EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000011846 (Gene tree)
Gene ID: 616339
Gene Symbol: TUT1
Alias: RBM21
Full Name: Bos taurus terminal uridylyl transferase 1%2C U6 snRNA-specific (TUT1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 9414 bases
Position: chr29:40927672-40937085
Accession: NM_001080322
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000071207	zf-met	PF12874.7	0.00015	1	1
ENSBTAP00000015724	zf-met	PF12874.7	0.00017	1	1
ENSBTAP00000071207	PAP_assoc	PF03828.19	7.8e-06	1	1
ENSBTAP00000015724	PAP_assoc	PF03828.19	8.1e-06	1	1
ENSBTAP00000071207	RRM_1	PF00076.22	9.3e-06	1	1
ENSBTAP00000015724	RRM_1	PF00076.22	9.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000080471	-	2580	-	ENSBTAP00000071207	859 (aa)	-	-
ENSBTAT00000015724	-	2694	-	ENSBTAP00000015724	871 (aa)	-	F1MG03

Gene Model

Click here to download ENSBTAG00000011846's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000011846's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000011846	TUT1	52	33.818	ENSBTAG00000004387	MTPAP	78	33.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000011846	TUT1	99	87.743	ENSG00000149016	TUT1	100	94.667	Homo_sapiens
ENSBTAG00000011846	TUT1	94	48.000	ENSAPOG00000016423	tut1	75	46.512	Acanthochromis_polyacanthus
ENSBTAG00000011846	TUT1	100	88.101	ENSAMEG00000006723	-	100	88.444	Ailuropoda_melanoleuca
ENSBTAG00000011846	TUT1	90	49.776	ENSACIG00000000948	tut1	65	48.357	Amphilophus_citrinellus
ENSBTAG00000011846	TUT1	94	47.982	ENSAOCG00000021912	tut1	99	46.479	Amphiprion_ocellaris
ENSBTAG00000011846	TUT1	94	47.982	ENSAPEG00000005144	tut1	99	46.479	Amphiprion_percula
ENSBTAG00000011846	TUT1	80	46.429	ENSATEG00000014590	tut1	75	44.860	Anabas_testudineus
ENSBTAG00000011846	TUT1	99	87.400	ENSANAG00000029063	-	99	87.400	Aotus_nancymaae
ENSBTAG00000011846	TUT1	86	48.416	ENSACLG00000013406	tut1	92	46.479	Astatotilapia_calliptera
ENSBTAG00000011846	TUT1	68	49.097	ENSAMXG00000042139	tut1	62	49.097	Astyanax_mexicanus
ENSBTAG00000011846	TUT1	99	87.514	ENSCJAG00000033294	-	99	87.514	Callithrix_jacchus
ENSBTAG00000011846	TUT1	100	86.187	ENSCAFG00000015822	TUT1	100	86.758	Canis_familiaris
ENSBTAG00000011846	TUT1	100	86.187	ENSCAFG00020013039	-	100	86.758	Canis_lupus_dingo
ENSBTAG00000011846	TUT1	100	97.130	ENSCHIG00000006765	-	100	97.130	Capra_hircus
ENSBTAG00000011846	TUT1	100	83.162	ENSTSYG00000000147	-	96	83.162	Carlito_syrichta
ENSBTAG00000011846	TUT1	79	79.480	ENSCAPG00000013001	-	99	78.902	Cavia_aperea
ENSBTAG00000011846	TUT1	100	74.686	ENSCPOG00000014281	-	99	74.230	Cavia_porcellus
ENSBTAG00000011846	TUT1	99	88.660	ENSCCAG00000018819	-	96	88.660	Cebus_capucinus
