EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSBTAG00000009711 (Gene tree)
Gene ID
504844
Gene Symbol
RPA1
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Bos_taurus
Status
putative
Strand
Plus strand
Length
46439 bases
Position
chr19:22899633-22946071
Accession
34094
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSBTAP00000012812tRNA_anti-codonPF01336.253.4e-1211
ENSBTAP00000066113tRNA_anti-codonPF01336.253.5e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSBTAT00000075195-2786-ENSBTAP00000066113580 (aa)--
ENSBTAT00000012812-2894-ENSBTAP00000012812616 (aa)-Q0VCV0
Gene Model
Click here to download ENSBTAG00000009711's gene model file
Pathways
Pathway IDPathway NameSource
bta03030DNA replicationKEGG
bta03420Nucleotide excision repairKEGG
bta03430Mismatch repairKEGG
bta03440Homologous recombinationKEGG
bta03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000009711's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSBTAG00000009711RPA19961.928ENSAPOG00000011658rpa19962.092Acanthochromis_polyacanthus
ENSBTAG00000009711RPA19958.969ENSAPOG00000019409RPA19558.969Acanthochromis_polyacanthus
ENSBTAG00000009711RPA19991.461ENSAMEG00000007706RPA19891.461Ailuropoda_melanoleuca
ENSBTAG00000009711RPA19558.947ENSACIG00000007277rpa19958.947Amphilophus_citrinellus
ENSBTAG00000009711RPA19557.770ENSACIG00000012881RPA19957.770Amphilophus_citrinellus
ENSBTAG00000009711RPA19953.858ENSAOCG00000009003RPA19954.321Amphiprion_ocellaris
ENSBTAG00000009711RPA19962.951ENSAOCG00000023376rpa19963.276Amphiprion_ocellaris
ENSBTAG00000009711RPA19953.394ENSAPEG00000019132RPA19953.394Amphiprion_percula
ENSBTAG00000009711RPA19962.787ENSAPEG00000008634rpa19963.212Amphiprion_percula
ENSBTAG00000009711RPA19954.434ENSATEG00000006443RPA110054.434Anabas_testudineus
ENSBTAG00000009711RPA19563.465ENSATEG00000022024rpa19963.465Anabas_testudineus
ENSBTAG00000009711RPA19865.436ENSAPLG00000012442RPA110065.583Anas_platyrhynchos
ENSBTAG00000009711RPA19963.651ENSACAG00000014490RPA19964.297Anolis_carolinensis
ENSBTAG00000009711RPA19889.884ENSANAG00000023456RPA110089.884Aotus_nancymaae
ENSBTAG00000009711RPA19363.652ENSACLG00000006640rpa19963.652Astatotilapia_calliptera
ENSBTAG00000009711RPA19957.524ENSACLG00000005223RPA19957.524Astatotilapia_calliptera
ENSBTAG00000009711RPA19961.626ENSAMXG00000008418rpa19961.912Astyanax_mexicanus
ENSBTAG00000009711RPA110090.097ENSCJAG00000001848RPA110090.097Callithrix_jacchus
ENSBTAG00000009711RPA110092.208ENSCAFG00000019249RPA110092.208Canis_familiaris
ENSBTAG00000009711RPA110092.208ENSCAFG00020009847RPA110092.208Canis_lupus_dingo
ENSBTAG00000009711RPA110098.539ENSCHIG00000026308RPA110098.539Capra_hircus
ENSBTAG00000009711RPA110090.924ENSTSYG00000003482-10090.924Carlito_syrichta
ENSBTAG00000009711RPA110086.688ENSCPOG00000000035RPA110086.688Cavia_porcellus
ENSBTAG00000009711RPA110081.034ENSCCAG00000010981RPA110081.034Cebus_capucinus
ENSBTAG00000009711RPA110084.253ENSCLAG00000015045-10084.253Chinchilla_lanigera
ENSBTAG00000009711RPA19988.455ENSCLAG00000005185-10088.455Chinchilla_lanigera
