EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000009518 (Gene tree)
Gene ID: 514579
Gene Symbol: ALKBH3
Alias: -
Full Name: Bos taurus alkB homolog 3%2C alpha-ketoglutaratedependent dioxygenase (ALKBH3)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 43903 bases
Position: chr15:73974959-74018861
Accession: NM_001037602
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000069374	2OG-FeII_Oxy_2	PF13532.6	1.7e-27	1	1
ENSBTAP00000012522	2OG-FeII_Oxy_2	PF13532.6	1.8e-27	1	1
ENSBTAP00000062294	2OG-FeII_Oxy_2	PF13532.6	1.8e-27	1	1
ENSBTAP00000062402	2OG-FeII_Oxy_2	PF13532.6	1.8e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000069704	-	3389	-	ENSBTAP00000062294	286 (aa)	XP_005216512	UPI000057F514
ENSBTAT00000012522	-	1273	-	ENSBTAP00000012522	286 (aa)	XP_005216512	Q32L00
ENSBTAT00000077644	-	3747	-	ENSBTAP00000062402	286 (aa)	XP_005216512	UPI000057F514
ENSBTAT00000071776	-	801	-	ENSBTAP00000069374	266 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000009518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000009518's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000009518	ALKBH3	68	36.508	ENSBTAG00000019846	ALKBH2	67	36.508

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000009518	ALKBH3	100	87.063	ENSG00000166199	ALKBH3	100	87.063	Homo_sapiens
ENSBTAG00000009518	ALKBH3	99	55.556	ENSAPOG00000008495	alkbh3	95	55.556	Acanthochromis_polyacanthus
ENSBTAG00000009518	ALKBH3	100	87.762	ENSAMEG00000004842	ALKBH3	97	87.762	Ailuropoda_melanoleuca
ENSBTAG00000009518	ALKBH3	98	54.643	ENSACIG00000011887	alkbh3	100	54.643	Amphilophus_citrinellus
ENSBTAG00000009518	ALKBH3	99	55.903	ENSAOCG00000023500	alkbh3	95	55.903	Amphiprion_ocellaris
ENSBTAG00000009518	ALKBH3	99	55.903	ENSAPEG00000011723	alkbh3	95	55.903	Amphiprion_percula
ENSBTAG00000009518	ALKBH3	99	55.594	ENSATEG00000021785	alkbh3	95	55.594	Anabas_testudineus
ENSBTAG00000009518	ALKBH3	99	51.163	ENSACAG00000000855	ALKBH3	99	51.827	Anolis_carolinensis
ENSBTAG00000009518	ALKBH3	100	84.429	ENSANAG00000033941	ALKBH3	100	84.429	Aotus_nancymaae
ENSBTAG00000009518	ALKBH3	99	54.737	ENSACLG00000023226	alkbh3	96	54.737	Astatotilapia_calliptera
ENSBTAG00000009518	ALKBH3	98	57.295	ENSAMXG00000037076	alkbh3	98	57.295	Astyanax_mexicanus
ENSBTAG00000009518	ALKBH3	98	85.563	ENSCJAG00000011353	ALKBH3	100	85.563	Callithrix_jacchus
ENSBTAG00000009518	ALKBH3	99	86.268	ENSCAFG00000006657	ALKBH3	98	86.268	Canis_familiaris
ENSBTAG00000009518	ALKBH3	99	85.915	ENSCAFG00020006841	ALKBH3	98	85.915	Canis_lupus_dingo
ENSBTAG00000009518	ALKBH3	100	96.154	ENSCHIG00000017579	ALKBH3	100	96.154	Capra_hircus
ENSBTAG00000009518	ALKBH3	99	81.690	ENSTSYG00000005498	ALKBH3	99	81.690	Carlito_syrichta
ENSBTAG00000009518	ALKBH3	99	78.521	ENSCAPG00000004995	ALKBH3	99	78.521	Cavia_aperea
ENSBTAG00000009518	ALKBH3	99	80.986	ENSCPOG00000005138	ALKBH3	99	80.986	Cavia_porcellus
