EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000010518 (Gene tree)
Gene ID: 520256
Gene Symbol: MTREX
Alias: SKIV2L2
Full Name: Bos taurus Mtr4 exosome RNA helicase (MTREX)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 91389 bases
Position: chr20:23738862-23830250
Accession: NM_001099012
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000044575	rRNA_proc-arch	PF13234.6	5e-87	1	1
ENSBTAP00000044575	DEAD	PF00270.29	5.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000047363	-	3542	-	ENSBTAP00000044575	1040 (aa)	-	A6H714

Gene Model

Click here to download ENSBTAG00000010518's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000010518's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000010518	MTREX	88	37.267	ENSBTAG00000005587	SKIV2L	76	37.267

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000010518	MTREX	100	98.464	ENSG00000039123	MTREX	100	98.464	Homo_sapiens
ENSBTAG00000010518	MTREX	100	83.238	ENSAPOG00000007814	mtrex	100	83.461	Acanthochromis_polyacanthus
ENSBTAG00000010518	MTREX	100	98.562	ENSAMEG00000013856	MTREX	100	98.562	Ailuropoda_melanoleuca
ENSBTAG00000010518	MTREX	100	82.184	ENSACIG00000015117	mtrex	100	82.184	Amphilophus_citrinellus
ENSBTAG00000010518	MTREX	100	83.302	ENSAOCG00000011884	mtrex	100	83.461	Amphiprion_ocellaris
ENSBTAG00000010518	MTREX	100	83.206	ENSAPEG00000019384	mtrex	100	83.365	Amphiprion_percula
ENSBTAG00000010518	MTREX	100	83.985	ENSATEG00000015117	mtrex	100	84.050	Anabas_testudineus
ENSBTAG00000010518	MTREX	95	92.821	ENSAPLG00000009694	MTREX	99	92.821	Anas_platyrhynchos
ENSBTAG00000010518	MTREX	100	91.058	ENSACAG00000015200	MTREX	96	91.058	Anolis_carolinensis
ENSBTAG00000010518	MTREX	100	98.464	ENSANAG00000023095	MTREX	100	98.464	Aotus_nancymaae
ENSBTAG00000010518	MTREX	100	82.555	ENSACLG00000001921	mtrex	100	82.650	Astatotilapia_calliptera
ENSBTAG00000010518	MTREX	97	81.890	ENSAMXG00000018751	mtrex	99	84.205	Astyanax_mexicanus
ENSBTAG00000010518	MTREX	91	53.733	WBGene00012342	mtr-4	98	51.929	Caenorhabditis_elegans
ENSBTAG00000010518	MTREX	100	97.424	ENSCJAG00000001773	MTREX	100	97.424	Callithrix_jacchus
ENSBTAG00000010518	MTREX	100	98.656	ENSCAFG00000006818	MTREX	100	98.656	Canis_familiaris
ENSBTAG00000010518	MTREX	100	98.656	ENSCAFG00020024352	MTREX	100	98.656	Canis_lupus_dingo
ENSBTAG00000010518	MTREX	100	99.424	ENSCHIG00000024413	MTREX	100	99.424	Capra_hircus
ENSBTAG00000010518	MTREX	94	98.205	ENSTSYG00000007389	MTREX	100	98.205	Carlito_syrichta
ENSBTAG00000010518	MTREX	96	73.769	ENSCAPG00000008696	MTREX	99	73.769	Cavia_aperea
ENSBTAG00000010518	MTREX	100	97.985	ENSCPOG00000009797	MTREX	100	97.985	Cavia_porcellus
ENSBTAG00000010518	MTREX	100	98.369	ENSCCAG00000014177	MTREX	100	98.369	Cebus_capucinus
