EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000011304 (Gene tree)
Gene ID: 517417
Gene Symbol: XRN2
Alias: -
Full Name: Bos taurus 5'-3' exoribonuclease 2 (XRN2)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 62795 bases
Position: chr13:40615497-40678291
Accession: NM_001192472
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000065802	XRN_N	PF03159.18	6.5e-103	1	1
ENSBTAP00000015019	XRN_N	PF03159.18	6.8e-103	1	1
ENSBTAP00000057327	XRN_N	PF03159.18	7.3e-103	1	1
ENSBTAP00000073281	XRN_N	PF03159.18	6.7e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
					(aa)

Gene Model

Click here to download ENSBTAG00000011304's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03008	Ribosome biogenesis in eukaryotes	KEGG
bta03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000011304's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000011304	XRN2	100	95.794	ENSG00000088930	XRN2	100	95.794	Homo_sapiens
ENSBTAG00000011304	XRN2	97	71.095	ENSAPOG00000009818	xrn2	100	69.857	Acanthochromis_polyacanthus
ENSBTAG00000011304	XRN2	100	96.425	ENSAMEG00000012581	XRN2	100	96.425	Ailuropoda_melanoleuca
ENSBTAG00000011304	XRN2	90	71.231	ENSACIG00000015047	xrn2	95	74.856	Amphilophus_citrinellus
ENSBTAG00000011304	XRN2	97	71.795	ENSAOCG00000023632	xrn2	100	70.558	Amphiprion_ocellaris
ENSBTAG00000011304	XRN2	97	71.626	ENSAPEG00000014871	xrn2	100	70.367	Amphiprion_percula
ENSBTAG00000011304	XRN2	95	71.861	ENSATEG00000001273	xrn2	97	71.172	Anabas_testudineus
ENSBTAG00000011304	XRN2	100	82.242	ENSAPLG00000013869	XRN2	99	82.777	Anas_platyrhynchos
ENSBTAG00000011304	XRN2	100	81.339	ENSACAG00000005565	XRN2	100	80.331	Anolis_carolinensis
ENSBTAG00000011304	XRN2	100	95.373	ENSANAG00000020126	XRN2	100	95.373	Aotus_nancymaae
ENSBTAG00000011304	XRN2	90	73.210	ENSACLG00000010522	xrn2	96	76.667	Astatotilapia_calliptera
ENSBTAG00000011304	XRN2	100	70.498	ENSAMXG00000018301	xrn2	100	70.498	Astyanax_mexicanus
ENSBTAG00000011304	XRN2	86	54.895	WBGene00006964	xrn-2	88	54.724	Caenorhabditis_elegans
ENSBTAG00000011304	XRN2	100	95.478	ENSCJAG00000005611	XRN2	100	95.478	Callithrix_jacchus
ENSBTAG00000011304	XRN2	100	96.425	ENSCAFG00000005185	XRN2	100	96.425	Canis_familiaris
ENSBTAG00000011304	XRN2	100	96.425	ENSCAFG00020027479	XRN2	100	96.425	Canis_lupus_dingo
ENSBTAG00000011304	XRN2	100	98.843	ENSCHIG00000006921	XRN2	100	98.843	Capra_hircus
ENSBTAG00000011304	XRN2	100	95.373	ENSTSYG00000008315	XRN2	100	95.373	Carlito_syrichta
ENSBTAG00000011304	XRN2	100	80.846	ENSCAPG00000010773	XRN2	99	80.711	Cavia_aperea
ENSBTAG00000011304	XRN2	100	95.584	ENSCPOG00000009407	XRN2	100	95.584	Cavia_porcellus
