EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSBTAG00000009906 (Gene tree)
Gene ID
510816
Gene Symbol
DDX1
Alias
-
Full Name
DEAD-box helicase 1
Gene Type
protein_coding
Species
Bos_taurus
Status
putative
Strand
Minus strand
Length
39715 bases
Position
chr11:82677576-82717290
Accession
27955
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSBTAP00000068212DEADPF00270.294e-8011
ENSBTAP00000013075DEADPF00270.294.2e-8011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSBTAT00000013075-2250-ENSBTAP00000013075749 (aa)XP_005213020Q0IIK5
ENSBTAT00000085951-2902-ENSBTAP00000068212740 (aa)-UPI00005C1028
Gene Model
Click here to download ENSBTAG00000009906's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000009906's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSBTAG00000009906DDX15338.710ENSBTAG00000004290DDX286738.710
ENSBTAG00000009906DDX15448.333ENSBTAG00000019608DDX477448.333
ENSBTAG00000009906DDX15447.541ENSBTAG00000010602DDX566847.541
ENSBTAG00000009906DDX15636.765ENSBTAG00000010313DDX525941.071
ENSBTAG00000009906DDX15442.424ENSBTAG00000000811DDX497142.424
ENSBTAG00000009906DDX15145.098ENSBTAG00000009067DDX67045.098
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSBTAG00000009906DDX110097.297ENSG00000079785DDX110097.297Homo_sapiens
ENSBTAG00000009906DDX110084.865ENSAPOG00000003166ddx110084.865Acanthochromis_polyacanthus
ENSBTAG00000009906DDX19998.106ENSAMEG00000001071DDX19998.106Ailuropoda_melanoleuca
ENSBTAG00000009906DDX18983.664ENSACIG00000017422ddx19983.053Amphilophus_citrinellus
ENSBTAG00000009906DDX18982.523ENSAOCG00000015436ddx19484.119Amphiprion_ocellaris
ENSBTAG00000009906DDX110085.405ENSAPEG00000007699ddx110085.405Amphiprion_percula
ENSBTAG00000009906DDX19484.814ENSATEG00000003965ddx19884.427Anabas_testudineus
ENSBTAG00000009906DDX110092.473ENSAPLG00000011093DDX110092.473Anas_platyrhynchos
ENSBTAG00000009906DDX19491.404ENSACAG00000011036DDX19991.404Anolis_carolinensis
ENSBTAG00000009906DDX110097.297ENSANAG00000037912DDX110097.297Aotus_nancymaae
ENSBTAG00000009906DDX19985.075ENSACLG00000008850ddx19984.098Astatotilapia_calliptera
ENSBTAG00000009906DDX110085.000ENSAMXG00000002100ddx110085.000Astyanax_mexicanus
ENSBTAG00000009906DDX19847.568WBGene00021938Y55F3BR.19847.568Caenorhabditis_elegans
ENSBTAG00000009906DDX110097.297ENSCJAG00000007076DDX110097.297Callithrix_jacchus
ENSBTAG00000009906DDX110098.378ENSCAFG00000003686DDX110098.378Canis_familiaris
ENSBTAG00000009906DDX110098.378ENSCAFG00020026083DDX110098.378Canis_lupus_dingo
ENSBTAG00000009906DDX110099.189ENSCHIG00000011046DDX110099.189Capra_hircus
ENSBTAG00000009906DDX110097.838ENSTSYG00000002477-10097.838Carlito_syrichta
ENSBTAG00000009906DDX19969.878ENSTSYG00000037396-9873.222Carlito_syrichta
ENSBTAG00000009906DDX18677.449ENSCAPG00000008906-9377.449Cavia_aperea
ENSBTAG00000009906DDX18894.181ENSCPOG00000009816-9694.181Cavia_porcellus
ENSBTAG00000009906DDX16895.418ENSCPOG00000032467-10095.418Cavia_porcellus
