EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000011155 (Gene tree)
Gene ID: 540170
Gene Symbol: PUM2
Alias: -
Full Name: pumilio RNA binding family member 2
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 115233 bases
Position: chr11:78486240-78601472
Accession: 33570
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000065334	PUF	PF00806.19	4.4e-74	1	8
ENSBTAP00000065334	PUF	PF00806.19	4.4e-74	2	8
ENSBTAP00000065334	PUF	PF00806.19	4.4e-74	3	8
ENSBTAP00000065334	PUF	PF00806.19	4.4e-74	4	8
ENSBTAP00000065334	PUF	PF00806.19	4.4e-74	5	8
ENSBTAP00000065334	PUF	PF00806.19	4.4e-74	6	8
ENSBTAP00000065334	PUF	PF00806.19	4.4e-74	7	8
ENSBTAP00000065334	PUF	PF00806.19	4.4e-74	8	8
ENSBTAP00000061987	PUF	PF00806.19	5e-74	1	8
ENSBTAP00000061987	PUF	PF00806.19	5e-74	2	8
ENSBTAP00000061987	PUF	PF00806.19	5e-74	3	8
ENSBTAP00000061987	PUF	PF00806.19	5e-74	4	8
ENSBTAP00000061987	PUF	PF00806.19	5e-74	5	8
ENSBTAP00000061987	PUF	PF00806.19	5e-74	6	8
ENSBTAP00000061987	PUF	PF00806.19	5e-74	7	8
ENSBTAP00000061987	PUF	PF00806.19	5e-74	8	8
ENSBTAP00000014813	PUF	PF00806.19	6.1e-74	1	8
ENSBTAP00000014813	PUF	PF00806.19	6.1e-74	2	8
ENSBTAP00000014813	PUF	PF00806.19	6.1e-74	3	8
ENSBTAP00000014813	PUF	PF00806.19	6.1e-74	4	8
ENSBTAP00000014813	PUF	PF00806.19	6.1e-74	5	8
ENSBTAP00000014813	PUF	PF00806.19	6.1e-74	6	8
ENSBTAP00000014813	PUF	PF00806.19	6.1e-74	7	8
ENSBTAP00000014813	PUF	PF00806.19	6.1e-74	8	8
ENSBTAP00000067124	PUF	PF00806.19	1e-73	1	8
ENSBTAP00000067124	PUF	PF00806.19	1e-73	2	8
ENSBTAP00000067124	PUF	PF00806.19	1e-73	3	8
ENSBTAP00000067124	PUF	PF00806.19	1e-73	4	8
ENSBTAP00000067124	PUF	PF00806.19	1e-73	5	8
ENSBTAP00000067124	PUF	PF00806.19	1e-73	6	8
ENSBTAP00000067124	PUF	PF00806.19	1e-73	7	8
ENSBTAP00000067124	PUF	PF00806.19	1e-73	8	8
ENSBTAP00000071035	PUF	PF00806.19	4.8e-65	1	7
ENSBTAP00000071035	PUF	PF00806.19	4.8e-65	2	7
ENSBTAP00000071035	PUF	PF00806.19	4.8e-65	3	7
ENSBTAP00000071035	PUF	PF00806.19	4.8e-65	4	7
ENSBTAP00000071035	PUF	PF00806.19	4.8e-65	5	7
ENSBTAP00000071035	PUF	PF00806.19	4.8e-65	6	7
ENSBTAP00000071035	PUF	PF00806.19	4.8e-65	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000077223	-	4097	-	ENSBTAP00000065334	972 (aa)	-	-
ENSBTAT00000085921	-	4241	-	ENSBTAP00000071035	1020 (aa)	-	-
ENSBTAT00000014813	-	3478	-	ENSBTAP00000014813	1007 (aa)	-	F1N2B8
ENSBTAT00000075614	-	4370	-	ENSBTAP00000067124	1063 (aa)	XP_005213154	UPI00023ACFE0
ENSBTAT00000077811	-	4133	-	ENSBTAP00000061987	984 (aa)	XP_003586699	UPI00023ACFE1

Gene Model