ENSBTAG00000011304	XRN2	100	96.004	ENSCATG00000040350	XRN2	100	96.004	Cercocebus_atys
ENSBTAG00000011304	XRN2	100	96.109	ENSCLAG00000013419	XRN2	100	96.109	Chinchilla_lanigera
ENSBTAG00000011304	XRN2	100	96.004	ENSCSAG00000011094	XRN2	100	96.004	Chlorocebus_sabaeus
ENSBTAG00000011304	XRN2	71	97.849	ENSCHOG00000013404	XRN2	70	97.849	Choloepus_hoffmanni
ENSBTAG00000011304	XRN2	100	84.511	ENSCPBG00000023533	XRN2	100	85.031	Chrysemys_picta_bellii
ENSBTAG00000011304	XRN2	86	60.621	ENSCING00000022336	-	100	60.859	Ciona_intestinalis
ENSBTAG00000011304	XRN2	87	59.308	ENSCSAVG00000011217	-	100	62.357	Ciona_savignyi
ENSBTAG00000011304	XRN2	100	96.004	ENSCANG00000040240	XRN2	100	96.004	Colobus_angolensis_palliatus
ENSBTAG00000011304	XRN2	98	94.194	ENSCGRG00001010676	Xrn2	99	94.194	Cricetulus_griseus_chok1gshd
ENSBTAG00000011304	XRN2	100	93.215	ENSCGRG00000006378	Xrn2	99	93.427	Cricetulus_griseus_crigri
ENSBTAG00000011304	XRN2	55	72.157	ENSCSEG00000005628	xrn2	100	72.157	Cynoglossus_semilaevis
ENSBTAG00000011304	XRN2	89	71.494	ENSCVAG00000018999	xrn2	98	77.143	Cyprinodon_variegatus
ENSBTAG00000011304	XRN2	100	69.775	ENSDARG00000101900	xrn2	96	78.626	Danio_rerio
ENSBTAG00000011304	XRN2	100	95.163	ENSDNOG00000001895	XRN2	100	95.163	Dasypus_novemcinctus
ENSBTAG00000011304	XRN2	100	95.386	ENSDORG00000005434	Xrn2	100	95.386	Dipodomys_ordii
ENSBTAG00000011304	XRN2	86	57.557	FBgn0031868	Rat1	89	56.631	Drosophila_melanogaster
ENSBTAG00000011304	XRN2	94	92.533	ENSETEG00000001740	XRN2	90	92.533	Echinops_telfairi
ENSBTAG00000011304	XRN2	84	71.515	ENSEBUG00000016136	xrn2	100	71.515	Eptatretus_burgeri
ENSBTAG00000011304	XRN2	100	96.004	ENSEASG00005002484	XRN2	100	96.004	Equus_asinus_asinus
ENSBTAG00000011304	XRN2	99	95.886	ENSECAG00000018988	XRN2	96	100.000	Equus_caballus
ENSBTAG00000011304	XRN2	80	100.000	ENSEEUG00000009265	XRN2	80	100.000	Erinaceus_europaeus
ENSBTAG00000011304	XRN2	100	70.082	ENSELUG00000000552	xrn2	100	70.492	Esox_lucius
ENSBTAG00000011304	XRN2	100	96.215	ENSFCAG00000007970	XRN2	100	96.215	Felis_catus
ENSBTAG00000011304	XRN2	100	82.075	ENSFALG00000004508	XRN2	100	82.495	Ficedula_albicollis
ENSBTAG00000011304	XRN2	100	96.004	ENSFDAG00000016311	XRN2	100	96.004	Fukomys_damarensis
ENSBTAG00000011304	XRN2	55	70.038	ENSFHEG00000013039	xrn2	98	70.038	Fundulus_heteroclitus
ENSBTAG00000011304	XRN2	86	72.539	ENSGMOG00000013436	xrn2	100	72.539	Gadus_morhua
ENSBTAG00000011304	XRN2	100	82.199	ENSGALG00000008372	XRN2	100	82.199	Gallus_gallus
ENSBTAG00000011304	XRN2	89	73.256	ENSGAFG00000014284	xrn2	98	73.256	Gambusia_affinis
ENSBTAG00000011304	XRN2	87	74.368	ENSGACG00000011870	xrn2	96	77.992	Gasterosteus_aculeatus
