EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000010042 (Gene tree)
Gene ID: 522917
Gene Symbol: RIOK3
Alias: -
Full Name: Bos taurus RIO kinase 3 (RIOK3)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 22245 bases
Position: chr24:33143190-33165434
Accession: NM_001075836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000013242	RIO1	PF01163.22	5.6e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000013242	-	4309	-	ENSBTAP00000013242	519 (aa)	-	Q1RMT7

Gene Model

Click here to download ENSBTAG00000010042's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000010042's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000010042	RIOK3	59	43.450	ENSBTAG00000013821	RIOK1	53	43.450

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000010042	RIOK3	100	95.954	ENSG00000101782	RIOK3	100	95.954	Homo_sapiens
ENSBTAG00000010042	RIOK3	96	72.600	ENSAPOG00000020861	riok3	97	72.600	Acanthochromis_polyacanthus
ENSBTAG00000010042	RIOK3	100	96.724	ENSAMEG00000013754	RIOK3	85	96.724	Ailuropoda_melanoleuca
ENSBTAG00000010042	RIOK3	96	74.651	ENSACIG00000019894	riok3	98	74.651	Amphilophus_citrinellus
ENSBTAG00000010042	RIOK3	96	74.600	ENSAOCG00000007172	riok3	99	75.154	Amphiprion_ocellaris
ENSBTAG00000010042	RIOK3	96	74.400	ENSAPEG00000002536	riok3	99	74.333	Amphiprion_percula
ENSBTAG00000010042	RIOK3	97	73.413	ENSATEG00000018303	riok3	99	73.413	Anabas_testudineus
ENSBTAG00000010042	RIOK3	99	86.602	ENSAPLG00000006497	RIOK3	99	86.602	Anas_platyrhynchos
ENSBTAG00000010042	RIOK3	98	83.203	ENSACAG00000000159	RIOK3	98	83.203	Anolis_carolinensis
ENSBTAG00000010042	RIOK3	100	70.992	ENSANAG00000030146	RIOK3	100	70.992	Aotus_nancymaae
ENSBTAG00000010042	RIOK3	93	75.103	ENSACLG00000018966	riok3	98	75.103	Astatotilapia_calliptera
ENSBTAG00000010042	RIOK3	97	73.518	ENSAMXG00000015617	riok3	99	72.605	Astyanax_mexicanus
ENSBTAG00000010042	RIOK3	93	35.743	WBGene00014012	riok-3	91	35.743	Caenorhabditis_elegans
ENSBTAG00000010042	RIOK3	100	96.532	ENSCJAG00000020556	RIOK3	100	96.532	Callithrix_jacchus
ENSBTAG00000010042	RIOK3	100	97.303	ENSCAFG00000018201	RIOK3	100	97.303	Canis_familiaris
ENSBTAG00000010042	RIOK3	99	97.471	ENSCAFG00020014801	RIOK3	99	97.810	Canis_lupus_dingo
ENSBTAG00000010042	RIOK3	100	98.459	ENSCHIG00000009312	RIOK3	100	98.459	Capra_hircus
ENSBTAG00000010042	RIOK3	100	96.532	ENSTSYG00000000142	RIOK3	100	96.532	Carlito_syrichta
ENSBTAG00000010042	RIOK3	89	96.304	ENSCAPG00000005756	RIOK3	95	96.304	Cavia_aperea
ENSBTAG00000010042	RIOK3	100	95.183	ENSCPOG00000007991	RIOK3	100	95.183	Cavia_porcellus
ENSBTAG00000010042	RIOK3	100	96.339	ENSCCAG00000028338	RIOK3	98	96.047	Cebus_capucinus
ENSBTAG00000010042	RIOK3	100	95.568	ENSCATG00000040824	RIOK3	100	95.568	Cercocebus_atys
ENSBTAG00000010042	RIOK3	99	95.914	ENSCLAG00000006767	RIOK3	99	95.914	Chinchilla_lanigera
ENSBTAG00000010042	RIOK3	100	95.954	ENSCSAG00000017680	RIOK3	100	95.954	Chlorocebus_sabaeus