ENSBTAG00000009518	ALKBH3	100	83.737	ENSCCAG00000036907	ALKBH3	100	83.737	Cebus_capucinus
ENSBTAG00000009518	ALKBH3	100	86.713	ENSCATG00000035646	ALKBH3	100	86.713	Cercocebus_atys
ENSBTAG00000009518	ALKBH3	99	80.986	ENSCLAG00000016579	ALKBH3	99	80.986	Chinchilla_lanigera
ENSBTAG00000009518	ALKBH3	100	85.664	ENSCSAG00000005539	ALKBH3	100	85.664	Chlorocebus_sabaeus
ENSBTAG00000009518	ALKBH3	100	84.429	ENSCHOG00000001407	ALKBH3	100	84.429	Choloepus_hoffmanni
ENSBTAG00000009518	ALKBH3	99	69.930	ENSCPBG00000012575	ALKBH3	99	69.930	Chrysemys_picta_bellii
ENSBTAG00000009518	ALKBH3	57	56.291	ENSCING00000007764	-	98	56.291	Ciona_intestinalis
ENSBTAG00000009518	ALKBH3	96	41.818	ENSCSAVG00000000783	-	98	41.818	Ciona_savignyi
ENSBTAG00000009518	ALKBH3	100	86.364	ENSCANG00000018698	ALKBH3	100	86.364	Colobus_angolensis_palliatus
ENSBTAG00000009518	ALKBH3	100	83.566	ENSCGRG00001014489	Alkbh3	100	83.566	Cricetulus_griseus_chok1gshd
ENSBTAG00000009518	ALKBH3	100	83.566	ENSCGRG00000017661	Alkbh3	100	83.566	Cricetulus_griseus_crigri
ENSBTAG00000009518	ALKBH3	99	53.472	ENSCSEG00000000814	alkbh3	95	53.472	Cynoglossus_semilaevis
ENSBTAG00000009518	ALKBH3	99	55.439	ENSCVAG00000009432	alkbh3	95	55.439	Cyprinodon_variegatus
ENSBTAG00000009518	ALKBH3	99	55.124	ENSDARG00000045606	alkbh3	97	55.124	Danio_rerio
ENSBTAG00000009518	ALKBH3	100	82.867	ENSDNOG00000036652	ALKBH3	100	82.867	Dasypus_novemcinctus
ENSBTAG00000009518	ALKBH3	99	82.042	ENSDORG00000000083	Alkbh3	99	82.042	Dipodomys_ordii
ENSBTAG00000009518	ALKBH3	99	89.399	ENSEASG00005014856	ALKBH3	96	89.399	Equus_asinus_asinus
ENSBTAG00000009518	ALKBH3	99	89.753	ENSECAG00000010673	ALKBH3	96	89.753	Equus_caballus
ENSBTAG00000009518	ALKBH3	60	88.889	ENSEEUG00000002183	ALKBH3	56	88.889	Erinaceus_europaeus
ENSBTAG00000009518	ALKBH3	97	50.909	ENSELUG00000003260	alkbh3	94	50.909	Esox_lucius
ENSBTAG00000009518	ALKBH3	100	87.762	ENSFCAG00000029461	ALKBH3	100	87.762	Felis_catus
ENSBTAG00000009518	ALKBH3	98	67.857	ENSFALG00000012361	ALKBH3	98	67.857	Ficedula_albicollis
ENSBTAG00000009518	ALKBH3	99	79.225	ENSFDAG00000012666	ALKBH3	99	79.225	Fukomys_damarensis
ENSBTAG00000009518	ALKBH3	99	55.903	ENSFHEG00000018735	alkbh3	95	55.903	Fundulus_heteroclitus
ENSBTAG00000009518	ALKBH3	99	55.052	ENSGMOG00000019146	alkbh3	96	55.052	Gadus_morhua
ENSBTAG00000009518	ALKBH3	89	70.196	ENSGALG00000041309	ALKBH3	66	70.196	Gallus_gallus
ENSBTAG00000009518	ALKBH3	99	53.497	ENSGAFG00000005814	alkbh3	97	51.527	Gambusia_affinis
ENSBTAG00000009518	ALKBH3	99	54.770	ENSGACG00000006950	alkbh3	99	54.770	Gasterosteus_aculeatus
ENSBTAG00000009518	ALKBH3	75	75.000	ENSGAGG00000013151	ALKBH3	99	77.000	Gopherus_agassizii
ENSBTAG00000009518	ALKBH3	100	86.713	ENSGGOG00000001931	ALKBH3	100	86.713	Gorilla_gorilla
ENSBTAG00000009518	ALKBH3	99	54.737	ENSHBUG00000008513	alkbh3	96	54.737	Haplochromis_burtoni
