EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSBTAG00000008716 (Gene tree)
Gene ID
338071
Gene Symbol
SSB
Alias
-
Full Name
Sjogren syndrome antigen B
Gene Type
protein_coding
Species
Bos_taurus
Status
putative
Strand
Minus strand
Length
8994 bases
Position
chr2:26545255-26554248
Accession
338071
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSBTAP00000011484RRM_1PF00076.221.7e-1411
ENSBTAP00000011484RRM_3PF08777.115e-3111
ENSBTAP00000011484LaPF05383.178.7e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSBTAT00000011484SSB-2011384-ENSBTAP00000011484404 (aa)XP_024855065P10881
Gene Model
Click here to download ENSBTAG00000008716's gene model file
Pathways
Pathway IDPathway NameSource
bta05322Systemic lupus erythematosusKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000008716's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSBTAG00000008716SSB10093.627ENSG00000138385SSB10098.370Homo_sapiens
ENSBTAG00000008716SSB9855.112ENSAPOG00000003448ssb10055.556Acanthochromis_polyacanthus
ENSBTAG00000008716SSB10091.667ENSAMEG00000010507SSB10091.667Ailuropoda_melanoleuca
ENSBTAG00000008716SSB9258.289ENSACIG00000001738ssb9758.133Amphilophus_citrinellus
ENSBTAG00000008716SSB9855.362ENSAOCG00000020398ssb10056.049Amphiprion_ocellaris
ENSBTAG00000008716SSB9855.611ENSAPEG00000020395ssb10056.296Amphiprion_percula
ENSBTAG00000008716SSB9957.531ENSATEG00000016884ssb10058.025Anabas_testudineus
ENSBTAG00000008716SSB10070.755ENSAPLG00000006109SSB10072.471Anas_platyrhynchos
ENSBTAG00000008716SSB10066.829ENSACAG00000017008SSB9966.829Anolis_carolinensis
ENSBTAG00000008716SSB10084.691ENSANAG00000027195-10084.691Aotus_nancymaae
ENSBTAG00000008716SSB9954.839ENSACLG00000010798ssb10054.591Astatotilapia_calliptera
ENSBTAG00000008716SSB9854.902ENSAMXG00000012606ssb10056.039Astyanax_mexicanus
ENSBTAG00000008716SSB7335.762WBGene00016653C44E4.49332.708Caenorhabditis_elegans
ENSBTAG00000008716SSB10093.333ENSCJAG00000045073SSB10093.333Callithrix_jacchus
ENSBTAG00000008716SSB10094.581ENSCAFG00000012418SSB10094.581Canis_familiaris
ENSBTAG00000008716SSB10094.581ENSCAFG00020002900SSB10094.581Canis_lupus_dingo
ENSBTAG00000008716SSB10092.346ENSCHIG00000022196-10092.346Capra_hircus
ENSBTAG00000008716SSB10098.272ENSCHIG00000022624-10098.272Capra_hircus
ENSBTAG00000008716SSB10094.568ENSTSYG00000000097SSB10094.568Carlito_syrichta
ENSBTAG00000008716SSB10095.309ENSCPOG00000003338SSB10095.309Cavia_porcellus
ENSBTAG00000008716SSB10093.827ENSCCAG00000035147SSB10093.827Cebus_capucinus
ENSBTAG00000008716SSB10073.086ENSCATG00000036701SSB10073.086Cercocebus_atys
ENSBTAG00000008716SSB10069.877ENSCATG00000042909-10069.877Cercocebus_atys
ENSBTAG00000008716SSB10095.062ENSCLAG00000015617-10095.062Chinchilla_lanigera
ENSBTAG00000008716SSB9885.390ENSCSAG00000018390-10085.390Chlorocebus_sabaeus
ENSBTAG00000008716SSB10093.827ENSCSAG00000015200SSB8993.827Chlorocebus_sabaeus
ENSBTAG00000008716SSB10094.074ENSCHOG00000007763SSB10094.074Choloepus_hoffmanni