ENSBTAG00000010042	RIOK3	87	96.310	ENSCHOG00000008343	RIOK3	87	96.310	Choloepus_hoffmanni
ENSBTAG00000010042	RIOK3	100	86.590	ENSCPBG00000027226	RIOK3	100	86.590	Chrysemys_picta_bellii
ENSBTAG00000010042	RIOK3	97	49.906	ENSCSAVG00000003068	-	100	52.254	Ciona_savignyi
ENSBTAG00000010042	RIOK3	95	80.808	ENSCANG00000035939	RIOK3	95	96.739	Colobus_angolensis_palliatus
ENSBTAG00000010042	RIOK3	100	94.412	ENSCGRG00001013249	Riok3	100	94.412	Cricetulus_griseus_chok1gshd
ENSBTAG00000010042	RIOK3	100	94.027	ENSCGRG00000017636	Riok3	100	94.027	Cricetulus_griseus_crigri
ENSBTAG00000010042	RIOK3	95	72.345	ENSCSEG00000018289	riok3	99	72.614	Cynoglossus_semilaevis
ENSBTAG00000010042	RIOK3	95	72.745	ENSCVAG00000011848	riok3	97	72.745	Cyprinodon_variegatus
ENSBTAG00000010042	RIOK3	96	73.611	ENSDARG00000042751	riok3	97	73.611	Danio_rerio
ENSBTAG00000010042	RIOK3	100	96.146	ENSDNOG00000039433	RIOK3	100	96.146	Dasypus_novemcinctus
ENSBTAG00000010042	RIOK3	100	95.761	ENSDORG00000011663	Riok3	100	95.761	Dipodomys_ordii
ENSBTAG00000010042	RIOK3	87	42.383	FBgn0031643	CG3008	84	43.164	Drosophila_melanogaster
ENSBTAG00000010042	RIOK3	93	94.008	ENSETEG00000003689	RIOK3	100	94.008	Echinops_telfairi
ENSBTAG00000010042	RIOK3	94	53.768	ENSEBUG00000000555	riok3	96	53.768	Eptatretus_burgeri
ENSBTAG00000010042	RIOK3	100	94.990	ENSEASG00005002317	RIOK3	100	94.990	Equus_asinus_asinus
ENSBTAG00000010042	RIOK3	100	95.183	ENSECAG00000009028	RIOK3	100	95.183	Equus_caballus
ENSBTAG00000010042	RIOK3	96	77.309	ENSEEUG00000007005	RIOK3	100	77.309	Erinaceus_europaeus
ENSBTAG00000010042	RIOK3	97	74.606	ENSELUG00000017655	riok3	99	74.606	Esox_lucius
ENSBTAG00000010042	RIOK3	100	97.495	ENSFCAG00000000517	RIOK3	100	97.495	Felis_catus
ENSBTAG00000010042	RIOK3	96	87.052	ENSFALG00000006145	RIOK3	99	85.714	Ficedula_albicollis
ENSBTAG00000010042	RIOK3	100	93.449	ENSFDAG00000001548	RIOK3	100	93.449	Fukomys_damarensis
ENSBTAG00000010042	RIOK3	93	74.691	ENSFHEG00000011350	riok3	97	73.600	Fundulus_heteroclitus
ENSBTAG00000010042	RIOK3	88	72.017	ENSGMOG00000005157	riok3	98	72.017	Gadus_morhua
ENSBTAG00000010042	RIOK3	96	86.853	ENSGALG00000015004	RIOK3	99	85.714	Gallus_gallus
ENSBTAG00000010042	RIOK3	89	64.163	ENSGAFG00000002403	riok3	88	64.163	Gambusia_affinis
ENSBTAG00000010042	RIOK3	96	72.079	ENSGACG00000000880	riok3	97	72.079	Gasterosteus_aculeatus
ENSBTAG00000010042	RIOK3	100	85.057	ENSGAGG00000024785	RIOK3	100	85.057	Gopherus_agassizii
ENSBTAG00000010042	RIOK3	56	95.890	ENSGGOG00000036734	-	94	95.890	Gorilla_gorilla
ENSBTAG00000010042	RIOK3	95	73.695	ENSHBUG00000003233	riok3	97	73.695	Haplochromis_burtoni
ENSBTAG00000010042	RIOK3	100	94.412	ENSHGLG00000003885	RIOK3	100	94.412	Heterocephalus_glaber_female
ENSBTAG00000010042	RIOK3	100	94.412	ENSHGLG00100002077	RIOK3	100	94.412	Heterocephalus_glaber_male
ENSBTAG00000010042	RIOK3	96	72.353	ENSHCOG00000006794	riok3	97	72.353	Hippocampus_comes