ENSBTAG00000011304	XRN2	100	84.200	ENSGAGG00000004884	XRN2	100	84.719	Gopherus_agassizii
ENSBTAG00000011304	XRN2	100	96.004	ENSGGOG00000013738	XRN2	100	96.004	Gorilla_gorilla
ENSBTAG00000011304	XRN2	55	74.856	ENSHBUG00000005077	xrn2	96	76.667	Haplochromis_burtoni
ENSBTAG00000011304	XRN2	100	94.848	ENSHGLG00000014831	XRN2	100	94.742	Heterocephalus_glaber_female
ENSBTAG00000011304	XRN2	100	94.848	ENSHGLG00100013130	XRN2	100	94.742	Heterocephalus_glaber_male
ENSBTAG00000011304	XRN2	99	67.745	ENSHCOG00000011994	xrn2	99	68.655	Hippocampus_comes
ENSBTAG00000011304	XRN2	100	69.215	ENSIPUG00000006639	xrn2	100	69.215	Ictalurus_punctatus
ENSBTAG00000011304	XRN2	100	95.899	ENSSTOG00000000589	XRN2	100	95.899	Ictidomys_tridecemlineatus
ENSBTAG00000011304	XRN2	100	94.637	ENSJJAG00000022128	Xrn2	100	94.637	Jaculus_jaculus
ENSBTAG00000011304	XRN2	55	79.492	ENSLBEG00000010041	xrn2	100	79.492	Labrus_bergylta
ENSBTAG00000011304	XRN2	96	76.835	ENSLACG00000008307	XRN2	99	79.387	Latimeria_chalumnae
ENSBTAG00000011304	XRN2	99	72.518	ENSLOCG00000016874	xrn2	100	72.518	Lepisosteus_oculatus
ENSBTAG00000011304	XRN2	100	94.427	ENSLAFG00000014624	XRN2	100	94.427	Loxodonta_africana
ENSBTAG00000011304	XRN2	100	96.004	ENSMFAG00000038122	XRN2	100	96.004	Macaca_fascicularis
ENSBTAG00000011304	XRN2	100	96.004	ENSMMUG00000011405	XRN2	100	96.004	Macaca_mulatta
ENSBTAG00000011304	XRN2	100	96.109	ENSMNEG00000040626	XRN2	100	96.109	Macaca_nemestrina
ENSBTAG00000011304	XRN2	100	96.004	ENSMLEG00000041897	XRN2	100	96.004	Mandrillus_leucophaeus
ENSBTAG00000011304	XRN2	95	72.192	ENSMAMG00000008633	xrn2	98	70.693	Mastacembelus_armatus
ENSBTAG00000011304	XRN2	90	75.173	ENSMZEG00005022362	xrn2	97	75.173	Maylandia_zebra
ENSBTAG00000011304	XRN2	99	80.625	ENSMGAG00000003196	XRN2	99	80.625	Meleagris_gallopavo
ENSBTAG00000011304	XRN2	100	94.427	ENSMAUG00000021842	Xrn2	100	94.427	Mesocricetus_auratus
ENSBTAG00000011304	XRN2	100	95.478	ENSMICG00000008126	XRN2	100	95.478	Microcebus_murinus
ENSBTAG00000011304	XRN2	100	94.217	ENSMOCG00000012588	Xrn2	100	94.217	Microtus_ochrogaster
ENSBTAG00000011304	XRN2	89	73.081	ENSMMOG00000017576	xrn2	96	74.242	Mola_mola
ENSBTAG00000011304	XRN2	100	89.590	ENSMODG00000006163	XRN2	100	89.590	Monodelphis_domestica
ENSBTAG00000011304	XRN2	91	71.493	ENSMALG00000011355	xrn2	95	75.908	Monopterus_albus
ENSBTAG00000011304	XRN2	100	93.277	MGP_CAROLIEiJ_G0024400	Xrn2	100	93.277	Mus_caroli
ENSBTAG00000011304	XRN2	100	93.487	ENSMUSG00000027433	Xrn2	100	93.487	Mus_musculus
ENSBTAG00000011304	XRN2	100	93.277	MGP_PahariEiJ_G0025843	Xrn2	100	93.277	Mus_pahari
ENSBTAG00000011304	XRN2	100	93.487	MGP_SPRETEiJ_G0025318	Xrn2	100	93.487	Mus_spretus
