EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000008985 (Gene tree)
Gene ID: -
Gene Symbol: PCBP1
Alias: HNRPE1|HNRPX|hnRNP-E1|hnRNP-X
Full Name: Poly(rC)-binding protein 1
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 18710 bases
Position: chr11:68411350-68430059
Accession: Q5E9A3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000049383	KH_1	PF00013.29	1.9e-45	1	3
ENSBTAP00000049383	KH_1	PF00013.29	1.9e-45	2	3
ENSBTAP00000049383	KH_1	PF00013.29	1.9e-45	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000011824	PCBP1-201	3044	-	ENSBTAP00000049383	328 (aa)	-	Q5E9A3

Gene Model

Click here to download ENSBTAG00000008985's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000008985's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000008985	PCBP1	98	79.012	ENSBTAG00000020757	PCBP2	90	79.012
ENSBTAG00000008985	PCBP1	98	52.778	ENSBTAG00000018622	PCBP4	85	50.617
ENSBTAG00000008985	PCBP1	60	32.143	ENSBTAG00000007666	IGF2BP2	72	33.696
ENSBTAG00000008985	PCBP1	98	67.771	ENSBTAG00000030775	PCBP3	94	67.771

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000008985	PCBP1	99	100.000	ENSG00000169564	PCBP1	91	100.000	Homo_sapiens
ENSBTAG00000008985	PCBP1	99	96.914	ENSAMEG00000016094	PCBP1	91	96.914	Ailuropoda_melanoleuca
ENSBTAG00000008985	PCBP1	99	87.963	ENSANAG00000023938	-	91	87.963	Aotus_nancymaae
ENSBTAG00000008985	PCBP1	99	87.346	ENSANAG00000026077	-	90	87.346	Aotus_nancymaae
ENSBTAG00000008985	PCBP1	87	86.268	ENSANAG00000027108	-	89	86.268	Aotus_nancymaae
ENSBTAG00000008985	PCBP1	76	95.200	ENSANAG00000031745	-	88	95.200	Aotus_nancymaae
ENSBTAG00000008985	PCBP1	77	94.422	ENSANAG00000019364	-	89	94.422	Aotus_nancymaae
ENSBTAG00000008985	PCBP1	77	91.235	ENSANAG00000022494	-	88	91.235	Aotus_nancymaae
ENSBTAG00000008985	PCBP1	99	95.988	ENSANAG00000026989	-	92	95.988	Aotus_nancymaae
ENSBTAG00000008985	PCBP1	99	84.259	ENSANAG00000033377	-	90	84.259	Aotus_nancymaae
ENSBTAG00000008985	PCBP1	99	94.136	ENSCJAG00000038388	-	86	94.136	Callithrix_jacchus
ENSBTAG00000008985	PCBP1	99	99.691	ENSCAFG00000003326	PCBP1	91	99.691	Canis_familiaris
ENSBTAG00000008985	PCBP1	99	100.000	ENSCHIG00000007923	PCBP1	91	100.000	Capra_hircus
ENSBTAG00000008985	PCBP1	99	99.383	ENSTSYG00000027848	PCBP1	91	99.383	Carlito_syrichta
ENSBTAG00000008985	PCBP1	99	100.000	ENSCPOG00000013511	PCBP1	91	100.000	Cavia_porcellus
ENSBTAG00000008985	PCBP1	99	100.000	ENSCCAG00000019842	-	91	100.000	Cebus_capucinus
ENSBTAG00000008985	PCBP1	99	91.975	ENSCCAG00000029186	-	90	91.975	Cebus_capucinus
ENSBTAG00000008985	PCBP1	99	100.000	ENSCATG00000015029	PCBP1	91	100.000	Cercocebus_atys
ENSBTAG00000008985	PCBP1	99	99.383	ENSCLAG00000017909	PCBP1	91	99.383	Chinchilla_lanigera
ENSBTAG00000008985	PCBP1	99	100.000	ENSCSAG00000019441	PCBP1	91	100.000	Chlorocebus_sabaeus
ENSBTAG00000008985	PCBP1	68	85.650	ENSCANG00000033810	-	78	85.650	Colobus_angolensis_palliatus
ENSBTAG00000008985	PCBP1	99	100.000	ENSCANG00000018039	-	91	100.000	Colobus_angolensis_palliatus
ENSBTAG00000008985	PCBP1	99	88.889	ENSCANG00000032470	-	85	88.889	Colobus_angolensis_palliatus
ENSBTAG00000008985	PCBP1	99	100.000	ENSCGRG00001015078	Pcbp1	91	100.000	Cricetulus_griseus_chok1gshd
ENSBTAG00000008985	PCBP1	99	100.000	ENSCGRG00000018899	Pcbp1	91	100.000	Cricetulus_griseus_crigri
ENSBTAG00000008985	PCBP1	77	99.605	ENSDNOG00000036372	PCBP1	88	99.605	Dasypus_novemcinctus
ENSBTAG00000008985	PCBP1	99	100.000	ENSDORG00000008216	Pcbp1	91	100.000	Dipodomys_ordii
ENSBTAG00000008985	PCBP1	99	100.000	ENSFCAG00000022238	PCBP1	91	100.000	Felis_catus
