EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000008684 (Gene tree)
Gene ID: 518027
Gene Symbol: -
Alias: -
Full Name: RING finger protein 113A
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 1056 bases
Position: chr29:24589163-24590218
Accession: 518027
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000011446	zf-CCCH	PF00642.24	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000011446	-	1056	-	ENSBTAP00000011446	351 (aa)	XP_005226829	E1BF77

Gene Model

Click here to download ENSBTAG00000008684's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000008684's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000008684	-	100	84.375	ENSBTAG00000006034	RNF113A	100	83.523

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000008684	-	100	82.386	ENSG00000125352	RNF113A	100	81.818	Homo_sapiens
ENSBTAG00000008684	-	95	66.269	ENSG00000139797	RNF113B	99	64.478	Homo_sapiens
ENSBTAG00000008684	-	92	64.815	ENSAPOG00000017510	rnf113a	93	64.353	Acanthochromis_polyacanthus
ENSBTAG00000008684	-	100	85.593	ENSAMEG00000019845	-	100	84.463	Ailuropoda_melanoleuca
ENSBTAG00000008684	-	94	57.704	ENSACIG00000007458	rnf113a	72	72.807	Amphilophus_citrinellus
ENSBTAG00000008684	-	90	66.246	ENSAOCG00000003485	rnf113a	93	64.984	Amphiprion_ocellaris
ENSBTAG00000008684	-	92	65.123	ENSAPEG00000001084	rnf113a	93	64.984	Amphiprion_percula
ENSBTAG00000008684	-	94	64.955	ENSATEG00000022950	rnf113a	97	63.142	Anabas_testudineus
ENSBTAG00000008684	-	70	80.567	ENSAPLG00000012510	-	90	81.893	Anas_platyrhynchos
ENSBTAG00000008684	-	87	71.242	ENSACAG00000012485	-	94	71.242	Anolis_carolinensis
ENSBTAG00000008684	-	100	81.818	ENSANAG00000013925	-	100	81.818	Aotus_nancymaae
ENSBTAG00000008684	-	93	80.734	ENSANAG00000024332	-	95	82.263	Aotus_nancymaae
ENSBTAG00000008684	-	95	64.897	ENSANAG00000020431	RNF113B	99	63.422	Aotus_nancymaae
ENSBTAG00000008684	-	96	62.722	ENSACLG00000025256	rnf113a	97	64.242	Astatotilapia_calliptera
ENSBTAG00000008684	-	95	64.072	ENSAMXG00000011273	rnf113a	97	64.526	Astyanax_mexicanus
ENSBTAG00000008684	-	88	42.767	WBGene00010476	rnf-113	82	41.194	Caenorhabditis_elegans
ENSBTAG00000008684	-	100	82.670	ENSCJAG00000022327	RNF113A	100	82.102	Callithrix_jacchus
ENSBTAG00000008684	-	95	66.866	ENSCJAG00000004501	RNF113B	99	65.672	Callithrix_jacchus
ENSBTAG00000008684	-	100	83.754	ENSCAFG00000018430	-	100	82.913	Canis_familiaris
ENSBTAG00000008684	-	100	71.309	ENSCAFG00000018373	-	100	70.752	Canis_familiaris
ENSBTAG00000008684	-	100	83.754	ENSCAFG00020004044	-	100	82.913	Canis_lupus_dingo
ENSBTAG00000008684	-	100	71.588	ENSCAFG00020020280	-	100	71.309	Canis_lupus_dingo
ENSBTAG00000008684	-	100	84.659	ENSCHIG00000018820	-	100	83.807	Capra_hircus
ENSBTAG00000008684	-	100	93.162	ENSCHIG00000015616	-	100	92.593	Capra_hircus
ENSBTAG00000008684	-	100	83.003	ENSTSYG00000001308	RNF113A	100	82.153	Carlito_syrichta
ENSBTAG00000008684	-	98	80.580	ENSCPOG00000038517	-	99	79.710	Cavia_porcellus
ENSBTAG00000008684	-	100	82.386	ENSCCAG00000013617	RNF113A	100	81.818	Cebus_capucinus