ENSBTAG00000008716SSB10078.240ENSCPBG00000006519SSB10078.973Chrysemys_picta_bellii
ENSBTAG00000008716SSB10094.321ENSCANG00000027695SSB10094.321Colobus_angolensis_palliatus
ENSBTAG00000008716SSB9874.185ENSCANG00000028838-9574.185Colobus_angolensis_palliatus
ENSBTAG00000008716SSB10079.753ENSCANG00000033240-10079.753Colobus_angolensis_palliatus
ENSBTAG00000008716SSB10078.049ENSCGRG00001024831Ssb10079.268Cricetulus_griseus_chok1gshd
ENSBTAG00000008716SSB10078.049ENSCGRG00000005387Ssb10079.268Cricetulus_griseus_crigri
ENSBTAG00000008716SSB9857.143ENSCSEG00000011599ssb9957.895Cynoglossus_semilaevis
ENSBTAG00000008716SSB9958.128ENSCVAG00000021558ssb10058.621Cyprinodon_variegatus
ENSBTAG00000008716SSB9857.463ENSDARG00000029252ssb9957.463Danio_rerio
ENSBTAG00000008716SSB10093.827ENSDNOG00000013450SSB10093.827Dasypus_novemcinctus
ENSBTAG00000008716SSB10083.698ENSDORG00000005543Ssb10083.698Dipodomys_ordii
ENSBTAG00000008716SSB8434.384FBgn0011638La9233.780Drosophila_melanogaster
ENSBTAG00000008716SSB5893.035ENSETEG00000004614-6193.035Echinops_telfairi
ENSBTAG00000008716SSB9647.826ENSEBUG00000001237ssb9648.082Eptatretus_burgeri
ENSBTAG00000008716SSB10096.790ENSEASG00005022835SSB10096.790Equus_asinus_asinus
ENSBTAG00000008716SSB10097.037ENSECAG00000018495SSB10097.037Equus_caballus
ENSBTAG00000008716SSB7675.163ENSEEUG00000008077SSB7875.163Erinaceus_europaeus
ENSBTAG00000008716SSB9859.406ENSELUG00000020929ssb10059.902Esox_lucius
ENSBTAG00000008716SSB10094.581ENSFCAG00000011601SSB10094.581Felis_catus
ENSBTAG00000008716SSB10075.430ENSFALG00000000930SSB10075.430Ficedula_albicollis
ENSBTAG00000008716SSB10094.568ENSFDAG00000000598SSB10094.568Fukomys_damarensis
ENSBTAG00000008716SSB7354.849ENSFHEG00000003268ssb9555.229Fundulus_heteroclitus
ENSBTAG00000008716SSB9755.335ENSGMOG00000002664ssb9956.079Gadus_morhua
ENSBTAG00000008716SSB10075.245ENSGALG00000009677SSB10075.245Gallus_gallus
ENSBTAG00000008716SSB9956.158ENSGAFG00000002749ssb10056.757Gambusia_affinis
ENSBTAG00000008716SSB9954.988ENSGACG00000005107ssb10055.340Gasterosteus_aculeatus
ENSBTAG00000008716SSB10077.995ENSGAGG00000007807SSB10078.240Gopherus_agassizii
ENSBTAG00000008716SSB10077.531ENSGGOG00000024891-10077.531Gorilla_gorilla
ENSBTAG00000008716SSB6388.889ENSGGOG00000023471-10088.889Gorilla_gorilla
ENSBTAG00000008716SSB9954.342ENSHBUG00000006584ssb10054.094Haplochromis_burtoni
ENSBTAG00000008716SSB10086.453ENSHGLG00000004478-10086.453Heterocephalus_glaber_female
ENSBTAG00000008716SSB10086.386ENSHGLG00000005832-10086.386Heterocephalus_glaber_female
ENSBTAG00000008716SSB10093.447ENSHGLG00000017580-10093.447Heterocephalus_glaber_female
ENSBTAG00000008716SSB10093.447ENSHGLG00100003084-10093.447Heterocephalus_glaber_male
ENSBTAG00000008716SSB10081.683ENSHGLG00100008767-10081.683Heterocephalus_glaber_male
ENSBTAG00000008716SSB9855.556ENSHCOG00000019011ssb9955.808Hippocampus_comes
ENSBTAG00000008716SSB9758.706ENSIPUG00000003681SSB9959.158Ictalurus_punctatus
ENSBTAG00000008716SSB10094.815ENSSTOG00000008416SSB10094.815Ictidomys_tridecemlineatus