ENSBTAG00000009518	ALKBH3	98	79.359	ENSHGLG00000019437	ALKBH3	98	81.139	Heterocephalus_glaber_female
ENSBTAG00000009518	ALKBH3	98	71.530	ENSHGLG00100004468	ALKBH3	98	74.021	Heterocephalus_glaber_male
ENSBTAG00000009518	ALKBH3	98	54.770	ENSIPUG00000017036	alkbh3	98	54.770	Ictalurus_punctatus
ENSBTAG00000009518	ALKBH3	98	83.986	ENSSTOG00000006060	ALKBH3	100	83.986	Ictidomys_tridecemlineatus
ENSBTAG00000009518	ALKBH3	99	78.521	ENSJJAG00000018577	-	98	78.521	Jaculus_jaculus
ENSBTAG00000009518	ALKBH3	99	56.491	ENSKMAG00000006499	alkbh3	95	56.491	Kryptolebias_marmoratus
ENSBTAG00000009518	ALKBH3	99	54.007	ENSLBEG00000004226	alkbh3	95	54.007	Labrus_bergylta
ENSBTAG00000009518	ALKBH3	98	60.976	ENSLACG00000017208	ALKBH3	99	60.976	Latimeria_chalumnae
ENSBTAG00000009518	ALKBH3	98	56.584	ENSLOCG00000001237	alkbh3	100	56.584	Lepisosteus_oculatus
ENSBTAG00000009518	ALKBH3	100	84.266	ENSLAFG00000003441	ALKBH3	100	84.266	Loxodonta_africana
ENSBTAG00000009518	ALKBH3	100	86.364	ENSMFAG00000031334	ALKBH3	100	86.364	Macaca_fascicularis
ENSBTAG00000009518	ALKBH3	100	86.364	ENSMNEG00000042403	ALKBH3	100	86.364	Macaca_nemestrina
ENSBTAG00000009518	ALKBH3	100	86.364	ENSMLEG00000038324	ALKBH3	100	86.364	Mandrillus_leucophaeus
ENSBTAG00000009518	ALKBH3	99	56.897	ENSMAMG00000023051	alkbh3	95	56.897	Mastacembelus_armatus
ENSBTAG00000009518	ALKBH3	99	54.737	ENSMZEG00005011786	alkbh3	96	54.737	Maylandia_zebra
ENSBTAG00000009518	ALKBH3	77	69.369	ENSMGAG00000010479	ALKBH3	98	69.369	Meleagris_gallopavo
ENSBTAG00000009518	ALKBH3	99	83.451	ENSMAUG00000009317	Alkbh3	99	83.451	Mesocricetus_auratus
ENSBTAG00000009518	ALKBH3	99	85.211	ENSMICG00000014651	ALKBH3	99	85.211	Microcebus_murinus
ENSBTAG00000009518	ALKBH3	99	78.169	ENSMOCG00000012816	Alkbh3	99	78.169	Microtus_ochrogaster
ENSBTAG00000009518	ALKBH3	99	51.894	ENSMMOG00000020327	alkbh3	93	49.275	Mola_mola
ENSBTAG00000009518	ALKBH3	85	77.778	ENSMODG00000019863	-	98	77.778	Monodelphis_domestica
ENSBTAG00000009518	ALKBH3	99	56.294	ENSMALG00000017888	alkbh3	95	56.294	Monopterus_albus
ENSBTAG00000009518	ALKBH3	99	82.746	MGP_CAROLIEiJ_G0023995	Alkbh3	99	82.746	Mus_caroli
ENSBTAG00000009518	ALKBH3	99	82.042	ENSMUSG00000040174	Alkbh3	99	82.042	Mus_musculus
ENSBTAG00000009518	ALKBH3	99	81.560	MGP_PahariEiJ_G0025431	Alkbh3	99	81.560	Mus_pahari
ENSBTAG00000009518	ALKBH3	99	82.042	MGP_SPRETEiJ_G0024905	Alkbh3	99	82.042	Mus_spretus
ENSBTAG00000009518	ALKBH3	100	87.762	ENSMPUG00000006151	ALKBH3	100	87.762	Mustela_putorius_furo
ENSBTAG00000009518	ALKBH3	99	88.070	ENSMLUG00000029289	ALKBH3	99	88.070	Myotis_lucifugus
ENSBTAG00000009518	ALKBH3	99	82.332	ENSNGAG00000004591	Alkbh3	99	82.332	Nannospalax_galili
ENSBTAG00000009518	ALKBH3	99	52.830	ENSNBRG00000016311	alkbh3	96	52.830	Neolamprologus_brichardi
ENSBTAG00000009518	ALKBH3	100	85.315	ENSNLEG00000027521	ALKBH3	100	85.315	Nomascus_leucogenys
