EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000009308 (Gene tree)
Gene ID: 537918
Gene Symbol: TDRD3
Alias: -
Full Name: Bos taurus tudor domain containing 3 (TDRD3)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 226683 bases
Position: chr12:1586960-1813642
Accession: NM_001046426
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000060412	TUDOR	PF00567.24	1.3e-10	1	1
ENSBTAP00000070940	TUDOR	PF00567.24	1.4e-10	1	1
ENSBTAP00000012261	TUDOR	PF00567.24	1.5e-10	1	1
ENSBTAP00000072125	TUDOR	PF00567.24	1.5e-10	1	1
ENSBTAP00000066670	TUDOR	PF00567.24	1.5e-10	1	1
ENSBTAP00000066670	SMN	PF06003.12	2.1e-08	1	1
ENSBTAP00000012261	SMN	PF06003.12	2.2e-08	1	1
ENSBTAP00000072125	SMN	PF06003.12	2.4e-08	1	1
ENSBTAP00000060412	SMN	PF06003.12	2.4e-08	1	1
ENSBTAP00000070940	SMN	PF06003.12	4.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000086142	-	2466	XM_005213542	ENSBTAP00000066670	744 (aa)	XP_005213599	UPI000D538700
ENSBTAT00000067177	-	2325	-	ENSBTAP00000070940	697 (aa)	-	-
ENSBTAT00000075678	-	2613	-	ENSBTAP00000060412	651 (aa)	-	-
ENSBTAT00000068944	-	2148	-	ENSBTAP00000072125	715 (aa)	-	-
ENSBTAT00000012261	-	2462	-	ENSBTAP00000012261	722 (aa)	-	G3X6R8

Gene Model

Click here to download ENSBTAG00000009308's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000009308's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000009308	TDRD3	100	91.532	ENSG00000083544	TDRD3	100	96.899	Homo_sapiens
ENSBTAG00000009308	TDRD3	99	48.628	ENSAPOG00000016078	tdrd3	99	49.007	Acanthochromis_polyacanthus
ENSBTAG00000009308	TDRD3	100	92.496	ENSAMEG00000000082	TDRD3	100	91.689	Ailuropoda_melanoleuca
ENSBTAG00000009308	TDRD3	99	49.250	ENSACIG00000023900	tdrd3	99	49.748	Amphilophus_citrinellus
ENSBTAG00000009308	TDRD3	99	49.628	ENSAOCG00000001410	tdrd3	99	49.380	Amphiprion_ocellaris
ENSBTAG00000009308	TDRD3	100	48.046	ENSAPEG00000022810	tdrd3	99	47.782	Amphiprion_percula
ENSBTAG00000009308	TDRD3	99	49.684	ENSATEG00000014570	tdrd3	99	50.126	Anabas_testudineus
ENSBTAG00000009308	TDRD3	100	75.038	ENSAPLG00000014316	TDRD3	100	76.100	Anas_platyrhynchos
ENSBTAG00000009308	TDRD3	100	71.946	ENSACAG00000004923	TDRD3	100	71.946	Anolis_carolinensis
ENSBTAG00000009308	TDRD3	100	89.094	ENSANAG00000030827	-	98	90.000	Aotus_nancymaae
ENSBTAG00000009308	TDRD3	89	78.522	ENSANAG00000027927	-	98	74.919	Aotus_nancymaae
ENSBTAG00000009308	TDRD3	99	48.872	ENSACLG00000022962	tdrd3	99	49.873	Astatotilapia_calliptera
