EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000008617 (Gene tree)
Gene ID: 508491
Gene Symbol: CSTF3
Alias: -
Full Name: Bos taurus cleavage stimulation factor subunit 3 (CSTF3)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 67403 bases
Position: chr15:63722373-63789775
Accession: NM_001099700
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000060633	Suf	PF05843.14	1.9e-84	1	1
ENSBTAP00000011369	Suf	PF05843.14	3.6e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000087003	-	2517	-	ENSBTAP00000060633	674 (aa)	-	-
ENSBTAT00000011369	-	2154	-	ENSBTAP00000011369	717 (aa)	-	A5PJR5

Gene Model

Click here to download ENSBTAG00000008617's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000008617's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000008617	CSTF3	100	100.000	ENSG00000176102	CSTF3	100	100.000	Homo_sapiens
ENSBTAG00000008617	CSTF3	100	91.691	ENSAPOG00000014054	cstf3	100	91.365	Acanthochromis_polyacanthus
ENSBTAG00000008617	CSTF3	100	99.852	ENSAMEG00000007187	CSTF3	98	99.859	Ailuropoda_melanoleuca
ENSBTAG00000008617	CSTF3	93	86.080	ENSACIG00000005539	cstf3	100	86.080	Amphilophus_citrinellus
ENSBTAG00000008617	CSTF3	100	91.395	ENSAOCG00000010930	cstf3	100	91.086	Amphiprion_ocellaris
ENSBTAG00000008617	CSTF3	100	91.395	ENSAPEG00000007903	cstf3	100	91.086	Amphiprion_percula
ENSBTAG00000008617	CSTF3	100	91.691	ENSATEG00000000190	cstf3	100	91.226	Anabas_testudineus
ENSBTAG00000008617	CSTF3	100	97.923	ENSAPLG00000007217	CSTF3	100	98.023	Anas_platyrhynchos
ENSBTAG00000008617	CSTF3	100	96.142	ENSACAG00000002823	CSTF3	100	95.682	Anolis_carolinensis
ENSBTAG00000008617	CSTF3	100	100.000	ENSANAG00000020699	CSTF3	100	100.000	Aotus_nancymaae
ENSBTAG00000008617	CSTF3	100	91.543	ENSACLG00000007820	cstf3	100	91.086	Astatotilapia_calliptera
ENSBTAG00000008617	CSTF3	100	90.963	ENSAMXG00000014198	cstf3	100	90.947	Astyanax_mexicanus
ENSBTAG00000008617	CSTF3	99	49.430	WBGene00006307	suf-1	99	49.313	Caenorhabditis_elegans
ENSBTAG00000008617	CSTF3	100	100.000	ENSCJAG00000005533	CSTF3	100	100.000	Callithrix_jacchus
ENSBTAG00000008617	CSTF3	100	100.000	ENSCAFG00000007264	CSTF3	100	99.861	Canis_familiaris
ENSBTAG00000008617	CSTF3	100	100.000	ENSCAFG00020002715	CSTF3	99	100.000	Canis_lupus_dingo
ENSBTAG00000008617	CSTF3	100	98.368	ENSCHIG00000016418	CSTF3	100	100.000	Capra_hircus
ENSBTAG00000008617	CSTF3	100	99.555	ENSTSYG00000000451	CSTF3	100	99.577	Carlito_syrichta
ENSBTAG00000008617	CSTF3	89	96.591	ENSCAPG00000010958	CSTF3	98	96.591	Cavia_aperea
ENSBTAG00000008617	CSTF3	100	99.703	ENSCPOG00000005545	CSTF3	100	99.582	Cavia_porcellus
ENSBTAG00000008617	CSTF3	100	100.000	ENSCCAG00000024790	CSTF3	100	100.000	Cebus_capucinus
ENSBTAG00000008617	CSTF3	100	100.000	ENSCATG00000007080	CSTF3	100	100.000	Cercocebus_atys
ENSBTAG00000008617	CSTF3	100	100.000	ENSCLAG00000016179	CSTF3	100	100.000	Chinchilla_lanigera
