EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000008642 (Gene tree)
Gene ID: 539061
Gene Symbol: POLR1D
Alias: -
Full Name: Bos taurus RNA polymerase I and III subunit D (POLR1D)%2C transcript variant 2%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 1695 bases
Position: chr12:32319707-32321401
Accession: NM_001076144
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000044471	RNA_pol_L_2	PF13656.6	1.9e-28	1	1
ENSBTAP00000044471	RNA_pol_L	PF01193.24	5.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000047251	-	775	-	ENSBTAP00000044471	133 (aa)	-	Q1RMG8

Gene Model

Click here to download ENSBTAG00000008642's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03020	RNA polymerase	KEGG
bta04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000008642's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000008642	POLR1D	77	33.981	ENSBTAG00000005446	POLR2J	85	33.981
ENSBTAG00000008642	POLR1D	100	100.000	ENSBTAG00000033252	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000008642	POLR1D	100	94.737	ENSG00000186184	POLR1D	100	95.690	Homo_sapiens
ENSBTAG00000008642	POLR1D	83	67.568	ENSAPOG00000021882	polr1d	98	67.568	Acanthochromis_polyacanthus
ENSBTAG00000008642	POLR1D	94	96.000	ENSAMEG00000019095	POLR1D	100	96.000	Ailuropoda_melanoleuca
ENSBTAG00000008642	POLR1D	80	70.370	ENSACIG00000013328	polr1d	94	70.370	Amphilophus_citrinellus
ENSBTAG00000008642	POLR1D	84	66.964	ENSAOCG00000018500	polr1d	98	66.964	Amphiprion_ocellaris
ENSBTAG00000008642	POLR1D	84	66.071	ENSAPEG00000009489	polr1d	98	66.071	Amphiprion_percula
ENSBTAG00000008642	POLR1D	80	66.355	ENSATEG00000019322	polr1d	94	66.355	Anabas_testudineus
ENSBTAG00000008642	POLR1D	83	65.766	ENSACAG00000015753	POLR1D	96	65.766	Anolis_carolinensis
ENSBTAG00000008642	POLR1D	100	95.489	ENSANAG00000024486	POLR1D	100	95.489	Aotus_nancymaae
ENSBTAG00000008642	POLR1D	80	70.093	ENSACLG00000023805	polr1d	94	70.093	Astatotilapia_calliptera
ENSBTAG00000008642	POLR1D	80	69.811	ENSAMXG00000036118	polr1d	92	69.811	Astyanax_mexicanus
ENSBTAG00000008642	POLR1D	62	37.805	WBGene00010230	rpac-19	57	37.805	Caenorhabditis_elegans
ENSBTAG00000008642	POLR1D	100	94.737	ENSCJAG00000044669	POLR1D	100	94.737	Callithrix_jacchus
ENSBTAG00000008642	POLR1D	100	96.241	ENSCAFG00000006755	POLR1D	100	96.241	Canis_familiaris
ENSBTAG00000008642	POLR1D	100	98.496	ENSCHIG00000021910	POLR1D	100	98.496	Capra_hircus
ENSBTAG00000008642	POLR1D	93	91.935	ENSTSYG00000026817	-	93	91.935	Carlito_syrichta
ENSBTAG00000008642	POLR1D	96	80.000	ENSTSYG00000034852	-	98	80.672	Carlito_syrichta
ENSBTAG00000008642	POLR1D	96	53.906	ENSCAPG00000006058	-	99	53.906	Cavia_aperea
ENSBTAG00000008642	POLR1D	96	54.688	ENSCPOG00000030450	-	99	54.688	Cavia_porcellus
ENSBTAG00000008642	POLR1D	100	76.692	ENSCCAG00000020191	-	100	76.692	Cebus_capucinus
