EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000010672 (Gene tree)
Gene ID: 614302
Gene Symbol: PCCA
Alias: -
Full Name: Bos taurus propionyl-CoA carboxylase subunit alpha (PCCA)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 362051 bases
Position: chr12:76812919-77174969
Accession: NM_001083509
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000062360	RimK	PF08443.11	4.3e-05	1	1
ENSBTAP00000014120	RimK	PF08443.11	4.8e-05	1	1
ENSBTAP00000064289	RimK	PF08443.11	4.8e-05	1	1
ENSBTAP00000070478	RimK	PF08443.11	4.9e-05	1	1
ENSBTAP00000060748	RimK	PF08443.11	5e-05	1	1
ENSBTAP00000067670	RimK	PF08443.11	5.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000086788	-	2223	-	ENSBTAP00000070478	740 (aa)	-	-
ENSBTAT00000086761	-	2302	-	ENSBTAP00000067670	752 (aa)	-	-
ENSBTAT00000073154	-	2095	-	ENSBTAP00000060748	683 (aa)	XP_024855723	UPI000D53975D
ENSBTAT00000081754	-	2159	-	ENSBTAP00000062360	704 (aa)	-	-
ENSBTAT00000014120	-	2510	-	ENSBTAP00000014120	741 (aa)	-	A4FV90
ENSBTAT00000080928	-	2248	-	ENSBTAP00000064289	734 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000010672's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta00280	Valine, leucine and isoleucine degradation	KEGG
bta00630	Glyoxylate and dicarboxylate metabolism	KEGG
bta00640	Propanoate metabolism	KEGG
bta01100	Metabolic pathways	KEGG
bta01200	Carbon metabolism	KEGG

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000010672	PCCA	99	38.196	ENSBTAG00000006548	MCCC1	96	38.338

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000010672	PCCA	100	89.165	ENSG00000175198	PCCA	99	92.722	Homo_sapiens
ENSBTAG00000010672	PCCA	89	74.581	ENSAPOG00000002389	pcca	100	74.581	Acanthochromis_polyacanthus
ENSBTAG00000010672	PCCA	87	91.615	ENSAMEG00000016627	PCCA	99	91.615	Ailuropoda_melanoleuca
ENSBTAG00000010672	PCCA	85	82.353	ENSACIG00000015913	PCCA	98	82.353	Amphilophus_citrinellus
ENSBTAG00000010672	PCCA	96	74.719	ENSAOCG00000005451	pcca	98	74.719	Amphiprion_ocellaris
ENSBTAG00000010672	PCCA	96	74.860	ENSAPEG00000002955	pcca	98	74.860	Amphiprion_percula
ENSBTAG00000010672	PCCA	96	73.840	ENSATEG00000004273	pcca	98	75.947	Anabas_testudineus
ENSBTAG00000010672	PCCA	95	83.499	ENSAPLG00000002609	PCCA	100	83.499	Anas_platyrhynchos
ENSBTAG00000010672	PCCA	100	83.796	ENSANAG00000031162	PCCA	95	89.704	Aotus_nancymaae
ENSBTAG00000010672	PCCA	97	74.583	ENSACLG00000006725	pcca	98	74.583	Astatotilapia_calliptera
ENSBTAG00000010672	PCCA	100	89.035	ENSCJAG00000020998	PCCA	100	89.035	Callithrix_jacchus
ENSBTAG00000010672	PCCA	100	90.823	ENSCAFG00000005838	PCCA	100	90.823	Canis_familiaris
ENSBTAG00000010672	PCCA	100	90.823	ENSCAFG00020022683	PCCA	100	90.823	Canis_lupus_dingo
ENSBTAG00000010672	PCCA	100	96.221	ENSCHIG00000007335	PCCA	100	96.221	Capra_hircus
ENSBTAG00000010672	PCCA	95	92.284	ENSTSYG00000000053	PCCA	95	92.284	Carlito_syrichta