ENSBTAG00000009308	TDRD3	99	50.750	ENSAMXG00000006847	tdrd3	99	50.939	Astyanax_mexicanus
ENSBTAG00000009308	TDRD3	100	91.129	ENSCJAG00000003853	TDRD3	100	91.129	Callithrix_jacchus
ENSBTAG00000009308	TDRD3	100	90.979	ENSCAFG00000023746	-	98	91.814	Canis_familiaris
ENSBTAG00000009308	TDRD3	76	85.455	ENSCAFG00020015271	-	94	85.455	Canis_lupus_dingo
ENSBTAG00000009308	TDRD3	100	92.012	ENSCAFG00020018076	-	99	92.740	Canis_lupus_dingo
ENSBTAG00000009308	TDRD3	100	97.043	ENSCHIG00000020019	TDRD3	100	97.043	Capra_hircus
ENSBTAG00000009308	TDRD3	100	88.940	ENSTSYG00000002254	TDRD3	100	90.069	Carlito_syrichta
ENSBTAG00000009308	TDRD3	100	76.190	ENSCAPG00000012313	TDRD3	98	77.825	Cavia_aperea
ENSBTAG00000009308	TDRD3	100	81.611	ENSCPOG00000010437	TDRD3	100	81.611	Cavia_porcellus
ENSBTAG00000009308	TDRD3	100	91.129	ENSCCAG00000023831	TDRD3	100	91.129	Cebus_capucinus
ENSBTAG00000009308	TDRD3	100	90.457	ENSCATG00000029498	TDRD3	100	90.457	Cercocebus_atys
ENSBTAG00000009308	TDRD3	100	87.865	ENSCLAG00000002654	TDRD3	100	88.646	Chinchilla_lanigera
ENSBTAG00000009308	TDRD3	100	90.860	ENSCSAG00000017640	TDRD3	100	90.860	Chlorocebus_sabaeus
ENSBTAG00000009308	TDRD3	81	94.425	ENSCHOG00000012825	TDRD3	86	94.425	Choloepus_hoffmanni
ENSBTAG00000009308	TDRD3	100	75.829	ENSCPBG00000026646	TDRD3	100	75.829	Chrysemys_picta_bellii
ENSBTAG00000009308	TDRD3	100	89.708	ENSCANG00000034303	TDRD3	100	89.555	Colobus_angolensis_palliatus
ENSBTAG00000009308	TDRD3	100	84.564	ENSCGRG00001011297	Tdrd3	100	84.564	Cricetulus_griseus_chok1gshd
ENSBTAG00000009308	TDRD3	100	83.742	ENSCGRG00000015535	-	100	83.742	Cricetulus_griseus_crigri
ENSBTAG00000009308	TDRD3	99	47.519	ENSCSEG00000000670	tdrd3	99	48.811	Cynoglossus_semilaevis
ENSBTAG00000009308	TDRD3	100	47.110	ENSCVAG00000015641	tdrd3	100	49.393	Cyprinodon_variegatus
ENSBTAG00000009308	TDRD3	99	51.915	ENSDARG00000025421	tdrd3	99	52.180	Danio_rerio
ENSBTAG00000009308	TDRD3	100	87.711	ENSDNOG00000002011	TDRD3	98	88.904	Dasypus_novemcinctus
ENSBTAG00000009308	TDRD3	100	88.038	ENSDORG00000008714	Tdrd3	100	88.038	Dipodomys_ordii
ENSBTAG00000009308	TDRD3	57	48.214	FBgn0036450	Tdrd3	53	36.657	Drosophila_melanogaster
ENSBTAG00000009308	TDRD3	65	62.069	ENSEBUG00000011812	tdrd3	68	62.069	Eptatretus_burgeri
ENSBTAG00000009308	TDRD3	100	92.876	ENSEASG00005015575	TDRD3	100	92.876	Equus_asinus_asinus
ENSBTAG00000009308	TDRD3	100	93.145	ENSECAG00000000550	TDRD3	100	93.145	Equus_caballus
ENSBTAG00000009308	TDRD3	100	81.106	ENSEEUG00000002192	TDRD3	89	94.444	Erinaceus_europaeus