ENSBTAG00000008642	POLR1D	100	93.985	ENSCCAG00000021349	-	100	93.985	Cebus_capucinus
ENSBTAG00000008642	POLR1D	100	93.233	ENSCATG00000030710	-	100	93.233	Cercocebus_atys
ENSBTAG00000008642	POLR1D	100	82.707	ENSCATG00000022900	-	100	82.707	Cercocebus_atys
ENSBTAG00000008642	POLR1D	93	93.548	ENSCLAG00000017623	POLR1D	100	93.548	Chinchilla_lanigera
ENSBTAG00000008642	POLR1D	73	78.351	ENSCPBG00000004719	POLR1D	96	78.351	Chrysemys_picta_bellii
ENSBTAG00000008642	POLR1D	100	93.233	ENSCANG00000028632	-	100	93.233	Colobus_angolensis_palliatus
ENSBTAG00000008642	POLR1D	100	90.226	ENSCANG00000037694	-	100	90.226	Colobus_angolensis_palliatus
ENSBTAG00000008642	POLR1D	100	93.985	ENSCGRG00001021251	Polr1d	100	93.985	Cricetulus_griseus_chok1gshd
ENSBTAG00000008642	POLR1D	100	93.985	ENSCGRG00000011639	Polr1d	100	93.985	Cricetulus_griseus_crigri
ENSBTAG00000008642	POLR1D	78	69.231	ENSCSEG00000018268	polr1d	91	68.224	Cynoglossus_semilaevis
ENSBTAG00000008642	POLR1D	79	73.333	ENSCVAG00000018527	polr1d	92	73.333	Cyprinodon_variegatus
ENSBTAG00000008642	POLR1D	83	66.364	ENSDARG00000037570	polr1d	98	66.364	Danio_rerio
ENSBTAG00000008642	POLR1D	100	91.729	ENSDNOG00000043676	-	100	91.729	Dasypus_novemcinctus
ENSBTAG00000008642	POLR1D	100	89.552	ENSDNOG00000046247	-	100	89.552	Dasypus_novemcinctus
ENSBTAG00000008642	POLR1D	100	93.233	ENSDORG00000029155	Polr1d	100	93.233	Dipodomys_ordii
ENSBTAG00000008642	POLR1D	65	45.349	FBgn0086447	l(2)37Cg	81	45.349	Drosophila_melanogaster
ENSBTAG00000008642	POLR1D	93	87.903	ENSETEG00000012797	POLR1D	100	87.903	Echinops_telfairi
ENSBTAG00000008642	POLR1D	65	70.115	ENSEBUG00000011748	polr1d	61	70.115	Eptatretus_burgeri
ENSBTAG00000008642	POLR1D	96	94.531	ENSEASG00005022487	POLR1D	99	94.531	Equus_asinus_asinus
ENSBTAG00000008642	POLR1D	93	95.968	ENSEEUG00000013144	POLR1D	100	95.968	Erinaceus_europaeus
ENSBTAG00000008642	POLR1D	86	67.544	ENSELUG00000005105	rpac2	96	67.544	Esox_lucius
ENSBTAG00000008642	POLR1D	100	94.737	ENSFCAG00000030162	POLR1D	100	94.737	Felis_catus
ENSBTAG00000008642	POLR1D	72	78.125	ENSFALG00000011463	POLR1D	95	78.125	Ficedula_albicollis
ENSBTAG00000008642	POLR1D	100	92.481	ENSFDAG00000004463	POLR1D	100	92.481	Fukomys_damarensis
ENSBTAG00000008642	POLR1D	80	73.148	ENSFHEG00000015410	polr1d	94	73.148	Fundulus_heteroclitus
ENSBTAG00000008642	POLR1D	83	69.643	ENSGAFG00000001693	polr1d	92	73.333	Gambusia_affinis
ENSBTAG00000008642	POLR1D	88	66.949	ENSGACG00000018585	polr1d	100	66.949	Gasterosteus_aculeatus
ENSBTAG00000008642	POLR1D	80	79.245	ENSGAGG00000008503	POLR1D	93	79.245	Gopherus_agassizii
ENSBTAG00000008642	POLR1D	100	94.737	ENSGGOG00000004235	POLR1D	100	94.737	Gorilla_gorilla
ENSBTAG00000008642	POLR1D	80	70.093	ENSHBUG00000002111	polr1d	94	70.093	Haplochromis_burtoni
ENSBTAG00000008642	POLR1D	100	92.481	ENSHGLG00000003202	POLR1D	100	92.481	Heterocephalus_glaber_female