ENSBTAG00000011304	XRN2	100	94.628	ENSMPUG00000001198	XRN2	93	94.628	Mustela_putorius_furo
ENSBTAG00000011304	XRN2	100	95.689	ENSMLUG00000001536	XRN2	100	95.689	Myotis_lucifugus
ENSBTAG00000011304	XRN2	100	94.637	ENSNGAG00000018138	Xrn2	100	94.637	Nannospalax_galili
ENSBTAG00000011304	XRN2	90	75.376	ENSNBRG00000008062	xrn2	96	76.667	Neolamprologus_brichardi
ENSBTAG00000011304	XRN2	100	95.899	ENSNLEG00000009991	XRN2	100	95.899	Nomascus_leucogenys
ENSBTAG00000011304	XRN2	67	97.778	ENSMEUG00000008622	-	67	97.778	Notamacropus_eugenii
ENSBTAG00000011304	XRN2	78	79.581	ENSOPRG00000001397	-	77	79.581	Ochotona_princeps
ENSBTAG00000011304	XRN2	99	86.359	ENSODEG00000000860	-	99	87.392	Octodon_degus
ENSBTAG00000011304	XRN2	100	96.109	ENSODEG00000010745	-	100	96.109	Octodon_degus
ENSBTAG00000011304	XRN2	100	71.267	ENSONIG00000018720	xrn2	100	71.473	Oreochromis_niloticus
ENSBTAG00000011304	XRN2	100	90.021	ENSOANG00000015673	XRN2	100	90.021	Ornithorhynchus_anatinus
ENSBTAG00000011304	XRN2	100	95.794	ENSOCUG00000013468	XRN2	100	95.794	Oryctolagus_cuniculus
ENSBTAG00000011304	XRN2	98	69.886	ENSORLG00000017213	xrn2	97	74.480	Oryzias_latipes
ENSBTAG00000011304	XRN2	98	69.886	ENSORLG00020001824	xrn2	100	69.450	Oryzias_latipes_hni
ENSBTAG00000011304	XRN2	98	69.678	ENSORLG00015019747	xrn2	100	69.348	Oryzias_latipes_hsok
ENSBTAG00000011304	XRN2	90	73.903	ENSOMEG00000019820	xrn2	100	69.574	Oryzias_melastigma
ENSBTAG00000011304	XRN2	100	94.748	ENSOGAG00000001068	XRN2	100	94.748	Otolemur_garnettii
ENSBTAG00000011304	XRN2	100	98.885	ENSOARG00000004443	XRN2	100	98.920	Ovis_aries
ENSBTAG00000011304	XRN2	100	96.004	ENSPPAG00000033549	XRN2	100	96.004	Pan_paniscus
ENSBTAG00000011304	XRN2	100	96.215	ENSPPRG00000008732	XRN2	100	96.215	Panthera_pardus
ENSBTAG00000011304	XRN2	100	95.987	ENSPTIG00000015683	XRN2	97	96.112	Panthera_tigris_altaica
ENSBTAG00000011304	XRN2	100	96.004	ENSPTRG00000013308	XRN2	100	96.004	Pan_troglodytes
ENSBTAG00000011304	XRN2	100	96.004	ENSPANG00000018088	XRN2	100	96.004	Papio_anubis
ENSBTAG00000011304	XRN2	100	70.317	ENSPKIG00000016889	xrn2	100	70.317	Paramormyrops_kingsleyae
ENSBTAG00000011304	XRN2	85	86.494	ENSPSIG00000014666	XRN2	100	86.494	Pelodiscus_sinensis
ENSBTAG00000011304	XRN2	100	93.796	ENSPEMG00000000111	Xrn2	100	93.796	Peromyscus_maniculatus_bairdii
ENSBTAG00000011304	XRN2	100	69.087	ENSPFOG00000004182	xrn2	99	69.782	Poecilia_formosa
ENSBTAG00000011304	XRN2	89	73.953	ENSPLAG00000007351	xrn2	96	73.953	Poecilia_latipinna
ENSBTAG00000011304	XRN2	100	67.465	ENSPMEG00000011798	xrn2	99	68.335	Poecilia_mexicana
ENSBTAG00000011304	XRN2	89	73.837	ENSPREG00000012452	xrn2	99	72.278	Poecilia_reticulata