ENSBTAG00000008716SSB9967.662ENSJJAG00000016250-9967.662Jaculus_jaculus
ENSBTAG00000008716SSB10079.433ENSJJAG00000023158-10079.433Jaculus_jaculus
ENSBTAG00000008716SSB9957.037ENSKMAG00000017317ssb10057.531Kryptolebias_marmoratus
ENSBTAG00000008716SSB9855.112ENSLBEG00000017345ssb10056.049Labrus_bergylta
ENSBTAG00000008716SSB9966.339ENSLACG00000014056SSB9969.682Latimeria_chalumnae
ENSBTAG00000008716SSB9867.082ENSLOCG00000007933ssb9967.581Lepisosteus_oculatus
ENSBTAG00000008716SSB7569.868ENSLAFG00000026721-9969.868Loxodonta_africana
ENSBTAG00000008716SSB10085.782ENSLAFG00000000867-10088.626Loxodonta_africana
ENSBTAG00000008716SSB10079.012ENSLAFG00000028909-10079.012Loxodonta_africana
ENSBTAG00000008716SSB10094.074ENSMFAG00000039066SSB10094.074Macaca_fascicularis
ENSBTAG00000008716SSB8880.952ENSMFAG00000041478-10080.952Macaca_fascicularis
ENSBTAG00000008716SSB9965.757ENSMMUG00000039889-10066.005Macaca_mulatta
ENSBTAG00000008716SSB10079.506ENSMMUG00000011724-9779.506Macaca_mulatta
ENSBTAG00000008716SSB10094.074ENSMMUG00000023051SSB10094.074Macaca_mulatta
ENSBTAG00000008716SSB10081.707ENSMNEG00000028321SSB85100.000Macaca_nemestrina
ENSBTAG00000008716SSB8880.952ENSMNEG00000034698-10080.952Macaca_nemestrina
ENSBTAG00000008716SSB10067.654ENSMLEG00000042644-10067.654Mandrillus_leucophaeus
ENSBTAG00000008716SSB10094.074ENSMLEG00000035717SSB10094.074Mandrillus_leucophaeus
ENSBTAG00000008716SSB9958.272ENSMAMG00000004800ssb10058.765Mastacembelus_armatus
ENSBTAG00000008716SSB9954.839ENSMZEG00005005749ssb10054.591Maylandia_zebra
ENSBTAG00000008716SSB10075.245ENSMGAG00000010328SSB9977.073Meleagris_gallopavo
ENSBTAG00000008716SSB9995.037ENSMICG00000028252-9995.037Microcebus_murinus
ENSBTAG00000008716SSB9886.398ENSMICG00000033304-9887.113Microcebus_murinus
ENSBTAG00000008716SSB8580.503ENSMODG00000007027-9980.503Monodelphis_domestica
ENSBTAG00000008716SSB10052.555ENSMODG00000019271-10052.798Monodelphis_domestica
ENSBTAG00000008716SSB10078.313ENSMODG00000008227-10079.277Monodelphis_domestica
ENSBTAG00000008716SSB9058.583ENSMALG00000008045ssb9059.151Monopterus_albus
ENSBTAG00000008716SSB10076.722MGP_CAROLIEiJ_G0023629-10092.391Mus_caroli
ENSBTAG00000008716SSB10076.010ENSMUSG00000068882Ssb10092.391Mus_musculus
ENSBTAG00000008716SSB10075.772MGP_PahariEiJ_G0025081-10092.391Mus_pahari
ENSBTAG00000008716SSB10076.010MGP_SPRETEiJ_G0024551Ssb10092.391Mus_spretus
ENSBTAG00000008716SSB10095.556ENSMPUG00000000785SSB10095.556Mustela_putorius_furo
ENSBTAG00000008716SSB10089.286ENSMLUG00000016316SSB10089.286Myotis_lucifugus
ENSBTAG00000008716SSB9955.087ENSNBRG00000012661ssb10054.839Neolamprologus_brichardi
ENSBTAG00000008716SSB10067.734ENSNLEG00000028754-10067.734Nomascus_leucogenys
ENSBTAG00000008716SSB10094.321ENSNLEG00000004958SSB10094.321Nomascus_leucogenys
ENSBTAG00000008716SSB6187.500ENSMEUG00000001650-10087.500Notamacropus_eugenii
ENSBTAG00000008716SSB7269.310ENSOPRG00000008475-10073.103Ochotona_princeps