ENSBTAG00000010518	MTREX	100	98.273	ENSCATG00000042153	MTREX	100	98.273	Cercocebus_atys
ENSBTAG00000010518	MTREX	100	97.601	ENSCLAG00000006622	MTREX	100	97.601	Chinchilla_lanigera
ENSBTAG00000010518	MTREX	100	93.493	ENSCSAG00000016445	MTREX	100	93.589	Chlorocebus_sabaeus
ENSBTAG00000010518	MTREX	70	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSBTAG00000010518	MTREX	100	91.835	ENSCPBG00000026551	MTREX	94	92.603	Chrysemys_picta_bellii
ENSBTAG00000010518	MTREX	99	66.571	ENSCING00000003239	-	99	66.571	Ciona_intestinalis
ENSBTAG00000010518	MTREX	99	65.583	ENSCSAVG00000009304	-	100	70.108	Ciona_savignyi
ENSBTAG00000010518	MTREX	100	98.177	ENSCANG00000035770	MTREX	100	98.177	Colobus_angolensis_palliatus
ENSBTAG00000010518	MTREX	100	97.310	ENSCGRG00001024680	Mtrex	100	97.310	Cricetulus_griseus_chok1gshd
ENSBTAG00000010518	MTREX	100	97.310	ENSCGRG00000000307	Mtrex	100	97.310	Cricetulus_griseus_crigri
ENSBTAG00000010518	MTREX	100	82.105	ENSCSEG00000018621	mtrex	98	82.105	Cynoglossus_semilaevis
ENSBTAG00000010518	MTREX	100	83.779	ENSCVAG00000004556	mtrex	100	83.874	Cyprinodon_variegatus
ENSBTAG00000010518	MTREX	100	85.100	ENSDARG00000013457	mtrex	100	84.909	Danio_rerio
ENSBTAG00000010518	MTREX	100	96.654	ENSDNOG00000015375	MTREX	100	96.654	Dasypus_novemcinctus
ENSBTAG00000010518	MTREX	100	97.601	ENSDORG00000006782	Mtrex	100	97.601	Dipodomys_ordii
ENSBTAG00000010518	MTREX	99	62.595	FBgn0001986	Mtr4	93	65.361	Drosophila_melanogaster
ENSBTAG00000010518	MTREX	90	80.828	ENSETEG00000000727	MTREX	90	80.828	Echinops_telfairi
ENSBTAG00000010518	MTREX	99	74.591	ENSEBUG00000012869	mtrex	99	74.280	Eptatretus_burgeri
ENSBTAG00000010518	MTREX	100	98.177	ENSEASG00005013270	MTREX	100	98.177	Equus_asinus_asinus
ENSBTAG00000010518	MTREX	100	98.273	ENSECAG00000023723	MTREX	100	99.537	Equus_caballus
ENSBTAG00000010518	MTREX	98	88.683	ENSEEUG00000000527	MTREX	100	88.683	Erinaceus_europaeus
ENSBTAG00000010518	MTREX	98	84.690	ENSELUG00000004898	mtrex	100	89.496	Esox_lucius
ENSBTAG00000010518	MTREX	100	98.560	ENSFCAG00000010575	MTREX	100	98.560	Felis_catus
ENSBTAG00000010518	MTREX	100	89.904	ENSFALG00000010850	MTREX	100	89.904	Ficedula_albicollis
ENSBTAG00000010518	MTREX	100	97.404	ENSFDAG00000011199	MTREX	100	97.404	Fukomys_damarensis
ENSBTAG00000010518	MTREX	100	83.603	ENSFHEG00000023014	mtrex	100	82.824	Fundulus_heteroclitus
ENSBTAG00000010518	MTREX	100	79.732	ENSGMOG00000014702	mtrex	100	80.115	Gadus_morhua
ENSBTAG00000010518	MTREX	100	91.179	ENSGALG00000014709	MTREX	86	91.154	Gallus_gallus
ENSBTAG00000010518	MTREX	100	83.889	ENSGAFG00000012425	mtrex	100	84.130	Gambusia_affinis
ENSBTAG00000010518	MTREX	100	79.409	ENSGACG00000016260	mtrex	96	85.217	Gasterosteus_aculeatus
ENSBTAG00000010518	MTREX	100	91.931	ENSGAGG00000020036	MTREX	100	91.931	Gopherus_agassizii