ENSBTAG00000009906DDX110097.297ENSCCAG00000030085DDX110097.297Cebus_capucinus
ENSBTAG00000009906DDX110097.162ENSCATG00000033924DDX110097.162Cercocebus_atys
ENSBTAG00000009906DDX110097.027ENSCLAG00000005434DDX110097.027Chinchilla_lanigera
ENSBTAG00000009906DDX110097.162ENSCSAG00000007883DDX110097.162Chlorocebus_sabaeus
ENSBTAG00000009906DDX17398.337ENSCHOG00000002171DDX17498.337Choloepus_hoffmanni
ENSBTAG00000009906DDX19987.364ENSCPBG00000013330DDX19992.593Chrysemys_picta_bellii
ENSBTAG00000009906DDX110065.282ENSCING00000001176-10065.154Ciona_intestinalis
ENSBTAG00000009906DDX19860.302ENSCSAVG00000003028-9960.302Ciona_savignyi
ENSBTAG00000009906DDX110097.027ENSCANG00000031530DDX110097.027Colobus_angolensis_palliatus
ENSBTAG00000009906DDX110097.162ENSCGRG00001013025Ddx110097.162Cricetulus_griseus_chok1gshd
ENSBTAG00000009906DDX110097.162ENSCGRG00000000676Ddx110097.162Cricetulus_griseus_crigri
ENSBTAG00000009906DDX19985.150ENSCSEG00000002630ddx110085.150Cynoglossus_semilaevis
ENSBTAG00000009906DDX19984.605ENSCVAG00000020927ddx110084.605Cyprinodon_variegatus
ENSBTAG00000009906DDX110084.865ENSDARG00000032117ddx110084.877Danio_rerio
ENSBTAG00000009906DDX110097.568ENSDNOG00000006905DDX110097.568Dasypus_novemcinctus
ENSBTAG00000009906DDX110097.432ENSDORG00000012847Ddx110097.432Dipodomys_ordii
ENSBTAG00000009906DDX19859.371FBgn0015075Ddx19959.918Drosophila_melanogaster
ENSBTAG00000009906DDX110086.486ENSETEG00000014259DDX110086.486Echinops_telfairi
ENSBTAG00000009906DDX16477.966ENSEBUG00000009800-9977.966Eptatretus_burgeri
ENSBTAG00000009906DDX110098.243ENSEASG00005009335DDX19298.243Equus_asinus_asinus
ENSBTAG00000009906DDX19498.278ENSECAG00000016396DDX110098.278Equus_caballus
ENSBTAG00000009906DDX18995.104ENSEEUG00000001606DDX18995.104Erinaceus_europaeus
ENSBTAG00000009906DDX110082.456ENSELUG00000006743ddx110082.456Esox_lucius
ENSBTAG00000009906DDX110098.378ENSFCAG00000004680DDX110098.378Felis_catus
ENSBTAG00000009906DDX110092.703ENSFALG00000008696DDX110092.703Ficedula_albicollis
ENSBTAG00000009906DDX110096.622ENSFDAG00000021305DDX110096.622Fukomys_damarensis
ENSBTAG00000009906DDX110083.514ENSFHEG00000008444ddx110083.514Fundulus_heteroclitus
ENSBTAG00000009906DDX110081.561ENSGMOG00000011300ddx110081.561Gadus_morhua
ENSBTAG00000009906DDX110093.514ENSGALG00000016461DDX110093.514Gallus_gallus
ENSBTAG00000009906DDX110084.459ENSGAFG00000004706ddx110084.459Gambusia_affinis
ENSBTAG00000009906DDX110082.838ENSGACG00000011162ddx110082.838Gasterosteus_aculeatus
ENSBTAG00000009906DDX110093.649ENSGAGG00000021020DDX110093.649Gopherus_agassizii
ENSBTAG00000009906DDX110097.297ENSGGOG00000012482DDX110097.297Gorilla_gorilla
ENSBTAG00000009906DDX110085.000ENSHBUG00000014069ddx110085.000Haplochromis_burtoni
ENSBTAG00000009906DDX110096.757ENSHGLG00000000801DDX110096.757Heterocephalus_glaber_female
ENSBTAG00000009906DDX19996.730ENSHGLG00100000711DDX110096.730Heterocephalus_glaber_male