ENSBTAG00000010042	RIOK3	96	73.239	ENSIPUG00000001406	Riok3	97	73.239	Ictalurus_punctatus
ENSBTAG00000010042	RIOK3	100	96.146	ENSSTOG00000006517	RIOK3	100	96.146	Ictidomys_tridecemlineatus
ENSBTAG00000010042	RIOK3	100	94.656	ENSJJAG00000023689	Riok3	100	94.656	Jaculus_jaculus
ENSBTAG00000010042	RIOK3	97	72.421	ENSKMAG00000007259	riok3	97	72.421	Kryptolebias_marmoratus
ENSBTAG00000010042	RIOK3	97	72.134	ENSLBEG00000013689	riok3	98	72.134	Labrus_bergylta
ENSBTAG00000010042	RIOK3	99	74.806	ENSLACG00000017326	RIOK3	99	74.806	Latimeria_chalumnae
ENSBTAG00000010042	RIOK3	100	77.115	ENSLOCG00000001652	riok3	100	77.115	Lepisosteus_oculatus
ENSBTAG00000010042	RIOK3	100	93.846	ENSLAFG00000001380	RIOK3	100	93.846	Loxodonta_africana
ENSBTAG00000010042	RIOK3	100	95.761	ENSMMUG00000021478	RIOK3	100	95.761	Macaca_mulatta
ENSBTAG00000010042	RIOK3	100	84.393	ENSMNEG00000041106	RIOK3	100	84.393	Macaca_nemestrina
ENSBTAG00000010042	RIOK3	100	95.954	ENSMLEG00000028187	RIOK3	100	95.954	Mandrillus_leucophaeus
ENSBTAG00000010042	RIOK3	95	73.239	ENSMAMG00000008502	riok3	97	73.146	Mastacembelus_armatus
ENSBTAG00000010042	RIOK3	95	73.695	ENSMZEG00005020212	riok3	97	73.695	Maylandia_zebra
ENSBTAG00000010042	RIOK3	100	84.291	ENSMGAG00000010079	RIOK3	100	84.291	Meleagris_gallopavo
ENSBTAG00000010042	RIOK3	99	95.358	ENSMAUG00000020527	Riok3	99	95.358	Mesocricetus_auratus
ENSBTAG00000010042	RIOK3	100	96.917	ENSMICG00000009293	RIOK3	99	96.893	Microcebus_murinus
ENSBTAG00000010042	RIOK3	99	93.969	ENSMOCG00000012114	Riok3	96	93.969	Microtus_ochrogaster
ENSBTAG00000010042	RIOK3	93	71.663	ENSMMOG00000019204	riok3	98	71.663	Mola_mola
ENSBTAG00000010042	RIOK3	100	91.923	ENSMODG00000021496	RIOK3	100	91.923	Monodelphis_domestica
ENSBTAG00000010042	RIOK3	96	73.108	ENSMALG00000020848	riok3	97	73.108	Monopterus_albus
ENSBTAG00000010042	RIOK3	99	94.961	MGP_CAROLIEiJ_G0022001	Riok3	99	94.961	Mus_caroli
ENSBTAG00000010042	RIOK3	99	95.543	ENSMUSG00000024404	Riok3	98	100.000	Mus_musculus
ENSBTAG00000010042	RIOK3	99	95.736	MGP_PahariEiJ_G0018739	Riok3	99	95.736	Mus_pahari
ENSBTAG00000010042	RIOK3	100	97.110	ENSMPUG00000005772	RIOK3	100	97.110	Mustela_putorius_furo
ENSBTAG00000010042	RIOK3	99	94.595	ENSMLUG00000007081	RIOK3	99	94.595	Myotis_lucifugus
ENSBTAG00000010042	RIOK3	99	95.146	ENSNGAG00000011446	Riok3	99	95.146	Nannospalax_galili
ENSBTAG00000010042	RIOK3	75	73.118	ENSNBRG00000016677	riok3	83	73.118	Neolamprologus_brichardi
ENSBTAG00000010042	RIOK3	100	96.339	ENSNLEG00000006758	RIOK3	100	96.339	Nomascus_leucogenys
ENSBTAG00000010042	RIOK3	100	91.538	ENSMEUG00000006292	RIOK3	100	91.538	Notamacropus_eugenii
ENSBTAG00000010042	RIOK3	100	94.605	ENSOPRG00000004803	RIOK3	100	94.605	Ochotona_princeps
ENSBTAG00000010042	RIOK3	100	94.027	ENSODEG00000006444	RIOK3	100	94.027	Octodon_degus
ENSBTAG00000010042	RIOK3	95	73.253	ENSONIG00000013422	riok3	99	73.253	Oreochromis_niloticus
