EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • Orthologs
Description
Ensembl ID
ENSBTAG00000009711 (Gene tree)
Gene ID
504844
Gene Symbol
RPA1
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Bos_taurus
Status
putative
Strand
Plus strand
Length
46439 bases
Position
chr19:22899633-22946071
Accession
34094
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSBTAP00000012812tRNA_anti-codonPF01336.253.4e-1211
ENSBTAP00000066113tRNA_anti-codonPF01336.253.5e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSBTAT00000075195-2786-ENSBTAP00000066113580 (aa)--
ENSBTAT00000012812-2894-ENSBTAP00000012812616 (aa)-Q0VCV0
Gene Model
Click here to download ENSBTAG00000009711's gene model file
Pathways
Pathway IDPathway NameSource
bta03030DNA replicationKEGG
bta03420Nucleotide excision repairKEGG
bta03430Mismatch repairKEGG
bta03440Homologous recombinationKEGG
bta03460Fanconi anemia pathwayKEGG
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSBTAG00000009711RPA19961.928ENSAPOG00000011658rpa19962.092Acanthochromis_polyacanthus
ENSBTAG00000009711RPA19958.969ENSAPOG00000019409RPA19558.969Acanthochromis_polyacanthus
ENSBTAG00000009711RPA19991.461ENSAMEG00000007706RPA19891.461Ailuropoda_melanoleuca
ENSBTAG00000009711RPA19558.947ENSACIG00000007277rpa19958.947Amphilophus_citrinellus
ENSBTAG00000009711RPA19557.770ENSACIG00000012881RPA19957.770Amphilophus_citrinellus
ENSBTAG00000009711RPA19953.858ENSAOCG00000009003RPA19954.321Amphiprion_ocellaris
ENSBTAG00000009711RPA19962.951ENSAOCG00000023376rpa19963.276Amphiprion_ocellaris
ENSBTAG00000009711RPA19953.394ENSAPEG00000019132RPA19953.394Amphiprion_percula
ENSBTAG00000009711RPA19962.787ENSAPEG00000008634rpa19963.212Amphiprion_percula
ENSBTAG00000009711RPA19954.434ENSATEG00000006443RPA110054.434Anabas_testudineus
ENSBTAG00000009711RPA19563.465ENSATEG00000022024rpa19963.465Anabas_testudineus
ENSBTAG00000009711RPA19865.436ENSAPLG00000012442RPA110065.583Anas_platyrhynchos
ENSBTAG00000009711RPA19963.651ENSACAG00000014490RPA19964.297Anolis_carolinensis
ENSBTAG00000009711RPA19889.884ENSANAG00000023456RPA110089.884Aotus_nancymaae
ENSBTAG00000009711RPA19363.652ENSACLG00000006640rpa19963.652Astatotilapia_calliptera
ENSBTAG00000009711RPA19957.524ENSACLG00000005223RPA19957.524Astatotilapia_calliptera
ENSBTAG00000009711RPA19961.626ENSAMXG00000008418rpa19961.912Astyanax_mexicanus
ENSBTAG00000009711RPA110090.097ENSCJAG00000001848RPA110090.097Callithrix_jacchus
ENSBTAG00000009711RPA110092.208ENSCAFG00000019249RPA110092.208Canis_familiaris
ENSBTAG00000009711RPA110092.208ENSCAFG00020009847RPA110092.208Canis_lupus_dingo
ENSBTAG00000009711RPA110098.539ENSCHIG00000026308RPA110098.539Capra_hircus
ENSBTAG00000009711RPA110090.924ENSTSYG00000003482-10090.924Carlito_syrichta
ENSBTAG00000009711RPA110086.688ENSCPOG00000000035RPA110086.688Cavia_porcellus
ENSBTAG00000009711RPA110081.034ENSCCAG00000010981RPA110081.034Cebus_capucinus
ENSBTAG00000009711RPA110084.253ENSCLAG00000015045-10084.253Chinchilla_lanigera
ENSBTAG00000009711RPA19988.455ENSCLAG00000005185-10088.455Chinchilla_lanigera