ENSBTAG00000009711RPA110080.517ENSCSAG00000013833RPA110081.239Chlorocebus_sabaeus
ENSBTAG00000009711RPA19589.286ENSCHOG00000013540-10089.286Choloepus_hoffmanni
ENSBTAG00000009711RPA17193.166ENSCHOG00000009454-10093.166Choloepus_hoffmanni
ENSBTAG00000009711RPA19977.073ENSCPBG00000020377RPA19977.719Chrysemys_picta_bellii
ENSBTAG00000009711RPA19941.571ENSCING00000023482-9841.571Ciona_intestinalis
ENSBTAG00000009711RPA19887.107ENSCANG00000030911RPA110087.107Colobus_angolensis_palliatus
ENSBTAG00000009711RPA19989.159ENSCGRG00001008197Rpa19989.159Cricetulus_griseus_chok1gshd
ENSBTAG00000009711RPA18187.771ENSCGRG00000000582Rpa19987.771Cricetulus_griseus_crigri
ENSBTAG00000009711RPA19951.603ENSCSEG00000012726RPA19853.082Cynoglossus_semilaevis
ENSBTAG00000009711RPA19960.556ENSCSEG00000013066rpa19960.556Cynoglossus_semilaevis
ENSBTAG00000009711RPA19552.941ENSCVAG00000013446-9653.023Cyprinodon_variegatus
ENSBTAG00000009711RPA19962.662ENSCVAG00000019431rpa19963.415Cyprinodon_variegatus
ENSBTAG00000009711RPA19963.636ENSDARG00000003938rpa19963.636Danio_rerio
ENSBTAG00000009711RPA19991.598ENSDNOG00000017218RPA19991.598Dasypus_novemcinctus
ENSBTAG00000009711RPA110088.961ENSDORG00000006199Rpa110088.961Dipodomys_ordii
ENSBTAG00000009711RPA19942.811FBgn0010173RpA-709843.317Drosophila_melanogaster
ENSBTAG00000009711RPA18390.625ENSETEG00000017608RPA18290.625Echinops_telfairi
ENSBTAG00000009711RPA19893.189ENSEASG00005009372RPA110090.792Equus_asinus_asinus
ENSBTAG00000009711RPA110093.182ENSECAG00000023886RPA110093.182Equus_caballus
ENSBTAG00000009711RPA16893.333ENSEEUG00000002186-6893.333Erinaceus_europaeus
ENSBTAG00000009711RPA19961.327ENSELUG00000021071rpa19961.489Esox_lucius
ENSBTAG00000009711RPA18855.331ENSELUG00000006136RPA19955.331Esox_lucius
ENSBTAG00000009711RPA110089.627ENSFCAG00000006306RPA19989.627Felis_catus
ENSBTAG00000009711RPA110074.637ENSFALG00000006575RPA19974.637Ficedula_albicollis
ENSBTAG00000009711RPA19988.599ENSFDAG00000007720RPA19988.599Fukomys_damarensis
ENSBTAG00000009711RPA19960.912ENSFHEG00000003580rpa19960.912Fundulus_heteroclitus
ENSBTAG00000009711RPA19958.033ENSGMOG00000010382rpa19958.033Gadus_morhua
ENSBTAG00000009711RPA110075.365ENSGALG00000003072RPA19975.365Gallus_gallus
ENSBTAG00000009711RPA19954.628ENSGAFG00000020953RPA19954.394Gambusia_affinis
ENSBTAG00000009711RPA19961.928ENSGAFG00000012916rpa19961.928Gambusia_affinis
ENSBTAG00000009711RPA19960.454ENSGACG00000010856rpa19960.454Gasterosteus_aculeatus
ENSBTAG00000009711RPA19977.073ENSGAGG00000013611RPA19977.073Gopherus_agassizii
ENSBTAG00000009711RPA110087.338ENSGGOG00000014186RPA110087.338Gorilla_gorilla
ENSBTAG00000009711RPA19653.422ENSHBUG00000009348RPA19953.422Haplochromis_burtoni
ENSBTAG00000009711RPA19962.684ENSHBUG00000017773rpa19962.684Haplochromis_burtoni
ENSBTAG00000009711RPA19988.762ENSHGLG00000008846RPA110088.762Heterocephalus_glaber_female
ENSBTAG00000009711RPA110075.000ENSHGLG00100002005-10075.000Heterocephalus_glaber_male
ENSBTAG00000009711RPA110083.442ENSHGLG00100000799-10083.442Heterocephalus_glaber_male
