EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000009732 (Gene tree)
Gene ID: 100124428
Gene Symbol: NCBP1
Alias: -
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 37282 bases
Position: chr8:62840870-62878151
Accession: 31907
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000053621	MIF4G_like	PF09088.11	2.3e-36	1	1
ENSBTAP00000053621	MIF4G_like_2	PF09090.11	1.4e-85	1	1
ENSBTAP00000012833	MIF4G	PF02854.19	2.2e-31	1	1
ENSBTAP00000053621	MIF4G	PF02854.19	1.7e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000061170	-	2520	-	ENSBTAP00000053621	790 (aa)	XP_003586450	E1BMM0
ENSBTAT00000012833	-	4864	-	ENSBTAP00000012833	332 (aa)	-	A6QNR9

Gene Model

Click here to download ENSBTAG00000009732's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03013	RNA transport	KEGG
bta03015	mRNA surveillance pathway	KEGG
bta03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000009732's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000009732	NCBP1	100	99.114	ENSG00000136937	NCBP1	100	99.114	Homo_sapiens
ENSBTAG00000009732	NCBP1	99	88.520	ENSAPOG00000008002	NCBP1	99	83.123	Acanthochromis_polyacanthus
ENSBTAG00000009732	NCBP1	100	99.116	ENSAMEG00000004763	NCBP1	100	99.116	Ailuropoda_melanoleuca
ENSBTAG00000009732	NCBP1	99	88.218	ENSACIG00000000274	NCBP1	99	83.480	Amphilophus_citrinellus
ENSBTAG00000009732	NCBP1	99	88.218	ENSAOCG00000021148	NCBP1	99	83.249	Amphiprion_ocellaris
ENSBTAG00000009732	NCBP1	99	88.218	ENSAPEG00000001701	NCBP1	99	83.249	Amphiprion_percula
ENSBTAG00000009732	NCBP1	99	87.613	ENSATEG00000006929	NCBP1	99	82.872	Anabas_testudineus
ENSBTAG00000009732	NCBP1	95	90.357	ENSAPLG00000016318	NCBP1	100	90.489	Anas_platyrhynchos
ENSBTAG00000009732	NCBP1	99	90.634	ENSACAG00000004409	NCBP1	87	87.266	Anolis_carolinensis
ENSBTAG00000009732	NCBP1	100	96.203	ENSANAG00000025744	NCBP1	99	99.161	Aotus_nancymaae
ENSBTAG00000009732	NCBP1	99	87.613	ENSACLG00000014812	NCBP1	99	82.821	Astatotilapia_calliptera
ENSBTAG00000009732	NCBP1	99	88.218	ENSAMXG00000016364	NCBP1	99	81.533	Astyanax_mexicanus
ENSBTAG00000009732	NCBP1	99	41.916	WBGene00018156	ncbp-1	99	34.279	Caenorhabditis_elegans
ENSBTAG00000009732	NCBP1	100	99.114	ENSCJAG00000010840	NCBP1	100	99.390	Callithrix_jacchus
ENSBTAG00000009732	NCBP1	100	99.494	ENSCAFG00000002445	NCBP1	100	99.494	Canis_familiaris
ENSBTAG00000009732	NCBP1	99	98.606	ENSCAFG00020017997	NCBP1	100	99.414	Canis_lupus_dingo
ENSBTAG00000009732	NCBP1	100	99.494	ENSCHIG00000020139	NCBP1	100	99.494	Capra_hircus
ENSBTAG00000009732	NCBP1	96	98.750	ENSTSYG00000011914	NCBP1	99	98.750	Carlito_syrichta
ENSBTAG00000009732	NCBP1	77	98.047	ENSCAPG00000014252	NCBP1	90	88.594	Cavia_aperea
ENSBTAG00000009732	NCBP1	97	97.132	ENSCPOG00000012573	NCBP1	99	97.132	Cavia_porcellus
ENSBTAG00000009732	NCBP1	100	99.241	ENSCCAG00000032297	NCBP1	100	99.241	Cebus_capucinus