ENSBTAG00000009518	ALKBH3	73	82.381	ENSMEUG00000007604	ALKBH3	99	82.381	Notamacropus_eugenii
ENSBTAG00000009518	ALKBH3	99	80.986	ENSOPRG00000006771	ALKBH3	99	80.986	Ochotona_princeps
ENSBTAG00000009518	ALKBH3	99	79.649	ENSODEG00000017204	ALKBH3	99	79.649	Octodon_degus
ENSBTAG00000009518	ALKBH3	99	55.088	ENSONIG00000015605	alkbh3	97	54.895	Oreochromis_niloticus
ENSBTAG00000009518	ALKBH3	98	71.930	ENSOANG00000009208	ALKBH3	97	71.930	Ornithorhynchus_anatinus
ENSBTAG00000009518	ALKBH3	99	81.119	ENSOCUG00000016359	ALKBH3	99	81.119	Oryctolagus_cuniculus
ENSBTAG00000009518	ALKBH3	99	55.594	ENSORLG00000001437	alkbh3	95	55.594	Oryzias_latipes
ENSBTAG00000009518	ALKBH3	90	53.101	ENSORLG00020002409	alkbh3	96	53.101	Oryzias_latipes_hni
ENSBTAG00000009518	ALKBH3	99	54.895	ENSORLG00015016266	alkbh3	95	54.895	Oryzias_latipes_hsok
ENSBTAG00000009518	ALKBH3	99	54.577	ENSOMEG00000003835	alkbh3	95	54.577	Oryzias_melastigma
ENSBTAG00000009518	ALKBH3	99	85.563	ENSOGAG00000009107	ALKBH3	96	85.563	Otolemur_garnettii
ENSBTAG00000009518	ALKBH3	100	95.105	ENSOARG00000001123	ALKBH3	100	95.105	Ovis_aries
ENSBTAG00000009518	ALKBH3	100	87.063	ENSPPAG00000028729	ALKBH3	100	87.063	Pan_paniscus
ENSBTAG00000009518	ALKBH3	100	87.762	ENSPPRG00000005278	ALKBH3	100	87.762	Panthera_pardus
ENSBTAG00000009518	ALKBH3	100	86.014	ENSPTIG00000019393	ALKBH3	100	86.014	Panthera_tigris_altaica
ENSBTAG00000009518	ALKBH3	100	87.063	ENSPTRG00000003523	ALKBH3	100	87.063	Pan_troglodytes
ENSBTAG00000009518	ALKBH3	100	81.944	ENSPANG00000003104	ALKBH3	100	81.944	Papio_anubis
ENSBTAG00000009518	ALKBH3	98	53.710	ENSPKIG00000021815	alkbh3	98	50.951	Paramormyrops_kingsleyae
ENSBTAG00000009518	ALKBH3	80	69.432	ENSPSIG00000011933	ALKBH3	96	69.432	Pelodiscus_sinensis
ENSBTAG00000009518	ALKBH3	99	49.049	ENSPMGG00000008862	alkbh3	94	49.049	Periophthalmus_magnuspinnatus
ENSBTAG00000009518	ALKBH3	100	82.867	ENSPEMG00000019372	Alkbh3	100	82.867	Peromyscus_maniculatus_bairdii
ENSBTAG00000009518	ALKBH3	89	55.118	ENSPMAG00000001119	alkbh3	99	55.118	Petromyzon_marinus
ENSBTAG00000009518	ALKBH3	99	74.648	ENSPCIG00000021794	ALKBH3	97	74.648	Phascolarctos_cinereus
ENSBTAG00000009518	ALKBH3	99	54.545	ENSPFOG00000002705	alkbh3	95	54.545	Poecilia_formosa
ENSBTAG00000009518	ALKBH3	99	54.895	ENSPLAG00000002355	alkbh3	95	54.895	Poecilia_latipinna
ENSBTAG00000009518	ALKBH3	99	54.545	ENSPMEG00000004476	alkbh3	95	54.545	Poecilia_mexicana
ENSBTAG00000009518	ALKBH3	99	54.895	ENSPREG00000005505	alkbh3	90	54.895	Poecilia_reticulata
ENSBTAG00000009518	ALKBH3	98	86.071	ENSPPYG00000003342	ALKBH3	95	86.071	Pongo_abelii
ENSBTAG00000009518	ALKBH3	100	82.517	ENSPCAG00000002955	ALKBH3	100	82.517	Procavia_capensis
ENSBTAG00000009518	ALKBH3	99	85.211	ENSPCOG00000020139	ALKBH3	99	85.211	Propithecus_coquereli
ENSBTAG00000009518	ALKBH3	99	86.620	ENSPVAG00000011569	ALKBH3	99	86.620	Pteropus_vampyrus