ENSBTAG00000010518	MTREX	100	98.560	ENSGGOG00000001867	MTREX	100	98.560	Gorilla_gorilla
ENSBTAG00000010518	MTREX	100	82.555	ENSHBUG00000006229	mtrex	100	82.650	Haplochromis_burtoni
ENSBTAG00000010518	MTREX	100	97.981	ENSHGLG00000019445	SKIV2L2	100	97.981	Heterocephalus_glaber_female
ENSBTAG00000010518	MTREX	100	97.981	ENSHGLG00100011833	SKIV2L2	100	97.981	Heterocephalus_glaber_male
ENSBTAG00000010518	MTREX	91	84.725	ENSHCOG00000019995	mtrex	100	84.725	Hippocampus_comes
ENSBTAG00000010518	MTREX	100	85.345	ENSIPUG00000024348	skiv2l2	100	85.345	Ictalurus_punctatus
ENSBTAG00000010518	MTREX	100	98.081	ENSSTOG00000010802	MTREX	100	98.081	Ictidomys_tridecemlineatus
ENSBTAG00000010518	MTREX	100	91.154	ENSJJAG00000020975	Mtrex	100	91.154	Jaculus_jaculus
ENSBTAG00000010518	MTREX	100	83.048	ENSKMAG00000012642	mtrex	100	83.062	Kryptolebias_marmoratus
ENSBTAG00000010518	MTREX	100	83.843	ENSLBEG00000019367	mtrex	99	86.236	Labrus_bergylta
ENSBTAG00000010518	MTREX	100	88.473	ENSLACG00000009075	MTREX	100	88.230	Latimeria_chalumnae
ENSBTAG00000010518	MTREX	100	87.140	ENSLOCG00000010186	mtrex	100	86.756	Lepisosteus_oculatus
ENSBTAG00000010518	MTREX	99	95.681	ENSLAFG00000010497	MTREX	100	95.681	Loxodonta_africana
ENSBTAG00000010518	MTREX	100	98.273	ENSMFAG00000031610	MTREX	100	98.273	Macaca_fascicularis
ENSBTAG00000010518	MTREX	100	96.839	ENSMMUG00000010379	MTREX	100	96.839	Macaca_mulatta
ENSBTAG00000010518	MTREX	100	98.273	ENSMNEG00000032746	MTREX	100	98.273	Macaca_nemestrina
ENSBTAG00000010518	MTREX	100	98.273	ENSMLEG00000041051	MTREX	100	98.273	Mandrillus_leucophaeus
ENSBTAG00000010518	MTREX	100	82.967	ENSMAMG00000016753	mtrex	98	86.172	Mastacembelus_armatus
ENSBTAG00000010518	MTREX	100	82.555	ENSMZEG00005000414	mtrex	100	82.650	Maylandia_zebra
ENSBTAG00000010518	MTREX	95	67.442	ENSMGAG00000003980	MTREX	100	67.442	Meleagris_gallopavo
ENSBTAG00000010518	MTREX	100	97.313	ENSMAUG00000010727	Mtrex	100	97.313	Mesocricetus_auratus
ENSBTAG00000010518	MTREX	100	98.752	ENSMICG00000012779	MTREX	100	98.752	Microcebus_murinus
ENSBTAG00000010518	MTREX	100	97.313	ENSMOCG00000019886	Mtrex	100	97.313	Microtus_ochrogaster
ENSBTAG00000010518	MTREX	100	81.740	ENSMMOG00000002476	mtrex	100	81.740	Mola_mola
ENSBTAG00000010518	MTREX	100	93.654	ENSMODG00000019494	MTREX	100	93.846	Monodelphis_domestica
ENSBTAG00000010518	MTREX	92	82.600	ENSMALG00000002917	mtrex	99	82.600	Monopterus_albus
ENSBTAG00000010518	MTREX	100	97.115	MGP_CAROLIEiJ_G0018896	Mtrex	100	97.115	Mus_caroli
ENSBTAG00000010518	MTREX	100	97.308	ENSMUSG00000016018	Mtrex	100	97.308	Mus_musculus
ENSBTAG00000010518	MTREX	100	97.212	MGP_PahariEiJ_G0015967	Mtrex	100	97.212	Mus_pahari
ENSBTAG00000010518	MTREX	100	97.308	MGP_SPRETEiJ_G0019775	Mtrex	100	97.308	Mus_spretus
