	Eptatretus_burgeri
ENSBTAG00000008544	SALL1	100	93.845	ENSEASG00005014602	SALL1	100	93.693	Equus_asinus_asinus
ENSBTAG00000008544	SALL1	91	91.275	ENSECAG00000011334	SALL1	99	91.443	Equus_caballus
ENSBTAG00000008544	SALL1	98	92.034	ENSEEUG00000002014	SALL1	100	91.725	Erinaceus_europaeus
ENSBTAG00000008544	SALL1	99	51.452	ENSELUG00000017774	-	99	50.261	Esox_lucius
ENSBTAG00000008544	SALL1	100	65.116	ENSELUG00000006159	sall1a	100	65.260	Esox_lucius
ENSBTAG00000008544	SALL1	100	91.964	ENSFCAG00000024654	SALL1	100	91.735	Felis_catus
ENSBTAG00000008544	SALL1	100	84.650	ENSFALG00000000074	SALL1	99	84.639	Ficedula_albicollis
ENSBTAG00000008544	SALL1	100	67.066	ENSFHEG00000012579	sall1a	100	66.692	Fundulus_heteroclitus
ENSBTAG00000008544	SALL1	79	63.462	ENSFHEG00000008424	-	99	61.538	Fundulus_heteroclitus
ENSBTAG00000008544	SALL1	97	41.821	ENSGMOG00000013383	-	88	46.324	Gadus_morhua
ENSBTAG00000008544	SALL1	100	66.145	ENSGMOG00000006103	sall1a	99	65.896	Gadus_morhua
ENSBTAG00000008544	SALL1	100	85.410	ENSGALG00000039238	SALL1	99	85.323	Gallus_gallus
ENSBTAG00000008544	SALL1	100	67.414	ENSGAFG00000009964	sall1a	100	67.263	Gambusia_affinis
ENSBTAG00000008544	SALL1	100	66.816	ENSGACG00000016702	sall1a	100	66.443	Gasterosteus_aculeatus
ENSBTAG00000008544	SALL1	100	85.334	ENSGAGG00000013979	SALL1	100	85.258	Gopherus_agassizii
ENSBTAG00000008544	SALL1	100	92.377	ENSGGOG00000000663	SALL1	100	92.377	Gorilla_gorilla
ENSBTAG00000008544	SALL1	100	67.667	ENSHBUG00000022005	sall1a	100	67.216	Haplochromis_burtoni
ENSBTAG00000008544	SALL1	100	92.021	ENSHGLG00000004288	-	100	91.641	Heterocephalus_glaber_female
ENSBTAG00000008544	SALL1	100	92.021	ENSHGLG00100017496	SALL1	100	91.641	Heterocephalus_glaber_male
ENSBTAG00000008544	SALL1	100	66.123	ENSHCOG00000000974	sall1a	99	65.433	Hippocampus_comes
ENSBTAG00000008544	SALL1	99	69.242	ENSIPUG00000016265	SALL1	99	68.342	Ictalurus_punctatus
ENSBTAG00000008544	SALL1	99	48.920	ENSIPUG00000022928	sall1b	99	48.399	Ictalurus_punctatus
ENSBTAG00000008544	SALL1	100	91.818	ENSSTOG00000020885	SALL1	100	91.275	Ictidomys_tridecemlineatus
ENSBTAG00000008544	SALL1	100	67.463	ENSKMAG00000016681	sall1a	100	67.064	Kryptolebias_marmoratus
ENSBTAG00000008544	SALL1	97	66.692	ENSLBEG00000012207	sall1a	95	66.258	Labrus_bergylta
ENSBTAG00000008544	SALL1	97	39.969	ENSLACG00000014018	-	93	40.980	Latimeria_chalumnae
ENSBTAG00000008544	SALL1	100	77.736	ENSLACG00000003556	SALL1	100	77.584	Latimeria_chalumnae
