EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000011247 (Gene tree)
Gene ID: 533550
Gene Symbol: ZC3HC1
Alias: -
Full Name: Bos taurus zinc finger C3HC-type containing 1 (ZC3HC1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 16243 bases
Position: chr4:93819542-93835784
Accession: NM_001034591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000014941	zf-C3HC	PF07967.13	3.1e-36	1	1
ENSBTAP00000014941	Rsm1	PF08600.10	2.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000014941	-	2152	-	ENSBTAP00000014941	502 (aa)	-	Q3SZH2

Gene Model

Click here to download ENSBTAG00000011247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000011247's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000011247	ZC3HC1	99	91.218	ENSG00000091732	ZC3HC1	99	91.218	Homo_sapiens
ENSBTAG00000011247	ZC3HC1	95	45.436	ENSAPOG00000009078	zc3hc1	95	44.646	Acanthochromis_polyacanthus
ENSBTAG00000011247	ZC3HC1	100	90.476	ENSAMEG00000005425	ZC3HC1	100	90.476	Ailuropoda_melanoleuca
ENSBTAG00000011247	ZC3HC1	95	43.030	ENSACIG00000019513	zc3hc1	95	42.455	Amphilophus_citrinellus
ENSBTAG00000011247	ZC3HC1	95	46.653	ENSAOCG00000024310	zc3hc1	95	45.253	Amphiprion_ocellaris
ENSBTAG00000011247	ZC3HC1	95	46.653	ENSAPEG00000004907	zc3hc1	95	45.253	Amphiprion_percula
ENSBTAG00000011247	ZC3HC1	81	47.518	ENSATEG00000016898	zc3hc1	85	46.948	Anabas_testudineus
ENSBTAG00000011247	ZC3HC1	88	61.348	ENSAPLG00000003832	ZC3HC1	99	61.348	Anas_platyrhynchos
ENSBTAG00000011247	ZC3HC1	100	59.922	ENSACAG00000001638	ZC3HC1	100	59.922	Anolis_carolinensis
ENSBTAG00000011247	ZC3HC1	100	88.668	ENSANAG00000022213	ZC3HC1	100	90.000	Aotus_nancymaae
ENSBTAG00000011247	ZC3HC1	88	45.591	ENSACLG00000025033	zc3hc1	98	44.754	Astatotilapia_calliptera
ENSBTAG00000011247	ZC3HC1	94	44.099	ENSAMXG00000036792	zc3hc1	97	44.099	Astyanax_mexicanus
ENSBTAG00000011247	ZC3HC1	100	89.442	ENSCJAG00000010536	ZC3HC1	100	89.442	Callithrix_jacchus
ENSBTAG00000011247	ZC3HC1	100	90.693	ENSCAFG00000001499	-	99	90.693	Canis_familiaris
ENSBTAG00000011247	ZC3HC1	100	90.438	ENSCAFG00000028735	-	100	90.438	Canis_familiaris
ENSBTAG00000011247	ZC3HC1	100	90.837	ENSCAFG00000031850	-	100	90.837	Canis_familiaris
ENSBTAG00000011247	ZC3HC1	100	90.438	ENSCAFG00000029401	-	99	90.438	Canis_familiaris
ENSBTAG00000011247	ZC3HC1	100	90.637	ENSCAFG00020006829	-	100	90.637	Canis_lupus_dingo
ENSBTAG00000011247	ZC3HC1	100	89.683	ENSCAFG00020023333	-	100	89.683	Canis_lupus_dingo
ENSBTAG00000011247	ZC3HC1	100	90.837	ENSCHIG00000014103	ZC3HC1	100	90.837	Capra_hircus
ENSBTAG00000011247	ZC3HC1	100	87.849	ENSTSYG00000002843	ZC3HC1	100	87.849	Carlito_syrichta
ENSBTAG00000011247	ZC3HC1	90	62.061	ENSCAPG00000016300	ZC3HC1	92	74.286	Cavia_aperea