ENSBTAG00000011846	TUT1	99	88.545	ENSCATG00000036770	-	96	88.545	Cercocebus_atys
ENSBTAG00000011846	TUT1	100	74.142	ENSCLAG00000000215	-	99	73.227	Chinchilla_lanigera
ENSBTAG00000011846	TUT1	90	88.437	ENSCSAG00000006566	-	99	88.437	Chlorocebus_sabaeus
ENSBTAG00000011846	TUT1	74	82.367	ENSCHOG00000007746	-	72	82.367	Choloepus_hoffmanni
ENSBTAG00000011846	TUT1	89	56.809	ENSCPBG00000017909	-	90	60.465	Chrysemys_picta_bellii
ENSBTAG00000011846	TUT1	99	88.027	ENSCANG00000043244	-	96	88.027	Colobus_angolensis_palliatus
ENSBTAG00000011846	TUT1	100	76.424	ENSCGRG00001017583	Tut1	100	76.424	Cricetulus_griseus_chok1gshd
ENSBTAG00000011846	TUT1	100	76.424	ENSCGRG00000015008	Tut1	100	76.424	Cricetulus_griseus_crigri
ENSBTAG00000011846	TUT1	72	46.188	ENSCSEG00000012807	tut1	70	44.601	Cynoglossus_semilaevis
ENSBTAG00000011846	TUT1	83	46.862	ENSCVAG00000005396	tut1	70	46.575	Cyprinodon_variegatus
ENSBTAG00000011846	TUT1	88	48.305	ENSDARG00000057321	tut1	65	48.131	Danio_rerio
ENSBTAG00000011846	TUT1	100	86.041	ENSDNOG00000038908	-	100	86.842	Dasypus_novemcinctus
ENSBTAG00000011846	TUT1	100	84.000	ENSDORG00000004018	Tut1	98	83.886	Dipodomys_ordii
ENSBTAG00000011846	TUT1	73	41.213	ENSEBUG00000014170	tut1	69	41.213	Eptatretus_burgeri
ENSBTAG00000011846	TUT1	100	90.160	ENSEASG00005007531	-	100	90.160	Equus_asinus_asinus
ENSBTAG00000011846	TUT1	100	90.160	ENSECAG00000009471	-	98	90.160	Equus_caballus
ENSBTAG00000011846	TUT1	99	82.110	ENSEEUG00000001238	-	99	82.110	Erinaceus_europaeus
ENSBTAG00000011846	TUT1	70	49.097	ENSELUG00000011532	tut1	62	49.097	Esox_lucius
ENSBTAG00000011846	TUT1	100	88.457	ENSFCAG00000008859	-	96	88.343	Felis_catus
ENSBTAG00000011846	TUT1	99	66.590	ENSFDAG00000021131	-	99	75.417	Fukomys_damarensis
ENSBTAG00000011846	TUT1	93	47.639	ENSFHEG00000006279	tut1	98	47.418	Fundulus_heteroclitus
ENSBTAG00000011846	TUT1	81	41.612	ENSGMOG00000013378	tut1	62	52.963	Gadus_morhua
ENSBTAG00000011846	TUT1	89	46.226	ENSGACG00000009956	tut1	74	46.226	Gasterosteus_aculeatus
ENSBTAG00000011846	TUT1	85	49.383	ENSGAGG00000007912	-	77	49.383	Gopherus_agassizii
ENSBTAG00000011846	TUT1	99	87.629	ENSGGOG00000013564	-	96	87.629	Gorilla_gorilla
ENSBTAG00000011846	TUT1	86	47.368	ENSHBUG00000022855	tut1	92	45.455	Haplochromis_burtoni
ENSBTAG00000011846	TUT1	100	73.858	ENSHGLG00000002742	-	99	74.800	Heterocephalus_glaber_female
ENSBTAG00000011846	TUT1	100	73.379	ENSHGLG00100017588	-	99	74.432	Heterocephalus_glaber_male
ENSBTAG00000011846	TUT1	68	41.639	ENSHCOG00000016358	tut1	68	41.639	Hippocampus_comes
ENSBTAG00000011846	TUT1	57	50.327	ENSIPUG00000017671	tut1	66	50.327	Ictalurus_punctatus