ENSBTAG00000008684	-	95	67.164	ENSCCAG00000021327	RNF113B	99	65.487	Cebus_capucinus
ENSBTAG00000008684	-	100	82.436	ENSCATG00000002702	RNF113A	100	81.870	Cercocebus_atys
ENSBTAG00000008684	-	100	81.921	ENSCLAG00000017479	-	100	81.356	Chinchilla_lanigera
ENSBTAG00000008684	-	100	64.689	ENSCSAG00000000222	RNF113B	100	63.408	Chlorocebus_sabaeus
ENSBTAG00000008684	-	100	71.591	ENSCSAG00000019472	-	100	70.225	Chlorocebus_sabaeus
ENSBTAG00000008684	-	79	79.348	ENSCHOG00000008711	-	100	77.536	Choloepus_hoffmanni
ENSBTAG00000008684	-	95	70.448	ENSCPBG00000026980	-	98	71.818	Chrysemys_picta_bellii
ENSBTAG00000008684	-	81	61.620	ENSCING00000009197	-	87	60.900	Ciona_intestinalis
ENSBTAG00000008684	-	64	69.643	ENSCSAVG00000006210	-	83	62.731	Ciona_savignyi
ENSBTAG00000008684	-	95	66.366	ENSCANG00000041552	RNF113B	99	64.985	Colobus_angolensis_palliatus
ENSBTAG00000008684	-	100	82.955	ENSCANG00000037715	RNF113A	100	82.386	Colobus_angolensis_palliatus
ENSBTAG00000008684	-	99	79.143	ENSCGRG00001002251	Rnf113a1	99	78.348	Cricetulus_griseus_chok1gshd
ENSBTAG00000008684	-	99	78.857	ENSCGRG00000019441	Rnf113a1	99	78.063	Cricetulus_griseus_crigri
ENSBTAG00000008684	-	98	79.130	ENSCGRG00000016675	Rnf113a2	99	79.710	Cricetulus_griseus_crigri
ENSBTAG00000008684	-	94	62.538	ENSCSEG00000021570	rnf113a	83	61.631	Cynoglossus_semilaevis
ENSBTAG00000008684	-	94	64.653	ENSCVAG00000011305	rnf113a	97	63.444	Cyprinodon_variegatus
ENSBTAG00000008684	-	95	66.366	ENSDARG00000037930	rnf113a	98	65.465	Danio_rerio
ENSBTAG00000008684	-	98	75.942	ENSDORG00000027624	Rnf113a2	99	75.362	Dipodomys_ordii
ENSBTAG00000008684	-	89	55.031	FBgn0038772	mdlc	87	54.232	Drosophila_melanogaster
ENSBTAG00000008684	-	100	80.627	ENSETEG00000018346	-	100	79.487	Echinops_telfairi
ENSBTAG00000008684	-	93	60.661	ENSEBUG00000016079	rnf113a	97	60.060	Eptatretus_burgeri
ENSBTAG00000008684	-	100	81.250	ENSEASG00005010538	-	100	80.114	Equus_asinus_asinus
ENSBTAG00000008684	-	93	81.098	ENSECAG00000004638	-	99	79.878	Equus_caballus
ENSBTAG00000008684	-	100	84.091	ENSECAG00000003934	-	100	82.955	Equus_caballus
ENSBTAG00000008684	-	94	65.152	ENSELUG00000020657	rnf113a	97	64.242	Esox_lucius
ENSBTAG00000008684	-	100	82.102	ENSFCAG00000028962	-	100	82.670	Felis_catus
ENSBTAG00000008684	-	100	85.227	ENSFCAG00000025700	-	100	84.943	Felis_catus
ENSBTAG00000008684	-	100	84.659	ENSFCAG00000024392	-	97	84.375	Felis_catus
ENSBTAG00000008684	-	83	73.103	ENSFALG00000004633	-	94	73.868	Ficedula_albicollis
ENSBTAG00000008684	-	92	64.198	ENSFHEG00000023305	rnf113a	93	64.669	Fundulus_heteroclitus
ENSBTAG00000008684	-	90	62.385	ENSGMOG00000004541	rnf113a	94	61.468	Gadus_morhua
ENSBTAG00000008684	-	90	71.835	ENSGALG00000000538	RNF113A	98	69.162	Gallus_gallus
ENSBTAG00000008684	-	90	65.615	ENSGAFG00000011863	rnf113a	93	64.984	Gambusia_affinis
ENSBTAG00000008684	-	93	61.976	ENSGACG00000009738	rnf113a	97	60.778	Gasterosteus_aculeatus
ENSBTAG00000008684	-	91	73.354	ENSGAGG00000020490	-	98	71.212	Gopherus_agassizii