ENSBTAG00000009906DDX110084.730ENSHCOG00000011492ddx19684.730Hippocampus_comes
ENSBTAG00000009906DDX110082.838ENSIPUG00000003494ddx110082.838Ictalurus_punctatus
ENSBTAG00000009906DDX19997.684ENSSTOG00000003977DDX110097.684Ictidomys_tridecemlineatus
ENSBTAG00000009906DDX18993.282ENSJJAG00000013315Ddx110093.588Jaculus_jaculus
ENSBTAG00000009906DDX110086.081ENSKMAG00000011340ddx110086.081Kryptolebias_marmoratus
ENSBTAG00000009906DDX18879.389ENSLBEG00000008692ddx19979.389Labrus_bergylta
ENSBTAG00000009906DDX110087.838ENSLACG00000010529DDX110087.838Latimeria_chalumnae
ENSBTAG00000009906DDX110087.399ENSLOCG00000016473ddx110087.399Lepisosteus_oculatus
ENSBTAG00000009906DDX19997.965ENSLAFG00000002213DDX19997.965Loxodonta_africana
ENSBTAG00000009906DDX110097.162ENSMFAG00000033987DDX110097.162Macaca_fascicularis
ENSBTAG00000009906DDX110097.162ENSMMUG00000023437DDX110097.162Macaca_mulatta
ENSBTAG00000009906DDX110097.162ENSMNEG00000029189DDX110097.162Macaca_nemestrina
ENSBTAG00000009906DDX110097.027ENSMLEG00000030787DDX110097.027Mandrillus_leucophaeus
ENSBTAG00000009906DDX110085.405ENSMAMG00000015916ddx110085.405Mastacembelus_armatus
ENSBTAG00000009906DDX19985.075ENSMZEG00005015207ddx19984.098Maylandia_zebra
ENSBTAG00000009906DDX19989.431ENSMGAG00000014025DDX110089.431Meleagris_gallopavo
ENSBTAG00000009906DDX16498.182ENSMAUG00000016156Ddx110098.182Mesocricetus_auratus
ENSBTAG00000009906DDX110097.297ENSMICG00000001023DDX110097.297Microcebus_murinus
ENSBTAG00000009906DDX110097.162ENSMOCG00000000257Ddx110097.162Microtus_ochrogaster
ENSBTAG00000009906DDX18983.537ENSMMOG00000015397ddx19983.537Mola_mola
ENSBTAG00000009906DDX19995.115ENSMODG00000010275DDX19995.115Monodelphis_domestica
ENSBTAG00000009906DDX110084.865ENSMALG00000016409ddx110084.865Monopterus_albus
ENSBTAG00000009906DDX110097.297MGP_CAROLIEiJ_G0017622Ddx110097.297Mus_caroli
ENSBTAG00000009906DDX110097.162ENSMUSG00000037149Ddx110097.162Mus_musculus
ENSBTAG00000009906DDX110097.568MGP_PahariEiJ_G0029378Ddx110097.568Mus_pahari
ENSBTAG00000009906DDX110097.162MGP_SPRETEiJ_G0018464Ddx110097.162Mus_spretus
ENSBTAG00000009906DDX110098.649ENSMPUG00000013606DDX110098.649Mustela_putorius_furo
ENSBTAG00000009906DDX19997.962ENSMLUG00000003027DDX19997.055Myotis_lucifugus
ENSBTAG00000009906DDX19997.411ENSNGAG00000015783Ddx110097.411Nannospalax_galili
ENSBTAG00000009906DDX17880.450ENSNBRG00000020677ddx19480.450Neolamprologus_brichardi
ENSBTAG00000009906DDX110097.162ENSNLEG00000014417DDX110097.162Nomascus_leucogenys
ENSBTAG00000009906DDX19992.886ENSMEUG00000008254DDX19992.886Notamacropus_eugenii
ENSBTAG00000009906DDX19282.298ENSOPRG00000004290DDX110069.054Ochotona_princeps
ENSBTAG00000009906DDX110097.162ENSODEG00000000569DDX110097.162Octodon_degus
ENSBTAG00000009906DDX110085.830ENSONIG00000000513ddx110085.830Oreochromis_niloticus
ENSBTAG00000009906DDX17592.652ENSOANG00000005450DDX19992.652Ornithorhynchus_anatinus
ENSBTAG00000009906DDX110097.703ENSOCUG00000007010DDX110097.703Oryctolagus_cuniculus