ENSBTAG00000011304	XRN2	100	95.478	ENSPPYG00000010755	XRN2	100	95.478	Pongo_abelii
ENSBTAG00000011304	XRN2	100	89.507	ENSPCAG00000011191	XRN2	100	89.507	Procavia_capensis
ENSBTAG00000011304	XRN2	100	90.343	ENSPCOG00000016468	XRN2	100	90.343	Propithecus_coquereli
ENSBTAG00000011304	XRN2	93	92.121	ENSPVAG00000004596	XRN2	93	92.121	Pteropus_vampyrus
ENSBTAG00000011304	XRN2	90	73.210	ENSPNYG00000001765	xrn2	97	73.210	Pundamilia_nyererei
ENSBTAG00000011304	XRN2	100	70.438	ENSPNAG00000010956	xrn2	99	70.438	Pygocentrus_nattereri
ENSBTAG00000011304	XRN2	100	94.328	ENSRNOG00000011785	Xrn2	100	94.328	Rattus_norvegicus
ENSBTAG00000011304	XRN2	86	96.088	ENSRBIG00000036193	XRN2	100	96.088	Rhinopithecus_bieti
ENSBTAG00000011304	XRN2	100	96.004	ENSRROG00000044400	XRN2	90	96.004	Rhinopithecus_roxellana
ENSBTAG00000011304	XRN2	76	55.291	YOR048C	RAT1	79	53.365	Saccharomyces_cerevisiae
ENSBTAG00000011304	XRN2	100	95.689	ENSSBOG00000021014	XRN2	100	95.689	Saimiri_boliviensis_boliviensis
ENSBTAG00000011304	XRN2	100	71.311	ENSSFOG00015001091	xrn2	100	71.311	Scleropages_formosus
ENSBTAG00000011304	XRN2	92	72.830	ENSSMAG00000007834	xrn2	100	68.522	Scophthalmus_maximus
ENSBTAG00000011304	XRN2	92	71.171	ENSSDUG00000012802	xrn2	99	71.509	Seriola_dumerili
ENSBTAG00000011304	XRN2	93	73.251	ENSSLDG00000021273	xrn2	100	73.251	Seriola_lalandi_dorsalis
ENSBTAG00000011304	XRN2	76	100.000	ENSSARG00000005859	-	76	100.000	Sorex_araneus
ENSBTAG00000011304	XRN2	98	79.274	ENSSPUG00000005485	XRN2	96	79.380	Sphenodon_punctatus
ENSBTAG00000011304	XRN2	100	70.010	ENSSPAG00000016027	xrn2	99	70.010	Stegastes_partitus
ENSBTAG00000011304	XRN2	100	95.268	ENSSSCG00000007109	XRN2	100	95.268	Sus_scrofa
ENSBTAG00000011304	XRN2	100	81.106	ENSTGUG00000007535	XRN2	100	81.524	Taeniopygia_guttata
ENSBTAG00000011304	XRN2	100	67.810	ENSTRUG00000015489	xrn2	100	68.182	Takifugu_rubripes
ENSBTAG00000011304	XRN2	100	70.643	ENSTNIG00000010712	xrn2	100	70.643	Tetraodon_nigroviridis
ENSBTAG00000011304	XRN2	100	95.478	ENSTBEG00000004119	XRN2	100	95.478	Tupaia_belangeri
ENSBTAG00000011304	XRN2	93	97.477	ENSTTRG00000009087	XRN2	93	97.477	Tursiops_truncatus
ENSBTAG00000011304	XRN2	100	96.425	ENSUAMG00000024634	XRN2	100	96.425	Ursus_americanus
ENSBTAG00000011304	XRN2	100	95.987	ENSUMAG00000004012	XRN2	95	96.112	Ursus_maritimus
ENSBTAG00000011304	XRN2	94	88.771	ENSVPAG00000010694	XRN2	91	88.771	Vicugna_pacos
ENSBTAG00000011304	XRN2	100	96.530	ENSVVUG00000012178	XRN2	100	96.530	Vulpes_vulpes
ENSBTAG00000011304	XRN2	100	74.244	ENSXETG00000023501	xrn2	100	74.870	Xenopus_tropicalis
ENSBTAG00000011304	XRN2	100	68.140	ENSXMAG00000000242	xrn2	92	79.319	Xiphophorus_maculatus