ENSBTAG00000008617	CSTF3	78	100.000	ENSCHOG00000002497	CSTF3	79	100.000	Choloepus_hoffmanni
ENSBTAG00000008617	CSTF3	100	97.774	ENSCPBG00000006753	CSTF3	100	97.354	Chrysemys_picta_bellii
ENSBTAG00000008617	CSTF3	100	62.610	ENSCING00000006401	-	98	62.098	Ciona_intestinalis
ENSBTAG00000008617	CSTF3	100	62.190	ENSCSAVG00000004851	-	100	61.785	Ciona_savignyi
ENSBTAG00000008617	CSTF3	100	100.000	ENSCANG00000035468	CSTF3	100	100.000	Colobus_angolensis_palliatus
ENSBTAG00000008617	CSTF3	100	99.555	ENSCGRG00001014773	Cstf3	100	99.303	Cricetulus_griseus_chok1gshd
ENSBTAG00000008617	CSTF3	100	99.555	ENSCGRG00000004142	Cstf3	100	99.303	Cricetulus_griseus_crigri
ENSBTAG00000008617	CSTF3	100	91.395	ENSCSEG00000014283	cstf3	100	91.074	Cynoglossus_semilaevis
ENSBTAG00000008617	CSTF3	100	90.504	ENSCVAG00000019739	cstf3	100	90.251	Cyprinodon_variegatus
ENSBTAG00000008617	CSTF3	100	91.395	ENSDARG00000018904	cstf3	100	90.934	Danio_rerio
ENSBTAG00000008617	CSTF3	100	99.555	ENSDNOG00000007366	CSTF3	99	99.020	Dasypus_novemcinctus
ENSBTAG00000008617	CSTF3	100	91.704	ENSDORG00000005898	Cstf3	99	92.102	Dipodomys_ordii
ENSBTAG00000008617	CSTF3	99	57.637	FBgn0003559	su(f)	98	57.025	Drosophila_melanogaster
ENSBTAG00000008617	CSTF3	95	94.237	ENSETEG00000017097	CSTF3	90	94.237	Echinops_telfairi
ENSBTAG00000008617	CSTF3	87	73.980	ENSEBUG00000015459	cstf3	96	74.050	Eptatretus_burgeri
ENSBTAG00000008617	CSTF3	100	99.852	ENSEASG00005019884	CSTF3	100	99.857	Equus_asinus_asinus
ENSBTAG00000008617	CSTF3	100	99.852	ENSECAG00000023338	CSTF3	100	99.857	Equus_caballus
ENSBTAG00000008617	CSTF3	100	94.142	ENSEEUG00000015167	CSTF3	100	94.142	Erinaceus_europaeus
ENSBTAG00000008617	CSTF3	100	90.059	ENSELUG00000023393	cstf3	100	89.679	Esox_lucius
ENSBTAG00000008617	CSTF3	100	99.852	ENSFCAG00000030711	CSTF3	100	99.721	Felis_catus
ENSBTAG00000008617	CSTF3	97	96.928	ENSFALG00000010764	CSTF3	100	96.928	Ficedula_albicollis
ENSBTAG00000008617	CSTF3	100	99.861	ENSFDAG00000012082	CSTF3	100	99.861	Fukomys_damarensis
ENSBTAG00000008617	CSTF3	100	90.653	ENSFHEG00000020623	cstf3	100	90.390	Fundulus_heteroclitus
ENSBTAG00000008617	CSTF3	100	89.778	ENSGMOG00000012275	cstf3	100	89.430	Gadus_morhua
ENSBTAG00000008617	CSTF3	100	98.368	ENSGALG00000011685	CSTF3	100	98.050	Gallus_gallus
ENSBTAG00000008617	CSTF3	100	90.950	ENSGAFG00000002181	cstf3	100	90.669	Gambusia_affinis
ENSBTAG00000008617	CSTF3	100	90.950	ENSGACG00000015997	cstf3	100	90.529	Gasterosteus_aculeatus
ENSBTAG00000008617	CSTF3	100	97.774	ENSGAGG00000006200	CSTF3	100	97.214	Gopherus_agassizii
ENSBTAG00000008617	CSTF3	100	93.769	ENSGGOG00000026591	CSTF3	99	94.076	Gorilla_gorilla
ENSBTAG00000008617	CSTF3	100	91.543	ENSHBUG00000016656	cstf3	100	91.086	Haplochromis_burtoni
ENSBTAG00000008617	CSTF3	100	99.721	ENSHGLG00000017834	CSTF3	100	99.721	Heterocephalus_glaber_female
