EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000011285 (Gene tree)
Gene ID: 540872
Gene Symbol: TRMT1L
Alias: -
Full Name: Bos taurus tRNA methyltransferase 1 like (TRMT1L)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 34706 bases
Position: chr16:66131785-66166490
Accession: NM_001098121
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000014994	TRM	PF02005.16	3.1e-67	1	2
ENSBTAP00000014994	TRM	PF02005.16	3.1e-67	2	2
ENSBTAP00000063764	TRM	PF02005.16	4.2e-67	1	2
ENSBTAP00000063764	TRM	PF02005.16	4.2e-67	2	2
ENSBTAP00000014994	Met_10	PF02475.16	9.1e-05	1	1
ENSBTAP00000063764	Met_10	PF02475.16	9.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000014994	-	3518	-	ENSBTAP00000014994	737 (aa)	-	A5D7S3
ENSBTAT00000084181	-	2355	-	ENSBTAP00000063764	784 (aa)	XP_005217437	UPI000D53903D

Gene Model

Click here to download ENSBTAG00000011285's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000011285's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000011285	TRMT1L	100	90.958	ENSG00000121486	TRMT1L	99	97.129	Homo_sapiens
ENSBTAG00000011285	TRMT1L	85	61.890	ENSAPOG00000011807	trmt1l	98	58.494	Acanthochromis_polyacanthus
ENSBTAG00000011285	TRMT1L	100	92.713	ENSAMEG00000013538	TRMT1L	100	92.443	Ailuropoda_melanoleuca
ENSBTAG00000011285	TRMT1L	66	64.066	ENSACIG00000012049	trmt1l	94	64.066	Amphilophus_citrinellus
ENSBTAG00000011285	TRMT1L	84	63.328	ENSAOCG00000018112	trmt1l	97	63.183	Amphiprion_ocellaris
ENSBTAG00000011285	TRMT1L	85	62.205	ENSAPEG00000021433	trmt1l	97	62.441	Amphiprion_percula
ENSBTAG00000011285	TRMT1L	87	61.846	ENSATEG00000004573	trmt1l	99	64.157	Anabas_testudineus
ENSBTAG00000011285	TRMT1L	96	70.563	ENSAPLG00000008394	TRMT1L	93	73.374	Anas_platyrhynchos
ENSBTAG00000011285	TRMT1L	94	69.658	ENSACAG00000002342	TRMT1L	97	70.621	Anolis_carolinensis
ENSBTAG00000011285	TRMT1L	100	91.093	ENSANAG00000038162	TRMT1L	100	91.768	Aotus_nancymaae
ENSBTAG00000011285	TRMT1L	85	62.128	ENSACLG00000021625	trmt1l	92	61.912	Astatotilapia_calliptera
ENSBTAG00000011285	TRMT1L	87	61.810	ENSAMXG00000009602	trmt1l	91	61.810	Astyanax_mexicanus
ENSBTAG00000011285	TRMT1L	100	89.069	ENSCJAG00000005456	TRMT1L	100	89.474	Callithrix_jacchus
ENSBTAG00000011285	TRMT1L	99	91.105	ENSCAFG00000013518	TRMT1L	98	91.914	Canis_familiaris
ENSBTAG00000011285	TRMT1L	100	91.117	ENSCAFG00020015640	TRMT1L	100	91.925	Canis_lupus_dingo
ENSBTAG00000011285	TRMT1L	100	99.053	ENSCHIG00000016522	TRMT1L	100	99.053	Capra_hircus
ENSBTAG00000011285	TRMT1L	95	91.051	ENSTSYG00000010465	TRMT1L	100	88.124	Carlito_syrichta
ENSBTAG00000011285	TRMT1L	71	89.493	ENSCAPG00000012562	TRMT1L	88	89.493	Cavia_aperea
ENSBTAG00000011285	TRMT1L	100	88.092	ENSCPOG00000001567	TRMT1L	100	87.957	Cavia_porcellus
ENSBTAG00000011285	TRMT1L	100	90.418	ENSCCAG00000018699	TRMT1L	100	91.093	Cebus_capucinus