ENSBTAG00000008544	SALL1	100	72.971	ENSLOCG00000007283	sall1b	99	72.653	Lepisosteus_oculatus
ENSBTAG00000008544	SALL1	98	91.557	ENSLAFG00000015251	SALL1	100	90.473	Loxodonta_africana
ENSBTAG00000008544	SALL1	100	92.296	ENSMFAG00000003298	SALL1	100	92.598	Macaca_fascicularis
ENSBTAG00000008544	SALL1	93	92.577	ENSMMUG00000017200	SALL1	100	92.904	Macaca_mulatta
ENSBTAG00000008544	SALL1	93	92.502	ENSMNEG00000034770	SALL1	100	92.665	Macaca_nemestrina
ENSBTAG00000008544	SALL1	100	92.798	ENSMLEG00000036406	SALL1	100	93.366	Mandrillus_leucophaeus
ENSBTAG00000008544	SALL1	100	68.260	ENSMAMG00000004164	sall1a	100	68.010	Mastacembelus_armatus
ENSBTAG00000008544	SALL1	100	67.667	ENSMZEG00005006479	sall1a	100	67.216	Maylandia_zebra
ENSBTAG00000008544	SALL1	98	85.438	ENSMGAG00000004704	SALL1	99	85.349	Meleagris_gallopavo
ENSBTAG00000008544	SALL1	100	89.522	ENSMAUG00000019093	Sall1	100	89.142	Mesocricetus_auratus
ENSBTAG00000008544	SALL1	100	92.027	ENSMICG00000036486	SALL1	100	91.413	Microcebus_murinus
ENSBTAG00000008544	SALL1	100	67.687	ENSMMOG00000016400	sall1a	100	67.139	Mola_mola
ENSBTAG00000008544	SALL1	100	88.754	ENSMODG00000013114	SALL1	100	88.146	Monodelphis_domestica
ENSBTAG00000008544	SALL1	100	67.985	ENSMALG00000013400	sall1a	100	67.860	Monopterus_albus
ENSBTAG00000008544	SALL1	100	89.057	MGP_CAROLIEiJ_G0031362	Sall1	100	88.914	Mus_caroli
ENSBTAG00000008544	SALL1	100	88.839	ENSMUSG00000031665	Sall1	100	88.604	Mus_musculus
ENSBTAG00000008544	SALL1	100	88.395	MGP_PahariEiJ_G0022961	Sall1	100	88.311	Mus_pahari
ENSBTAG00000008544	SALL1	100	88.914	MGP_SPRETEiJ_G0032480	Sall1	100	88.679	Mus_spretus
ENSBTAG00000008544	SALL1	99	90.436	ENSMPUG00000003265	SALL1	97	90.192	Mustela_putorius_furo
ENSBTAG00000008544	SALL1	98	85.012	ENSMLUG00000015541	SALL1	100	85.319	Myotis_lucifugus
ENSBTAG00000008544	SALL1	100	67.742	ENSNBRG00000009307	sall1a	100	67.290	Neolamprologus_brichardi
ENSBTAG00000008544	SALL1	94	98.889	ENSNLEG00000001008	SALL1	100	98.889	Nomascus_leucogenys
ENSBTAG00000008544	SALL1	100	88.678	ENSMEUG00000012206	SALL1	100	87.614	Notamacropus_eugenii
ENSBTAG00000008544	SALL1	75	95.542	ENSOPRG00000005645	SALL1	72	95.542	Ochotona_princeps
ENSBTAG00000008544	SALL1	100	92.097	ENSODEG00000003685	SALL1	100	91.717	Octodon_degus
ENSBTAG00000008544	SALL1	100	67.967	ENSONIG00000002831	sall1a	100	67.515	Oreochromis_niloticus
ENSBTAG00000008544	SALL1	92	79.219	ENSOANG00000013399	SALL1	91	88.302	Ornithorhynchus_anatinus