ENSBTAG00000011846	TUT1	99	85.829	ENSSTOG00000002859	-	100	85.829	Ictidomys_tridecemlineatus
ENSBTAG00000011846	TUT1	100	82.971	ENSJJAG00000022329	Tut1	100	82.971	Jaculus_jaculus
ENSBTAG00000011846	TUT1	92	46.637	ENSKMAG00000010023	tut1	75	45.070	Kryptolebias_marmoratus
ENSBTAG00000011846	TUT1	84	44.144	ENSLBEG00000014969	tut1	76	43.396	Labrus_bergylta
ENSBTAG00000011846	TUT1	80	45.819	ENSLACG00000011278	tut1	68	49.765	Latimeria_chalumnae
ENSBTAG00000011846	TUT1	88	50.638	ENSLOCG00000013105	tut1	93	50.463	Lepisosteus_oculatus
ENSBTAG00000011846	TUT1	100	87.757	ENSLAFG00000003340	-	100	87.529	Loxodonta_africana
ENSBTAG00000011846	TUT1	99	88.316	ENSMFAG00000000912	-	96	88.316	Macaca_fascicularis
ENSBTAG00000011846	TUT1	99	88.087	ENSMMUG00000006595	-	100	93.333	Macaca_mulatta
ENSBTAG00000011846	TUT1	99	88.202	ENSMNEG00000029841	-	96	88.202	Macaca_nemestrina
ENSBTAG00000011846	TUT1	99	88.431	ENSMLEG00000040498	-	96	88.431	Mandrillus_leucophaeus
ENSBTAG00000011846	TUT1	92	47.368	ENSMAMG00000008173	tut1	75	45.872	Mastacembelus_armatus
ENSBTAG00000011846	TUT1	86	48.416	ENSMZEG00005009777	tut1	92	46.479	Maylandia_zebra
ENSBTAG00000011846	TUT1	90	82.278	ENSMAUG00000012453	Tut1	100	82.278	Mesocricetus_auratus
ENSBTAG00000011846	TUT1	99	87.041	ENSMICG00000009841	-	96	87.041	Microcebus_murinus
ENSBTAG00000011846	TUT1	100	77.107	ENSMOCG00000015834	Tut1	100	77.107	Microtus_ochrogaster
ENSBTAG00000011846	TUT1	75	47.807	ENSMMOG00000002589	tut1	67	46.330	Mola_mola
ENSBTAG00000011846	TUT1	99	68.607	ENSMODG00000007710	-	99	67.237	Monodelphis_domestica
ENSBTAG00000011846	TUT1	94	48.908	ENSMALG00000003624	tut1	68	47.489	Monopterus_albus
ENSBTAG00000011846	TUT1	100	75.371	MGP_CAROLIEiJ_G0022670	Tut1	100	75.485	Mus_caroli
ENSBTAG00000011846	TUT1	100	76.364	ENSMUSG00000071645	Tut1	100	76.364	Mus_musculus
ENSBTAG00000011846	TUT1	100	77.335	MGP_PahariEiJ_G0014164	Tut1	100	77.335	Mus_pahari
ENSBTAG00000011846	TUT1	100	76.023	MGP_SPRETEiJ_G0023583	Tut1	100	76.023	Mus_spretus
ENSBTAG00000011846	TUT1	100	87.529	ENSMPUG00000013938	-	100	87.643	Mustela_putorius_furo
ENSBTAG00000011846	TUT1	100	74.424	ENSMLUG00000000349	-	100	74.424	Myotis_lucifugus
ENSBTAG00000011846	TUT1	100	81.797	ENSNGAG00000002988	Tut1	100	81.797	Nannospalax_galili
ENSBTAG00000011846	TUT1	89	48.246	ENSNBRG00000022055	tut1	96	46.364	Neolamprologus_brichardi
ENSBTAG00000011846	TUT1	99	87.743	ENSNLEG00000003780	-	96	87.743	Nomascus_leucogenys
ENSBTAG00000011846	TUT1	92	78.487	ENSMEUG00000012756	-	91	78.487	Notamacropus_eugenii
ENSBTAG00000011846	TUT1	67	89.655	ENSOPRG00000011835	-	74	89.655	Ochotona_princeps