ENSBTAG00000009732	NCBP1	100	99.114	ENSCATG00000010052	NCBP1	100	99.114	Cercocebus_atys
ENSBTAG00000009732	NCBP1	100	99.114	ENSCLAG00000014339	NCBP1	100	99.114	Chinchilla_lanigera
ENSBTAG00000009732	NCBP1	100	99.114	ENSCSAG00000010929	NCBP1	100	99.114	Chlorocebus_sabaeus
ENSBTAG00000009732	NCBP1	91	97.458	ENSCHOG00000010332	NCBP1	91	97.458	Choloepus_hoffmanni
ENSBTAG00000009732	NCBP1	99	92.749	ENSCPBG00000024344	NCBP1	99	90.278	Chrysemys_picta_bellii
ENSBTAG00000009732	NCBP1	98	56.135	ENSCING00000008990	-	99	53.856	Ciona_intestinalis
ENSBTAG00000009732	NCBP1	97	55.864	ENSCSAVG00000005300	-	99	53.927	Ciona_savignyi
ENSBTAG00000009732	NCBP1	100	99.114	ENSCANG00000036913	NCBP1	100	99.114	Colobus_angolensis_palliatus
ENSBTAG00000009732	NCBP1	100	97.975	ENSCGRG00001015771	Ncbp1	100	97.975	Cricetulus_griseus_chok1gshd
ENSBTAG00000009732	NCBP1	99	98.077	ENSCGRG00000010311	Ncbp1	100	98.077	Cricetulus_griseus_crigri
ENSBTAG00000009732	NCBP1	99	87.613	ENSCSEG00000012377	NCBP1	99	83.217	Cynoglossus_semilaevis
ENSBTAG00000009732	NCBP1	99	86.707	ENSCVAG00000008795	NCBP1	99	81.635	Cyprinodon_variegatus
ENSBTAG00000009732	NCBP1	100	98.228	ENSDNOG00000006885	NCBP1	100	98.228	Dasypus_novemcinctus
ENSBTAG00000009732	NCBP1	100	93.703	ENSDORG00000013652	Ncbp1	100	93.703	Dipodomys_ordii
ENSBTAG00000009732	NCBP1	99	59.159	FBgn0022942	Cbp80	100	57.750	Drosophila_melanogaster
ENSBTAG00000009732	NCBP1	84	34.018	FBgn0038887	CG7907	87	34.018	Drosophila_melanogaster
ENSBTAG00000009732	NCBP1	89	94.105	ENSETEG00000009705	NCBP1	89	94.105	Echinops_telfairi
ENSBTAG00000009732	NCBP1	99	75.676	ENSEBUG00000008386	NCBP1	100	73.333	Eptatretus_burgeri
ENSBTAG00000009732	NCBP1	100	98.987	ENSEASG00005022795	NCBP1	100	98.987	Equus_asinus_asinus
ENSBTAG00000009732	NCBP1	100	99.114	ENSECAG00000013847	NCBP1	100	99.114	Equus_caballus
ENSBTAG00000009732	NCBP1	99	95.468	ENSEEUG00000015973	NCBP1	99	93.493	Erinaceus_europaeus
ENSBTAG00000009732	NCBP1	99	86.405	ENSELUG00000022519	NCBP1	99	81.509	Esox_lucius
ENSBTAG00000009732	NCBP1	100	99.367	ENSFCAG00000001206	NCBP1	100	99.367	Felis_catus
ENSBTAG00000009732	NCBP1	96	91.223	ENSFALG00000001193	NCBP1	100	89.313	Ficedula_albicollis
ENSBTAG00000009732	NCBP1	100	98.861	ENSFDAG00000010864	NCBP1	100	98.861	Fukomys_damarensis
ENSBTAG00000009732	NCBP1	99	87.009	ENSFHEG00000000655	NCBP1	99	82.013	Fundulus_heteroclitus
ENSBTAG00000009732	NCBP1	99	85.498	ENSGMOG00000008653	NCBP1	99	79.748	Gadus_morhua
ENSBTAG00000009732	NCBP1	98	90.372	ENSGALG00000002087	NCBP1	100	90.038	Gallus_gallus
ENSBTAG00000009732	NCBP1	99	87.613	ENSGAFG00000017787	NCBP1	99	82.890	Gambusia_affinis
ENSBTAG00000009732	NCBP1	99	86.446	ENSGACG00000016772	NCBP1	98	81.932	Gasterosteus_aculeatus
ENSBTAG00000009732	NCBP1	99	90.332	ENSGAGG00000019483	NCBP1	99	90.000	Gopherus_agassizii