ENSBTAG00000010042	RIOK3	94	89.796	ENSOANG00000012074	RIOK3	100	89.796	Ornithorhynchus_anatinus
ENSBTAG00000010042	RIOK3	100	95.568	ENSOCUG00000016820	RIOK3	100	95.568	Oryctolagus_cuniculus
ENSBTAG00000010042	RIOK3	97	72.530	ENSORLG00000003395	riok3	99	72.530	Oryzias_latipes
ENSBTAG00000010042	RIOK3	97	72.727	ENSORLG00020000672	riok3	99	72.727	Oryzias_latipes_hni
ENSBTAG00000010042	RIOK3	97	72.530	ENSORLG00015007372	riok3	99	72.530	Oryzias_latipes_hsok
ENSBTAG00000010042	RIOK3	97	72.763	ENSOMEG00000001380	riok3	98	72.763	Oryzias_melastigma
ENSBTAG00000010042	RIOK3	100	96.724	ENSOGAG00000014502	RIOK3	90	96.724	Otolemur_garnettii
ENSBTAG00000010042	RIOK3	100	98.651	ENSOARG00000008042	RIOK3	100	98.651	Ovis_aries
ENSBTAG00000010042	RIOK3	100	96.146	ENSPPAG00000030258	RIOK3	100	96.146	Pan_paniscus
ENSBTAG00000010042	RIOK3	100	97.495	ENSPPRG00000023302	RIOK3	100	97.495	Panthera_pardus
ENSBTAG00000010042	RIOK3	100	97.688	ENSPTIG00000000960	RIOK3	100	97.688	Panthera_tigris_altaica
ENSBTAG00000010042	RIOK3	100	95.954	ENSPTRG00000009918	RIOK3	100	95.954	Pan_troglodytes
ENSBTAG00000010042	RIOK3	100	95.954	ENSPANG00000011485	RIOK3	100	95.954	Papio_anubis
ENSBTAG00000010042	RIOK3	96	77.800	ENSPKIG00000018297	riok3	97	77.800	Paramormyrops_kingsleyae
ENSBTAG00000010042	RIOK3	100	84.645	ENSPSIG00000006250	RIOK3	100	84.645	Pelodiscus_sinensis
ENSBTAG00000010042	RIOK3	92	72.500	ENSPMGG00000009414	riok3	99	72.500	Periophthalmus_magnuspinnatus
ENSBTAG00000010042	RIOK3	100	94.220	ENSPEMG00000023794	Riok3	100	94.220	Peromyscus_maniculatus_bairdii
ENSBTAG00000010042	RIOK3	83	71.824	ENSPMAG00000003258	riok3	97	71.824	Petromyzon_marinus
ENSBTAG00000010042	RIOK3	93	92.531	ENSPCIG00000013991	RIOK3	100	92.531	Phascolarctos_cinereus
ENSBTAG00000010042	RIOK3	93	73.663	ENSPFOG00000024127	riok3	97	72.691	Poecilia_formosa
ENSBTAG00000010042	RIOK3	93	73.868	ENSPLAG00000004956	riok3	97	72.892	Poecilia_latipinna
ENSBTAG00000010042	RIOK3	93	74.127	ENSPMEG00000020108	riok3	97	73.146	Poecilia_mexicana
ENSBTAG00000010042	RIOK3	96	71.881	ENSPREG00000010010	riok3	98	71.881	Poecilia_reticulata
ENSBTAG00000010042	RIOK3	100	89.788	ENSPPYG00000009062	RIOK3	100	89.788	Pongo_abelii
ENSBTAG00000010042	RIOK3	77	91.882	ENSPCAG00000001021	RIOK3	76	91.882	Procavia_capensis
ENSBTAG00000010042	RIOK3	100	97.110	ENSPCOG00000022631	RIOK3	100	97.110	Propithecus_coquereli
ENSBTAG00000010042	RIOK3	100	82.081	ENSPVAG00000015817	RIOK3	100	82.081	Pteropus_vampyrus
ENSBTAG00000010042	RIOK3	95	73.695	ENSPNYG00000003271	riok3	97	73.695	Pundamilia_nyererei
ENSBTAG00000010042	RIOK3	96	74.704	ENSPNAG00000006213	riok3	97	74.704	Pygocentrus_nattereri
ENSBTAG00000010042	RIOK3	100	94.798	ENSRNOG00000023376	Riok3	100	94.798	Rattus_norvegicus
ENSBTAG00000010042	RIOK3	100	95.761	ENSRBIG00000035071	RIOK3	100	95.761	Rhinopithecus_bieti