ENSBTAG00000009711RPA19988.762ENSHGLG00100017755-10088.762Heterocephalus_glaber_male
ENSBTAG00000009711RPA19943.902ENSHCOG00000000351RPA19843.902Hippocampus_comes
ENSBTAG00000009711RPA19960.258ENSHCOG00000001401rpa19960.848Hippocampus_comes
ENSBTAG00000009711RPA19962.036ENSIPUG00000004400rpa19962.036Ictalurus_punctatus
ENSBTAG00000009711RPA19884.704ENSSTOG00000022475RPA19884.704Ictidomys_tridecemlineatus
ENSBTAG00000009711RPA19589.116ENSJJAG00000000876Rpa19889.116Jaculus_jaculus
ENSBTAG00000009711RPA19961.688ENSKMAG00000005605rpa19962.013Kryptolebias_marmoratus
ENSBTAG00000009711RPA19954.723ENSKMAG00000000234RPA19954.723Kryptolebias_marmoratus
ENSBTAG00000009711RPA19961.702ENSLBEG00000021604rpa19961.702Labrus_bergylta
ENSBTAG00000009711RPA19861.678ENSLBEG00000002281RPA18661.678Labrus_bergylta
ENSBTAG00000009711RPA18164.881ENSLACG00000007210RPA19964.881Latimeria_chalumnae
ENSBTAG00000009711RPA19966.667ENSLOCG00000006397rpa19966.667Lepisosteus_oculatus
ENSBTAG00000009711RPA19990.484ENSLAFG00000015354RPA19990.484Loxodonta_africana
ENSBTAG00000009711RPA18790.316ENSMFAG00000036138-10091.124Macaca_fascicularis
ENSBTAG00000009711RPA110082.820ENSMMUG00000002442-10082.820Macaca_mulatta
ENSBTAG00000009711RPA19890.083ENSMMUG00000011604-10090.759Macaca_mulatta
ENSBTAG00000009711RPA18988.000ENSMNEG00000029837-10088.000Macaca_nemestrina
ENSBTAG00000009711RPA110086.688ENSMNEG00000031632-10087.358Macaca_nemestrina
ENSBTAG00000009711RPA19883.855ENSMLEG00000038768-10084.539Mandrillus_leucophaeus
ENSBTAG00000009711RPA19951.335ENSMAMG00000020097RPA19951.335Mastacembelus_armatus
ENSBTAG00000009711RPA19962.684ENSMAMG00000017993rpa19962.684Mastacembelus_armatus
ENSBTAG00000009711RPA19957.524ENSMZEG00005024731RPA19957.524Maylandia_zebra
ENSBTAG00000009711RPA19962.684ENSMZEG00005007551rpa19962.684Maylandia_zebra
ENSBTAG00000009711RPA19975.041ENSMGAG00000005315RPA19975.041Meleagris_gallopavo
ENSBTAG00000009711RPA19789.667ENSMAUG00000010474Rpa19989.667Mesocricetus_auratus
ENSBTAG00000009711RPA110091.396ENSMICG00000012867RPA110091.396Microcebus_murinus
ENSBTAG00000009711RPA19988.254ENSMOCG00000013019Rpa19988.254Microtus_ochrogaster
ENSBTAG00000009711RPA19756.093ENSMMOG00000010868RPA19759.471Mola_mola
ENSBTAG00000009711RPA19961.501ENSMMOG00000014292rpa19962.626Mola_mola
ENSBTAG00000009711RPA19984.228ENSMODG00000010549RPA19984.228Monodelphis_domestica
ENSBTAG00000009711RPA19963.011ENSMALG00000011453rpa19963.175Monopterus_albus
ENSBTAG00000009711RPA19659.956ENSMALG00000001208RPA18259.956Monopterus_albus
ENSBTAG00000009711RPA19987.338MGP_CAROLIEiJ_G0016734Rpa19987.338Mus_caroli
ENSBTAG00000009711RPA19985.048ENSMUSG00000000751Rpa19985.048Mus_musculus
ENSBTAG00000009711RPA19988.368MGP_PahariEiJ_G0017871Rpa19988.368Mus_pahari
ENSBTAG00000009711RPA19985.072MGP_SPRETEiJ_G0017577Rpa19985.072Mus_spretus
ENSBTAG00000009711RPA110092.045ENSMPUG00000013119RPA110092.045Mustela_putorius_furo
ENSBTAG00000009711RPA110089.533ENSMLUG00000006113RPA110089.533Myotis_lucifugus
ENSBTAG00000009711RPA19985.575ENSNGAG00000004522Rpa19785.575Nannospalax_galili