ENSBTAG00000009308	TDRD3	73	69.456	ENSELUG00000000994	tdrd3	66	55.303	Esox_lucius
ENSBTAG00000009308	TDRD3	100	92.876	ENSFCAG00000022126	TDRD3	100	92.876	Felis_catus
ENSBTAG00000009308	TDRD3	99	74.966	ENSFALG00000007927	TDRD3	99	75.101	Ficedula_albicollis
ENSBTAG00000009308	TDRD3	100	88.172	ENSFDAG00000011552	TDRD3	100	88.919	Fukomys_damarensis
ENSBTAG00000009308	TDRD3	99	48.734	ENSFHEG00000009513	tdrd3	99	48.734	Fundulus_heteroclitus
ENSBTAG00000009308	TDRD3	64	60.417	ENSGMOG00000005733	tdrd3	74	60.417	Gadus_morhua
ENSBTAG00000009308	TDRD3	100	75.737	ENSGALG00000016936	TDRD3	100	75.737	Gallus_gallus
ENSBTAG00000009308	TDRD3	99	48.683	ENSGAFG00000012013	tdrd3	99	48.936	Gambusia_affinis
ENSBTAG00000009308	TDRD3	99	43.726	ENSGACG00000015264	tdrd3	99	45.711	Gasterosteus_aculeatus
ENSBTAG00000009308	TDRD3	100	75.469	ENSGAGG00000003173	TDRD3	100	75.871	Gopherus_agassizii
ENSBTAG00000009308	TDRD3	100	90.783	ENSGGOG00000025560	TDRD3	100	91.644	Gorilla_gorilla
ENSBTAG00000009308	TDRD3	99	48.872	ENSHBUG00000007081	tdrd3	99	49.873	Haplochromis_burtoni
ENSBTAG00000009308	TDRD3	100	73.272	ENSHGLG00000010652	-	99	73.626	Heterocephalus_glaber_female
ENSBTAG00000009308	TDRD3	100	89.664	ENSHGLG00000018707	-	100	89.664	Heterocephalus_glaber_female
ENSBTAG00000009308	TDRD3	99	79.385	ENSHGLG00000009668	-	100	78.562	Heterocephalus_glaber_female
ENSBTAG00000009308	TDRD3	100	80.675	ENSHGLG00000014119	-	100	80.675	Heterocephalus_glaber_female
ENSBTAG00000009308	TDRD3	88	92.308	ENSHGLG00100017738	-	100	92.308	Heterocephalus_glaber_male
ENSBTAG00000009308	TDRD3	100	88.940	ENSHGLG00100010966	-	100	89.740	Heterocephalus_glaber_male
ENSBTAG00000009308	TDRD3	99	44.602	ENSHCOG00000002157	tdrd3	99	45.571	Hippocampus_comes
ENSBTAG00000009308	TDRD3	99	47.126	ENSIPUG00000012320	tdrd3	99	51.210	Ictalurus_punctatus
ENSBTAG00000009308	TDRD3	100	88.786	ENSSTOG00000028945	-	100	90.000	Ictidomys_tridecemlineatus
ENSBTAG00000009308	TDRD3	100	84.969	ENSJJAG00000023665	Tdrd3	97	85.593	Jaculus_jaculus
ENSBTAG00000009308	TDRD3	99	48.744	ENSKMAG00000021849	tdrd3	99	48.744	Kryptolebias_marmoratus
ENSBTAG00000009308	TDRD3	93	46.842	ENSLBEG00000011777	tdrd3	99	47.638	Labrus_bergylta
ENSBTAG00000009308	TDRD3	99	63.624	ENSLACG00000001412	TDRD3	99	63.624	Latimeria_chalumnae
ENSBTAG00000009308	TDRD3	99	59.091	ENSLOCG00000004652	tdrd3	99	59.091	Lepisosteus_oculatus
ENSBTAG00000009308	TDRD3	78	87.352	ENSLAFG00000002705	TDRD3	100	87.352	Loxodonta_africana