ENSBTAG00000009732	NCBP1	100	99.114	ENSGGOG00000001376	NCBP1	100	99.114	Gorilla_gorilla
ENSBTAG00000009732	NCBP1	99	87.613	ENSHBUG00000020843	NCBP1	99	82.620	Haplochromis_burtoni
ENSBTAG00000009732	NCBP1	100	98.987	ENSHGLG00000001882	NCBP1	100	98.987	Heterocephalus_glaber_female
ENSBTAG00000009732	NCBP1	100	86.364	ENSHGLG00000018112	-	100	86.364	Heterocephalus_glaber_female
ENSBTAG00000009732	NCBP1	100	86.111	ENSHGLG00100017373	-	100	86.111	Heterocephalus_glaber_male
ENSBTAG00000009732	NCBP1	100	98.987	ENSHGLG00100013014	NCBP1	100	98.987	Heterocephalus_glaber_male
ENSBTAG00000009732	NCBP1	79	72.222	ENSHCOG00000000204	NCBP1	92	72.222	Hippocampus_comes
ENSBTAG00000009732	NCBP1	99	86.707	ENSIPUG00000007275	ncbp1	99	82.013	Ictalurus_punctatus
ENSBTAG00000009732	NCBP1	100	98.987	ENSSTOG00000002695	NCBP1	100	98.987	Ictidomys_tridecemlineatus
ENSBTAG00000009732	NCBP1	99	86.707	ENSKMAG00000003594	NCBP1	99	86.382	Kryptolebias_marmoratus
ENSBTAG00000009732	NCBP1	99	86.405	ENSLBEG00000011661	NCBP1	99	80.745	Labrus_bergylta
ENSBTAG00000009732	NCBP1	99	86.787	ENSLACG00000013955	NCBP1	100	79.602	Latimeria_chalumnae
ENSBTAG00000009732	NCBP1	99	72.943	ENSLOCG00000009579	NCBP1	99	72.569	Lepisosteus_oculatus
ENSBTAG00000009732	NCBP1	100	98.481	ENSLAFG00000005999	NCBP1	100	98.481	Loxodonta_africana
ENSBTAG00000009732	NCBP1	100	99.114	ENSMFAG00000030994	NCBP1	100	99.114	Macaca_fascicularis
ENSBTAG00000009732	NCBP1	99	99.101	ENSMMUG00000012281	NCBP1	99	99.101	Macaca_mulatta
ENSBTAG00000009732	NCBP1	100	99.114	ENSMNEG00000042790	NCBP1	100	99.114	Macaca_nemestrina
ENSBTAG00000009732	NCBP1	100	99.114	ENSMLEG00000030374	NCBP1	100	99.114	Mandrillus_leucophaeus
ENSBTAG00000009732	NCBP1	99	87.613	ENSMAMG00000014806	NCBP1	99	82.997	Mastacembelus_armatus
ENSBTAG00000009732	NCBP1	93	87.419	ENSMZEG00005009290	-	99	82.552	Maylandia_zebra
ENSBTAG00000009732	NCBP1	99	87.613	ENSMZEG00005003469	NCBP1	99	82.620	Maylandia_zebra
ENSBTAG00000009732	NCBP1	99	97.583	ENSMAUG00000020583	Ncbp1	99	97.328	Mesocricetus_auratus
ENSBTAG00000009732	NCBP1	100	98.734	ENSMICG00000012682	NCBP1	100	98.734	Microcebus_murinus
ENSBTAG00000009732	NCBP1	100	97.595	ENSMOCG00000015818	Ncbp1	100	97.595	Microtus_ochrogaster
ENSBTAG00000009732	NCBP1	91	82.378	ENSMMOG00000002610	NCBP1	99	82.238	Mola_mola
ENSBTAG00000009732	NCBP1	100	93.544	ENSMODG00000003202	NCBP1	99	93.291	Monodelphis_domestica
ENSBTAG00000009732	NCBP1	99	87.613	ENSMALG00000003547	NCBP1	99	82.116	Monopterus_albus
ENSBTAG00000009732	NCBP1	100	97.722	MGP_CAROLIEiJ_G0025982	Ncbp1	100	97.722	Mus_caroli
ENSBTAG00000009732	NCBP1	100	97.722	ENSMUSG00000028330	Ncbp1	100	97.722	Mus_musculus
ENSBTAG00000009732	NCBP1	100	98.101	MGP_PahariEiJ_G0028318	Ncbp1	100	98.101	Mus_pahari