ENSBTAG00000009906DDX110084.865ENSORLG00000016709ddx110084.865Oryzias_latipes
ENSBTAG00000009906DDX19984.605ENSORLG00020003290ddx110084.605Oryzias_latipes_hni
ENSBTAG00000009906DDX110084.459ENSORLG00015022438ddx110084.459Oryzias_latipes_hsok
ENSBTAG00000009906DDX110080.135ENSOMEG00000017620ddx110078.649Oryzias_melastigma
ENSBTAG00000009906DDX19996.875ENSOGAG00000008730DDX110096.875Otolemur_garnettii
ENSBTAG00000009906DDX19998.913ENSOARG00000016369DDX110098.913Ovis_aries
ENSBTAG00000009906DDX110097.162ENSPPAG00000027432DDX110097.162Pan_paniscus
ENSBTAG00000009906DDX110098.378ENSPPRG00000020556DDX110098.378Panthera_pardus
ENSBTAG00000009906DDX110098.243ENSPTIG00000008267DDX110098.243Panthera_tigris_altaica
ENSBTAG00000009906DDX110097.162ENSPTRG00000011670DDX110097.162Pan_troglodytes
ENSBTAG00000009906DDX110097.027ENSPANG00000025185DDX110097.027Papio_anubis
ENSBTAG00000009906DDX110084.054ENSPKIG00000012466ddx110084.196Paramormyrops_kingsleyae
ENSBTAG00000009906DDX15491.315ENSPSIG00000012292DDX110091.315Pelodiscus_sinensis
ENSBTAG00000009906DDX110082.568ENSPMGG00000000782ddx110081.081Periophthalmus_magnuspinnatus
ENSBTAG00000009906DDX110096.892ENSPEMG00000016389Ddx110096.892Peromyscus_maniculatus_bairdii
ENSBTAG00000009906DDX19979.484ENSPMAG00000009118-10079.484Petromyzon_marinus
ENSBTAG00000009906DDX110095.676ENSPCIG00000010941DDX110095.676Phascolarctos_cinereus
ENSBTAG00000009906DDX110084.595ENSPFOG00000011921ddx110084.595Poecilia_formosa
ENSBTAG00000009906DDX18683.048ENSPFOG00000006873-10083.048Poecilia_formosa
ENSBTAG00000009906DDX110084.324ENSPLAG00000005939ddx110084.324Poecilia_latipinna
ENSBTAG00000009906DDX110084.865ENSPMEG00000011140ddx110084.865Poecilia_mexicana
ENSBTAG00000009906DDX110084.459ENSPREG00000011751ddx110084.459Poecilia_reticulata
ENSBTAG00000009906DDX110097.297ENSPPYG00000012638DDX110097.297Pongo_abelii
ENSBTAG00000009906DDX110084.054ENSPCAG00000001491DDX110084.054Procavia_capensis
ENSBTAG00000009906DDX19995.095ENSPCOG00000028185DDX19995.109Propithecus_coquereli
ENSBTAG00000009906DDX110097.838ENSPVAG00000013618DDX110097.838Pteropus_vampyrus
ENSBTAG00000009906DDX110085.000ENSPNYG00000013839ddx110085.000Pundamilia_nyererei
ENSBTAG00000009906DDX18983.359ENSPNAG00000017033ddx19783.359Pygocentrus_nattereri
ENSBTAG00000009906DDX110097.703ENSRNOG00000006652Ddx110097.703Rattus_norvegicus
ENSBTAG00000009906DDX110095.946ENSRBIG00000041664DDX110096.480Rhinopithecus_bieti
ENSBTAG00000009906DDX110096.757ENSRROG00000031167DDX110096.757Rhinopithecus_roxellana
ENSBTAG00000009906DDX110097.432ENSSBOG00000027577DDX110097.432Saimiri_boliviensis_boliviensis
ENSBTAG00000009906DDX19986.974ENSSHAG00000009363DDX19986.974Sarcophilus_harrisii
ENSBTAG00000009906DDX110083.514ENSSFOG00015014476ddx110083.514Scleropages_formosus
ENSBTAG00000009906DDX110083.649ENSSMAG00000010094ddx110083.649Scophthalmus_maximus
ENSBTAG00000009906DDX110085.135ENSSDUG00000012334ddx110085.135Seriola_dumerili