Click here to download ENSBTAG00000011155's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000011155's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000011155	PUM2	100	89.320	ENSBTAG00000018979	PUM1	86	87.765

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000011155	PUM2	100	98.317	ENSG00000055917	PUM2	100	100.000	Homo_sapiens
ENSBTAG00000011155	PUM2	96	91.443	ENSAPOG00000015756	pum2	99	81.933	Acanthochromis_polyacanthus
ENSBTAG00000011155	PUM2	100	98.874	ENSAMEG00000002823	PUM2	100	98.874	Ailuropoda_melanoleuca
ENSBTAG00000011155	PUM2	90	86.071	ENSACIG00000010646	pum2	98	84.536	Amphilophus_citrinellus
ENSBTAG00000011155	PUM2	98	76.852	ENSAOCG00000016619	pum2	87	75.256	Amphiprion_ocellaris
ENSBTAG00000011155	PUM2	96	91.443	ENSAPEG00000019924	pum2	99	81.933	Amphiprion_percula
ENSBTAG00000011155	PUM2	100	78.947	ENSATEG00000015030	pum2	90	76.384	Anabas_testudineus
ENSBTAG00000011155	PUM2	100	94.109	ENSAPLG00000010496	PUM2	90	92.409	Anas_platyrhynchos
ENSBTAG00000011155	PUM2	100	93.178	ENSACAG00000010491	PUM2	100	92.127	Anolis_carolinensis
ENSBTAG00000011155	PUM2	100	98.416	ENSANAG00000021807	PUM2	100	98.405	Aotus_nancymaae
ENSBTAG00000011155	PUM2	100	78.516	ENSACLG00000022532	pum2	100	67.847	Astatotilapia_calliptera
ENSBTAG00000011155	PUM2	100	98.317	ENSCJAG00000007450	PUM2	100	98.311	Callithrix_jacchus
ENSBTAG00000011155	PUM2	100	99.247	ENSCAFG00000003839	PUM2	100	99.247	Canis_familiaris
ENSBTAG00000011155	PUM2	100	99.206	ENSCAFG00020025689	PUM2	100	97.866	Canis_lupus_dingo
ENSBTAG00000011155	PUM2	100	99.812	ENSCHIG00000022180	PUM2	100	99.812	Capra_hircus
ENSBTAG00000011155	PUM2	100	98.496	ENSTSYG00000014463	PUM2	100	98.496	Carlito_syrichta
ENSBTAG00000011155	PUM2	95	87.692	ENSCAPG00000016888	PUM2	96	98.958	Cavia_aperea
ENSBTAG00000011155	PUM2	100	97.753	ENSCPOG00000031996	PUM2	100	97.753	Cavia_porcellus
ENSBTAG00000011155	PUM2	100	98.515	ENSCCAG00000037035	PUM2	100	98.499	Cebus_capucinus
ENSBTAG00000011155	PUM2	100	98.499	ENSCATG00000043826	PUM2	100	98.499	Cercocebus_atys
ENSBTAG00000011155	PUM2	100	97.844	ENSCLAG00000006048	PUM2	100	97.844	Chinchilla_lanigera
ENSBTAG00000011155	PUM2	100	98.499	ENSCSAG00000008087	PUM2	100	98.499	Chlorocebus_sabaeus
ENSBTAG00000011155	PUM2	86	100.000	ENSCHOG00000004575	PUM2	86	100.000	Choloepus_hoffmanni
ENSBTAG00000011155	PUM2	100	91.903	ENSCPBG00000019966	PUM2	100	91.700	Chrysemys_picta_bellii
ENSBTAG00000011155	PUM2	100	98.405	ENSCANG00000032797	PUM2	100	98.405	Colobus_angolensis_palliatus