ENSBTAG00000008544	SALL1	100	67.566	ENSORLG00000013827	sall1a	100	67.440	Oryzias_latipes
ENSBTAG00000008544	SALL1	100	67.566	ENSORLG00020020570	sall1a	100	67.440	Oryzias_latipes_hni
ENSBTAG00000008544	SALL1	100	67.362	ENSORLG00015018830	sall1a	100	67.386	Oryzias_latipes_hsok
ENSBTAG00000008544	SALL1	100	67.140	ENSOMEG00000016043	sall1a	100	66.866	Oryzias_melastigma
ENSBTAG00000008544	SALL1	100	92.576	ENSOGAG00000027316	SALL1	100	92.115	Otolemur_garnettii
ENSBTAG00000008544	SALL1	100	92.523	ENSOARG00000017583	SALL1	100	92.523	Ovis_aries
ENSBTAG00000008544	SALL1	100	68.389	ENSPPAG00000035136	-	99	69.606	Pan_paniscus
ENSBTAG00000008544	SALL1	99	91.692	ENSPPAG00000035657	SALL1	100	92.533	Pan_paniscus
ENSBTAG00000008544	SALL1	100	91.736	ENSPPRG00000023283	SALL1	100	91.489	Panthera_pardus
ENSBTAG00000008544	SALL1	83	95.810	ENSPTIG00000013539	-	96	95.810	Panthera_tigris_altaica
ENSBTAG00000008544	SALL1	100	92.511	ENSPTRG00000008108	SALL1	100	92.511	Pan_troglodytes
ENSBTAG00000008544	SALL1	96	70.016	ENSPTRG00000045256	-	98	70.142	Pan_troglodytes
ENSBTAG00000008544	SALL1	100	92.873	ENSPANG00000024176	SALL1	100	93.101	Papio_anubis
ENSBTAG00000008544	SALL1	100	65.758	ENSPKIG00000005383	-	100	65.606	Paramormyrops_kingsleyae
ENSBTAG00000008544	SALL1	100	66.015	ENSPKIG00000022251	sall1a	99	65.815	Paramormyrops_kingsleyae
ENSBTAG00000008544	SALL1	100	85.106	ENSPSIG00000008582	SALL1	100	84.954	Pelodiscus_sinensis
ENSBTAG00000008544	SALL1	100	64.853	ENSPMGG00000021788	sall1a	100	65.336	Periophthalmus_magnuspinnatus
ENSBTAG00000008544	SALL1	99	50.329	ENSPMAG00000008148	sall1b	99	51.195	Petromyzon_marinus
ENSBTAG00000008544	SALL1	100	88.982	ENSPCIG00000017840	SALL1	100	87.994	Phascolarctos_cinereus
ENSBTAG00000008544	SALL1	98	67.149	ENSPFOG00000015799	sall1a	96	66.920	Poecilia_formosa
ENSBTAG00000008544	SALL1	100	67.265	ENSPLAG00000022539	sall1a	100	67.040	Poecilia_latipinna
ENSBTAG00000008544	SALL1	100	67.339	ENSPMEG00000020894	sall1a	100	67.114	Poecilia_mexicana
ENSBTAG00000008544	SALL1	100	67.414	ENSPREG00000006802	sall1a	100	67.189	Poecilia_reticulata
ENSBTAG00000008544	SALL1	90	91.596	ENSPPYG00000007345	SALL1	96	91.935	Pongo_abelii
ENSBTAG00000008544	SALL1	84	97.561	ENSPCAG00000008162	SALL1	93	97.468	Procavia_capensis
ENSBTAG00000008544	SALL1	100	92.477	ENSPCOG00000028192	SALL1	100	92.097	Propithecus_coquereli
ENSBTAG00000008544	SALL1	67	91.589	ENSPVAG00000015374	SALL1	100	92.173	Pteropus_vampyrus
ENSBTAG00000008544	SALL1	100	67.742	ENSPNYG00000010865	sall1a	100	67.290	Pundamilia_nyererei