ENSBTAG00000009732	NCBP1	100	97.722	MGP_SPRETEiJ_G0026945	Ncbp1	100	97.722	Mus_spretus
ENSBTAG00000009732	NCBP1	100	99.367	ENSMPUG00000006399	NCBP1	100	99.367	Mustela_putorius_furo
ENSBTAG00000009732	NCBP1	99	97.689	ENSMLUG00000015201	NCBP1	100	97.689	Myotis_lucifugus
ENSBTAG00000009732	NCBP1	100	97.975	ENSNGAG00000014101	Ncbp1	100	97.975	Nannospalax_galili
ENSBTAG00000009732	NCBP1	76	86.344	ENSNBRG00000014674	NCBP1	97	86.344	Neolamprologus_brichardi
ENSBTAG00000009732	NCBP1	100	99.114	ENSNLEG00000016909	NCBP1	100	99.114	Nomascus_leucogenys
ENSBTAG00000009732	NCBP1	96	91.509	ENSMEUG00000010672	NCBP1	90	92.793	Notamacropus_eugenii
ENSBTAG00000009732	NCBP1	84	92.203	ENSOPRG00000002144	-	88	92.203	Ochotona_princeps
ENSBTAG00000009732	NCBP1	100	98.861	ENSODEG00000003232	NCBP1	100	98.861	Octodon_degus
ENSBTAG00000009732	NCBP1	99	88.218	ENSONIG00000001502	NCBP1	99	82.620	Oreochromis_niloticus
ENSBTAG00000009732	NCBP1	96	94.375	ENSOANG00000001918	NCBP1	100	95.666	Ornithorhynchus_anatinus
ENSBTAG00000009732	NCBP1	99	97.598	ENSOCUG00000013853	NCBP1	97	98.201	Oryctolagus_cuniculus
ENSBTAG00000009732	NCBP1	99	87.009	ENSORLG00000011008	NCBP1	99	80.952	Oryzias_latipes
ENSBTAG00000009732	NCBP1	99	87.009	ENSORLG00020017455	NCBP1	99	80.952	Oryzias_latipes_hni
ENSBTAG00000009732	NCBP1	99	87.009	ENSORLG00015012127	NCBP1	99	81.078	Oryzias_latipes_hsok
ENSBTAG00000009732	NCBP1	99	87.915	ENSOMEG00000020698	NCBP1	99	81.830	Oryzias_melastigma
ENSBTAG00000009732	NCBP1	100	99.116	ENSOGAG00000013888	NCBP1	100	99.116	Otolemur_garnettii
ENSBTAG00000009732	NCBP1	100	99.494	ENSOARG00000011233	NCBP1	100	99.494	Ovis_aries
ENSBTAG00000009732	NCBP1	100	99.114	ENSPPAG00000026462	NCBP1	100	99.114	Pan_paniscus
ENSBTAG00000009732	NCBP1	100	99.494	ENSPPRG00000022574	NCBP1	100	99.494	Panthera_pardus
ENSBTAG00000009732	NCBP1	100	99.494	ENSPTIG00000018507	NCBP1	100	99.494	Panthera_tigris_altaica
ENSBTAG00000009732	NCBP1	100	99.114	ENSPTRG00000021167	NCBP1	100	99.114	Pan_troglodytes
ENSBTAG00000009732	NCBP1	100	99.114	ENSPANG00000025591	NCBP1	100	99.114	Papio_anubis
ENSBTAG00000009732	NCBP1	99	87.613	ENSPKIG00000015861	NCBP1	100	81.132	Paramormyrops_kingsleyae
ENSBTAG00000009732	NCBP1	64	89.258	ENSPSIG00000009558	NCBP1	100	89.453	Pelodiscus_sinensis
ENSBTAG00000009732	NCBP1	93	86.452	ENSPMGG00000020476	NCBP1	99	79.345	Periophthalmus_magnuspinnatus
ENSBTAG00000009732	NCBP1	100	97.468	ENSPEMG00000020105	Ncbp1	100	97.468	Peromyscus_maniculatus_bairdii
ENSBTAG00000009732	NCBP1	99	78.078	ENSPMAG00000005533	NCBP1	100	67.746	Petromyzon_marinus
ENSBTAG00000009732	NCBP1	100	93.544	ENSPCIG00000015800	NCBP1	99	94.715	Phascolarctos_cinereus
ENSBTAG00000009732	NCBP1	99	87.009	ENSPFOG00000004158	NCBP1	99	81.955	Poecilia_formosa
ENSBTAG00000009732	NCBP1	99	86.707	ENSPLAG00000020002	NCBP1	99	82.264	Poecilia_latipinna