ENSBTAG00000008642	POLR1D	100	92.481	ENSHGLG00100009393	POLR1D	100	92.481	Heterocephalus_glaber_male
ENSBTAG00000008642	POLR1D	80	68.224	ENSHCOG00000003258	polr1d	94	68.224	Hippocampus_comes
ENSBTAG00000008642	POLR1D	87	66.379	ENSIPUG00000014810	polr1d	97	66.379	Ictalurus_punctatus
ENSBTAG00000008642	POLR1D	100	95.489	ENSSTOG00000013877	POLR1D	100	95.489	Ictidomys_tridecemlineatus
ENSBTAG00000008642	POLR1D	95	73.016	ENSJJAG00000021667	-	75	73.016	Jaculus_jaculus
ENSBTAG00000008642	POLR1D	97	87.218	ENSJJAG00000022671	-	100	90.833	Jaculus_jaculus
ENSBTAG00000008642	POLR1D	80	67.925	ENSKMAG00000015256	polr1d	93	67.925	Kryptolebias_marmoratus
ENSBTAG00000008642	POLR1D	79	71.429	ENSLBEG00000015919	polr1d	92	71.429	Labrus_bergylta
ENSBTAG00000008642	POLR1D	87	65.517	ENSLACG00000006810	POLR1D	96	65.517	Latimeria_chalumnae
ENSBTAG00000008642	POLR1D	54	77.027	ENSLOCG00000014976	polr1d	100	77.027	Lepisosteus_oculatus
ENSBTAG00000008642	POLR1D	100	87.218	ENSLAFG00000032290	POLR1D	100	87.218	Loxodonta_africana
ENSBTAG00000008642	POLR1D	94	92.800	ENSMFAG00000045264	POLR1D	97	92.800	Macaca_fascicularis
ENSBTAG00000008642	POLR1D	87	94.828	ENSMMUG00000020386	POLR1D	100	94.828	Macaca_mulatta
ENSBTAG00000008642	POLR1D	100	74.436	ENSMMUG00000041570	-	100	74.436	Macaca_mulatta
ENSBTAG00000008642	POLR1D	100	77.444	ENSMNEG00000038120	-	100	77.444	Macaca_nemestrina
ENSBTAG00000008642	POLR1D	100	93.985	ENSMNEG00000008630	-	100	93.985	Macaca_nemestrina
ENSBTAG00000008642	POLR1D	100	83.459	ENSMLEG00000032251	-	100	83.459	Mandrillus_leucophaeus
ENSBTAG00000008642	POLR1D	100	93.985	ENSMLEG00000041048	-	100	93.985	Mandrillus_leucophaeus
ENSBTAG00000008642	POLR1D	76	69.307	ENSMAMG00000014834	polr1d	94	69.307	Mastacembelus_armatus
ENSBTAG00000008642	POLR1D	75	73.000	ENSMZEG00005006638	polr1d	88	73.000	Maylandia_zebra
ENSBTAG00000008642	POLR1D	80	69.725	ENSMGAG00000005322	POLR1D	100	69.725	Meleagris_gallopavo
ENSBTAG00000008642	POLR1D	100	93.985	ENSMAUG00000001946	Polr1d	100	93.985	Mesocricetus_auratus
ENSBTAG00000008642	POLR1D	99	77.273	ENSMICG00000007349	-	100	77.273	Microcebus_murinus
ENSBTAG00000008642	POLR1D	100	94.737	ENSMICG00000016883	-	100	94.737	Microcebus_murinus
ENSBTAG00000008642	POLR1D	99	91.667	ENSMOCG00000021288	Polr1d	99	91.667	Microtus_ochrogaster
ENSBTAG00000008642	POLR1D	80	69.159	ENSMMOG00000009605	polr1d	94	69.159	Mola_mola
ENSBTAG00000008642	POLR1D	80	83.019	ENSMODG00000023881	POLR1D	93	83.019	Monodelphis_domestica
ENSBTAG00000008642	POLR1D	80	66.355	ENSMALG00000010652	polr1d	94	66.355	Monopterus_albus
ENSBTAG00000008642	POLR1D	100	87.218	MGP_CAROLIEiJ_G0028034	Polr1d	100	87.218	Mus_caroli
ENSBTAG00000008642	POLR1D	100	87.218	ENSMUSG00000029642	Polr1d	100	87.218	Mus_musculus
ENSBTAG00000008642	POLR1D	100	86.466	MGP_PahariEiJ_G0024600	Polr1d	100	86.466	Mus_pahari