ENSBTAG00000010042	RIOK3	100	95.568	ENSRROG00000045710	RIOK3	100	95.568	Rhinopithecus_roxellana
ENSBTAG00000010042	RIOK3	100	96.532	ENSSBOG00000034387	RIOK3	100	96.532	Saimiri_boliviensis_boliviensis
ENSBTAG00000010042	RIOK3	100	92.308	ENSSHAG00000011854	RIOK3	100	92.308	Sarcophilus_harrisii
ENSBTAG00000010042	RIOK3	100	73.473	ENSSFOG00015012912	riok3	98	75.904	Scleropages_formosus
ENSBTAG00000010042	RIOK3	99	71.511	ENSSMAG00000011527	riok3	99	71.511	Scophthalmus_maximus
ENSBTAG00000010042	RIOK3	95	74.800	ENSSDUG00000016018	riok3	97	74.800	Seriola_dumerili
ENSBTAG00000010042	RIOK3	58	81.098	ENSSLDG00000022246	riok3	93	76.667	Seriola_lalandi_dorsalis
ENSBTAG00000010042	RIOK3	87	96.679	ENSSARG00000010154	RIOK3	87	96.679	Sorex_araneus
ENSBTAG00000010042	RIOK3	98	86.550	ENSSPUG00000015246	RIOK3	98	86.550	Sphenodon_punctatus
ENSBTAG00000010042	RIOK3	99	71.923	ENSSPAG00000000601	riok3	99	71.923	Stegastes_partitus
ENSBTAG00000010042	RIOK3	100	97.688	ENSSSCG00000029518	RIOK3	100	97.810	Sus_scrofa
ENSBTAG00000010042	RIOK3	96	86.853	ENSTGUG00000010392	RIOK3	100	85.277	Taeniopygia_guttata
ENSBTAG00000010042	RIOK3	99	70.385	ENSTRUG00000007055	riok3	99	70.385	Takifugu_rubripes
ENSBTAG00000010042	RIOK3	93	67.490	ENSTNIG00000001855	riok3	99	67.490	Tetraodon_nigroviridis
ENSBTAG00000010042	RIOK3	55	97.222	ENSTBEG00000015851	RIOK3	55	97.222	Tupaia_belangeri
ENSBTAG00000010042	RIOK3	100	96.146	ENSTTRG00000008839	RIOK3	100	96.146	Tursiops_truncatus
ENSBTAG00000010042	RIOK3	100	96.532	ENSUAMG00000018410	RIOK3	100	96.532	Ursus_americanus
ENSBTAG00000010042	RIOK3	100	95.954	ENSUMAG00000020218	RIOK3	97	96.869	Ursus_maritimus
ENSBTAG00000010042	RIOK3	100	97.110	ENSVPAG00000009034	RIOK3	100	97.110	Vicugna_pacos
ENSBTAG00000010042	RIOK3	100	97.303	ENSVVUG00000003651	RIOK3	76	97.303	Vulpes_vulpes
ENSBTAG00000010042	RIOK3	100	75.385	ENSXETG00000027370	riok3	100	75.385	Xenopus_tropicalis
ENSBTAG00000010042	RIOK3	95	71.713	ENSXCOG00000001032	riok3	99	71.713	Xiphophorus_couchianus
ENSBTAG00000010042	RIOK3	95	72.167	ENSXMAG00000012902	riok3	97	72.167	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005524	ATP binding	-	IEA	Function
GO:0006468	protein phosphorylation	-	IEA	Process
GO:0032463	negative regulation of protein homooligomerization	-	IEA	Process
GO:0032728	positive regulation of interferon-beta production	-	IEA	Process
GO:0039534	negative regulation of MDA-5 signaling pathway	-	IEA	Process
GO:0043124	negative regulation of I-kappaB kinase/NF-kappaB signaling	-	IEA	Process
GO:0045087	innate immune response	-	IEA	Process
GO:0045089	positive regulation of innate immune response	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0051607	defense response to virus	-	IEA	Process
GO:0071359	cellular response to dsRNA	-	IEA	Process
GO:0089720	caspase binding	-	IEA	Function
GO:0098586	cellular response to virus	-	IEA	Process
GO:1990786	cellular response to dsDNA	-	IEA	Process