ENSBTAG00000009711RPA110080.517ENSCSAG00000013833RPA110081.239Chlorocebus_sabaeus
ENSBTAG00000009711RPA19589.286ENSCHOG00000013540-10089.286Choloepus_hoffmanni
ENSBTAG00000009711RPA17193.166ENSCHOG00000009454-10093.166Choloepus_hoffmanni
ENSBTAG00000009711RPA19977.073ENSCPBG00000020377RPA19977.719Chrysemys_picta_bellii
ENSBTAG00000009711RPA19941.571ENSCING00000023482-9841.571Ciona_intestinalis
ENSBTAG00000009711RPA19887.107ENSCANG00000030911RPA110087.107Colobus_angolensis_palliatus
ENSBTAG00000009711RPA19989.159ENSCGRG00001008197Rpa19989.159Cricetulus_griseus_chok1gshd
ENSBTAG00000009711RPA18187.771ENSCGRG00000000582Rpa19987.771Cricetulus_griseus_crigri
ENSBTAG00000009711RPA19951.603ENSCSEG00000012726RPA19853.082Cynoglossus_semilaevis
ENSBTAG00000009711RPA19960.556ENSCSEG00000013066rpa19960.556Cynoglossus_semilaevis
ENSBTAG00000009711RPA19552.941ENSCVAG00000013446-9653.023Cyprinodon_variegatus
ENSBTAG00000009711RPA19962.662ENSCVAG00000019431rpa19963.415Cyprinodon_variegatus
ENSBTAG00000009711RPA19963.636ENSDARG00000003938rpa19963.636Danio_rerio
ENSBTAG00000009711RPA19991.598ENSDNOG00000017218RPA19991.598Dasypus_novemcinctus
ENSBTAG00000009711RPA110088.961ENSDORG00000006199Rpa110088.961Dipodomys_ordii
ENSBTAG00000009711RPA19942.811FBgn0010173RpA-709843.317Drosophila_melanogaster
ENSBTAG00000009711RPA18390.625ENSETEG00000017608RPA18290.625Echinops_telfairi
ENSBTAG00000009711RPA19893.189ENSEASG00005009372RPA110090.792Equus_asinus_asinus
ENSBTAG00000009711RPA110093.182ENSECAG00000023886RPA110093.182Equus_caballus
ENSBTAG00000009711RPA16893.333ENSEEUG00000002186-6893.333Erinaceus_europaeus
ENSBTAG00000009711RPA19961.327ENSELUG00000021071rpa19961.489Esox_lucius
ENSBTAG00000009711RPA18855.331ENSELUG00000006136RPA19955.331Esox_lucius
ENSBTAG00000009711RPA110089.627ENSFCAG00000006306RPA19989.627Felis_catus
ENSBTAG00000009711RPA110074.637ENSFALG00000006575RPA19974.637Ficedula_albicollis
ENSBTAG00000009711RPA19988.599ENSFDAG00000007720RPA19988.599Fukomys_damarensis
ENSBTAG00000009711RPA19960.912ENSFHEG00000003580rpa19960.912Fundulus_heteroclitus
ENSBTAG00000009711RPA19958.033ENSGMOG00000010382rpa19958.033Gadus_morhua
ENSBTAG00000009711RPA110075.365ENSGALG00000003072RPA19975.365Gallus_gallus
ENSBTAG00000009711RPA19954.628ENSGAFG00000020953RPA19954.394Gambusia_affinis
ENSBTAG00000009711RPA19961.928ENSGAFG00000012916rpa19961.928Gambusia_affinis
ENSBTAG00000009711RPA19960.454ENSGACG00000010856rpa19960.454Gasterosteus_aculeatus
ENSBTAG00000009711RPA19977.073ENSGAGG00000013611RPA19977.073Gopherus_agassizii
ENSBTAG00000009711RPA110087.338ENSGGOG00000014186RPA110087.338Gorilla_gorilla
ENSBTAG00000009711RPA19653.422ENSHBUG00000009348RPA19953.422Haplochromis_burtoni
ENSBTAG00000009711RPA19962.684ENSHBUG00000017773rpa19962.684Haplochromis_burtoni
ENSBTAG00000009711RPA19988.762ENSHGLG00000008846RPA110088.762Heterocephalus_glaber_female
ENSBTAG00000009711RPA110075.000ENSHGLG00100002005-10075.000Heterocephalus_glaber_male
ENSBTAG00000009711RPA110083.442ENSHGLG00100000799-10083.442Heterocephalus_glaber_male