ENSBTAG00000011247	ZC3HC1	100	83.865	ENSCPOG00000014034	ZC3HC1	100	83.466	Cavia_porcellus
ENSBTAG00000011247	ZC3HC1	100	72.709	ENSCCAG00000020384	ZC3HC1	100	88.546	Cebus_capucinus
ENSBTAG00000011247	ZC3HC1	100	91.036	ENSCATG00000023130	ZC3HC1	100	91.471	Cercocebus_atys
ENSBTAG00000011247	ZC3HC1	100	62.351	ENSCLAG00000008260	ZC3HC1	100	60.437	Chinchilla_lanigera
ENSBTAG00000011247	ZC3HC1	73	92.077	ENSCSAG00000009881	ZC3HC1	97	92.077	Chlorocebus_sabaeus
ENSBTAG00000011247	ZC3HC1	90	88.914	ENSCHOG00000011846	ZC3HC1	99	88.914	Choloepus_hoffmanni
ENSBTAG00000011247	ZC3HC1	96	68.050	ENSCPBG00000017519	ZC3HC1	96	68.050	Chrysemys_picta_bellii
ENSBTAG00000011247	ZC3HC1	100	90.837	ENSCANG00000029091	ZC3HC1	100	90.837	Colobus_angolensis_palliatus
ENSBTAG00000011247	ZC3HC1	100	86.056	ENSCGRG00001018805	Zc3hc1	100	86.056	Cricetulus_griseus_chok1gshd
ENSBTAG00000011247	ZC3HC1	100	84.861	ENSCGRG00000017114	Zc3hc1	100	84.861	Cricetulus_griseus_crigri
ENSBTAG00000011247	ZC3HC1	96	43.750	ENSCSEG00000009284	zc3hc1	95	43.164	Cynoglossus_semilaevis
ENSBTAG00000011247	ZC3HC1	94	43.177	ENSCVAG00000011566	zc3hc1	94	42.566	Cyprinodon_variegatus
ENSBTAG00000011247	ZC3HC1	97	47.129	ENSDARG00000062651	zc3hc1	97	46.535	Danio_rerio
ENSBTAG00000011247	ZC3HC1	100	87.450	ENSDNOG00000045016	ZC3HC1	100	87.450	Dasypus_novemcinctus
ENSBTAG00000011247	ZC3HC1	100	78.088	ENSDORG00000008697	Zc3hc1	100	78.088	Dipodomys_ordii
ENSBTAG00000011247	ZC3HC1	90	91.372	ENSEASG00005008789	ZC3HC1	97	91.372	Equus_asinus_asinus
ENSBTAG00000011247	ZC3HC1	100	90.457	ENSECAG00000017886	ZC3HC1	100	90.457	Equus_caballus
ENSBTAG00000011247	ZC3HC1	84	82.716	ENSEEUG00000003123	ZC3HC1	84	82.716	Erinaceus_europaeus
ENSBTAG00000011247	ZC3HC1	94	44.082	ENSELUG00000023168	zc3hc1	94	44.399	Esox_lucius
ENSBTAG00000011247	ZC3HC1	100	89.442	ENSFCAG00000010429	ZC3HC1	100	91.176	Felis_catus
ENSBTAG00000011247	ZC3HC1	90	59.829	ENSFALG00000005006	ZC3HC1	100	59.829	Ficedula_albicollis
ENSBTAG00000011247	ZC3HC1	100	85.458	ENSFDAG00000019897	ZC3HC1	100	86.471	Fukomys_damarensis
ENSBTAG00000011247	ZC3HC1	96	42.970	ENSFHEG00000020149	zc3hc1	99	41.031	Fundulus_heteroclitus
ENSBTAG00000011247	ZC3HC1	94	41.358	ENSGMOG00000002914	zc3hc1	95	41.942	Gadus_morhua
ENSBTAG00000011247	ZC3HC1	99	61.155	ENSGALG00000008003	ZC3HC1	99	61.155	Gallus_gallus
ENSBTAG00000011247	ZC3HC1	96	43.952	ENSGAFG00000016095	zc3hc1	96	43.373	Gambusia_affinis
ENSBTAG00000011247	ZC3HC1	94	45.567	ENSGACG00000019706	zc3hc1	94	45.585	Gasterosteus_aculeatus
ENSBTAG00000011247	ZC3HC1	77	69.054	ENSGAGG00000016106	ZC3HC1	100	69.054	Gopherus_agassizii
ENSBTAG00000011247	ZC3HC1	99	91.218	ENSGGOG00000015504	ZC3HC1	99	91.218	Gorilla_gorilla
ENSBTAG00000011247	ZC3HC1	96	44.578	ENSHBUG00000008347	zc3hc1	96	43.825	Haplochromis_burtoni