ENSBTAG00000009711RPA19463.448ENSNBRG00000020595rpa19963.448Neolamprologus_brichardi
ENSBTAG00000009711RPA19655.649ENSNBRG00000009672RPA19555.649Neolamprologus_brichardi
ENSBTAG00000009711RPA110089.123ENSNLEG00000017149RPA110089.123Nomascus_leucogenys
ENSBTAG00000009711RPA18890.476ENSMEUG00000006714RPA18490.476Notamacropus_eugenii
ENSBTAG00000009711RPA110082.720ENSODEG00000009038RPA110082.720Octodon_degus
ENSBTAG00000009711RPA19962.885ENSONIG00000013135rpa19962.885Oreochromis_niloticus
ENSBTAG00000009711RPA19883.748ENSOANG00000010880RPA19983.914Ornithorhynchus_anatinus
ENSBTAG00000009711RPA110086.997ENSOCUG00000001504RPA110086.997Oryctolagus_cuniculus
ENSBTAG00000009711RPA19954.128ENSORLG00000003368RPA19954.128Oryzias_latipes
ENSBTAG00000009711RPA19962.459ENSORLG00000004856rpa19962.459Oryzias_latipes
ENSBTAG00000009711RPA19952.632ENSORLG00020015284RPA19952.632Oryzias_latipes_hni
ENSBTAG00000009711RPA19962.623ENSORLG00020008980rpa19962.623Oryzias_latipes_hni
ENSBTAG00000009711RPA17160.000ENSORLG00015005867-9860.000Oryzias_latipes_hsok
ENSBTAG00000009711RPA19954.673ENSORLG00015020383RPA19954.673Oryzias_latipes_hsok
ENSBTAG00000009711RPA19962.623ENSORLG00015013982rpa19962.623Oryzias_latipes_hsok
ENSBTAG00000009711RPA19954.226ENSOMEG00000011040RPA110056.441Oryzias_melastigma
ENSBTAG00000009711RPA19960.820ENSOMEG00000004704rpa19960.820Oryzias_melastigma
ENSBTAG00000009711RPA110091.071ENSOGAG00000005581-10091.071Otolemur_garnettii
ENSBTAG00000009711RPA19488.772ENSOGAG00000029379-10088.772Otolemur_garnettii
ENSBTAG00000009711RPA110098.701ENSOARG00000014479RPA110098.701Ovis_aries
ENSBTAG00000009711RPA110089.773ENSPPAG00000039680RPA110089.773Pan_paniscus
ENSBTAG00000009711RPA110089.303ENSPPRG00000011807RPA19989.303Panthera_pardus
ENSBTAG00000009711RPA110089.465ENSPTIG00000007898RPA19989.465Panthera_tigris_altaica
ENSBTAG00000009711RPA110089.773ENSPTRG00000008539RPA110089.773Pan_troglodytes
ENSBTAG00000009711RPA110089.935ENSPANG00000024592RPA110090.600Papio_anubis
ENSBTAG00000009711RPA19461.063ENSPKIG00000008053rpa19461.644Paramormyrops_kingsleyae
ENSBTAG00000009711RPA19776.461ENSPSIG00000015617RPA19976.461Pelodiscus_sinensis
ENSBTAG00000009711RPA19953.462ENSPMGG00000000543RPA19955.888Periophthalmus_magnuspinnatus
ENSBTAG00000009711RPA19861.526ENSPMGG00000011589rpa19961.692Periophthalmus_magnuspinnatus
ENSBTAG00000009711RPA19989.886ENSPEMG00000021061Rpa19989.886Peromyscus_maniculatus_bairdii
ENSBTAG00000009711RPA110082.496ENSPCIG00000019049RPA19982.714Phascolarctos_cinereus
ENSBTAG00000009711RPA19961.789ENSPFOG00000003987rpa19961.789Poecilia_formosa
ENSBTAG00000009711RPA19454.093ENSPLAG00000008844-9754.093Poecilia_latipinna
ENSBTAG00000009711RPA19961.463ENSPLAG00000004984rpa19961.463Poecilia_latipinna
ENSBTAG00000009711RPA19961.951ENSPMEG00000020602rpa19962.694Poecilia_mexicana
ENSBTAG00000009711RPA19454.180ENSPMEG00000003627-9753.945Poecilia_mexicana
ENSBTAG00000009711RPA19952.733ENSPREG00000010119RPA110052.322Poecilia_reticulata
ENSBTAG00000009711RPA19454.281ENSPREG00000010174rpa19555.323Poecilia_reticulata