ENSBTAG00000008642	POLR1D	100	87.970	MGP_SPRETEiJ_G0029032	Polr1d	100	87.970	Mus_spretus
ENSBTAG00000008642	POLR1D	99	84.848	ENSMLUG00000004118	-	99	84.848	Myotis_lucifugus
ENSBTAG00000008642	POLR1D	100	95.489	ENSMLUG00000027169	-	100	95.489	Myotis_lucifugus
ENSBTAG00000008642	POLR1D	87	94.828	ENSNGAG00000006014	Polr1d	100	94.828	Nannospalax_galili
ENSBTAG00000008642	POLR1D	80	70.093	ENSNBRG00000020327	polr1d	94	70.093	Neolamprologus_brichardi
ENSBTAG00000008642	POLR1D	100	94.737	ENSNLEG00000000358	POLR1D	100	94.737	Nomascus_leucogenys
ENSBTAG00000008642	POLR1D	100	92.481	ENSODEG00000005294	-	100	92.481	Octodon_degus
ENSBTAG00000008642	POLR1D	100	78.195	ENSODEG00000014801	-	100	78.195	Octodon_degus
ENSBTAG00000008642	POLR1D	79	80.952	ENSOANG00000008708	-	97	80.952	Ornithorhynchus_anatinus
ENSBTAG00000008642	POLR1D	100	94.737	ENSOCUG00000015706	POLR1D	82	94.737	Oryctolagus_cuniculus
ENSBTAG00000008642	POLR1D	80	70.093	ENSORLG00000010257	polr1d	94	70.093	Oryzias_latipes
ENSBTAG00000008642	POLR1D	83	69.369	ENSORLG00020000533	polr1d	75	69.369	Oryzias_latipes_hni
ENSBTAG00000008642	POLR1D	85	69.912	ENSORLG00015013267	polr1d	75	69.912	Oryzias_latipes_hsok
ENSBTAG00000008642	POLR1D	86	69.565	ENSOMEG00000014912	polr1d	77	69.565	Oryzias_melastigma
ENSBTAG00000008642	POLR1D	100	93.233	ENSOGAG00000014601	POLR1D	100	93.233	Otolemur_garnettii
ENSBTAG00000008642	POLR1D	94	98.400	ENSOARG00000017005	POLR1D	96	98.400	Ovis_aries
ENSBTAG00000008642	POLR1D	100	93.985	ENSPPAG00000028138	POLR1D	100	93.985	Pan_paniscus
ENSBTAG00000008642	POLR1D	99	94.697	ENSPPRG00000003381	POLR1D	99	94.697	Panthera_pardus
ENSBTAG00000008642	POLR1D	93	94.355	ENSPTIG00000018137	POLR1D	93	94.355	Panthera_tigris_altaica
ENSBTAG00000008642	POLR1D	100	94.737	ENSPTRG00000005734	POLR1D	100	94.737	Pan_troglodytes
ENSBTAG00000008642	POLR1D	100	93.985	ENSPANG00000020259	-	100	93.985	Papio_anubis
ENSBTAG00000008642	POLR1D	100	82.707	ENSPANG00000035051	-	100	82.707	Papio_anubis
ENSBTAG00000008642	POLR1D	86	62.609	ENSPKIG00000021891	polr1d	96	50.794	Paramormyrops_kingsleyae
ENSBTAG00000008642	POLR1D	87	73.504	ENSPSIG00000011822	POLR1D	91	73.504	Pelodiscus_sinensis
ENSBTAG00000008642	POLR1D	93	59.200	ENSPMGG00000012998	POLR1D	93	59.200	Periophthalmus_magnuspinnatus
ENSBTAG00000008642	POLR1D	84	68.750	ENSPMGG00000010359	polr1d	97	68.750	Periophthalmus_magnuspinnatus
ENSBTAG00000008642	POLR1D	100	88.722	ENSPEMG00000006336	-	100	88.722	Peromyscus_maniculatus_bairdii
ENSBTAG00000008642	POLR1D	82	58.716	ENSPMAG00000004228	polr1d	92	58.716	Petromyzon_marinus
ENSBTAG00000008642	POLR1D	80	83.019	ENSPCIG00000001673	POLR1D	93	83.019	Phascolarctos_cinereus
ENSBTAG00000008642	POLR1D	79	73.333	ENSPFOG00000023343	polr1d	92	75.000	Poecilia_formosa
ENSBTAG00000008642	POLR1D	79	73.333	ENSPLAG00000009675	polr1d	92	73.333	Poecilia_latipinna
ENSBTAG00000008642	POLR1D	79	73.333	ENSPMEG00000004628	polr1d	92	73.333	Poecilia_mexicana