ENSBTAG00000009308	TDRD3	100	90.323	ENSMFAG00000007606	TDRD3	100	90.323	Macaca_fascicularis
ENSBTAG00000009308	TDRD3	100	90.323	ENSMMUG00000007169	TDRD3	100	90.323	Macaca_mulatta
ENSBTAG00000009308	TDRD3	100	90.054	ENSMNEG00000002038	TDRD3	100	90.054	Macaca_nemestrina
ENSBTAG00000009308	TDRD3	62	86.914	ENSMLEG00000039737	TDRD3	100	86.914	Mandrillus_leucophaeus
ENSBTAG00000009308	TDRD3	99	48.489	ENSMAMG00000003998	tdrd3	99	48.992	Mastacembelus_armatus
ENSBTAG00000009308	TDRD3	99	48.872	ENSMZEG00005004551	tdrd3	99	49.873	Maylandia_zebra
ENSBTAG00000009308	TDRD3	100	74.119	ENSMGAG00000014961	TDRD3	100	75.000	Meleagris_gallopavo
ENSBTAG00000009308	TDRD3	100	86.846	ENSMAUG00000012562	Tdrd3	100	86.846	Mesocricetus_auratus
ENSBTAG00000009308	TDRD3	100	91.129	ENSMICG00000009982	TDRD3	100	91.129	Microcebus_murinus
ENSBTAG00000009308	TDRD3	100	86.694	ENSMOCG00000012962	Tdrd3	100	86.694	Microtus_ochrogaster
ENSBTAG00000009308	TDRD3	99	49.317	ENSMMOG00000018156	tdrd3	99	49.317	Mola_mola
ENSBTAG00000009308	TDRD3	94	69.120	ENSMODG00000006316	TDRD3	100	69.120	Monodelphis_domestica
ENSBTAG00000009308	TDRD3	100	47.746	ENSMALG00000015327	tdrd3	99	48.892	Monopterus_albus
ENSBTAG00000009308	TDRD3	100	84.005	MGP_CAROLIEiJ_G0019551	Tdrd3	100	84.005	Mus_caroli
ENSBTAG00000009308	TDRD3	100	83.199	ENSMUSG00000022019	Tdrd3	100	83.199	Mus_musculus
ENSBTAG00000009308	TDRD3	100	84.812	MGP_PahariEiJ_G0030569	Tdrd3	100	84.812	Mus_pahari
ENSBTAG00000009308	TDRD3	100	83.737	MGP_SPRETEiJ_G0020448	Tdrd3	100	83.737	Mus_spretus
ENSBTAG00000009308	TDRD3	97	90.779	ENSMPUG00000009630	TDRD3	91	90.779	Mustela_putorius_furo
ENSBTAG00000009308	TDRD3	95	89.912	ENSMLUG00000000235	TDRD3	99	89.912	Myotis_lucifugus
ENSBTAG00000009308	TDRD3	100	87.634	ENSNGAG00000004523	Tdrd3	100	87.634	Nannospalax_galili
ENSBTAG00000009308	TDRD3	99	47.089	ENSNBRG00000018789	tdrd3	99	49.435	Neolamprologus_brichardi
ENSBTAG00000009308	TDRD3	100	90.457	ENSNLEG00000015920	TDRD3	100	90.457	Nomascus_leucogenys
ENSBTAG00000009308	TDRD3	100	69.325	ENSMEUG00000010114	TDRD3	100	69.325	Notamacropus_eugenii
ENSBTAG00000009308	TDRD3	100	79.877	ENSOPRG00000007868	TDRD3	100	79.877	Ochotona_princeps
ENSBTAG00000009308	TDRD3	100	72.504	ENSODEG00000014559	-	100	72.703	Octodon_degus
ENSBTAG00000009308	TDRD3	100	85.561	ENSODEG00000000576	-	99	85.484	Octodon_degus
ENSBTAG00000009308	TDRD3	98	50.522	ENSONIG00000003233	tdrd3	98	51.178	Oreochromis_niloticus
ENSBTAG00000009308	TDRD3	57	71.003	ENSOANG00000011775	-	99	71.003	Ornithorhynchus_anatinus