ENSBTAG00000011155	PUM2	100	97.561	ENSCGRG00001025023	Pum2	100	97.561	Cricetulus_griseus_chok1gshd
ENSBTAG00000011155	PUM2	100	97.561	ENSCGRG00000001580	Pum2	100	97.561	Cricetulus_griseus_crigri
ENSBTAG00000011155	PUM2	97	84.479	ENSCSEG00000020899	pum2	89	78.486	Cynoglossus_semilaevis
ENSBTAG00000011155	PUM2	100	78.516	ENSCVAG00000002426	pum2	100	75.458	Cyprinodon_variegatus
ENSBTAG00000011155	PUM2	100	79.607	ENSDARG00000061040	pum2	90	74.517	Danio_rerio
ENSBTAG00000011155	PUM2	100	95.665	ENSDNOG00000006733	PUM2	100	97.125	Dasypus_novemcinctus
ENSBTAG00000011155	PUM2	100	95.712	ENSDORG00000011453	Pum2	100	91.869	Dipodomys_ordii
ENSBTAG00000011155	PUM2	92	98.577	ENSETEG00000017683	PUM2	87	98.577	Echinops_telfairi
ENSBTAG00000011155	PUM2	95	72.936	ENSEBUG00000004435	pum2	92	85.071	Eptatretus_burgeri
ENSBTAG00000011155	PUM2	74	63.445	ENSEBUG00000014828	pum2	73	76.923	Eptatretus_burgeri
ENSBTAG00000011155	PUM2	100	99.153	ENSEASG00005009429	PUM2	100	99.153	Equus_asinus_asinus
ENSBTAG00000011155	PUM2	100	99.280	ENSECAG00000021930	PUM2	100	99.280	Equus_caballus
ENSBTAG00000011155	PUM2	91	92.377	ENSEEUG00000003224	-	80	93.237	Erinaceus_europaeus
ENSBTAG00000011155	PUM2	100	78.321	ENSELUG00000014997	pum2	90	74.656	Esox_lucius
ENSBTAG00000011155	PUM2	100	99.059	ENSFCAG00000027520	PUM2	100	99.059	Felis_catus
ENSBTAG00000011155	PUM2	100	94.419	ENSFALG00000001759	PUM2	100	93.158	Ficedula_albicollis
ENSBTAG00000011155	PUM2	100	97.004	ENSFDAG00000019685	PUM2	100	97.004	Fukomys_damarensis
ENSBTAG00000011155	PUM2	96	91.687	ENSFHEG00000021596	pum2	99	82.143	Fundulus_heteroclitus
ENSBTAG00000011155	PUM2	100	76.124	ENSGMOG00000006903	pum2	100	72.869	Gadus_morhua
ENSBTAG00000011155	PUM2	100	94.264	ENSGALG00000016481	PUM2	100	92.877	Gallus_gallus
ENSBTAG00000011155	PUM2	96	91.707	ENSGAFG00000013691	pum2	100	82.390	Gambusia_affinis
ENSBTAG00000011155	PUM2	100	77.984	ENSGACG00000009670	pum2	100	74.057	Gasterosteus_aculeatus
ENSBTAG00000011155	PUM2	100	93.643	ENSGAGG00000020698	PUM2	100	92.409	Gopherus_agassizii
ENSBTAG00000011155	PUM2	100	98.499	ENSGGOG00000011374	PUM2	100	98.499	Gorilla_gorilla
ENSBTAG00000011155	PUM2	100	86.076	ENSHBUG00000016453	pum2	90	70.131	Haplochromis_burtoni
ENSBTAG00000011155	PUM2	100	95.842	ENSHGLG00000007892	PUM2	100	95.216	Heterocephalus_glaber_female
ENSBTAG00000011155	PUM2	100	96.552	ENSHGLG00100015510	PUM2	100	94.761	Heterocephalus_glaber_male
ENSBTAG00000011155	PUM2	99	91.687	ENSHCOG00000010119	pum2	81	91.748	Hippocampus_comes
ENSBTAG00000011155	PUM2	100	98.967	ENSSTOG00000006262	PUM2	100	98.967	Ictidomys_tridecemlineatus