ENSBTAG00000011247	ZC3HC1	100	86.653	ENSHGLG00000005085	ZC3HC1	100	87.647	Heterocephalus_glaber_female
ENSBTAG00000011247	ZC3HC1	100	86.454	ENSHGLG00100011395	ZC3HC1	100	87.647	Heterocephalus_glaber_male
ENSBTAG00000011247	ZC3HC1	95	42.387	ENSHCOG00000014309	zc3hc1	95	43.093	Hippocampus_comes
ENSBTAG00000011247	ZC3HC1	100	88.446	ENSSTOG00000023599	-	100	88.446	Ictidomys_tridecemlineatus
ENSBTAG00000011247	ZC3HC1	94	45.399	ENSKMAG00000015315	zc3hc1	88	44.376	Kryptolebias_marmoratus
ENSBTAG00000011247	ZC3HC1	95	45.079	ENSLBEG00000017325	zc3hc1	95	44.118	Labrus_bergylta
ENSBTAG00000011247	ZC3HC1	79	54.348	ENSLACG00000013032	ZC3HC1	98	54.348	Latimeria_chalumnae
ENSBTAG00000011247	ZC3HC1	99	51.479	ENSLOCG00000015963	zc3hc1	99	51.772	Lepisosteus_oculatus
ENSBTAG00000011247	ZC3HC1	100	86.957	ENSLAFG00000001292	ZC3HC1	100	86.957	Loxodonta_africana
ENSBTAG00000011247	ZC3HC1	100	91.235	ENSMFAG00000030176	ZC3HC1	100	91.471	Macaca_fascicularis
ENSBTAG00000011247	ZC3HC1	100	90.060	ENSMMUG00000006155	ZC3HC1	100	91.471	Macaca_mulatta
ENSBTAG00000011247	ZC3HC1	100	91.434	ENSMNEG00000011833	ZC3HC1	100	91.471	Macaca_nemestrina
ENSBTAG00000011247	ZC3HC1	100	91.235	ENSMLEG00000027328	ZC3HC1	100	91.471	Mandrillus_leucophaeus
ENSBTAG00000011247	ZC3HC1	94	45.492	ENSMAMG00000010691	zc3hc1	95	44.668	Mastacembelus_armatus
ENSBTAG00000011247	ZC3HC1	96	44.378	ENSMZEG00005007142	zc3hc1	96	43.625	Maylandia_zebra
ENSBTAG00000011247	ZC3HC1	95	61.728	ENSMGAG00000002977	ZC3HC1	97	62.346	Meleagris_gallopavo
ENSBTAG00000011247	ZC3HC1	82	79.759	ENSMAUG00000017032	Zc3hc1	92	79.759	Mesocricetus_auratus
ENSBTAG00000011247	ZC3HC1	100	90.239	ENSMICG00000009167	ZC3HC1	100	90.294	Microcebus_murinus
ENSBTAG00000011247	ZC3HC1	100	85.458	ENSMOCG00000015239	Zc3hc1	100	85.458	Microtus_ochrogaster
ENSBTAG00000011247	ZC3HC1	85	43.333	ENSMMOG00000002204	zc3hc1	98	42.889	Mola_mola
ENSBTAG00000011247	ZC3HC1	100	62.115	ENSMODG00000014630	ZC3HC1	100	62.115	Monodelphis_domestica
ENSBTAG00000011247	ZC3HC1	95	44.130	ENSMALG00000014447	zc3hc1	96	44.689	Monopterus_albus
ENSBTAG00000011247	ZC3HC1	100	84.861	MGP_CAROLIEiJ_G0028183	Zc3hc1	100	84.861	Mus_caroli
ENSBTAG00000011247	ZC3HC1	100	84.861	ENSMUSG00000039130	Zc3hc1	100	84.861	Mus_musculus
ENSBTAG00000011247	ZC3HC1	100	78.088	MGP_PahariEiJ_G0021941	Zc3hc1	100	78.088	Mus_pahari
ENSBTAG00000011247	ZC3HC1	100	85.060	MGP_SPRETEiJ_G0029183	Zc3hc1	100	85.060	Mus_spretus
ENSBTAG00000011247	ZC3HC1	95	90.188	ENSMPUG00000005297	ZC3HC1	95	90.188	Mustela_putorius_furo
ENSBTAG00000011247	ZC3HC1	67	83.090	ENSMLUG00000029228	-	99	83.090	Myotis_lucifugus
ENSBTAG00000011247	ZC3HC1	100	88.515	ENSMLUG00000000063	-	100	88.515	Myotis_lucifugus
ENSBTAG00000011247	ZC3HC1	100	85.288	ENSNGAG00000019014	Zc3hc1	100	85.288	Nannospalax_galili