ENSBTAG00000009308	TDRD3	100	91.263	ENSOCUG00000014261	TDRD3	100	91.263	Oryctolagus_cuniculus
ENSBTAG00000009308	TDRD3	99	49.622	ENSORLG00000004502	tdrd3	99	50.630	Oryzias_latipes
ENSBTAG00000009308	TDRD3	98	48.505	ENSORLG00020017271	tdrd3	100	49.351	Oryzias_latipes_hni
ENSBTAG00000009308	TDRD3	99	49.684	ENSORLG00015015519	tdrd3	99	49.937	Oryzias_latipes_hsok
ENSBTAG00000009308	TDRD3	99	49.619	ENSOMEG00000015668	tdrd3	99	50.948	Oryzias_melastigma
ENSBTAG00000009308	TDRD3	100	89.785	ENSOGAG00000005898	TDRD3	100	89.785	Otolemur_garnettii
ENSBTAG00000009308	TDRD3	100	96.774	ENSOARG00000006244	TDRD3	99	97.123	Ovis_aries
ENSBTAG00000009308	TDRD3	100	90.860	ENSPPAG00000010477	TDRD3	100	90.860	Pan_paniscus
ENSBTAG00000009308	TDRD3	100	92.627	ENSPPRG00000008512	TDRD3	100	93.151	Panthera_pardus
ENSBTAG00000009308	TDRD3	100	92.320	ENSPTIG00000002537	TDRD3	100	92.877	Panthera_tigris_altaica
ENSBTAG00000009308	TDRD3	100	90.995	ENSPTRG00000005918	TDRD3	100	91.448	Pan_troglodytes
ENSBTAG00000009308	TDRD3	100	90.323	ENSPANG00000019138	TDRD3	100	90.323	Papio_anubis
ENSBTAG00000009308	TDRD3	99	48.005	ENSPKIG00000008894	tdrd3	99	48.425	Paramormyrops_kingsleyae
ENSBTAG00000009308	TDRD3	100	74.732	ENSPSIG00000013821	TDRD3	100	75.191	Pelodiscus_sinensis
ENSBTAG00000009308	TDRD3	99	48.724	ENSPMGG00000015263	tdrd3	99	49.433	Periophthalmus_magnuspinnatus
ENSBTAG00000009308	TDRD3	100	85.081	ENSPEMG00000004287	Tdrd3	100	85.081	Peromyscus_maniculatus_bairdii
ENSBTAG00000009308	TDRD3	100	81.769	ENSPCIG00000011476	-	100	81.769	Phascolarctos_cinereus
ENSBTAG00000009308	TDRD3	99	49.299	ENSPFOG00000012450	tdrd3	99	49.555	Poecilia_formosa
ENSBTAG00000009308	TDRD3	100	46.414	ENSPLAG00000016397	tdrd3	97	47.844	Poecilia_latipinna
ENSBTAG00000009308	TDRD3	100	46.610	ENSPMEG00000019048	tdrd3	99	47.773	Poecilia_mexicana
ENSBTAG00000009308	TDRD3	99	48.875	ENSPREG00000021145	tdrd3	99	49.252	Poecilia_reticulata
ENSBTAG00000009308	TDRD3	100	90.860	ENSPPYG00000005401	TDRD3	100	90.860	Pongo_abelii
ENSBTAG00000009308	TDRD3	100	81.720	ENSPCAG00000014959	TDRD3	100	81.720	Procavia_capensis
ENSBTAG00000009308	TDRD3	86	91.429	ENSPCOG00000019937	TDRD3	96	95.833	Propithecus_coquereli
ENSBTAG00000009308	TDRD3	100	90.630	ENSPVAG00000010549	TDRD3	100	90.630	Pteropus_vampyrus
ENSBTAG00000009308	TDRD3	99	48.747	ENSPNYG00000001569	tdrd3	99	49.623	Pundamilia_nyererei
ENSBTAG00000009308	TDRD3	82	60.124	ENSPNAG00000026219	tdrd3	79	60.124	Pygocentrus_nattereri