ENSBTAG00000011155	PUM2	100	97.755	ENSJJAG00000020969	Pum2	100	97.755	Jaculus_jaculus
ENSBTAG00000011155	PUM2	99	78.207	ENSKMAG00000017216	pum2	100	70.758	Kryptolebias_marmoratus
ENSBTAG00000011155	PUM2	99	91.241	ENSLBEG00000020488	pum2	83	91.304	Labrus_bergylta
ENSBTAG00000011155	PUM2	100	92.535	ENSLACG00000008723	PUM2	89	90.392	Latimeria_chalumnae
ENSBTAG00000011155	PUM2	100	89.319	ENSLOCG00000017196	pum2	83	93.882	Lepisosteus_oculatus
ENSBTAG00000011155	PUM2	100	97.383	ENSLAFG00000009278	PUM2	100	97.383	Loxodonta_africana
ENSBTAG00000011155	PUM2	100	98.405	ENSMFAG00000000492	PUM2	100	98.405	Macaca_fascicularis
ENSBTAG00000011155	PUM2	100	98.405	ENSMMUG00000023181	PUM2	100	98.405	Macaca_mulatta
ENSBTAG00000011155	PUM2	100	98.405	ENSMNEG00000039659	PUM2	100	98.405	Macaca_nemestrina
ENSBTAG00000011155	PUM2	100	98.499	ENSMLEG00000039243	PUM2	100	98.499	Mandrillus_leucophaeus
ENSBTAG00000011155	PUM2	100	78.638	ENSMAMG00000006121	pum2	90	76.617	Mastacembelus_armatus
ENSBTAG00000011155	PUM2	100	78.760	ENSMZEG00005000791	pum2	100	67.847	Maylandia_zebra
ENSBTAG00000011155	PUM2	100	94.264	ENSMGAG00000014040	PUM2	100	92.877	Meleagris_gallopavo
ENSBTAG00000011155	PUM2	100	97.659	ENSMAUG00000000311	Pum2	100	97.659	Mesocricetus_auratus
ENSBTAG00000011155	PUM2	100	98.968	ENSMICG00000011647	PUM2	100	98.968	Microcebus_murinus
ENSBTAG00000011155	PUM2	100	97.842	ENSMOCG00000013663	Pum2	100	97.842	Microtus_ochrogaster
ENSBTAG00000011155	PUM2	100	79.037	ENSMMOG00000002975	pum2	100	75.161	Mola_mola
ENSBTAG00000011155	PUM2	99	92.923	ENSMODG00000009811	PUM2	100	90.596	Monodelphis_domestica
ENSBTAG00000011155	PUM2	91	91.198	ENSMALG00000022313	pum2	99	82.353	Monopterus_albus
ENSBTAG00000011155	PUM2	100	97.840	MGP_CAROLIEiJ_G0017603	Pum2	100	98.643	Mus_caroli
ENSBTAG00000011155	PUM2	100	97.746	ENSMUSG00000020594	Pum2	99	99.095	Mus_musculus
ENSBTAG00000011155	PUM2	100	97.751	MGP_PahariEiJ_G0029361	Pum2	100	99.548	Mus_pahari
ENSBTAG00000011155	PUM2	100	97.746	MGP_SPRETEiJ_G0018447	Pum2	100	99.095	Mus_spretus
ENSBTAG00000011155	PUM2	100	99.247	ENSMPUG00000013734	PUM2	100	99.247	Mustela_putorius_furo
ENSBTAG00000011155	PUM2	100	98.498	ENSMLUG00000007362	PUM2	100	98.498	Myotis_lucifugus
ENSBTAG00000011155	PUM2	100	97.936	ENSNGAG00000016665	-	100	97.936	Nannospalax_galili
ENSBTAG00000011155	PUM2	99	66.830	ENSNGAG00000016239	-	99	70.727	Nannospalax_galili
ENSBTAG00000011155	PUM2	100	79.101	ENSNBRG00000020737	pum2	99	70.787	Neolamprologus_brichardi