ENSBTAG00000009711RPA19988.762ENSHGLG00100017755-10088.762Heterocephalus_glaber_male
ENSBTAG00000009711RPA19943.902ENSHCOG00000000351RPA19843.902Hippocampus_comes
ENSBTAG00000009711RPA19960.258ENSHCOG00000001401rpa19960.848Hippocampus_comes
ENSBTAG00000009711RPA19962.036ENSIPUG00000004400rpa19962.036Ictalurus_punctatus
ENSBTAG00000009711RPA19884.704ENSSTOG00000022475RPA19884.704Ictidomys_tridecemlineatus
ENSBTAG00000009711RPA19589.116ENSJJAG00000000876Rpa19889.116Jaculus_jaculus
ENSBTAG00000009711RPA19961.688ENSKMAG00000005605rpa19962.013Kryptolebias_marmoratus
ENSBTAG00000009711RPA19954.723ENSKMAG00000000234RPA19954.723Kryptolebias_marmoratus
ENSBTAG00000009711RPA19961.702ENSLBEG00000021604rpa19961.702Labrus_bergylta
ENSBTAG00000009711RPA19861.678ENSLBEG00000002281RPA18661.678Labrus_bergylta
ENSBTAG00000009711RPA18164.881ENSLACG00000007210RPA19964.881Latimeria_chalumnae
ENSBTAG00000009711RPA19966.667ENSLOCG00000006397rpa19966.667Lepisosteus_oculatus
ENSBTAG00000009711RPA19990.484ENSLAFG00000015354RPA19990.484Loxodonta_africana
ENSBTAG00000009711RPA18790.316ENSMFAG00000036138-10091.124Macaca_fascicularis
ENSBTAG00000009711RPA110082.820ENSMMUG00000002442-10082.820Macaca_mulatta
ENSBTAG00000009711RPA19890.083ENSMMUG00000011604-10090.759Macaca_mulatta
ENSBTAG00000009711RPA18988.000ENSMNEG00000029837-10088.000Macaca_nemestrina
ENSBTAG00000009711RPA110086.688ENSMNEG00000031632-10087.358Macaca_nemestrina
ENSBTAG00000009711RPA19883.855ENSMLEG00000038768-10084.539Mandrillus_leucophaeus
ENSBTAG00000009711RPA19951.335ENSMAMG00000020097RPA19951.335Mastacembelus_armatus
ENSBTAG00000009711RPA19962.684ENSMAMG00000017993rpa19962.684Mastacembelus_armatus
ENSBTAG00000009711RPA19957.524ENSMZEG00005024731RPA19957.524Maylandia_zebra
ENSBTAG00000009711RPA19962.684ENSMZEG00005007551rpa19962.684Maylandia_zebra
ENSBTAG00000009711RPA19975.041ENSMGAG00000005315RPA19975.041Meleagris_gallopavo
ENSBTAG00000009711RPA19789.667ENSMAUG00000010474Rpa19989.667Mesocricetus_auratus
ENSBTAG00000009711RPA110091.396ENSMICG00000012867RPA110091.396Microcebus_murinus
ENSBTAG00000009711RPA19988.254ENSMOCG00000013019Rpa19988.254Microtus_ochrogaster
ENSBTAG00000009711RPA19756.093ENSMMOG00000010868RPA19759.471Mola_mola
ENSBTAG00000009711RPA19961.501ENSMMOG00000014292rpa19962.626Mola_mola
ENSBTAG00000009711RPA19984.228ENSMODG00000010549RPA19984.228Monodelphis_domestica
ENSBTAG00000009711RPA19963.011ENSMALG00000011453rpa19963.175Monopterus_albus
ENSBTAG00000009711RPA19659.956ENSMALG00000001208RPA18259.956Monopterus_albus
ENSBTAG00000009711RPA19987.338MGP_CAROLIEiJ_G0016734Rpa19987.338Mus_caroli
ENSBTAG00000009711RPA19985.048ENSMUSG00000000751Rpa19985.048Mus_musculus
ENSBTAG00000009711RPA19988.368MGP_PahariEiJ_G0017871Rpa19988.368Mus_pahari
ENSBTAG00000009711RPA19985.072MGP_SPRETEiJ_G0017577Rpa19985.072Mus_spretus
ENSBTAG00000009711RPA110092.045ENSMPUG00000013119RPA110092.045Mustela_putorius_furo
ENSBTAG00000009711RPA110089.533ENSMLUG00000006113RPA110089.533Myotis_lucifugus
ENSBTAG00000009711RPA19985.575ENSNGAG00000004522Rpa19785.575Nannospalax_galili