ENSBTAG00000008617	CSTF3	100	99.721	ENSHGLG00100018042	CSTF3	100	99.721	Heterocephalus_glaber_male
ENSBTAG00000008617	CSTF3	100	88.872	ENSHCOG00000015218	cstf3	100	88.858	Hippocampus_comes
ENSBTAG00000008617	CSTF3	100	90.653	ENSIPUG00000013170	CSTF3	100	90.237	Ictalurus_punctatus
ENSBTAG00000008617	CSTF3	100	100.000	ENSSTOG00000013306	CSTF3	100	100.000	Ictidomys_tridecemlineatus
ENSBTAG00000008617	CSTF3	100	87.537	ENSJJAG00000018430	Cstf3	99	87.448	Jaculus_jaculus
ENSBTAG00000008617	CSTF3	100	90.504	ENSKMAG00000010916	cstf3	100	89.833	Kryptolebias_marmoratus
ENSBTAG00000008617	CSTF3	100	90.504	ENSLBEG00000002306	cstf3	100	90.111	Labrus_bergylta
ENSBTAG00000008617	CSTF3	100	94.214	ENSLACG00000017296	CSTF3	100	93.863	Latimeria_chalumnae
ENSBTAG00000008617	CSTF3	100	93.472	ENSLOCG00000004415	cstf3	100	93.305	Lepisosteus_oculatus
ENSBTAG00000008617	CSTF3	100	99.703	ENSLAFG00000008712	CSTF3	100	99.582	Loxodonta_africana
ENSBTAG00000008617	CSTF3	100	100.000	ENSMFAG00000029516	CSTF3	100	100.000	Macaca_fascicularis
ENSBTAG00000008617	CSTF3	100	100.000	ENSMMUG00000002542	CSTF3	100	100.000	Macaca_mulatta
ENSBTAG00000008617	CSTF3	100	100.000	ENSMNEG00000021807	CSTF3	100	100.000	Macaca_nemestrina
ENSBTAG00000008617	CSTF3	100	100.000	ENSMLEG00000039594	CSTF3	100	100.000	Mandrillus_leucophaeus
ENSBTAG00000008617	CSTF3	100	91.395	ENSMAMG00000020423	cstf3	100	91.086	Mastacembelus_armatus
ENSBTAG00000008617	CSTF3	100	91.543	ENSMZEG00005012082	cstf3	100	91.086	Maylandia_zebra
ENSBTAG00000008617	CSTF3	100	98.368	ENSMGAG00000001383	CSTF3	100	98.189	Meleagris_gallopavo
ENSBTAG00000008617	CSTF3	100	99.407	ENSMAUG00000002487	Cstf3	100	99.163	Mesocricetus_auratus
ENSBTAG00000008617	CSTF3	100	99.721	ENSMICG00000004784	CSTF3	100	99.721	Microcebus_murinus
ENSBTAG00000008617	CSTF3	100	99.555	ENSMOCG00000017583	Cstf3	100	99.303	Microtus_ochrogaster
ENSBTAG00000008617	CSTF3	100	91.098	ENSMMOG00000016026	cstf3	95	91.127	Mola_mola
ENSBTAG00000008617	CSTF3	100	84.570	ENSMODG00000025205	-	100	84.100	Monodelphis_domestica
ENSBTAG00000008617	CSTF3	100	98.813	ENSMODG00000009745	-	100	98.745	Monodelphis_domestica
ENSBTAG00000008617	CSTF3	100	91.098	ENSMALG00000012050	cstf3	100	90.808	Monopterus_albus
ENSBTAG00000008617	CSTF3	100	99.555	MGP_CAROLIEiJ_G0024026	Cstf3	100	99.303	Mus_caroli
ENSBTAG00000008617	CSTF3	100	99.555	ENSMUSG00000027176	Cstf3	100	99.303	Mus_musculus
ENSBTAG00000008617	CSTF3	100	99.555	MGP_PahariEiJ_G0025464	Cstf3	100	99.303	Mus_pahari
ENSBTAG00000008617	CSTF3	100	99.555	MGP_SPRETEiJ_G0024939	Cstf3	100	99.303	Mus_spretus
ENSBTAG00000008617	CSTF3	100	99.852	ENSMPUG00000011457	CSTF3	100	99.721	Mustela_putorius_furo
ENSBTAG00000008617	CSTF3	100	99.703	ENSMLUG00000003073	-	99	99.437	Myotis_lucifugus
ENSBTAG00000008617	CSTF3	100	96.588	ENSMLUG00000026022	-	100	96.095	Myotis_lucifugus
ENSBTAG00000008617	CSTF3	100	99.555	ENSNGAG00000010677	Cstf3	100	99.303	Nannospalax_galili