ENSBTAG00000008642	POLR1D	79	73.333	ENSPREG00000022032	polr1d	92	73.333	Poecilia_reticulata
ENSBTAG00000008642	POLR1D	100	94.737	ENSPCOG00000028175	POLR1D	100	94.737	Propithecus_coquereli
ENSBTAG00000008642	POLR1D	80	70.093	ENSPNYG00000000107	polr1d	94	70.093	Pundamilia_nyererei
ENSBTAG00000008642	POLR1D	76	69.307	ENSPNAG00000001512	polr1d	93	65.179	Pygocentrus_nattereri
ENSBTAG00000008642	POLR1D	100	90.226	ENSRBIG00000000336	-	100	90.226	Rhinopithecus_bieti
ENSBTAG00000008642	POLR1D	100	93.985	ENSRBIG00000036378	-	100	93.985	Rhinopithecus_bieti
ENSBTAG00000008642	POLR1D	100	93.985	ENSRROG00000042232	-	100	93.985	Rhinopithecus_roxellana
ENSBTAG00000008642	POLR1D	100	90.977	ENSRROG00000026751	-	100	90.977	Rhinopithecus_roxellana
ENSBTAG00000008642	POLR1D	89	47.059	YNL113W	RPC19	84	47.059	Saccharomyces_cerevisiae
ENSBTAG00000008642	POLR1D	86	89.474	ENSSBOG00000030146	-	84	89.474	Saimiri_boliviensis_boliviensis
ENSBTAG00000008642	POLR1D	100	95.489	ENSSBOG00000028482	-	100	95.489	Saimiri_boliviensis_boliviensis
ENSBTAG00000008642	POLR1D	86	76.316	ENSSHAG00000001190	POLR1D	88	76.316	Sarcophilus_harrisii
ENSBTAG00000008642	POLR1D	82	74.312	ENSSFOG00015011375	polr1d	96	74.312	Scleropages_formosus
ENSBTAG00000008642	POLR1D	80	67.290	ENSSMAG00000011861	polr1d	94	67.290	Scophthalmus_maximus
ENSBTAG00000008642	POLR1D	80	66.355	ENSSDUG00000011930	polr1d	94	66.355	Seriola_dumerili
ENSBTAG00000008642	POLR1D	86	61.739	ENSSLDG00000023871	polr1d	97	61.739	Seriola_lalandi_dorsalis
ENSBTAG00000008642	POLR1D	100	94.737	ENSSARG00000007840	POLR1D	100	94.737	Sorex_araneus
ENSBTAG00000008642	POLR1D	79	75.238	ENSSPUG00000005786	POLR1D	95	72.072	Sphenodon_punctatus
ENSBTAG00000008642	POLR1D	79	70.476	ENSSPAG00000011764	polr1d	92	70.476	Stegastes_partitus
ENSBTAG00000008642	POLR1D	100	93.233	ENSSSCG00000009310	POLR1D	100	93.233	Sus_scrofa
ENSBTAG00000008642	POLR1D	72	78.125	ENSTGUG00000005450	POLR1D	100	78.125	Taeniopygia_guttata
ENSBTAG00000008642	POLR1D	78	66.346	ENSTRUG00000019741	polr1d	91	66.346	Takifugu_rubripes
ENSBTAG00000008642	POLR1D	93	92.742	ENSTBEG00000007006	POLR1D	100	92.742	Tupaia_belangeri
ENSBTAG00000008642	POLR1D	100	96.241	ENSUAMG00000011413	POLR1D	100	96.241	Ursus_americanus
ENSBTAG00000008642	POLR1D	93	95.968	ENSUMAG00000016968	POLR1D	97	95.968	Ursus_maritimus
ENSBTAG00000008642	POLR1D	100	96.241	ENSVVUG00000009216	POLR1D	100	96.241	Vulpes_vulpes
ENSBTAG00000008642	POLR1D	74	75.510	ENSXCOG00000011731	polr1d	75	75.510	Xiphophorus_couchianus
ENSBTAG00000008642	POLR1D	74	75.510	ENSXMAG00000017538	polr1d	75	75.510	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	IEA	Function
GO:0006360	transcription by RNA polymerase I	-	IEA	Process
GO:0006383	transcription by RNA polymerase III	-	IEA	Process
GO:0046983	protein dimerization activity	-	IEA	Function