ENSBTAG00000011247	ZC3HC1	96	44.289	ENSNBRG00000004577	zc3hc1	96	43.713	Neolamprologus_brichardi
ENSBTAG00000011247	ZC3HC1	99	89.820	ENSNLEG00000012698	ZC3HC1	99	90.294	Nomascus_leucogenys
ENSBTAG00000011247	ZC3HC1	100	75.697	ENSMEUG00000011023	ZC3HC1	100	75.697	Notamacropus_eugenii
ENSBTAG00000011247	ZC3HC1	65	82.558	ENSOPRG00000007867	-	67	82.558	Ochotona_princeps
ENSBTAG00000011247	ZC3HC1	100	83.665	ENSODEG00000014604	ZC3HC1	100	85.294	Octodon_degus
ENSBTAG00000011247	ZC3HC1	94	45.175	ENSONIG00000011644	zc3hc1	94	44.581	Oreochromis_niloticus
ENSBTAG00000011247	ZC3HC1	90	68.966	ENSOANG00000011460	ZC3HC1	100	68.966	Ornithorhynchus_anatinus
ENSBTAG00000011247	ZC3HC1	100	85.149	ENSOCUG00000017137	ZC3HC1	100	85.149	Oryctolagus_cuniculus
ENSBTAG00000011247	ZC3HC1	95	43.611	ENSORLG00000014409	zc3hc1	94	43.838	Oryzias_latipes
ENSBTAG00000011247	ZC3HC1	95	44.242	ENSORLG00020015874	zc3hc1	94	44.467	Oryzias_latipes_hni
ENSBTAG00000011247	ZC3HC1	95	44.040	ENSORLG00015014641	zc3hc1	94	44.266	Oryzias_latipes_hsok
ENSBTAG00000011247	ZC3HC1	95	44.877	ENSOMEG00000000215	zc3hc1	95	45.102	Oryzias_melastigma
ENSBTAG00000011247	ZC3HC1	95	44.877	ENSOMEG00000020604	zc3hc1	95	45.102	Oryzias_melastigma
ENSBTAG00000011247	ZC3HC1	100	83.267	ENSOGAG00000026193	ZC3HC1	100	83.267	Otolemur_garnettii
ENSBTAG00000011247	ZC3HC1	100	97.030	ENSOARG00000004907	ZC3HC1	99	97.030	Ovis_aries
ENSBTAG00000011247	ZC3HC1	99	91.417	ENSPPAG00000043172	ZC3HC1	99	91.471	Pan_paniscus
ENSBTAG00000011247	ZC3HC1	100	88.645	ENSPPRG00000001004	ZC3HC1	100	90.882	Panthera_pardus
ENSBTAG00000011247	ZC3HC1	100	89.243	ENSPTIG00000007823	ZC3HC1	100	91.176	Panthera_tigris_altaica
ENSBTAG00000011247	ZC3HC1	99	91.218	ENSPTRG00000019685	ZC3HC1	99	91.218	Pan_troglodytes
ENSBTAG00000011247	ZC3HC1	100	89.861	ENSPANG00000014229	ZC3HC1	100	91.176	Papio_anubis
ENSBTAG00000011247	ZC3HC1	96	48.571	ENSPKIG00000007172	zc3hc1	97	48.880	Paramormyrops_kingsleyae
ENSBTAG00000011247	ZC3HC1	93	63.180	ENSPSIG00000016646	ZC3HC1	100	60.819	Pelodiscus_sinensis
ENSBTAG00000011247	ZC3HC1	95	40.600	ENSPMGG00000003548	zc3hc1	96	40.481	Periophthalmus_magnuspinnatus
ENSBTAG00000011247	ZC3HC1	100	85.458	ENSPEMG00000000514	Zc3hc1	100	85.458	Peromyscus_maniculatus_bairdii
ENSBTAG00000011247	ZC3HC1	99	73.453	ENSPCIG00000020619	ZC3HC1	100	77.121	Phascolarctos_cinereus
ENSBTAG00000011247	ZC3HC1	96	42.717	ENSPFOG00000003466	zc3hc1	96	42.353	Poecilia_formosa
ENSBTAG00000011247	ZC3HC1	96	42.520	ENSPLAG00000022211	zc3hc1	96	42.157	Poecilia_latipinna
ENSBTAG00000011247	ZC3HC1	96	42.717	ENSPMEG00000001458	zc3hc1	96	42.353	Poecilia_mexicana
ENSBTAG00000011247	ZC3HC1	96	42.717	ENSPREG00000004004	zc3hc1	96	42.157	Poecilia_reticulata