ENSBTAG00000008684	-	100	82.386	ENSGGOG00000002324	RNF113A	100	81.818	Gorilla_gorilla
ENSBTAG00000008684	-	95	67.164	ENSGGOG00000023052	RNF113B	99	65.373	Gorilla_gorilla
ENSBTAG00000008684	-	96	62.426	ENSHBUG00000008626	rnf113a	97	63.939	Haplochromis_burtoni
ENSBTAG00000008684	-	100	81.197	ENSHGLG00000019571	-	100	80.342	Heterocephalus_glaber_female
ENSBTAG00000008684	-	100	80.056	ENSHGLG00100019582	-	100	79.494	Heterocephalus_glaber_male
ENSBTAG00000008684	-	93	64.024	ENSHCOG00000003421	rnf113a	97	62.805	Hippocampus_comes
ENSBTAG00000008684	-	92	66.149	ENSIPUG00000013431	RNF113A	95	65.528	Ictalurus_punctatus
ENSBTAG00000008684	-	100	83.807	ENSSTOG00000019866	-	100	81.818	Ictidomys_tridecemlineatus
ENSBTAG00000008684	-	75	60.985	ENSJJAG00000019849	Rnf113a1	99	54.717	Jaculus_jaculus
ENSBTAG00000008684	-	94	65.152	ENSKMAG00000009830	rnf113a	97	63.939	Kryptolebias_marmoratus
ENSBTAG00000008684	-	94	64.350	ENSLBEG00000004627	rnf113a	97	64.048	Labrus_bergylta
ENSBTAG00000008684	-	93	67.692	ENSLACG00000013178	rnf113a	96	66.871	Latimeria_chalumnae
ENSBTAG00000008684	-	93	65.549	ENSLOCG00000011785	rnf113a	97	65.046	Lepisosteus_oculatus
ENSBTAG00000008684	-	100	80.342	ENSLAFG00000013906	-	99	80.571	Loxodonta_africana
ENSBTAG00000008684	-	100	82.436	ENSMFAG00000018472	RNF113A	100	81.870	Macaca_fascicularis
ENSBTAG00000008684	-	100	82.436	ENSMMUG00000020223	RNF113A	100	81.870	Macaca_mulatta
ENSBTAG00000008684	-	100	82.436	ENSMNEG00000019778	RNF113A	100	81.870	Macaca_nemestrina
ENSBTAG00000008684	-	100	82.436	ENSMLEG00000020750	RNF113A	100	81.870	Mandrillus_leucophaeus
ENSBTAG00000008684	-	76	71.536	ENSMLEG00000038757	RNF113B	83	73.387	Mandrillus_leucophaeus
ENSBTAG00000008684	-	94	64.048	ENSMAMG00000021895	rnf113a	97	62.840	Mastacembelus_armatus
ENSBTAG00000008684	-	96	62.722	ENSMZEG00005023086	rnf113a	97	64.242	Maylandia_zebra
ENSBTAG00000008684	-	79	76.812	ENSMGAG00000001753	-	99	74.227	Meleagris_gallopavo
ENSBTAG00000008684	-	100	83.333	ENSMICG00000001750	-	100	82.486	Microcebus_murinus
ENSBTAG00000008684	-	95	80.299	ENSMICG00000038084	-	95	80.597	Microcebus_murinus
ENSBTAG00000008684	-	99	78.902	ENSMOCG00000005370	-	96	78.613	Microtus_ochrogaster
ENSBTAG00000008684	-	90	65.615	ENSMMOG00000016954	rnf113a	94	64.353	Mola_mola
ENSBTAG00000008684	-	90	59.937	ENSMALG00000007938	rnf113a	97	57.402	Monopterus_albus
ENSBTAG00000008684	-	98	80.870	MGP_CAROLIEiJ_G0017943	Rnf113a2	99	81.449	Mus_caroli
ENSBTAG00000008684	-	98	80.870	ENSMUSG00000098134	Rnf113a2	99	81.449	Mus_musculus
ENSBTAG00000008684	-	100	79.202	ENSMUSG00000036537	Rnf113a1	99	78.857	Mus_musculus
ENSBTAG00000008684	-	99	79.310	MGP_PahariEiJ_G0031547	Rnf113a1	99	79.023	Mus_pahari
ENSBTAG00000008684	-	98	81.159	MGP_PahariEiJ_G0029702	Rnf113a2	99	82.029	Mus_pahari
ENSBTAG00000008684	-	100	79.487	MGP_SPRETEiJ_G0034156	Rnf113a1	99	79.143	Mus_spretus
ENSBTAG00000008684	-	98	80.870	MGP_SPRETEiJ_G0018788	Rnf113a2	99	81.449	Mus_spretus
ENSBTAG00000008684	-	100	81.690	ENSMPUG00000019358	-	100	82.535	Mustela_putorius_furo