ENSBTAG00000010518	MTREX	100	98.848	ENSMPUG00000007619	MTREX	100	98.848	Mustela_putorius_furo
ENSBTAG00000010518	MTREX	100	97.315	ENSMLUG00000001152	MTREX	100	97.315	Myotis_lucifugus
ENSBTAG00000010518	MTREX	100	97.889	ENSNGAG00000011938	Mtrex	100	97.889	Nannospalax_galili
ENSBTAG00000010518	MTREX	100	82.650	ENSNBRG00000011293	mtrex	100	82.745	Neolamprologus_brichardi
ENSBTAG00000010518	MTREX	100	94.157	ENSNLEG00000001494	MTREX	100	94.253	Nomascus_leucogenys
ENSBTAG00000010518	MTREX	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSBTAG00000010518	MTREX	100	82.981	ENSOPRG00000008009	MTREX	100	82.981	Ochotona_princeps
ENSBTAG00000010518	MTREX	100	97.121	ENSODEG00000017234	MTREX	100	97.121	Octodon_degus
ENSBTAG00000010518	MTREX	100	82.459	ENSONIG00000007587	mtrex	100	82.555	Oreochromis_niloticus
ENSBTAG00000010518	MTREX	100	98.654	ENSOCUG00000004463	MTREX	100	98.654	Oryctolagus_cuniculus
ENSBTAG00000010518	MTREX	100	82.650	ENSORLG00000005443	mtrex	100	82.650	Oryzias_latipes
ENSBTAG00000010518	MTREX	100	82.555	ENSORLG00020006329	mtrex	100	82.555	Oryzias_latipes_hni
ENSBTAG00000010518	MTREX	100	82.555	ENSORLG00015012924	mtrex	100	82.555	Oryzias_latipes_hsok
ENSBTAG00000010518	MTREX	100	81.844	ENSOMEG00000008825	mtrex	100	82.061	Oryzias_melastigma
ENSBTAG00000010518	MTREX	100	98.273	ENSOGAG00000002886	MTREX	100	98.273	Otolemur_garnettii
ENSBTAG00000010518	MTREX	100	99.139	ENSOARG00000007764	MTREX	100	99.139	Ovis_aries
ENSBTAG00000010518	MTREX	100	98.560	ENSPPAG00000039291	MTREX	100	98.560	Pan_paniscus
ENSBTAG00000010518	MTREX	100	98.560	ENSPPRG00000019701	MTREX	100	98.560	Panthera_pardus
ENSBTAG00000010518	MTREX	100	97.025	ENSPTIG00000009313	MTREX	100	97.025	Panthera_tigris_altaica
ENSBTAG00000010518	MTREX	100	98.560	ENSPTRG00000016878	MTREX	100	98.560	Pan_troglodytes
ENSBTAG00000010518	MTREX	100	98.177	ENSPANG00000009697	MTREX	100	98.177	Papio_anubis
ENSBTAG00000010518	MTREX	100	86.699	ENSPKIG00000020833	mtrex	99	87.792	Paramormyrops_kingsleyae
ENSBTAG00000010518	MTREX	100	91.739	ENSPSIG00000012150	MTREX	100	92.315	Pelodiscus_sinensis
ENSBTAG00000010518	MTREX	100	81.375	ENSPMGG00000002582	mtrex	100	81.375	Periophthalmus_magnuspinnatus
ENSBTAG00000010518	MTREX	95	65.331	ENSPMAG00000009668	mtrex	100	65.427	Petromyzon_marinus
ENSBTAG00000010518	MTREX	91	96.621	ENSPCIG00000024730	MTREX	100	96.621	Phascolarctos_cinereus
ENSBTAG00000010518	MTREX	75	87.199	ENSPFOG00000003141	mtrex	100	87.437	Poecilia_formosa
ENSBTAG00000010518	MTREX	100	83.794	ENSPLAG00000021311	mtrex	100	84.115	Poecilia_latipinna
ENSBTAG00000010518	MTREX	92	87.513	ENSPMEG00000010597	mtrex	99	87.828	Poecilia_mexicana
ENSBTAG00000010518	MTREX	100	83.317	ENSPREG00000003089	mtrex	100	83.828	Poecilia_reticulata