ENSBTAG00000011285	TRMT1L	97	91.632	ENSCATG00000043114	TRMT1L	100	91.521	Cercocebus_atys
ENSBTAG00000011285	TRMT1L	96	91.972	ENSCLAG00000010801	-	100	89.581	Chinchilla_lanigera
ENSBTAG00000011285	TRMT1L	98	72.061	ENSCLAG00000010853	-	98	72.147	Chinchilla_lanigera
ENSBTAG00000011285	TRMT1L	97	91.632	ENSCSAG00000012880	TRMT1L	100	91.521	Chlorocebus_sabaeus
ENSBTAG00000011285	TRMT1L	63	97.531	ENSCHOG00000011164	TRMT1L	76	97.531	Choloepus_hoffmanni
ENSBTAG00000011285	TRMT1L	88	78.671	ENSCPBG00000015694	TRMT1L	92	77.914	Chrysemys_picta_bellii
ENSBTAG00000011285	TRMT1L	97	91.074	ENSCANG00000031107	TRMT1L	100	90.983	Colobus_angolensis_palliatus
ENSBTAG00000011285	TRMT1L	100	85.290	ENSCGRG00001019297	Trmt1l	100	85.695	Cricetulus_griseus_chok1gshd
ENSBTAG00000011285	TRMT1L	100	85.290	ENSCGRG00000005036	Trmt1l	100	85.695	Cricetulus_griseus_crigri
ENSBTAG00000011285	TRMT1L	87	60.398	ENSCSEG00000001248	trmt1l	97	59.939	Cynoglossus_semilaevis
ENSBTAG00000011285	TRMT1L	88	59.389	ENSCVAG00000012274	trmt1l	97	59.480	Cyprinodon_variegatus
ENSBTAG00000011285	TRMT1L	87	60.522	ENSDARG00000042057	trmt1l	94	63.029	Danio_rerio
ENSBTAG00000011285	TRMT1L	100	89.204	ENSDNOG00000005239	TRMT1L	100	89.204	Dasypus_novemcinctus
ENSBTAG00000011285	TRMT1L	90	89.687	ENSDORG00000003298	Trmt1l	99	89.649	Dipodomys_ordii
ENSBTAG00000011285	TRMT1L	72	97.942	ENSETEG00000015895	TRMT1L	83	97.942	Echinops_telfairi
ENSBTAG00000011285	TRMT1L	87	47.196	ENSEBUG00000010301	trmt1l	97	47.894	Eptatretus_burgeri
ENSBTAG00000011285	TRMT1L	100	89.623	ENSEASG00005005551	TRMT1L	100	89.623	Equus_asinus_asinus
ENSBTAG00000011285	TRMT1L	99	93.784	ENSECAG00000020999	TRMT1L	95	93.784	Equus_caballus
ENSBTAG00000011285	TRMT1L	92	81.716	ENSEEUG00000014110	TRMT1L	92	81.716	Erinaceus_europaeus
ENSBTAG00000011285	TRMT1L	89	61.343	ENSELUG00000020587	trmt1l	89	62.992	Esox_lucius
ENSBTAG00000011285	TRMT1L	100	92.578	ENSFCAG00000011285	TRMT1L	100	91.790	Felis_catus
ENSBTAG00000011285	TRMT1L	88	72.171	ENSFALG00000003177	TRMT1L	100	72.171	Ficedula_albicollis
ENSBTAG00000011285	TRMT1L	100	89.459	ENSFDAG00000008822	TRMT1L	100	87.838	Fukomys_damarensis
ENSBTAG00000011285	TRMT1L	72	63.956	ENSFHEG00000014328	trmt1l	99	63.956	Fundulus_heteroclitus
ENSBTAG00000011285	TRMT1L	86	61.635	ENSGMOG00000009535	trmt1l	99	61.224	Gadus_morhua
ENSBTAG00000011285	TRMT1L	88	73.302	ENSGALG00000033077	TRMT1L	93	70.042	Gallus_gallus
ENSBTAG00000011285	TRMT1L	90	58.728	ENSGAFG00000012445	trmt1l	93	59.480	Gambusia_affinis
ENSBTAG00000011285	TRMT1L	84	62.540	ENSGACG00000005050	trmt1l	97	63.803	Gasterosteus_aculeatus
ENSBTAG00000011285	TRMT1L	89	76.748	ENSGAGG00000007441	TRMT1L	92	74.079	Gopherus_agassizii
ENSBTAG00000011285	TRMT1L	100	90.958	ENSGGOG00000011778	TRMT1L	100	91.633	Gorilla_gorilla
ENSBTAG00000011285	TRMT1L	85	61.599	ENSHBUG00000000622	trmt1l	96	64.068	Haplochromis_burtoni
ENSBTAG00000011285	TRMT1L	100	85.250	ENSHGLG00000003135	-	100	84.303	Heterocephalus_glaber_female