ENSBTAG00000009711RPA19463.448ENSNBRG00000020595rpa19963.448Neolamprologus_brichardi
ENSBTAG00000009711RPA19655.649ENSNBRG00000009672RPA19555.649Neolamprologus_brichardi
ENSBTAG00000009711RPA110089.123ENSNLEG00000017149RPA110089.123Nomascus_leucogenys
ENSBTAG00000009711RPA18890.476ENSMEUG00000006714RPA18490.476Notamacropus_eugenii
ENSBTAG00000009711RPA110082.720ENSODEG00000009038RPA110082.720Octodon_degus
ENSBTAG00000009711RPA19962.885ENSONIG00000013135rpa19962.885Oreochromis_niloticus
ENSBTAG00000009711RPA19883.748ENSOANG00000010880RPA19983.914Ornithorhynchus_anatinus
ENSBTAG00000009711RPA110086.997ENSOCUG00000001504RPA110086.997Oryctolagus_cuniculus
ENSBTAG00000009711RPA19954.128ENSORLG00000003368RPA19954.128Oryzias_latipes
ENSBTAG00000009711RPA19962.459ENSORLG00000004856rpa19962.459Oryzias_latipes
ENSBTAG00000009711RPA19952.632ENSORLG00020015284RPA19952.632Oryzias_latipes_hni
ENSBTAG00000009711RPA19962.623ENSORLG00020008980rpa19962.623Oryzias_latipes_hni
ENSBTAG00000009711RPA17160.000ENSORLG00015005867-9860.000Oryzias_latipes_hsok
ENSBTAG00000009711RPA19954.673ENSORLG00015020383RPA19954.673Oryzias_latipes_hsok
ENSBTAG00000009711RPA19962.623ENSORLG00015013982rpa19962.623Oryzias_latipes_hsok
ENSBTAG00000009711RPA19954.226ENSOMEG00000011040RPA110056.441Oryzias_melastigma
ENSBTAG00000009711RPA19960.820ENSOMEG00000004704rpa19960.820Oryzias_melastigma
ENSBTAG00000009711RPA110091.071ENSOGAG00000005581-10091.071Otolemur_garnettii
ENSBTAG00000009711RPA19488.772ENSOGAG00000029379-10088.772Otolemur_garnettii
ENSBTAG00000009711RPA110098.701ENSOARG00000014479RPA110098.701Ovis_aries
ENSBTAG00000009711RPA110089.773ENSPPAG00000039680RPA110089.773Pan_paniscus
ENSBTAG00000009711RPA110089.303ENSPPRG00000011807RPA19989.303Panthera_pardus
ENSBTAG00000009711RPA110089.465ENSPTIG00000007898RPA19989.465Panthera_tigris_altaica
ENSBTAG00000009711RPA110089.773ENSPTRG00000008539RPA110089.773Pan_troglodytes
ENSBTAG00000009711RPA110089.935ENSPANG00000024592RPA110090.600Papio_anubis
ENSBTAG00000009711RPA19461.063ENSPKIG00000008053rpa19461.644Paramormyrops_kingsleyae
ENSBTAG00000009711RPA19776.461ENSPSIG00000015617RPA19976.461Pelodiscus_sinensis
ENSBTAG00000009711RPA19953.462ENSPMGG00000000543RPA19955.888Periophthalmus_magnuspinnatus
ENSBTAG00000009711RPA19861.526ENSPMGG00000011589rpa19961.692Periophthalmus_magnuspinnatus
ENSBTAG00000009711RPA19989.886ENSPEMG00000021061Rpa19989.886Peromyscus_maniculatus_bairdii
ENSBTAG00000009711RPA110082.496ENSPCIG00000019049RPA19982.714Phascolarctos_cinereus
ENSBTAG00000009711RPA19961.789ENSPFOG00000003987rpa19961.789Poecilia_formosa
ENSBTAG00000009711RPA19454.093ENSPLAG00000008844-9754.093Poecilia_latipinna
ENSBTAG00000009711RPA19961.463ENSPLAG00000004984rpa19961.463Poecilia_latipinna
ENSBTAG00000009711RPA19961.951ENSPMEG00000020602rpa19962.694Poecilia_mexicana
ENSBTAG00000009711RPA19454.180ENSPMEG00000003627-9753.945Poecilia_mexicana
ENSBTAG00000009711RPA19952.733ENSPREG00000010119RPA110052.322Poecilia_reticulata
ENSBTAG00000009711RPA19454.281ENSPREG00000010174rpa19555.323Poecilia_reticulata