ENSBTAG00000009906DDX110084.730ENSSLDG00000025345ddx110084.730Seriola_lalandi_dorsalis
ENSBTAG00000009906DDX19986.921ENSSARG00000004536DDX110086.921Sorex_araneus
ENSBTAG00000009906DDX110090.946ENSSPUG00000018835DDX110090.946Sphenodon_punctatus
ENSBTAG00000009906DDX110080.405ENSSPAG00000023554ddx110080.405Stegastes_partitus
ENSBTAG00000009906DDX110098.649ENSSSCG00000008619DDX110098.649Sus_scrofa
ENSBTAG00000009906DDX110092.432ENSTGUG00000013096DDX110092.432Taeniopygia_guttata
ENSBTAG00000009906DDX19984.146ENSTRUG00000015765ddx19984.146Takifugu_rubripes
ENSBTAG00000009906DDX110084.865ENSTNIG00000016309ddx110084.865Tetraodon_nigroviridis
ENSBTAG00000009906DDX19993.052ENSTBEG00000008454DDX110093.052Tupaia_belangeri
ENSBTAG00000009906DDX110097.838ENSTTRG00000005081DDX110097.838Tursiops_truncatus
ENSBTAG00000009906DDX17185.822ENSUAMG00000017375DDX19385.660Ursus_americanus
ENSBTAG00000009906DDX19998.501ENSUMAG00000023450DDX110098.501Ursus_maritimus
ENSBTAG00000009906DDX18599.287ENSVPAG00000007764DDX18599.287Vicugna_pacos
ENSBTAG00000009906DDX19998.367ENSVVUG00000013085DDX19698.367Vulpes_vulpes
ENSBTAG00000009906DDX110089.730ENSXETG00000017825ddx110089.730Xenopus_tropicalis
ENSBTAG00000009906DDX110081.794ENSXCOG00000007082ddx110081.794Xiphophorus_couchianus
ENSBTAG00000009906DDX110084.459ENSXMAG00000004555ddx110084.459Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0002735positive regulation of myeloid dendritic cell cytokine production-IEAProcess
GO:0003677DNA binding-IEAFunction
GO:0003682chromatin binding-ISSFunction
GO:0003712transcription coregulator activity-ISSFunction
GO:0003725double-stranded RNA binding-IEAFunction
GO:0004518nuclease activity-ISSFunction
GO:0004527exonuclease activity-IEAFunction
GO:0005524ATP binding-IEAFunction
GO:0005634nucleus-ISSComponent
GO:0005737cytoplasm-ISSComponent
GO:0005739mitochondrion-ISSComponent
GO:0005829cytosol-ISSComponent
GO:0006302double-strand break repair-ISSProcess
GO:0006388tRNA splicing, via endonucleolytic cleavage and ligation-ISSProcess
GO:0006397mRNA processing-IEAProcess
GO:0007275multicellular organism development-IEAProcess
GO:0008026ATP-dependent helicase activity-ISSFunction
GO:0008143poly(A) binding-ISSFunction
GO:0010494cytoplasmic stress granule-ISSComponent
GO:0032508DNA duplex unwinding-ISSProcess
GO:0033677DNA/RNA helicase activity-ISSFunction
GO:0043123positive regulation of I-kappaB kinase/NF-kappaB signaling-ISSProcess
GO:0043330response to exogenous dsRNA-IEAProcess
GO:0045087innate immune response-IEAProcess
GO:0051607defense response to virus-IEAProcess
GO:0071920cleavage body-ISSComponent
GO:0072669tRNA-splicing ligase complex-ISSComponent
GO:0090305nucleic acid phosphodiester bond hydrolysis-IEAProcess
GO:1903506regulation of nucleic acid-templated transcription-IEAProcess
GO:1903608protein localization to cytoplasmic stress granule-IEAProcess

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