ENSBTAG00000011285	TRMT1L	100	75.936	ENSHGLG00000012595	-	99	75.401	Heterocephalus_glaber_female
ENSBTAG00000011285	TRMT1L	100	90.257	ENSHGLG00100019412	-	100	89.310	Heterocephalus_glaber_male
ENSBTAG00000011285	TRMT1L	100	75.936	ENSHGLG00100004569	-	99	75.401	Heterocephalus_glaber_male
ENSBTAG00000011285	TRMT1L	84	61.943	ENSIPUG00000008873	trmt1l	99	60.720	Ictalurus_punctatus
ENSBTAG00000011285	TRMT1L	100	91.340	ENSSTOG00000010332	TRMT1L	100	90.528	Ictidomys_tridecemlineatus
ENSBTAG00000011285	TRMT1L	96	85.352	ENSJJAG00000010929	Trmt1l	100	82.773	Jaculus_jaculus
ENSBTAG00000011285	TRMT1L	84	62.359	ENSKMAG00000010310	trmt1l	90	62.843	Kryptolebias_marmoratus
ENSBTAG00000011285	TRMT1L	82	59.061	ENSLBEG00000007982	-	92	60.575	Labrus_bergylta
ENSBTAG00000011285	TRMT1L	91	58.884	ENSLBEG00000003487	trmt1l	93	60.245	Labrus_bergylta
ENSBTAG00000011285	TRMT1L	87	67.945	ENSLACG00000008447	TRMT1L	99	65.976	Latimeria_chalumnae
ENSBTAG00000011285	TRMT1L	86	64.186	ENSLOCG00000001781	trmt1l	91	63.833	Lepisosteus_oculatus
ENSBTAG00000011285	TRMT1L	100	89.581	ENSLAFG00000004339	TRMT1L	100	88.664	Loxodonta_africana
ENSBTAG00000011285	TRMT1L	97	91.492	ENSMFAG00000037592	TRMT1L	100	91.386	Macaca_fascicularis
ENSBTAG00000011285	TRMT1L	97	91.353	ENSMMUG00000013879	TRMT1L	100	91.252	Macaca_mulatta
ENSBTAG00000011285	TRMT1L	97	91.632	ENSMNEG00000041637	TRMT1L	100	91.521	Macaca_nemestrina
ENSBTAG00000011285	TRMT1L	97	91.492	ENSMLEG00000004840	TRMT1L	100	91.386	Mandrillus_leucophaeus
ENSBTAG00000011285	TRMT1L	86	60.156	ENSMAMG00000015305	trmt1l	98	63.029	Mastacembelus_armatus
ENSBTAG00000011285	TRMT1L	85	61.972	ENSMZEG00005017822	trmt1l	92	61.755	Maylandia_zebra
ENSBTAG00000011285	TRMT1L	88	72.435	ENSMGAG00000000930	TRMT1L	99	72.435	Meleagris_gallopavo
ENSBTAG00000011285	TRMT1L	96	83.077	ENSMAUG00000019870	Trmt1l	100	81.586	Mesocricetus_auratus
ENSBTAG00000011285	TRMT1L	100	91.363	ENSMICG00000009494	TRMT1L	100	92.038	Microcebus_murinus
ENSBTAG00000011285	TRMT1L	100	84.668	ENSMOCG00000016453	Trmt1l	100	85.075	Microtus_ochrogaster
ENSBTAG00000011285	TRMT1L	83	61.477	ENSMMOG00000016961	trmt1l	97	61.316	Mola_mola
ENSBTAG00000011285	TRMT1L	91	80.089	ENSMODG00000007454	TRMT1L	82	80.085	Monodelphis_domestica
ENSBTAG00000011285	TRMT1L	88	60.000	ENSMALG00000019306	trmt1l	91	61.672	Monopterus_albus
ENSBTAG00000011285	TRMT1L	100	85.521	MGP_CAROLIEiJ_G0014693	Trmt1l	100	85.521	Mus_caroli
ENSBTAG00000011285	TRMT1L	100	85.792	ENSMUSG00000053286	Trmt1l	100	85.792	Mus_musculus
ENSBTAG00000011285	TRMT1L	100	85.830	MGP_PahariEiJ_G0027929	Trmt1l	100	85.521	Mus_pahari
ENSBTAG00000011285	TRMT1L	87	85.686	MGP_SPRETEiJ_G0015500	Trmt1l	100	85.827	Mus_spretus
ENSBTAG00000011285	TRMT1L	100	88.005	ENSMPUG00000011859	TRMT1L	100	88.679	Mustela_putorius_furo
ENSBTAG00000011285	TRMT1L	96	92.504	ENSMLUG00000001136	TRMT1L	100	90.392	Myotis_lucifugus