ENSBTAG00000011155	PUM2	100	98.499	ENSNLEG00000002509	PUM2	99	99.511	Nomascus_leucogenys
ENSBTAG00000011155	PUM2	99	91.077	ENSMEUG00000016567	PUM2	93	89.859	Notamacropus_eugenii
ENSBTAG00000011155	PUM2	76	88.591	ENSOPRG00000001963	PUM2	85	94.040	Ochotona_princeps
ENSBTAG00000011155	PUM2	100	97.657	ENSODEG00000007823	PUM2	100	97.657	Octodon_degus
ENSBTAG00000011155	PUM2	100	78.760	ENSONIG00000006119	pum2	90	76.661	Oreochromis_niloticus
ENSBTAG00000011155	PUM2	100	98.407	ENSOCUG00000017908	PUM2	100	98.407	Oryctolagus_cuniculus
ENSBTAG00000011155	PUM2	100	78.793	ENSORLG00000012611	pum2	100	75.251	Oryzias_latipes
ENSBTAG00000011155	PUM2	100	78.638	ENSORLG00020014452	pum2	100	75.150	Oryzias_latipes_hni
ENSBTAG00000011155	PUM2	100	78.947	ENSORLG00015009427	pum2	90	74.653	Oryzias_latipes_hsok
ENSBTAG00000011155	PUM2	100	83.613	ENSOMEG00000005889	pum2	99	82.353	Oryzias_melastigma
ENSBTAG00000011155	PUM2	98	98.201	ENSOGAG00000002187	PUM2	100	98.201	Otolemur_garnettii
ENSBTAG00000011155	PUM2	100	99.624	ENSOARG00000017236	PUM2	100	99.624	Ovis_aries
ENSBTAG00000011155	PUM2	100	98.499	ENSPPAG00000023095	PUM2	100	98.499	Pan_paniscus
ENSBTAG00000011155	PUM2	100	99.059	ENSPPRG00000021443	PUM2	100	99.059	Panthera_pardus
ENSBTAG00000011155	PUM2	100	99.059	ENSPTIG00000018982	PUM2	100	99.059	Panthera_tigris_altaica
ENSBTAG00000011155	PUM2	100	98.499	ENSPTRG00000011692	PUM2	100	98.499	Pan_troglodytes
ENSBTAG00000011155	PUM2	100	92.486	ENSPANG00000009393	PUM2	100	98.592	Papio_anubis
ENSBTAG00000011155	PUM2	100	74.880	ENSPKIG00000023195	pum2	99	83.171	Paramormyrops_kingsleyae
ENSBTAG00000011155	PUM2	100	93.798	ENSPSIG00000011626	PUM2	88	92.502	Pelodiscus_sinensis
ENSBTAG00000011155	PUM2	100	73.795	ENSPMGG00000016123	pum2	100	75.175	Periophthalmus_magnuspinnatus
ENSBTAG00000011155	PUM2	100	97.097	ENSPEMG00000008357	Pum2	100	97.097	Peromyscus_maniculatus_bairdii
ENSBTAG00000011155	PUM2	100	75.266	ENSPMAG00000007038	pum2	93	84.375	Petromyzon_marinus
ENSBTAG00000011155	PUM2	100	90.141	ENSPCIG00000022139	PUM2	100	90.543	Phascolarctos_cinereus
ENSBTAG00000011155	PUM2	100	76.682	ENSPFOG00000019208	pum2	90	74.549	Poecilia_formosa
ENSBTAG00000011155	PUM2	96	91.707	ENSPLAG00000001826	pum2	100	82.390	Poecilia_latipinna
ENSBTAG00000011155	PUM2	100	79.380	ENSPMEG00000015766	pum2	90	76.199	Poecilia_mexicana
ENSBTAG00000011155	PUM2	91	91.463	ENSPREG00000006905	pum2	100	82.180	Poecilia_reticulata
ENSBTAG00000011155	PUM2	100	98.687	ENSPPYG00000012617	PUM2	100	98.687	Pongo_abelii
ENSBTAG00000011155	PUM2	76	100.000	ENSPCAG00000008001	PUM2	70	100.000	Procavia_capensis