ENSBTAG00000008544	SALL1	70	63.462	ENSPNAG00000028248	-	68	63.462	Pygocentrus_nattereri
ENSBTAG00000008544	SALL1	100	66.542	ENSPNAG00000023644	sall1a	99	65.967	Pygocentrus_nattereri
ENSBTAG00000008544	SALL1	99	52.158	ENSPNAG00000007442	sall1b	99	52.932	Pygocentrus_nattereri
ENSBTAG00000008544	SALL1	100	88.855	ENSRNOG00000013907	Sall1	100	88.872	Rattus_norvegicus
ENSBTAG00000008544	SALL1	93	92.729	ENSRBIG00000015707	SALL1	100	92.974	Rhinopithecus_bieti
ENSBTAG00000008544	SALL1	99	91.527	ENSRROG00000035777	SALL1	100	92.816	Rhinopithecus_roxellana
ENSBTAG00000008544	SALL1	100	91.994	ENSSBOG00000032186	SALL1	100	92.069	Saimiri_boliviensis_boliviensis
ENSBTAG00000008544	SALL1	100	87.842	ENSSHAG00000009477	SALL1	100	87.006	Sarcophilus_harrisii
ENSBTAG00000008544	SALL1	100	66.617	ENSSFOG00015020020	sall1a	99	66.866	Scleropages_formosus
ENSBTAG00000008544	SALL1	98	66.743	ENSSFOG00015001590	sall1a	99	66.590	Scleropages_formosus
ENSBTAG00000008544	SALL1	100	68.185	ENSSMAG00000009160	sall1a	100	67.582	Scophthalmus_maximus
ENSBTAG00000008544	SALL1	100	68.433	ENSSDUG00000006507	sall1a	100	68.167	Seriola_dumerili
ENSBTAG00000008544	SALL1	90	59.184	ENSSDUG00000000748	sall1b	84	59.184	Seriola_dumerili
ENSBTAG00000008544	SALL1	100	68.507	ENSSLDG00000017721	sall1a	100	68.107	Seriola_lalandi_dorsalis
ENSBTAG00000008544	SALL1	98	91.886	ENSSARG00000000661	SALL1	100	91.654	Sorex_araneus
ENSBTAG00000008544	SALL1	100	85.182	ENSSPUG00000000156	SALL1	100	85.030	Sphenodon_punctatus
ENSBTAG00000008544	SALL1	100	68.284	ENSSPAG00000021615	sall1a	99	68.084	Stegastes_partitus
ENSBTAG00000008544	SALL1	100	92.992	ENSSSCG00000002836	SALL1	100	93.067	Sus_scrofa
ENSBTAG00000008544	SALL1	100	85.030	ENSTGUG00000007514	SALL1	99	84.943	Taeniopygia_guttata
ENSBTAG00000008544	SALL1	91	65.472	ENSTRUG00000008950	sall1a	100	65.391	Takifugu_rubripes
ENSBTAG00000008544	SALL1	92	64.558	ENSTNIG00000004257	sall1a	100	64.367	Tetraodon_nigroviridis
ENSBTAG00000008544	SALL1	73	100.000	ENSTBEG00000002119	-	55	100.000	Tupaia_belangeri
ENSBTAG00000008544	SALL1	90	91.830	ENSUAMG00000023379	-	92	91.830	Ursus_americanus
ENSBTAG00000008544	SALL1	90	91.117	ENSVVUG00000019383	-	99	91.624	Vulpes_vulpes
ENSBTAG00000008544	SALL1	100	75.793	ENSXETG00000018417	sall1	100	75.702	Xenopus_tropicalis
ENSBTAG00000008544	SALL1	94	35.201	ENSXETG00000017176	sall2	74	40.789	Xenopus_tropicalis
ENSBTAG00000008544	SALL1	100	67.265	ENSXMAG00000016273	sall1a	100	67.176	Xiphophorus_maculatus