ENSBTAG00000008684	-	100	76.056	ENSMLUG00000010856	-	100	74.648	Myotis_lucifugus
ENSBTAG00000008684	-	100	78.371	ENSMLUG00000016812	-	100	77.809	Myotis_lucifugus
ENSBTAG00000008684	-	96	62.722	ENSNBRG00000004314	rnf113a	97	64.242	Neolamprologus_brichardi
ENSBTAG00000008684	-	100	81.818	ENSNLEG00000018333	RNF113A	100	81.250	Nomascus_leucogenys
ENSBTAG00000008684	-	95	66.269	ENSNLEG00000007844	RNF113B	99	65.373	Nomascus_leucogenys
ENSBTAG00000008684	-	96	71.765	ENSMEUG00000001855	-	100	72.059	Notamacropus_eugenii
ENSBTAG00000008684	-	96	63.314	ENSONIG00000000741	rnf113a	97	63.939	Oreochromis_niloticus
ENSBTAG00000008684	-	98	70.231	ENSOANG00000002592	-	99	70.231	Ornithorhynchus_anatinus
ENSBTAG00000008684	-	100	81.586	ENSOCUG00000016207	-	100	81.303	Oryctolagus_cuniculus
ENSBTAG00000008684	-	93	64.110	ENSORLG00000002442	rnf113a	97	63.190	Oryzias_latipes
ENSBTAG00000008684	-	93	63.804	ENSORLG00020011512	rnf113a	97	62.883	Oryzias_latipes_hni
ENSBTAG00000008684	-	93	64.110	ENSORLG00015004382	rnf113a	97	63.190	Oryzias_latipes_hsok
ENSBTAG00000008684	-	94	64.955	ENSOMEG00000020197	rnf113a	97	64.048	Oryzias_melastigma
ENSBTAG00000008684	-	100	81.303	ENSOGAG00000031602	RNF113A	100	79.603	Otolemur_garnettii
ENSBTAG00000008684	-	100	80.057	ENSOGAG00000011638	RNF113B	100	79.487	Otolemur_garnettii
ENSBTAG00000008684	-	100	84.659	ENSOARG00000009771	-	100	83.807	Ovis_aries
ENSBTAG00000008684	-	100	96.581	ENSOARG00000015294	-	100	96.581	Ovis_aries
ENSBTAG00000008684	-	100	82.386	ENSPPAG00000009537	RNF113A	100	81.818	Pan_paniscus
ENSBTAG00000008684	-	95	67.164	ENSPPAG00000040641	RNF113B	99	65.373	Pan_paniscus
ENSBTAG00000008684	-	100	81.250	ENSPPRG00000020640	-	100	81.818	Panthera_pardus
ENSBTAG00000008684	-	100	85.227	ENSPPRG00000011512	-	100	84.943	Panthera_pardus
ENSBTAG00000008684	-	100	85.227	ENSPTIG00000007986	-	100	84.943	Panthera_tigris_altaica
ENSBTAG00000008684	-	95	67.164	ENSPTRG00000005987	RNF113B	99	65.373	Pan_troglodytes
ENSBTAG00000008684	-	100	82.386	ENSPTRG00000022231	RNF113A	100	81.818	Pan_troglodytes
ENSBTAG00000008684	-	100	82.436	ENSPANG00000011522	RNF113A	100	81.870	Papio_anubis
ENSBTAG00000008684	-	94	68.182	ENSPKIG00000016796	rnf113a	97	66.667	Paramormyrops_kingsleyae
ENSBTAG00000008684	-	83	76.552	ENSPSIG00000012676	-	98	76.307	Pelodiscus_sinensis
ENSBTAG00000008684	-	90	65.300	ENSPMGG00000009668	rnf113a	93	64.984	Periophthalmus_magnuspinnatus
ENSBTAG00000008684	-	100	79.545	ENSPEMG00000002490	Rnf113a1	99	79.487	Peromyscus_maniculatus_bairdii
ENSBTAG00000008684	-	84	65.306	ENSPMAG00000005184	rnf113a	97	65.292	Petromyzon_marinus
ENSBTAG00000008684	-	98	72.000	ENSPCIG00000028916	-	99	71.714	Phascolarctos_cinereus
ENSBTAG00000008684	-	90	65.931	ENSPFOG00000014248	rnf113a	93	64.984	Poecilia_formosa
ENSBTAG00000008684	-	90	65.931	ENSPLAG00000010435	rnf113a	93	64.984	Poecilia_latipinna
ENSBTAG00000008684	-	90	66.246	ENSPMEG00000010641	rnf113a	93	65.300	Poecilia_mexicana
ENSBTAG00000008684	-	90	66.246	ENSPREG00000009900	rnf113a	93	65.300	Poecilia_reticulata