ENSBTAG00000008617	CSTF3	93	91.040	ENSNBRG00000007345	cstf3	100	91.040	Neolamprologus_brichardi
ENSBTAG00000008617	CSTF3	100	100.000	ENSNLEG00000017901	CSTF3	100	100.000	Nomascus_leucogenys
ENSBTAG00000008617	CSTF3	78	95.029	ENSMEUG00000005640	-	100	95.029	Notamacropus_eugenii
ENSBTAG00000008617	CSTF3	65	100.000	ENSOPRG00000000199	-	67	97.333	Ochotona_princeps
ENSBTAG00000008617	CSTF3	94	87.107	ENSODEG00000006311	-	97	87.107	Octodon_degus
ENSBTAG00000008617	CSTF3	100	99.852	ENSODEG00000016737	-	100	99.721	Octodon_degus
ENSBTAG00000008617	CSTF3	100	91.543	ENSONIG00000005563	cstf3	100	91.086	Oreochromis_niloticus
ENSBTAG00000008617	CSTF3	96	97.077	ENSOANG00000015140	CSTF3	100	97.077	Ornithorhynchus_anatinus
ENSBTAG00000008617	CSTF3	100	99.703	ENSOCUG00000015417	CSTF3	100	99.582	Oryctolagus_cuniculus
ENSBTAG00000008617	CSTF3	100	91.098	ENSORLG00000009762	cstf3	100	90.934	Oryzias_latipes
ENSBTAG00000008617	CSTF3	100	91.098	ENSORLG00020005540	cstf3	100	90.934	Oryzias_latipes_hni
ENSBTAG00000008617	CSTF3	100	90.950	ENSORLG00015003551	cstf3	100	90.795	Oryzias_latipes_hsok
ENSBTAG00000008617	CSTF3	100	90.504	ENSOMEG00000003848	cstf3	100	90.098	Oryzias_melastigma
ENSBTAG00000008617	CSTF3	100	99.409	ENSOGAG00000010229	CSTF3	100	99.306	Otolemur_garnettii
ENSBTAG00000008617	CSTF3	95	99.844	ENSOARG00000017271	CSTF3	99	99.844	Ovis_aries
ENSBTAG00000008617	CSTF3	100	96.142	ENSPPAG00000027358	CSTF3	99	96.333	Pan_paniscus
ENSBTAG00000008617	CSTF3	100	99.852	ENSPPRG00000016852	CSTF3	100	99.721	Panthera_pardus
ENSBTAG00000008617	CSTF3	100	99.852	ENSPTIG00000008716	CSTF3	100	99.721	Panthera_tigris_altaica
ENSBTAG00000008617	CSTF3	100	100.000	ENSPTRG00000003485	CSTF3	100	100.000	Pan_troglodytes
ENSBTAG00000008617	CSTF3	100	100.000	ENSPANG00000013722	CSTF3	100	100.000	Papio_anubis
ENSBTAG00000008617	CSTF3	100	92.730	ENSPKIG00000023648	cstf3	100	92.469	Paramormyrops_kingsleyae
ENSBTAG00000008617	CSTF3	100	97.329	ENSPSIG00000009173	CSTF3	100	96.936	Pelodiscus_sinensis
ENSBTAG00000008617	CSTF3	76	94.698	ENSPMGG00000000164	cstf3	99	94.698	Periophthalmus_magnuspinnatus
ENSBTAG00000008617	CSTF3	100	99.407	ENSPEMG00000011481	Cstf3	100	99.163	Peromyscus_maniculatus_bairdii
ENSBTAG00000008617	CSTF3	100	80.383	ENSPMAG00000007282	cstf3	99	80.337	Petromyzon_marinus
ENSBTAG00000008617	CSTF3	100	81.481	ENSPCIG00000030419	-	90	81.894	Phascolarctos_cinereus
ENSBTAG00000008617	CSTF3	100	95.852	ENSPCIG00000026406	-	100	98.240	Phascolarctos_cinereus
ENSBTAG00000008617	CSTF3	100	91.098	ENSPFOG00000017239	cstf3	100	90.808	Poecilia_formosa
ENSBTAG00000008617	CSTF3	100	91.098	ENSPLAG00000009456	cstf3	100	90.808	Poecilia_latipinna
ENSBTAG00000008617	CSTF3	100	91.098	ENSPMEG00000010320	cstf3	100	90.808	Poecilia_mexicana
ENSBTAG00000008617	CSTF3	100	91.098	ENSPREG00000013549	cstf3	100	90.808	Poecilia_reticulata
ENSBTAG00000008617	CSTF3	100	100.000	ENSPPYG00000003375	CSTF3	100	100.000	Pongo_abelii