ENSBTAG00000009711RPA110091.558ENSPCOG00000001799RPA110091.558Propithecus_coquereli
ENSBTAG00000009711RPA110092.695ENSPVAG00000002149RPA110092.695Pteropus_vampyrus
ENSBTAG00000009711RPA19962.848ENSPNYG00000016316rpa19963.605Pundamilia_nyererei
ENSBTAG00000009711RPA19957.210ENSPNYG00000024165RPA19957.210Pundamilia_nyererei
ENSBTAG00000009711RPA18471.429ENSPNAG00000008599rpa19656.529Pygocentrus_nattereri
ENSBTAG00000009711RPA19988.418ENSRNOG00000003123Rpa19988.418Rattus_norvegicus
ENSBTAG00000009711RPA110090.113ENSRBIG00000036587RPA110090.113Rhinopithecus_bieti
ENSBTAG00000009711RPA110090.189ENSRROG00000043278RPA110090.189Rhinopithecus_roxellana
ENSBTAG00000009711RPA19732.570YAR007CRFA19732.570Saccharomyces_cerevisiae
ENSBTAG00000009711RPA19885.927ENSSBOG00000030233RPA19985.927Saimiri_boliviensis_boliviensis
ENSBTAG00000009711RPA19983.797ENSSHAG00000007969RPA19883.961Sarcophilus_harrisii
ENSBTAG00000009711RPA19963.902ENSSFOG00015005362rpa19263.902Scleropages_formosus
ENSBTAG00000009711RPA19952.496ENSSMAG00000019746RPA19952.273Scophthalmus_maximus
ENSBTAG00000009711RPA18964.434ENSSDUG00000016358RPA18163.946Seriola_dumerili
ENSBTAG00000009711RPA19964.157ENSSDUG00000011949rpa19964.157Seriola_dumerili
ENSBTAG00000009711RPA19963.993ENSSLDG00000011806rpa19963.993Seriola_lalandi_dorsalis
ENSBTAG00000009711RPA18964.733ENSSLDG00000020784RPA18064.384Seriola_lalandi_dorsalis
ENSBTAG00000009711RPA19382.353ENSSARG00000007506RPA18982.353Sorex_araneus
ENSBTAG00000009711RPA19772.819ENSSPUG00000007223RPA19972.819Sphenodon_punctatus
ENSBTAG00000009711RPA19962.684ENSSPAG00000009903rpa19962.684Stegastes_partitus
ENSBTAG00000009711RPA19658.179ENSSPAG00000011165RPA19757.647Stegastes_partitus
ENSBTAG00000009711RPA19894.859ENSSSCG00000017822RPA110094.859Sus_scrofa
ENSBTAG00000009711RPA110074.392ENSTGUG00000005775RPA19974.392Taeniopygia_guttata
ENSBTAG00000009711RPA19963.322ENSTRUG00000003616rpa19963.322Takifugu_rubripes
ENSBTAG00000009711RPA19958.197ENSTRUG00000000405RPA18658.197Takifugu_rubripes
ENSBTAG00000009711RPA19963.785ENSTNIG00000016199rpa19963.785Tetraodon_nigroviridis
ENSBTAG00000009711RPA187100.000ENSTBEG00000002709RPA189100.000Tupaia_belangeri
ENSBTAG00000009711RPA19993.659ENSTTRG00000001169RPA19993.659Tursiops_truncatus
ENSBTAG00000009711RPA18992.070ENSUAMG00000015676RPA19991.908Ursus_americanus
ENSBTAG00000009711RPA110092.370ENSUMAG00000009328RPA110092.370Ursus_maritimus
ENSBTAG00000009711RPA110093.019ENSVPAG00000009443RPA110093.019Vicugna_pacos
ENSBTAG00000009711RPA110092.208ENSVVUG00000021715RPA110092.208Vulpes_vulpes
ENSBTAG00000009711RPA19974.632ENSXETG00000013538rpa19975.654Xenopus_tropicalis
ENSBTAG00000009711RPA19360.105ENSXCOG00000010068rpa19461.261Xiphophorus_couchianus
ENSBTAG00000009711RPA19555.688ENSXCOG00000009899-9955.688Xiphophorus_couchianus
ENSBTAG00000009711RPA19960.650ENSXMAG00000004102rpa19962.238Xiphophorus_maculatus
ENSBTAG00000009711RPA19958.990ENSXMAG00000010333RPA19358.990Xiphophorus_maculatus

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