ENSBTAG00000008716SSB9388.360ENSODEG00000004202-10088.360Octodon_degus
ENSBTAG00000008716SSB9954.591ENSONIG00000008776ssb10054.342Oreochromis_niloticus
ENSBTAG00000008716SSB10083.210ENSOANG00000008543SSB10083.210Ornithorhynchus_anatinus
ENSBTAG00000008716SSB10094.074ENSOCUG00000010396SSB10094.074Oryctolagus_cuniculus
ENSBTAG00000008716SSB9958.272ENSORLG00000017208ssb10058.519Oryzias_latipes
ENSBTAG00000008716SSB9957.778ENSORLG00020022574ssb10058.025Oryzias_latipes_hni
ENSBTAG00000008716SSB9957.778ENSORLG00015016592ssb10058.025Oryzias_latipes_hsok
ENSBTAG00000008716SSB9858.250ENSOMEG00000003193ssb10059.158Oryzias_melastigma
ENSBTAG00000008716SSB10088.863ENSOGAG00000029768SSB10088.863Otolemur_garnettii
ENSBTAG00000008716SSB10097.778ENSOARG00000002906SSB10097.778Ovis_aries
ENSBTAG00000008716SSB9772.843ENSPPAG00000006189-9676.613Pan_paniscus
ENSBTAG00000008716SSB10093.627ENSPPAG00000042673SSB10093.627Pan_paniscus
ENSBTAG00000008716SSB10077.531ENSPPAG00000032427-10086.822Pan_paniscus
ENSBTAG00000008716SSB10094.581ENSPPRG00000006599SSB10094.581Panthera_pardus
ENSBTAG00000008716SSB10094.335ENSPTIG00000011021SSB9794.335Panthera_tigris_altaica
ENSBTAG00000008716SSB10093.627ENSPTRG00000012620SSB10093.627Pan_troglodytes
ENSBTAG00000008716SSB10073.333ENSPTRG00000042880-10073.333Pan_troglodytes
ENSBTAG00000008716SSB10067.160ENSPANG00000034126-10067.654Papio_anubis
ENSBTAG00000008716SSB9865.664ENSPANG00000031877-9565.664Papio_anubis
ENSBTAG00000008716SSB10094.074ENSPANG00000007440SSB10094.074Papio_anubis
ENSBTAG00000008716SSB9861.845ENSPKIG00000019325ssb9962.469Paramormyrops_kingsleyae
ENSBTAG00000008716SSB10076.773ENSPSIG00000002265SSB9376.773Pelodiscus_sinensis
ENSBTAG00000008716SSB8554.830ENSPMGG00000020075ssb9255.587Periophthalmus_magnuspinnatus
ENSBTAG00000008716SSB8149.394ENSPMAG00000002982ssb8947.792Petromyzon_marinus
ENSBTAG00000008716SSB10082.512ENSPCIG00000028591-10083.005Phascolarctos_cinereus
ENSBTAG00000008716SSB9957.778ENSPFOG00000009650ssb10058.025Poecilia_formosa
ENSBTAG00000008716SSB9957.284ENSPLAG00000020498ssb10057.778Poecilia_latipinna
ENSBTAG00000008716SSB9957.284ENSPMEG00000001051ssb10057.778Poecilia_mexicana
ENSBTAG00000008716SSB9357.937ENSPREG00000003708ssb9858.201Poecilia_reticulata
ENSBTAG00000008716SSB10094.321ENSPPYG00000012919SSB10094.321Pongo_abelii
ENSBTAG00000008716SSB9588.773ENSPCAG00000010276SSB10088.773Procavia_capensis
ENSBTAG00000008716SSB10083.210ENSPCOG00000023189-10083.210Propithecus_coquereli
ENSBTAG00000008716SSB10091.358ENSPCOG00000015741-10091.358Propithecus_coquereli
ENSBTAG00000008716SSB8896.045ENSPVAG00000006615SSB10096.045Pteropus_vampyrus
ENSBTAG00000008716SSB9954.839ENSPNYG00000006444ssb10054.591Pundamilia_nyererei
ENSBTAG00000008716SSB9856.158ENSPNAG00000011708ssb10057.282Pygocentrus_nattereri
ENSBTAG00000008716SSB10077.941ENSRNOG00000011606AABR07061825.110077.941Rattus_norvegicus
ENSBTAG00000008716SSB10077.435ENSRNOG00000007998Ssb10077.435Rattus_norvegicus
ENSBTAG00000008716SSB10078.293ENSRBIG00000041972SSB88100.000Rhinopithecus_bieti