ENSBTAG00000011285	TRMT1L	100	85.250	ENSNGAG00000011685	Trmt1l	100	85.250	Nannospalax_galili
ENSBTAG00000011285	TRMT1L	61	69.032	ENSNBRG00000004053	trmt1l	94	68.919	Neolamprologus_brichardi
ENSBTAG00000011285	TRMT1L	100	91.633	ENSNLEG00000018030	TRMT1L	100	92.308	Nomascus_leucogenys
ENSBTAG00000011285	TRMT1L	78	73.188	ENSMEUG00000011344	TRMT1L	85	71.739	Notamacropus_eugenii
ENSBTAG00000011285	TRMT1L	88	76.417	ENSOPRG00000000680	TRMT1L	99	76.417	Ochotona_princeps
ENSBTAG00000011285	TRMT1L	100	84.709	ENSODEG00000000826	TRMT1L	100	83.762	Octodon_degus
ENSBTAG00000011285	TRMT1L	87	60.823	ENSONIG00000007823	trmt1l	100	63.636	Oreochromis_niloticus
ENSBTAG00000011285	TRMT1L	88	77.231	ENSOANG00000001010	TRMT1L	99	77.504	Ornithorhynchus_anatinus
ENSBTAG00000011285	TRMT1L	90	86.507	ENSOCUG00000004896	TRMT1L	99	87.198	Oryctolagus_cuniculus
ENSBTAG00000011285	TRMT1L	83	62.379	ENSORLG00000029610	trmt1l	96	63.805	Oryzias_latipes
ENSBTAG00000011285	TRMT1L	83	62.379	ENSORLG00020002203	trmt1l	92	61.562	Oryzias_latipes_hni
ENSBTAG00000011285	TRMT1L	83	62.379	ENSORLG00015021512	trmt1l	92	61.562	Oryzias_latipes_hsok
ENSBTAG00000011285	TRMT1L	79	60.417	ENSOMEG00000016275	trmt1l	87	60.038	Oryzias_melastigma
ENSBTAG00000011285	TRMT1L	88	80.650	ENSOGAG00000016186	TRMT1L	100	80.526	Otolemur_garnettii
ENSBTAG00000011285	TRMT1L	100	98.782	ENSOARG00000003786	TRMT1L	100	98.782	Ovis_aries
ENSBTAG00000011285	TRMT1L	100	91.093	ENSPPAG00000029141	TRMT1L	100	91.768	Pan_paniscus
ENSBTAG00000011285	TRMT1L	100	92.443	ENSPPRG00000023981	TRMT1L	100	91.655	Panthera_pardus
ENSBTAG00000011285	TRMT1L	100	92.578	ENSPTIG00000021754	TRMT1L	100	91.790	Panthera_tigris_altaica
ENSBTAG00000011285	TRMT1L	100	91.093	ENSPTRG00000001776	TRMT1L	100	91.768	Pan_troglodytes
ENSBTAG00000011285	TRMT1L	97	88.595	ENSPANG00000020890	TRMT1L	100	88.591	Papio_anubis
ENSBTAG00000011285	TRMT1L	88	61.271	ENSPKIG00000005941	trmt1l	89	62.835	Paramormyrops_kingsleyae
ENSBTAG00000011285	TRMT1L	88	77.469	ENSPSIG00000010011	TRMT1L	95	77.315	Pelodiscus_sinensis
ENSBTAG00000011285	TRMT1L	73	58.514	ENSPMGG00000021359	trmt1l	95	58.439	Periophthalmus_magnuspinnatus
ENSBTAG00000011285	TRMT1L	100	84.980	ENSPEMG00000000031	Trmt1l	100	84.980	Peromyscus_maniculatus_bairdii
ENSBTAG00000011285	TRMT1L	84	57.827	ENSPMAG00000005838	trmt1l	100	57.735	Petromyzon_marinus
ENSBTAG00000011285	TRMT1L	99	75.068	ENSPCIG00000002409	TRMT1L	94	80.342	Phascolarctos_cinereus
ENSBTAG00000011285	TRMT1L	88	59.459	ENSPFOG00000003872	trmt1l	99	62.031	Poecilia_formosa
ENSBTAG00000011285	TRMT1L	87	60.030	ENSPLAG00000010387	trmt1l	93	60.154	Poecilia_latipinna
ENSBTAG00000011285	TRMT1L	88	59.459	ENSPMEG00000011828	trmt1l	99	62.233	Poecilia_mexicana
ENSBTAG00000011285	TRMT1L	86	60.340	ENSPREG00000002866	trmt1l	92	60.340	Poecilia_reticulata