ENSBTAG00000011247	ZC3HC1	99	82.903	ENSPPYG00000017998	ZC3HC1	99	82.903	Pongo_abelii
ENSBTAG00000011247	ZC3HC1	92	85.000	ENSPCAG00000001182	ZC3HC1	100	85.000	Procavia_capensis
ENSBTAG00000011247	ZC3HC1	100	90.239	ENSPCOG00000017354	ZC3HC1	100	90.588	Propithecus_coquereli
ENSBTAG00000011247	ZC3HC1	100	84.064	ENSPVAG00000003195	ZC3HC1	100	83.865	Pteropus_vampyrus
ENSBTAG00000011247	ZC3HC1	96	44.378	ENSPNYG00000020692	zc3hc1	96	43.625	Pundamilia_nyererei
ENSBTAG00000011247	ZC3HC1	93	44.538	ENSPNAG00000020746	zc3hc1	95	44.328	Pygocentrus_nattereri
ENSBTAG00000011247	ZC3HC1	100	85.288	ENSRNOG00000010154	Zc3hc1	100	85.288	Rattus_norvegicus
ENSBTAG00000011247	ZC3HC1	90	91.611	ENSRBIG00000029409	ZC3HC1	100	91.611	Rhinopithecus_bieti
ENSBTAG00000011247	ZC3HC1	100	90.837	ENSRROG00000041831	ZC3HC1	100	90.837	Rhinopithecus_roxellana
ENSBTAG00000011247	ZC3HC1	88	88.525	ENSSBOG00000032787	ZC3HC1	100	88.525	Saimiri_boliviensis_boliviensis
ENSBTAG00000011247	ZC3HC1	92	76.559	ENSSHAG00000002529	ZC3HC1	100	76.559	Sarcophilus_harrisii
ENSBTAG00000011247	ZC3HC1	95	49.487	ENSSFOG00015003667	zc3hc1	91	48.984	Scleropages_formosus
ENSBTAG00000011247	ZC3HC1	95	44.643	ENSSMAG00000000647	zc3hc1	86	43.800	Scophthalmus_maximus
ENSBTAG00000011247	ZC3HC1	95	45.825	ENSSDUG00000004241	zc3hc1	93	45.030	Seriola_dumerili
ENSBTAG00000011247	ZC3HC1	95	45.418	ENSSLDG00000025056	zc3hc1	93	45.030	Seriola_lalandi_dorsalis
ENSBTAG00000011247	ZC3HC1	99	77.445	ENSSARG00000012013	ZC3HC1	99	77.445	Sorex_araneus
ENSBTAG00000011247	ZC3HC1	86	58.391	ENSSPUG00000000778	ZC3HC1	86	58.391	Sphenodon_punctatus
ENSBTAG00000011247	ZC3HC1	95	45.842	ENSSPAG00000020041	zc3hc1	95	45.253	Stegastes_partitus
ENSBTAG00000011247	ZC3HC1	100	92.032	ENSSSCG00000016565	ZC3HC1	100	92.032	Sus_scrofa
ENSBTAG00000011247	ZC3HC1	94	43.685	ENSTRUG00000020077	zc3hc1	95	43.033	Takifugu_rubripes
ENSBTAG00000011247	ZC3HC1	94	43.532	ENSTNIG00000007585	zc3hc1	99	43.354	Tetraodon_nigroviridis
ENSBTAG00000011247	ZC3HC1	99	79.840	ENSTBEG00000005216	ZC3HC1	99	79.840	Tupaia_belangeri
ENSBTAG00000011247	ZC3HC1	95	91.458	ENSTTRG00000008458	ZC3HC1	100	91.458	Tursiops_truncatus
ENSBTAG00000011247	ZC3HC1	100	91.235	ENSUAMG00000020249	ZC3HC1	100	91.235	Ursus_americanus
ENSBTAG00000011247	ZC3HC1	100	90.837	ENSUMAG00000009268	ZC3HC1	100	90.837	Ursus_maritimus
ENSBTAG00000011247	ZC3HC1	77	93.878	ENSVPAG00000010846	ZC3HC1	77	93.878	Vicugna_pacos
ENSBTAG00000011247	ZC3HC1	96	90.417	ENSVVUG00000012386	ZC3HC1	99	90.417	Vulpes_vulpes
ENSBTAG00000011247	ZC3HC1	90	53.247	ENSXETG00000033900	zc3hc1	94	53.247	Xenopus_tropicalis
ENSBTAG00000011247	ZC3HC1	96	44.242	ENSXCOG00000013570	zc3hc1	96	43.662	Xiphophorus_couchianus
ENSBTAG00000011247	ZC3HC1	87	46.256	ENSXMAG00000010979	zc3hc1	95	45.553	Xiphophorus_maculatus