ENSBTAG00000010672	PCCA	100	88.529	ENSCPOG00000011274	PCCA	100	88.529	Cavia_porcellus
ENSBTAG00000010672	PCCA	100	89.165	ENSCCAG00000022253	PCCA	100	89.165	Cebus_capucinus
ENSBTAG00000010672	PCCA	100	89.751	ENSCATG00000034177	PCCA	100	89.751	Cercocebus_atys
ENSBTAG00000010672	PCCA	100	89.609	ENSCLAG00000003205	PCCA	100	89.609	Chinchilla_lanigera
ENSBTAG00000010672	PCCA	100	88.394	ENSCSAG00000017493	PCCA	100	88.394	Chlorocebus_sabaeus
ENSBTAG00000010672	PCCA	85	85.380	ENSCHOG00000000247	PCCA	90	85.380	Choloepus_hoffmanni
ENSBTAG00000010672	PCCA	96	81.575	ENSCPBG00000018046	PCCA	97	82.508	Chrysemys_picta_bellii
ENSBTAG00000010672	PCCA	93	63.242	ENSCING00000008081	-	96	63.242	Ciona_intestinalis
ENSBTAG00000010672	PCCA	94	60.519	ENSCSAVG00000011361	-	100	62.009	Ciona_savignyi
ENSBTAG00000010672	PCCA	100	89.458	ENSCANG00000013062	PCCA	100	89.458	Colobus_angolensis_palliatus
ENSBTAG00000010672	PCCA	100	86.370	ENSCGRG00001015819	Pcca	100	86.370	Cricetulus_griseus_chok1gshd
ENSBTAG00000010672	PCCA	98	87.190	ENSCGRG00000014796	Pcca	100	86.100	Cricetulus_griseus_crigri
ENSBTAG00000010672	PCCA	96	72.011	ENSCSEG00000016645	pcca	98	72.574	Cynoglossus_semilaevis
ENSBTAG00000010672	PCCA	86	75.824	ENSCVAG00000010430	pcca	96	83.108	Cyprinodon_variegatus
ENSBTAG00000010672	PCCA	100	87.045	ENSDNOG00000042384	PCCA	100	88.889	Dasypus_novemcinctus
ENSBTAG00000010672	PCCA	100	74.899	ENSDORG00000012949	Pcca	100	74.899	Dipodomys_ordii
ENSBTAG00000010672	PCCA	100	94.118	ENSEASG00005022166	PCCA	100	90.958	Equus_asinus_asinus
ENSBTAG00000010672	PCCA	98	91.448	ENSECAG00000018952	PCCA	100	90.823	Equus_caballus
ENSBTAG00000010672	PCCA	91	74.740	ENSELUG00000002383	pcca	100	74.740	Esox_lucius
ENSBTAG00000010672	PCCA	100	94.143	ENSFCAG00000012573	PCCA	100	94.143	Felis_catus
ENSBTAG00000010672	PCCA	100	88.124	ENSFDAG00000005817	PCCA	97	88.124	Fukomys_damarensis
ENSBTAG00000010672	PCCA	96	74.579	ENSFHEG00000011811	pcca	98	74.579	Fundulus_heteroclitus
ENSBTAG00000010672	PCCA	96	73.418	ENSGAFG00000011218	pcca	98	73.418	Gambusia_affinis
ENSBTAG00000010672	PCCA	90	75.753	ENSGACG00000002342	pcca	100	75.753	Gasterosteus_aculeatus
ENSBTAG00000010672	PCCA	86	84.103	ENSGAGG00000010472	PCCA	94	84.103	Gopherus_agassizii
ENSBTAG00000010672	PCCA	100	89.458	ENSGGOG00000012516	PCCA	100	89.458	Gorilla_gorilla
ENSBTAG00000010672	PCCA	100	88.394	ENSHGLG00000011057	PCCA	100	88.394	Heterocephalus_glaber_female
ENSBTAG00000010672	PCCA	100	88.394	ENSHGLG00100001468	PCCA	100	88.394	Heterocephalus_glaber_male
ENSBTAG00000010672	PCCA	96	73.588	ENSHCOG00000016098	pcca	100	74.429	Hippocampus_comes
ENSBTAG00000010672	PCCA	95	90.085	ENSSTOG00000021045	PCCA	100	90.085	Ictidomys_tridecemlineatus
ENSBTAG00000010672	PCCA	100	85.965	ENSJJAG00000011150	Pcca	100	85.965	Jaculus_jaculus
ENSBTAG00000010672	PCCA	96	74.576	ENSKMAG00000014632	pcca	99	73.955	Kryptolebias_marmoratus