ENSBTAG00000009711RPA110091.558ENSPCOG00000001799RPA110091.558Propithecus_coquereli
ENSBTAG00000009711RPA110092.695ENSPVAG00000002149RPA110092.695Pteropus_vampyrus
ENSBTAG00000009711RPA19962.848ENSPNYG00000016316rpa19963.605Pundamilia_nyererei
ENSBTAG00000009711RPA19957.210ENSPNYG00000024165RPA19957.210Pundamilia_nyererei
ENSBTAG00000009711RPA18471.429ENSPNAG00000008599rpa19656.529Pygocentrus_nattereri
ENSBTAG00000009711RPA19988.418ENSRNOG00000003123Rpa19988.418Rattus_norvegicus
ENSBTAG00000009711RPA110090.113ENSRBIG00000036587RPA110090.113Rhinopithecus_bieti
ENSBTAG00000009711RPA110090.189ENSRROG00000043278RPA110090.189Rhinopithecus_roxellana
ENSBTAG00000009711RPA19732.570YAR007CRFA19732.570Saccharomyces_cerevisiae
ENSBTAG00000009711RPA19885.927ENSSBOG00000030233RPA19985.927Saimiri_boliviensis_boliviensis
ENSBTAG00000009711RPA19983.797ENSSHAG00000007969RPA19883.961Sarcophilus_harrisii
ENSBTAG00000009711RPA19963.902ENSSFOG00015005362rpa19263.902Scleropages_formosus
ENSBTAG00000009711RPA19952.496ENSSMAG00000019746RPA19952.273Scophthalmus_maximus
ENSBTAG00000009711RPA18964.434ENSSDUG00000016358RPA18163.946Seriola_dumerili
ENSBTAG00000009711RPA19964.157ENSSDUG00000011949rpa19964.157Seriola_dumerili
ENSBTAG00000009711RPA19963.993ENSSLDG00000011806rpa19963.993Seriola_lalandi_dorsalis
ENSBTAG00000009711RPA18964.733ENSSLDG00000020784RPA18064.384Seriola_lalandi_dorsalis
ENSBTAG00000009711RPA19382.353ENSSARG00000007506RPA18982.353Sorex_araneus
ENSBTAG00000009711RPA19772.819ENSSPUG00000007223RPA19972.819Sphenodon_punctatus
ENSBTAG00000009711RPA19962.684ENSSPAG00000009903rpa19962.684Stegastes_partitus
ENSBTAG00000009711RPA19658.179ENSSPAG00000011165RPA19757.647Stegastes_partitus
ENSBTAG00000009711RPA19894.859ENSSSCG00000017822RPA110094.859Sus_scrofa
ENSBTAG00000009711RPA110074.392ENSTGUG00000005775RPA19974.392Taeniopygia_guttata
ENSBTAG00000009711RPA19963.322ENSTRUG00000003616rpa19963.322Takifugu_rubripes
ENSBTAG00000009711RPA19958.197ENSTRUG00000000405RPA18658.197Takifugu_rubripes
ENSBTAG00000009711RPA19963.785ENSTNIG00000016199rpa19963.785Tetraodon_nigroviridis
ENSBTAG00000009711RPA187100.000ENSTBEG00000002709RPA189100.000Tupaia_belangeri
ENSBTAG00000009711RPA19993.659ENSTTRG00000001169RPA19993.659Tursiops_truncatus
ENSBTAG00000009711RPA18992.070ENSUAMG00000015676RPA19991.908Ursus_americanus
ENSBTAG00000009711RPA110092.370ENSUMAG00000009328RPA110092.370Ursus_maritimus
ENSBTAG00000009711RPA110093.019ENSVPAG00000009443RPA110093.019Vicugna_pacos
ENSBTAG00000009711RPA110092.208ENSVVUG00000021715RPA110092.208Vulpes_vulpes
ENSBTAG00000009711RPA19974.632ENSXETG00000013538rpa19975.654Xenopus_tropicalis
ENSBTAG00000009711RPA19360.105ENSXCOG00000010068rpa19461.261Xiphophorus_couchianus
ENSBTAG00000009711RPA19555.688ENSXCOG00000009899-9955.688Xiphophorus_couchianus
ENSBTAG00000009711RPA19960.650ENSXMAG00000004102rpa19962.238Xiphophorus_maculatus
ENSBTAG00000009711RPA19958.990ENSXMAG00000010333RPA19358.990Xiphophorus_maculatus

Copyright © 2019-2026, Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us