ENSBTAG00000008985	PCBP1	99	99.691	ENSFDAG00000019637	PCBP1	91	99.691	Fukomys_damarensis
ENSBTAG00000008985	PCBP1	99	100.000	ENSGGOG00000028130	PCBP1	91	100.000	Gorilla_gorilla
ENSBTAG00000008985	PCBP1	99	97.840	ENSHGLG00000020243	-	91	97.840	Heterocephalus_glaber_female
ENSBTAG00000008985	PCBP1	99	99.691	ENSHGLG00000020345	Pcbp1	91	99.691	Heterocephalus_glaber_female
ENSBTAG00000008985	PCBP1	99	99.691	ENSHGLG00100019620	-	91	99.691	Heterocephalus_glaber_male
ENSBTAG00000008985	PCBP1	99	99.691	ENSHGLG00100019761	Pcbp1	91	99.691	Heterocephalus_glaber_male
ENSBTAG00000008985	PCBP1	99	100.000	ENSSTOG00000026002	PCBP1	91	100.000	Ictidomys_tridecemlineatus
ENSBTAG00000008985	PCBP1	99	100.000	ENSJJAG00000000737	Pcbp1	91	100.000	Jaculus_jaculus
ENSBTAG00000008985	PCBP1	93	87.213	ENSMFAG00000003400	PCBP1	89	87.213	Macaca_fascicularis
ENSBTAG00000008985	PCBP1	99	100.000	ENSMMUG00000038295	PCBP1	91	100.000	Macaca_mulatta
ENSBTAG00000008985	PCBP1	99	100.000	ENSMNEG00000002934	PCBP1	91	100.000	Macaca_nemestrina
ENSBTAG00000008985	PCBP1	99	100.000	ENSMLEG00000027389	PCBP1	91	100.000	Mandrillus_leucophaeus
ENSBTAG00000008985	PCBP1	99	99.691	ENSMAUG00000009843	Pcbp1	91	99.691	Mesocricetus_auratus
ENSBTAG00000008985	PCBP1	99	100.000	ENSMICG00000038221	PCBP1	91	100.000	Microcebus_murinus
ENSBTAG00000008985	PCBP1	99	100.000	ENSMOCG00000008102	Pcbp1	91	100.000	Microtus_ochrogaster
ENSBTAG00000008985	PCBP1	99	100.000	MGP_CAROLIEiJ_G0028598	Pcbp1	91	100.000	Mus_caroli
ENSBTAG00000008985	PCBP1	99	100.000	ENSMUSG00000051695	Pcbp1	91	100.000	Mus_musculus
ENSBTAG00000008985	PCBP1	99	100.000	MGP_PahariEiJ_G0022335	Pcbp1	91	100.000	Mus_pahari
ENSBTAG00000008985	PCBP1	99	100.000	MGP_SPRETEiJ_G0029609	Pcbp1	91	100.000	Mus_spretus
ENSBTAG00000008985	PCBP1	99	96.914	ENSMPUG00000007175	PCBP1	91	96.914	Mustela_putorius_furo
ENSBTAG00000008985	PCBP1	99	100.000	ENSMLUG00000014173	PCBP1	91	100.000	Myotis_lucifugus
ENSBTAG00000008985	PCBP1	99	100.000	ENSNGAG00000011957	-	91	100.000	Nannospalax_galili
ENSBTAG00000008985	PCBP1	99	100.000	ENSNGAG00000014909	-	91	100.000	Nannospalax_galili
ENSBTAG00000008985	PCBP1	99	100.000	ENSNLEG00000018722	PCBP1	91	100.000	Nomascus_leucogenys
ENSBTAG00000008985	PCBP1	99	81.790	ENSODEG00000000263	PCBP1	91	81.790	Octodon_degus
ENSBTAG00000008985	PCBP1	99	100.000	ENSOCUG00000003634	PCBP1	91	100.000	Oryctolagus_cuniculus
ENSBTAG00000008985	PCBP1	99	96.914	ENSOGAG00000028946	PCBP1	91	96.914	Otolemur_garnettii
ENSBTAG00000008985	PCBP1	99	100.000	ENSOARG00000019516	PCBP1	91	100.000	Ovis_aries
ENSBTAG00000008985	PCBP1	99	97.840	ENSPPAG00000036116	PCBP1	91	98.462	Pan_paniscus
ENSBTAG00000008985	PCBP1	99	100.000	ENSPPRG00000020533	PCBP1	91	100.000	Panthera_pardus
ENSBTAG00000008985	PCBP1	99	100.000	ENSPTIG00000007318	PCBP1	91	100.000	Panthera_tigris_altaica
ENSBTAG00000008985	PCBP1	99	100.000	ENSPTRG00000012025	PCBP1	91	100.000	Pan_troglodytes
ENSBTAG00000008985	PCBP1	99	100.000	ENSPANG00000011314	PCBP1	91	100.000	Papio_anubis
ENSBTAG00000008985	PCBP1	99	100.000	ENSPPYG00000012328	PCBP1	91	100.000	Pongo_abelii
ENSBTAG00000008985	PCBP1	99	100.000	ENSPCOG00000026934	PCBP1	91	100.000	Propithecus_coquereli
ENSBTAG00000008985	PCBP1	99	98.765	ENSRROG00000012514	-	98	98.765	Rhinopithecus_roxellana
ENSBTAG00000008985	PCBP1	99	99.074	ENSRROG00000009684	-	86	99.074	Rhinopithecus_roxellana
ENSBTAG00000008985	PCBP1	99	82.099	ENSSBOG00000035309	-	85	82.099	Saimiri_boliviensis_boliviensis
ENSBTAG00000008985	PCBP1	99	99.691	ENSSSCG00000027224	PCBP1	91	99.691	Sus_scrofa
ENSBTAG00000008985	PCBP1	98	99.690	ENSVVUG00000028033	PCBP1	99	99.690	Vulpes_vulpes