ENSBTAG00000009308	TDRD3	100	81.567	ENSRNOG00000009034	Tdrd3	100	81.567	Rattus_norvegicus
ENSBTAG00000009308	TDRD3	100	87.423	ENSRBIG00000031218	TDRD3	99	88.108	Rhinopithecus_bieti
ENSBTAG00000009308	TDRD3	100	89.708	ENSRROG00000044516	TDRD3	100	89.708	Rhinopithecus_roxellana
ENSBTAG00000009308	TDRD3	100	91.551	ENSSBOG00000022790	TDRD3	100	92.192	Saimiri_boliviensis_boliviensis
ENSBTAG00000009308	TDRD3	98	78.610	ENSSHAG00000011994	TDRD3	100	78.610	Sarcophilus_harrisii
ENSBTAG00000009308	TDRD3	99	48.362	ENSSFOG00015005175	tdrd3	96	48.889	Scleropages_formosus
ENSBTAG00000009308	TDRD3	94	46.475	ENSSMAG00000011677	tdrd3	99	46.762	Scophthalmus_maximus
ENSBTAG00000009308	TDRD3	99	48.934	ENSSDUG00000004594	tdrd3	99	49.372	Seriola_dumerili
ENSBTAG00000009308	TDRD3	98	46.632	ENSSLDG00000002918	tdrd3	98	47.013	Seriola_lalandi_dorsalis
ENSBTAG00000009308	TDRD3	100	88.037	ENSSARG00000003028	TDRD3	100	88.037	Sorex_araneus
ENSBTAG00000009308	TDRD3	99	75.908	ENSSPUG00000001191	TDRD3	99	76.312	Sphenodon_punctatus
ENSBTAG00000009308	TDRD3	99	49.504	ENSSPAG00000005342	tdrd3	99	49.628	Stegastes_partitus
ENSBTAG00000009308	TDRD3	100	92.215	ENSSSCG00000009449	TDRD3	100	92.215	Sus_scrofa
ENSBTAG00000009308	TDRD3	100	75.737	ENSTGUG00000012476	-	100	75.871	Taeniopygia_guttata
ENSBTAG00000009308	TDRD3	94	46.933	ENSTRUG00000017194	tdrd3	94	47.200	Takifugu_rubripes
ENSBTAG00000009308	TDRD3	99	49.415	ENSTNIG00000005230	tdrd3	99	49.415	Tetraodon_nigroviridis
ENSBTAG00000009308	TDRD3	99	86.923	ENSTTRG00000010071	TDRD3	99	86.923	Tursiops_truncatus
ENSBTAG00000009308	TDRD3	100	92.934	ENSUAMG00000017369	-	98	93.235	Ursus_americanus
ENSBTAG00000009308	TDRD3	100	93.088	ENSUMAG00000014526	TDRD3	100	93.353	Ursus_maritimus
ENSBTAG00000009308	TDRD3	100	93.241	ENSVPAG00000011763	TDRD3	100	93.241	Vicugna_pacos
ENSBTAG00000009308	TDRD3	100	92.012	ENSVVUG00000029140	TDRD3	97	92.341	Vulpes_vulpes
ENSBTAG00000009308	TDRD3	100	47.149	ENSXCOG00000001875	tdrd3	97	49.375	Xiphophorus_couchianus
ENSBTAG00000009308	TDRD3	99	49.005	ENSXMAG00000005103	tdrd3	99	49.256	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003682	chromatin binding	-	ISS	Function
GO:0003713	transcription coactivator activity	-	ISS	Function
GO:0005634	nucleus	-	ISS	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0006325	chromatin organization	-	IEA	Process
GO:0035064	methylated histone binding	-	ISS	Function
GO:0035145	exon-exon junction complex	-	ISS	Component
GO:1903508	positive regulation of nucleic acid-templated transcription	-	IEA	Process