ENSBTAG00000011155	PUM2	100	98.814	ENSPCOG00000019636	PUM2	100	98.972	Propithecus_coquereli
ENSBTAG00000011155	PUM2	98	98.725	ENSPVAG00000002920	PUM2	100	93.511	Pteropus_vampyrus
ENSBTAG00000011155	PUM2	100	78.516	ENSPNYG00000022901	pum2	89	76.243	Pundamilia_nyererei
ENSBTAG00000011155	PUM2	98	78.444	ENSPNAG00000008025	pum2	100	75.232	Pygocentrus_nattereri
ENSBTAG00000011155	PUM2	100	97.368	ENSRNOG00000006180	Pum2	100	97.368	Rattus_norvegicus
ENSBTAG00000011155	PUM2	100	98.405	ENSRBIG00000044880	PUM2	100	98.405	Rhinopithecus_bieti
ENSBTAG00000011155	PUM2	100	98.515	ENSSBOG00000022007	PUM2	100	98.499	Saimiri_boliviensis_boliviensis
ENSBTAG00000011155	PUM2	100	92.308	ENSSHAG00000002778	PUM2	100	89.483	Sarcophilus_harrisii
ENSBTAG00000011155	PUM2	87	86.768	ENSSFOG00015003476	pum2	80	91.569	Scleropages_formosus
ENSBTAG00000011155	PUM2	100	78.241	ENSSMAG00000018236	pum2	100	68.667	Scophthalmus_maximus
ENSBTAG00000011155	PUM2	94	74.147	ENSSDUG00000001800	pum2	87	76.701	Seriola_dumerili
ENSBTAG00000011155	PUM2	100	78.516	ENSSLDG00000000981	pum2	90	76.335	Seriola_lalandi_dorsalis
ENSBTAG00000011155	PUM2	96	90.968	ENSSARG00000010992	PUM2	86	90.650	Sorex_araneus
ENSBTAG00000011155	PUM2	100	93.670	ENSSPUG00000017012	PUM2	99	92.337	Sphenodon_punctatus
ENSBTAG00000011155	PUM2	96	91.443	ENSSPAG00000022948	pum2	99	81.933	Stegastes_partitus
ENSBTAG00000011155	PUM2	100	99.436	ENSSSCG00000008600	PUM2	100	99.436	Sus_scrofa
ENSBTAG00000011155	PUM2	100	94.419	ENSTGUG00000013149	PUM2	100	93.158	Taeniopygia_guttata
ENSBTAG00000011155	PUM2	100	79.503	ENSTRUG00000018167	pum2	83	79.719	Takifugu_rubripes
ENSBTAG00000011155	PUM2	99	77.898	ENSTNIG00000003116	pum2	90	74.931	Tetraodon_nigroviridis
ENSBTAG00000011155	PUM2	86	98.780	ENSTBEG00000008729	PUM2	86	98.780	Tupaia_belangeri
ENSBTAG00000011155	PUM2	100	99.117	ENSTTRG00000004887	PUM2	100	98.967	Tursiops_truncatus
ENSBTAG00000011155	PUM2	76	99.092	ENSUAMG00000008120	PUM2	98	99.275	Ursus_americanus
ENSBTAG00000011155	PUM2	100	99.247	ENSUMAG00000023198	PUM2	100	99.247	Ursus_maritimus
ENSBTAG00000011155	PUM2	100	99.061	ENSVPAG00000005056	PUM2	100	99.061	Vicugna_pacos
ENSBTAG00000011155	PUM2	100	99.341	ENSVVUG00000014829	PUM2	100	99.341	Vulpes_vulpes
ENSBTAG00000011155	PUM2	100	86.111	ENSXETG00000008903	pum2	90	80.912	Xenopus_tropicalis
ENSBTAG00000011155	PUM2	94	74.066	ENSXCOG00000002556	pum2	87	76.446	Xiphophorus_couchianus
ENSBTAG00000011155	PUM2	96	91.707	ENSXMAG00000017682	pum2	100	82.390	Xiphophorus_maculatus