ENSBTAG00000008617	CSTF3	71	100.000	ENSPCAG00000008025	-	71	100.000	Procavia_capensis
ENSBTAG00000008617	CSTF3	100	94.561	ENSPCOG00000014417	CSTF3	100	94.561	Propithecus_coquereli
ENSBTAG00000008617	CSTF3	100	94.561	ENSPVAG00000002350	CSTF3	100	94.561	Pteropus_vampyrus
ENSBTAG00000008617	CSTF3	100	91.543	ENSPNYG00000018259	cstf3	100	91.086	Pundamilia_nyererei
ENSBTAG00000008617	CSTF3	100	92.433	ENSPNAG00000020182	cstf3	100	92.050	Pygocentrus_nattereri
ENSBTAG00000008617	CSTF3	93	99.200	ENSRNOG00000012089	Cstf3	100	99.200	Rattus_norvegicus
ENSBTAG00000008617	CSTF3	100	98.516	ENSRBIG00000044258	CSTF3	100	100.000	Rhinopithecus_bieti
ENSBTAG00000008617	CSTF3	100	100.000	ENSRROG00000043450	CSTF3	100	100.000	Rhinopithecus_roxellana
ENSBTAG00000008617	CSTF3	100	100.000	ENSSBOG00000024764	CSTF3	100	100.000	Saimiri_boliviensis_boliviensis
ENSBTAG00000008617	CSTF3	100	98.665	ENSSHAG00000018128	-	100	97.908	Sarcophilus_harrisii
ENSBTAG00000008617	CSTF3	100	85.608	ENSSHAG00000003135	-	99	85.495	Sarcophilus_harrisii
ENSBTAG00000008617	CSTF3	100	92.582	ENSSFOG00015022133	cstf3	100	92.190	Scleropages_formosus
ENSBTAG00000008617	CSTF3	100	90.801	ENSSMAG00000002197	cstf3	100	90.251	Scophthalmus_maximus
ENSBTAG00000008617	CSTF3	100	91.543	ENSSDUG00000020426	cstf3	100	91.086	Seriola_dumerili
ENSBTAG00000008617	CSTF3	100	91.543	ENSSLDG00000025649	cstf3	100	91.226	Seriola_lalandi_dorsalis
ENSBTAG00000008617	CSTF3	100	99.582	ENSSARG00000000391	CSTF3	100	99.582	Sorex_araneus
ENSBTAG00000008617	CSTF3	100	97.033	ENSSPUG00000010546	CSTF3	100	97.106	Sphenodon_punctatus
ENSBTAG00000008617	CSTF3	100	91.543	ENSSPAG00000004958	cstf3	100	91.226	Stegastes_partitus
ENSBTAG00000008617	CSTF3	100	99.852	ENSSSCG00000040954	CSTF3	100	99.302	Sus_scrofa
ENSBTAG00000008617	CSTF3	100	97.774	ENSTGUG00000005010	CSTF3	100	97.740	Taeniopygia_guttata
ENSBTAG00000008617	CSTF3	100	90.356	ENSTRUG00000004959	cstf3	100	89.833	Takifugu_rubripes
ENSBTAG00000008617	CSTF3	100	90.801	ENSTNIG00000013811	cstf3	99	90.704	Tetraodon_nigroviridis
ENSBTAG00000008617	CSTF3	95	96.417	ENSTBEG00000001544	CSTF3	90	96.417	Tupaia_belangeri
ENSBTAG00000008617	CSTF3	100	96.932	ENSTTRG00000016366	CSTF3	100	96.932	Tursiops_truncatus
ENSBTAG00000008617	CSTF3	100	99.703	ENSUMAG00000018971	CSTF3	100	99.680	Ursus_maritimus
ENSBTAG00000008617	CSTF3	100	99.861	ENSVPAG00000007800	CSTF3	100	99.861	Vicugna_pacos
ENSBTAG00000008617	CSTF3	100	100.000	ENSVVUG00000014938	CSTF3	100	100.000	Vulpes_vulpes
ENSBTAG00000008617	CSTF3	66	43.595	ENSXETG00000017946	-	99	43.595	Xenopus_tropicalis
ENSBTAG00000008617	CSTF3	94	79.375	ENSXETG00000021399	cstf3	100	80.583	Xenopus_tropicalis
ENSBTAG00000008617	CSTF3	93	90.400	ENSXCOG00000011741	cstf3	100	90.400	Xiphophorus_couchianus
ENSBTAG00000008617	CSTF3	100	91.098	ENSXMAG00000009545	cstf3	100	90.808	Xiphophorus_maculatus