ENSBTAG00000008716SSB9478.100ENSRBIG00000041232-9878.100Rhinopithecus_bieti
ENSBTAG00000008716SSB10068.227ENSRBIG00000029918-10068.227Rhinopithecus_bieti
ENSBTAG00000008716SSB8985.912ENSRBIG00000041608-9885.912Rhinopithecus_bieti
ENSBTAG00000008716SSB10078.079ENSRROG00000007149-10078.079Rhinopithecus_roxellana
ENSBTAG00000008716SSB9884.750ENSRROG00000034102-9884.673Rhinopithecus_roxellana
ENSBTAG00000008716SSB10094.321ENSRROG00000040346SSB10094.321Rhinopithecus_roxellana
ENSBTAG00000008716SSB9879.293ENSRROG00000031684-10079.293Rhinopithecus_roxellana
ENSBTAG00000008716SSB10094.321ENSSBOG00000027204SSB10094.321Saimiri_boliviensis_boliviensis
ENSBTAG00000008716SSB10080.542ENSSHAG00000018062SSB10083.005Sarcophilus_harrisii
ENSBTAG00000008716SSB9963.659ENSSFOG00015000550ssb10064.146Scleropages_formosus
ENSBTAG00000008716SSB9854.271ENSSMAG00000013885ssb9957.487Scophthalmus_maximus
ENSBTAG00000008716SSB9957.284ENSSDUG00000020117ssb10057.531Seriola_dumerili
ENSBTAG00000008716SSB9955.224ENSSLDG00000002525ssb10055.224Seriola_lalandi_dorsalis
ENSBTAG00000008716SSB9585.901ENSSARG00000007747SSB10085.901Sorex_araneus
ENSBTAG00000008716SSB10076.658ENSSPUG00000012112SSB10076.658Sphenodon_punctatus
ENSBTAG00000008716SSB9856.110ENSSPAG00000005696ssb10056.790Stegastes_partitus
ENSBTAG00000008716SSB9877.582ENSSSCG00000015938SSB9878.392Sus_scrofa
ENSBTAG00000008716SSB10074.817ENSTGUG00000007942SSB10075.550Taeniopygia_guttata
ENSBTAG00000008716SSB9957.320ENSTRUG00000017839ssb10058.416Takifugu_rubripes
ENSBTAG00000008716SSB9159.511ENSTNIG00000000915ssb10059.511Tetraodon_nigroviridis
ENSBTAG00000008716SSB83100.000ENSTBEG00000009056SSB82100.000Tupaia_belangeri
ENSBTAG00000008716SSB10095.320ENSTTRG00000002152SSB10095.320Tursiops_truncatus
ENSBTAG00000008716SSB9396.277ENSUAMG00000027833SSB9996.277Ursus_americanus
ENSBTAG00000008716SSB10095.074ENSUMAG00000013907SSB10095.074Ursus_maritimus
ENSBTAG00000008716SSB10095.050ENSVPAG00000007183SSB10095.050Vicugna_pacos
ENSBTAG00000008716SSB10094.581ENSVVUG00000016573SSB7894.581Vulpes_vulpes
ENSBTAG00000008716SSB9960.448ENSXETG00000025402ssb9262.283Xenopus_tropicalis
ENSBTAG00000008716SSB9355.438ENSXCOG00000019109ssb9855.703Xiphophorus_couchianus
ENSBTAG00000008716SSB9956.158ENSXMAG00000004888ssb10056.757Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000049tRNA binding-IEAFunction
GO:0001682tRNA 5'-leader removal-IEAProcess
GO:0005634nucleus-IEAComponent
GO:0005737cytoplasm-IEAComponent
GO:0006409tRNA export from nucleus-IEAProcess
GO:0008266poly(U) RNA binding-IEAFunction
GO:0042780tRNA 3'-end processing-IEAProcess
GO:0071045nuclear histone mRNA catabolic process-IEAProcess
GO:0075522IRES-dependent viral translational initiation-IEAProcess
GO:1903608protein localization to cytoplasmic stress granule-IEAProcess
GO:1990825sequence-specific mRNA binding-IEAFunction
GO:1990904ribonucleoprotein complex-IEAComponent

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