ENSBTAG00000009732	NCBP1	99	87.009	ENSPMEG00000019821	NCBP1	99	82.390	Poecilia_mexicana
ENSBTAG00000009732	NCBP1	99	87.009	ENSPREG00000006035	NCBP1	99	82.161	Poecilia_reticulata
ENSBTAG00000009732	NCBP1	100	99.114	ENSPPYG00000019426	NCBP1	100	99.114	Pongo_abelii
ENSBTAG00000009732	NCBP1	99	89.124	ENSPCAG00000009943	NCBP1	90	89.683	Procavia_capensis
ENSBTAG00000009732	NCBP1	82	99.390	ENSPCOG00000020024	NCBP1	98	99.390	Propithecus_coquereli
ENSBTAG00000009732	NCBP1	100	98.861	ENSPVAG00000005924	NCBP1	100	98.861	Pteropus_vampyrus
ENSBTAG00000009732	NCBP1	91	82.961	ENSPNYG00000002140	NCBP1	99	82.821	Pundamilia_nyererei
ENSBTAG00000009732	NCBP1	99	87.311	ENSPNAG00000027753	NCBP1	99	82.286	Pygocentrus_nattereri
ENSBTAG00000009732	NCBP1	100	97.975	ENSRNOG00000023605	Ncbp1	100	97.975	Rattus_norvegicus
ENSBTAG00000009732	NCBP1	100	99.114	ENSRBIG00000043175	NCBP1	100	99.114	Rhinopithecus_bieti
ENSBTAG00000009732	NCBP1	100	99.114	ENSRROG00000029767	NCBP1	100	99.114	Rhinopithecus_roxellana
ENSBTAG00000009732	NCBP1	100	99.241	ENSSBOG00000019378	NCBP1	100	99.241	Saimiri_boliviensis_boliviensis
ENSBTAG00000009732	NCBP1	69	95.720	ENSSHAG00000015882	NCBP1	73	95.720	Sarcophilus_harrisii
ENSBTAG00000009732	NCBP1	96	85.938	ENSSFOG00015001872	NCBP1	100	80.886	Scleropages_formosus
ENSBTAG00000009732	NCBP1	99	86.405	ENSSMAG00000007463	NCBP1	99	81.612	Scophthalmus_maximus
ENSBTAG00000009732	NCBP1	99	87.613	ENSSDUG00000007019	NCBP1	100	82.990	Seriola_dumerili
ENSBTAG00000009732	NCBP1	99	87.613	ENSSLDG00000021924	NCBP1	99	82.746	Seriola_lalandi_dorsalis
ENSBTAG00000009732	NCBP1	85	90.611	ENSSARG00000007274	NCBP1	87	90.611	Sorex_araneus
ENSBTAG00000009732	NCBP1	100	81.899	ENSSPUG00000008609	NCBP1	100	81.899	Sphenodon_punctatus
ENSBTAG00000009732	NCBP1	99	88.218	ENSSPAG00000012550	NCBP1	99	83.249	Stegastes_partitus
ENSBTAG00000009732	NCBP1	100	99.241	ENSSSCG00000005366	NCBP1	100	99.241	Sus_scrofa
ENSBTAG00000009732	NCBP1	100	83.648	ENSTGUG00000001472	NCBP1	100	83.774	Taeniopygia_guttata
ENSBTAG00000009732	NCBP1	99	86.405	ENSTRUG00000005287	NCBP1	99	81.738	Takifugu_rubripes
ENSBTAG00000009732	NCBP1	99	98.489	ENSTBEG00000004035	NCBP1	100	95.443	Tupaia_belangeri
ENSBTAG00000009732	NCBP1	88	99.593	ENSTTRG00000000507	NCBP1	88	99.593	Tursiops_truncatus
ENSBTAG00000009732	NCBP1	100	99.367	ENSUAMG00000005471	NCBP1	100	99.367	Ursus_americanus
ENSBTAG00000009732	NCBP1	97	97.009	ENSUMAG00000011865	NCBP1	100	99.414	Ursus_maritimus
ENSBTAG00000009732	NCBP1	100	95.063	ENSVPAG00000010537	NCBP1	100	95.063	Vicugna_pacos
ENSBTAG00000009732	NCBP1	100	99.494	ENSVVUG00000019725	NCBP1	100	99.494	Vulpes_vulpes
ENSBTAG00000009732	NCBP1	100	81.290	ENSXETG00000010179	ncbp1	100	81.290	Xenopus_tropicalis
ENSBTAG00000009732	NCBP1	99	87.311	ENSXMAG00000018253	NCBP1	99	82.390	Xiphophorus_maculatus