ENSBTAG00000010672	PCCA	89	81.735	ENSLACG00000012828	PCCA	100	81.735	Latimeria_chalumnae
ENSBTAG00000010672	PCCA	92	89.412	ENSLAFG00000014958	PCCA	100	89.280	Loxodonta_africana
ENSBTAG00000010672	PCCA	100	89.751	ENSMFAG00000020427	PCCA	100	89.751	Macaca_fascicularis
ENSBTAG00000010672	PCCA	100	89.458	ENSMMUG00000004493	PCCA	100	89.458	Macaca_mulatta
ENSBTAG00000010672	PCCA	100	89.605	ENSMNEG00000045261	PCCA	100	89.605	Macaca_nemestrina
ENSBTAG00000010672	PCCA	100	89.898	ENSMLEG00000033842	PCCA	100	89.898	Mandrillus_leucophaeus
ENSBTAG00000010672	PCCA	96	73.596	ENSMAMG00000009304	pcca	98	73.596	Mastacembelus_armatus
ENSBTAG00000010672	PCCA	97	74.583	ENSMZEG00005018487	pcca	98	74.583	Maylandia_zebra
ENSBTAG00000010672	PCCA	61	88.038	ENSMGAG00000014892	PCCA	99	88.038	Meleagris_gallopavo
ENSBTAG00000010672	PCCA	100	80.811	ENSMAUG00000000626	Pcca	94	89.286	Mesocricetus_auratus
ENSBTAG00000010672	PCCA	71	88.296	ENSMICG00000038258	-	96	86.888	Microcebus_murinus
ENSBTAG00000010672	PCCA	100	91.069	ENSMICG00000010685	-	100	91.069	Microcebus_murinus
ENSBTAG00000010672	PCCA	100	86.640	ENSMOCG00000015156	Pcca	100	86.022	Microtus_ochrogaster
ENSBTAG00000010672	PCCA	97	73.361	ENSMALG00000009947	pcca	100	73.848	Monopterus_albus
ENSBTAG00000010672	PCCA	100	86.505	MGP_CAROLIEiJ_G0019618	Pcca	100	86.505	Mus_caroli
ENSBTAG00000010672	PCCA	100	86.370	ENSMUSG00000041650	Pcca	100	86.370	Mus_musculus
ENSBTAG00000010672	PCCA	100	86.370	MGP_PahariEiJ_G0030634	Pcca	100	86.370	Mus_pahari
ENSBTAG00000010672	PCCA	100	86.235	MGP_SPRETEiJ_G0020515	Pcca	100	86.235	Mus_spretus
ENSBTAG00000010672	PCCA	94	93.678	ENSMPUG00000011333	PCCA	100	93.678	Mustela_putorius_furo
ENSBTAG00000010672	PCCA	86	90.956	ENSMLUG00000005729	PCCA	100	90.986	Myotis_lucifugus
ENSBTAG00000010672	PCCA	100	82.638	ENSNGAG00000016528	Pcca	100	82.907	Nannospalax_galili
ENSBTAG00000010672	PCCA	79	67.184	ENSNBRG00000019075	pcca	97	67.184	Neolamprologus_brichardi
ENSBTAG00000010672	PCCA	100	86.220	ENSODEG00000010667	PCCA	100	86.220	Octodon_degus
ENSBTAG00000010672	PCCA	97	74.444	ENSONIG00000013151	pcca	98	74.444	Oreochromis_niloticus
ENSBTAG00000010672	PCCA	93	90.394	ENSOCUG00000017230	PCCA	96	90.382	Oryctolagus_cuniculus
ENSBTAG00000010672	PCCA	98	71.625	ENSORLG00000000361	pcca	99	71.625	Oryzias_latipes
ENSBTAG00000010672	PCCA	98	71.901	ENSORLG00020005749	pcca	99	71.901	Oryzias_latipes_hni
ENSBTAG00000010672	PCCA	98	71.703	ENSORLG00015012738	pcca	99	71.703	Oryzias_latipes_hsok
ENSBTAG00000010672	PCCA	98	72.276	ENSOMEG00000001912	pcca	99	72.276	Oryzias_melastigma
ENSBTAG00000010672	PCCA	100	89.204	ENSOGAG00000017088	PCCA	100	89.204	Otolemur_garnettii
ENSBTAG00000010672	PCCA	89	96.347	ENSOARG00000004442	PCCA	100	96.347	Ovis_aries
ENSBTAG00000010672	PCCA	100	89.458	ENSPPAG00000036841	PCCA	100	89.458	Pan_paniscus