ENSBTAG00000010518	MTREX	98	98.537	ENSPPYG00000015469	MTREX	98	98.537	Pongo_abelii
ENSBTAG00000010518	MTREX	94	83.256	ENSPCAG00000013120	MTREX	94	83.256	Procavia_capensis
ENSBTAG00000010518	MTREX	99	93.045	ENSPCOG00000018092	MTREX	100	93.045	Propithecus_coquereli
ENSBTAG00000010518	MTREX	100	98.656	ENSPVAG00000002445	MTREX	100	98.656	Pteropus_vampyrus
ENSBTAG00000010518	MTREX	100	82.459	ENSPNYG00000006164	mtrex	100	82.555	Pundamilia_nyererei
ENSBTAG00000010518	MTREX	100	86.029	ENSPNAG00000008794	mtrex	100	86.124	Pygocentrus_nattereri
ENSBTAG00000010518	MTREX	99	96.696	ENSRNOG00000010125	Mtrex	97	96.696	Rattus_norvegicus
ENSBTAG00000010518	MTREX	100	96.545	ENSRBIG00000034930	MTREX	100	96.545	Rhinopithecus_bieti
ENSBTAG00000010518	MTREX	100	98.273	ENSRROG00000039895	MTREX	100	98.273	Rhinopithecus_roxellana
ENSBTAG00000010518	MTREX	90	55.346	YJL050W	MTR4	89	55.346	Saccharomyces_cerevisiae
ENSBTAG00000010518	MTREX	100	98.273	ENSSBOG00000026693	MTREX	100	98.273	Saimiri_boliviensis_boliviensis
ENSBTAG00000010518	MTREX	96	95.573	ENSSHAG00000004600	MTREX	99	95.573	Sarcophilus_harrisii
ENSBTAG00000010518	MTREX	100	87.452	ENSSFOG00015014355	skiv2l2	100	87.452	Scleropages_formosus
ENSBTAG00000010518	MTREX	100	83.048	ENSSMAG00000007572	mtrex	100	83.174	Scophthalmus_maximus
ENSBTAG00000010518	MTREX	100	83.843	ENSSDUG00000023789	mtrex	100	83.843	Seriola_dumerili
ENSBTAG00000010518	MTREX	100	83.652	ENSSLDG00000006301	mtrex	100	83.652	Seriola_lalandi_dorsalis
ENSBTAG00000010518	MTREX	100	94.434	ENSSARG00000008387	MTREX	100	94.434	Sorex_araneus
ENSBTAG00000010518	MTREX	100	79.674	ENSSPUG00000007071	MTREX	100	80.019	Sphenodon_punctatus
ENSBTAG00000010518	MTREX	92	87.303	ENSSPAG00000011319	mtrex	94	87.828	Stegastes_partitus
ENSBTAG00000010518	MTREX	100	98.944	ENSSSCG00000016911	MTREX	100	98.944	Sus_scrofa
ENSBTAG00000010518	MTREX	100	89.625	ENSTGUG00000002480	MTREX	100	89.423	Taeniopygia_guttata
ENSBTAG00000010518	MTREX	100	83.048	ENSTRUG00000014571	mtrex	100	83.078	Takifugu_rubripes
ENSBTAG00000010518	MTREX	100	81.958	ENSTBEG00000007769	MTREX	100	82.054	Tupaia_belangeri
ENSBTAG00000010518	MTREX	100	99.038	ENSTTRG00000008678	MTREX	100	99.038	Tursiops_truncatus
ENSBTAG00000010518	MTREX	100	98.752	ENSUAMG00000023061	MTREX	100	98.752	Ursus_americanus
ENSBTAG00000010518	MTREX	100	97.989	ENSUMAG00000009373	MTREX	99	99.770	Ursus_maritimus
ENSBTAG00000010518	MTREX	100	87.620	ENSVPAG00000011174	MTREX	100	87.620	Vicugna_pacos
ENSBTAG00000010518	MTREX	100	98.752	ENSVVUG00000021337	MTREX	100	98.752	Vulpes_vulpes
ENSBTAG00000010518	MTREX	100	88.602	ENSXETG00000032798	MTREX	100	88.410	Xenopus_tropicalis
ENSBTAG00000010518	MTREX	100	83.413	ENSXMAG00000004799	mtrex	100	83.828	Xiphophorus_maculatus