ENSBTAG00000008684	-	95	67.164	ENSPPYG00000005460	RNF113B	99	65.192	Pongo_abelii
ENSBTAG00000008684	-	100	82.102	ENSPPYG00000020676	RNF113A	100	81.534	Pongo_abelii
ENSBTAG00000008684	-	100	81.197	ENSPCAG00000014633	-	99	80.057	Procavia_capensis
ENSBTAG00000008684	-	96	78.466	ENSPCOG00000005671	-	95	77.286	Propithecus_coquereli
ENSBTAG00000008684	-	96	62.722	ENSPNYG00000013863	rnf113a	97	64.242	Pundamilia_nyererei
ENSBTAG00000008684	-	97	62.647	ENSPNAG00000017428	rnf113a	99	62.059	Pygocentrus_nattereri
ENSBTAG00000008684	-	100	79.487	ENSRNOG00000059412	Rnf113a1	99	79.143	Rattus_norvegicus
ENSBTAG00000008684	-	100	79.487	ENSRNOG00000034040	LOC108348079	99	79.143	Rattus_norvegicus
ENSBTAG00000008684	-	100	82.670	ENSRBIG00000017389	RNF113A	100	82.102	Rhinopithecus_bieti
ENSBTAG00000008684	-	95	65.476	ENSRBIG00000036094	RNF113B	99	63.824	Rhinopithecus_bieti
ENSBTAG00000008684	-	95	65.476	ENSRROG00000045661	RNF113B	99	63.824	Rhinopithecus_roxellana
ENSBTAG00000008684	-	100	82.670	ENSRROG00000012149	RNF113A	100	82.102	Rhinopithecus_roxellana
ENSBTAG00000008684	-	100	82.670	ENSSBOG00000017704	RNF113A	100	82.102	Saimiri_boliviensis_boliviensis
ENSBTAG00000008684	-	95	64.583	ENSSBOG00000029719	RNF113B	99	66.667	Saimiri_boliviensis_boliviensis
ENSBTAG00000008684	-	100	70.588	ENSSHAG00000008839	-	100	68.908	Sarcophilus_harrisii
ENSBTAG00000008684	-	95	65.672	ENSSFOG00015016567	rnf113a	97	64.776	Scleropages_formosus
ENSBTAG00000008684	-	92	62.963	ENSSMAG00000009235	rnf113a	93	64.038	Scophthalmus_maximus
ENSBTAG00000008684	-	96	63.018	ENSSDUG00000022244	rnf113a	97	62.840	Seriola_dumerili
ENSBTAG00000008684	-	96	63.018	ENSSLDG00000018582	rnf113a	97	62.840	Seriola_lalandi_dorsalis
ENSBTAG00000008684	-	100	81.534	ENSSARG00000010436	-	100	80.398	Sorex_araneus
ENSBTAG00000008684	-	91	73.041	ENSSPUG00000018786	-	85	72.727	Sphenodon_punctatus
ENSBTAG00000008684	-	92	64.815	ENSSPAG00000013187	rnf113a	97	63.142	Stegastes_partitus
ENSBTAG00000008684	-	100	83.569	ENSSSCG00000032973	-	100	83.286	Sus_scrofa
ENSBTAG00000008684	-	90	72.152	ENSTGUG00000001947	-	98	69.789	Taeniopygia_guttata
ENSBTAG00000008684	-	94	63.333	ENSTRUG00000011142	rnf113a	98	63.142	Takifugu_rubripes
ENSBTAG00000008684	-	92	63.467	ENSTNIG00000014938	rnf113a	95	62.539	Tetraodon_nigroviridis
ENSBTAG00000008684	-	100	82.436	ENSTBEG00000012687	-	100	82.153	Tupaia_belangeri
ENSBTAG00000008684	-	95	83.631	ENSUAMG00000024564	-	96	84.524	Ursus_americanus
ENSBTAG00000008684	-	96	83.481	ENSUMAG00000002167	-	99	84.366	Ursus_maritimus
ENSBTAG00000008684	-	90	80.189	ENSVPAG00000004521	-	95	83.502	Vicugna_pacos
ENSBTAG00000008684	-	72	66.667	ENSVVUG00000004522	-	83	68.651	Vulpes_vulpes
ENSBTAG00000008684	-	100	83.473	ENSVVUG00000011662	-	100	82.633	Vulpes_vulpes
ENSBTAG00000008684	-	98	62.391	ENSXETG00000002042	rnf113a	99	63.557	Xenopus_tropicalis
ENSBTAG00000008684	-	90	64.241	ENSXCOG00000017542	rnf113a	96	63.291	Xiphophorus_couchianus
ENSBTAG00000008684	-	90	65.931	ENSXMAG00000008169	rnf113a	93	64.984	Xiphophorus_maculatus