ENSBTAG00000010672	PCCA	100	93.997	ENSPPRG00000006626	PCCA	100	93.997	Panthera_pardus
ENSBTAG00000010672	PCCA	87	93.448	ENSPTIG00000009732	PCCA	100	95.369	Panthera_tigris_altaica
ENSBTAG00000010672	PCCA	100	89.312	ENSPTRG00000006001	PCCA	100	89.312	Pan_troglodytes
ENSBTAG00000010672	PCCA	96	78.254	ENSPKIG00000004765	pcca	98	78.254	Paramormyrops_kingsleyae
ENSBTAG00000010672	PCCA	89	82.040	ENSPSIG00000009154	PCCA	100	82.040	Pelodiscus_sinensis
ENSBTAG00000010672	PCCA	100	86.505	ENSPEMG00000009083	Pcca	100	86.505	Peromyscus_maniculatus_bairdii
ENSBTAG00000010672	PCCA	100	80.959	ENSPCIG00000027261	PCCA	100	80.959	Phascolarctos_cinereus
ENSBTAG00000010672	PCCA	96	73.418	ENSPFOG00000014855	pcca	98	73.418	Poecilia_formosa
ENSBTAG00000010672	PCCA	96	73.418	ENSPLAG00000016583	pcca	98	73.418	Poecilia_latipinna
ENSBTAG00000010672	PCCA	96	73.277	ENSPMEG00000011613	pcca	98	73.277	Poecilia_mexicana
ENSBTAG00000010672	PCCA	91	74.478	ENSPREG00000007537	pcca	100	74.478	Poecilia_reticulata
ENSBTAG00000010672	PCCA	100	87.584	ENSPPYG00000005473	PCCA	100	87.584	Pongo_abelii
ENSBTAG00000010672	PCCA	100	88.580	ENSPCOG00000015321	PCCA	100	88.580	Propithecus_coquereli
ENSBTAG00000010672	PCCA	91	74.815	ENSPNYG00000008226	pcca	100	74.815	Pundamilia_nyererei
ENSBTAG00000010672	PCCA	96	75.949	ENSPNAG00000011078	pcca	98	75.949	Pygocentrus_nattereri
ENSBTAG00000010672	PCCA	100	89.751	ENSRROG00000030936	PCCA	100	89.751	Rhinopithecus_roxellana
ENSBTAG00000010672	PCCA	100	89.165	ENSSBOG00000020005	PCCA	100	89.165	Saimiri_boliviensis_boliviensis
ENSBTAG00000010672	PCCA	51	93.696	ENSSHAG00000014732	-	100	93.696	Sarcophilus_harrisii
ENSBTAG00000010672	PCCA	96	77.637	ENSSFOG00015021986	pcca	98	77.637	Scleropages_formosus
ENSBTAG00000010672	PCCA	89	75.495	ENSSMAG00000018126	pcca	100	75.495	Scophthalmus_maximus
ENSBTAG00000010672	PCCA	96	74.121	ENSSDUG00000021326	pcca	98	75.000	Seriola_dumerili
ENSBTAG00000010672	PCCA	96	74.121	ENSSLDG00000016568	pcca	98	77.528	Seriola_lalandi_dorsalis
ENSBTAG00000010672	PCCA	87	81.123	ENSSPUG00000006036	PCCA	96	81.123	Sphenodon_punctatus
ENSBTAG00000010672	PCCA	94	74.208	ENSSPAG00000022191	pcca	94	70.697	Stegastes_partitus
ENSBTAG00000010672	PCCA	100	92.387	ENSSSCG00000009522	PCCA	100	92.387	Sus_scrofa
ENSBTAG00000010672	PCCA	95	80.654	ENSTGUG00000010915	PCCA	100	80.654	Taeniopygia_guttata
ENSBTAG00000010672	PCCA	96	74.438	ENSTRUG00000004990	pcca	97	76.396	Takifugu_rubripes
ENSBTAG00000010672	PCCA	100	88.291	ENSTTRG00000002569	PCCA	100	88.291	Tursiops_truncatus
ENSBTAG00000010672	PCCA	98	85.813	ENSUMAG00000023453	PCCA	100	92.237	Ursus_maritimus
ENSBTAG00000010672	PCCA	100	91.093	ENSVVUG00000013550	PCCA	100	92.529	Vulpes_vulpes
ENSBTAG00000010672	PCCA	91	74.925	ENSXCOG00000014159	pcca	100	74.925	Xiphophorus_couchianus
ENSBTAG00000010672	PCCA	96	73.418	ENSXMAG00000014869	pcca	98	73.418	Xiphophorus_maculatus