ENSBTAG00000009518	ALKBH3	99	54.737	ENSPNYG00000010362	alkbh3	96	54.737	Pundamilia_nyererei
ENSBTAG00000009518	ALKBH3	98	57.447	ENSPNAG00000015943	alkbh3	95	57.447	Pygocentrus_nattereri
ENSBTAG00000009518	ALKBH3	99	80.634	ENSRNOG00000021678	Alkbh3	96	80.634	Rattus_norvegicus
ENSBTAG00000009518	ALKBH3	100	85.664	ENSRBIG00000034161	ALKBH3	100	85.664	Rhinopithecus_bieti
ENSBTAG00000009518	ALKBH3	100	86.014	ENSRROG00000042173	ALKBH3	100	86.014	Rhinopithecus_roxellana
ENSBTAG00000009518	ALKBH3	100	84.083	ENSSBOG00000023947	ALKBH3	100	84.083	Saimiri_boliviensis_boliviensis
ENSBTAG00000009518	ALKBH3	99	75.000	ENSSHAG00000006189	ALKBH3	98	75.000	Sarcophilus_harrisii
ENSBTAG00000009518	ALKBH3	99	55.319	ENSSFOG00015003566	alkbh3	98	55.319	Scleropages_formosus
ENSBTAG00000009518	ALKBH3	99	54.639	ENSSMAG00000004404	alkbh3	95	54.639	Scophthalmus_maximus
ENSBTAG00000009518	ALKBH3	99	54.545	ENSSDUG00000000513	alkbh3	95	54.545	Seriola_dumerili
ENSBTAG00000009518	ALKBH3	99	53.633	ENSSLDG00000003080	alkbh3	95	53.633	Seriola_lalandi_dorsalis
ENSBTAG00000009518	ALKBH3	99	69.686	ENSSPUG00000005861	ALKBH3	99	69.686	Sphenodon_punctatus
ENSBTAG00000009518	ALKBH3	99	54.762	ENSSPAG00000020713	alkbh3	94	54.762	Stegastes_partitus
ENSBTAG00000009518	ALKBH3	100	92.308	ENSSSCG00000040937	ALKBH3	100	92.308	Sus_scrofa
ENSBTAG00000009518	ALKBH3	85	68.571	ENSTGUG00000010222	ALKBH3	99	68.571	Taeniopygia_guttata
ENSBTAG00000009518	ALKBH3	99	51.724	ENSTRUG00000021459	alkbh3	86	51.724	Takifugu_rubripes
ENSBTAG00000009518	ALKBH3	99	53.710	ENSTNIG00000010385	alkbh3	96	53.710	Tetraodon_nigroviridis
ENSBTAG00000009518	ALKBH3	99	81.690	ENSTBEG00000016697	ALKBH3	99	81.690	Tupaia_belangeri
ENSBTAG00000009518	ALKBH3	100	91.958	ENSTTRG00000005121	ALKBH3	100	91.958	Tursiops_truncatus
ENSBTAG00000009518	ALKBH3	100	85.019	ENSUAMG00000025129	ALKBH3	100	89.754	Ursus_americanus
ENSBTAG00000009518	ALKBH3	100	87.762	ENSUMAG00000015602	ALKBH3	100	87.762	Ursus_maritimus
ENSBTAG00000009518	ALKBH3	99	90.526	ENSVPAG00000000215	ALKBH3	99	90.526	Vicugna_pacos
ENSBTAG00000009518	ALKBH3	99	85.211	ENSVVUG00000017283	ALKBH3	98	85.211	Vulpes_vulpes
ENSBTAG00000009518	ALKBH3	98	56.098	ENSXETG00000022230	alkbh3	99	55.944	Xenopus_tropicalis
ENSBTAG00000009518	ALKBH3	77	51.220	ENSXCOG00000000737	alkbh3	79	51.220	Xiphophorus_couchianus
ENSBTAG00000009518	ALKBH3	99	53.710	ENSXMAG00000013123	alkbh3	95	53.710	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005737	cytoplasm	-	IEA	Component
GO:0006281	DNA repair	-	ISS	Process
GO:0006307	DNA dealkylation involved in DNA repair	-	ISS	Process
GO:0008198	ferrous iron binding	-	ISS	Function
GO:0008283	cell proliferation	-	ISS	Process
GO:0035552	oxidative single-stranded DNA demethylation	-	ISS	Process
GO:0043734	DNA-N1-methyladenine dioxygenase activity	-	ISS	Function
GO:1990930	RNA N1-methyladenosine dioxygenase activity	-	ISS	Function