ENSBTAG00000011285	TRMT1L	100	90.958	ENSPPYG00000000416	TRMT1L	100	91.633	Pongo_abelii
ENSBTAG00000011285	TRMT1L	88	89.464	ENSPCAG00000008257	TRMT1L	89	89.033	Procavia_capensis
ENSBTAG00000011285	TRMT1L	87	81.683	ENSPCOG00000005682	TRMT1L	93	81.683	Propithecus_coquereli
ENSBTAG00000011285	TRMT1L	100	82.726	ENSPVAG00000005961	TRMT1L	100	81.781	Pteropus_vampyrus
ENSBTAG00000011285	TRMT1L	85	60.664	ENSPNYG00000005607	trmt1l	96	64.237	Pundamilia_nyererei
ENSBTAG00000011285	TRMT1L	85	61.705	ENSPNAG00000004389	trmt1l	90	61.025	Pygocentrus_nattereri
ENSBTAG00000011285	TRMT1L	100	84.844	ENSRNOG00000002580	Trmt1l	100	84.844	Rattus_norvegicus
ENSBTAG00000011285	TRMT1L	97	91.353	ENSRBIG00000042589	TRMT1L	100	91.252	Rhinopithecus_bieti
ENSBTAG00000011285	TRMT1L	97	91.353	ENSRROG00000032183	TRMT1L	100	91.252	Rhinopithecus_roxellana
ENSBTAG00000011285	TRMT1L	100	90.013	ENSSBOG00000029282	TRMT1L	100	90.553	Saimiri_boliviensis_boliviensis
ENSBTAG00000011285	TRMT1L	88	61.991	ENSSFOG00015004878	trmt1l	93	61.934	Scleropages_formosus
ENSBTAG00000011285	TRMT1L	55	69.231	ENSSMAG00000015425	trmt1l	90	69.231	Scophthalmus_maximus
ENSBTAG00000011285	TRMT1L	87	61.503	ENSSDUG00000021807	trmt1l	97	65.093	Seriola_dumerili
ENSBTAG00000011285	TRMT1L	84	62.981	ENSSLDG00000016579	trmt1l	97	64.924	Seriola_lalandi_dorsalis
ENSBTAG00000011285	TRMT1L	65	83.721	ENSSARG00000010135	TRMT1L	87	83.721	Sorex_araneus
ENSBTAG00000011285	TRMT1L	80	78.655	ENSSPUG00000003927	TRMT1L	98	77.479	Sphenodon_punctatus
ENSBTAG00000011285	TRMT1L	88	61.398	ENSSPAG00000008597	trmt1l	94	61.398	Stegastes_partitus
ENSBTAG00000011285	TRMT1L	99	90.191	ENSSSCG00000021393	TRMT1L	100	89.272	Sus_scrofa
ENSBTAG00000011285	TRMT1L	88	72.643	ENSTGUG00000003737	TRMT1L	96	72.643	Taeniopygia_guttata
ENSBTAG00000011285	TRMT1L	83	59.390	ENSTRUG00000002396	trmt1l	98	55.447	Takifugu_rubripes
ENSBTAG00000011285	TRMT1L	57	64.941	ENSTNIG00000005534	trmt1l	99	64.941	Tetraodon_nigroviridis
ENSBTAG00000011285	TRMT1L	87	84.653	ENSTBEG00000016498	TRMT1L	86	84.653	Tupaia_belangeri
ENSBTAG00000011285	TRMT1L	100	91.240	ENSTTRG00000005892	TRMT1L	100	90.566	Tursiops_truncatus
ENSBTAG00000011285	TRMT1L	100	92.713	ENSUAMG00000020936	TRMT1L	100	92.308	Ursus_americanus
ENSBTAG00000011285	TRMT1L	99	92.568	ENSUMAG00000021919	TRMT1L	99	92.162	Ursus_maritimus
ENSBTAG00000011285	TRMT1L	88	94.954	ENSVPAG00000011854	TRMT1L	100	94.954	Vicugna_pacos
ENSBTAG00000011285	TRMT1L	100	90.983	ENSVVUG00000009166	TRMT1L	100	91.925	Vulpes_vulpes
ENSBTAG00000011285	TRMT1L	69	60.311	ENSXETG00000004539	trmt1l	97	59.506	Xenopus_tropicalis
ENSBTAG00000011285	TRMT1L	80	61.785	ENSXCOG00000007372	trmt1l	92	61.785	Xiphophorus_couchianus
ENSBTAG00000011285	TRMT1L	89	59.309	ENSXMAG00000003575	trmt1l	98	62.126	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	-	IEA	Function
GO:0007610	behavior	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function