ENSBTAG00000011846	TUT1	99	71.871	ENSODEG00000002204	-	100	71.642	Octodon_degus
ENSBTAG00000011846	TUT1	94	49.545	ENSONIG00000019913	tut1	99	47.642	Oreochromis_niloticus
ENSBTAG00000011846	TUT1	56	72.597	ENSOANG00000012458	-	97	72.597	Ornithorhynchus_anatinus
ENSBTAG00000011846	TUT1	99	83.982	ENSOCUG00000017215	-	99	83.982	Oryctolagus_cuniculus
ENSBTAG00000011846	TUT1	94	46.606	ENSOMEG00000005129	tut1	77	44.601	Oryzias_melastigma
ENSBTAG00000011846	TUT1	100	85.927	ENSOGAG00000000828	-	100	85.812	Otolemur_garnettii
ENSBTAG00000011846	TUT1	100	93.190	ENSOARG00000015269	-	100	93.190	Ovis_aries
ENSBTAG00000011846	TUT1	99	88.087	ENSPPAG00000037200	-	96	88.087	Pan_paniscus
ENSBTAG00000011846	TUT1	100	88.457	ENSPPRG00000000257	-	100	88.343	Panthera_pardus
ENSBTAG00000011846	TUT1	100	88.571	ENSPTIG00000017573	-	96	88.457	Panthera_tigris_altaica
ENSBTAG00000011846	TUT1	99	87.858	ENSPTRG00000003770	TUT1	96	87.858	Pan_troglodytes
ENSBTAG00000011846	TUT1	90	85.459	ENSPANG00000010908	-	92	85.806	Papio_anubis
ENSBTAG00000011846	TUT1	88	48.291	ENSPKIG00000022062	tut1	61	48.601	Paramormyrops_kingsleyae
ENSBTAG00000011846	TUT1	91	50.528	ENSPSIG00000004972	-	76	50.452	Pelodiscus_sinensis
ENSBTAG00000011846	TUT1	76	47.059	ENSPMGG00000004299	tut1	78	45.062	Periophthalmus_magnuspinnatus
ENSBTAG00000011846	TUT1	100	76.993	ENSPEMG00000018332	Tut1	100	76.993	Peromyscus_maniculatus_bairdii
ENSBTAG00000011846	TUT1	79	45.926	ENSPMAG00000005825	tut1	60	48.355	Petromyzon_marinus
ENSBTAG00000011846	TUT1	100	66.818	ENSPCIG00000017805	-	99	65.350	Phascolarctos_cinereus
ENSBTAG00000011846	TUT1	73	46.606	ENSPFOG00000016195	tut1	99	44.601	Poecilia_formosa
ENSBTAG00000011846	TUT1	73	46.606	ENSPLAG00000022064	tut1	99	44.601	Poecilia_latipinna
ENSBTAG00000011846	TUT1	73	46.818	ENSPMEG00000019175	tut1	98	44.811	Poecilia_mexicana
ENSBTAG00000011846	TUT1	94	47.059	ENSPREG00000020464	tut1	99	45.070	Poecilia_reticulata
ENSBTAG00000011846	TUT1	99	87.959	ENSPPYG00000003162	-	99	87.959	Pongo_abelii
ENSBTAG00000011846	TUT1	97	84.888	ENSPCAG00000002956	-	100	84.770	Procavia_capensis
ENSBTAG00000011846	TUT1	99	86.152	ENSPCOG00000017464	-	97	86.152	Propithecus_coquereli
ENSBTAG00000011846	TUT1	85	87.169	ENSPVAG00000003444	-	85	87.169	Pteropus_vampyrus
ENSBTAG00000011846	TUT1	89	46.930	ENSPNYG00000018764	tut1	96	45.000	Pundamilia_nyererei
ENSBTAG00000011846	TUT1	88	51.142	ENSPNAG00000011889	tut1	63	49.763	Pygocentrus_nattereri
ENSBTAG00000011846	TUT1	100	77.221	ENSRNOG00000020047	Tut1	100	77.221	Rattus_norvegicus
ENSBTAG00000011846	TUT1	99	88.027	ENSRBIG00000021240	-	96	88.027	Rhinopithecus_bieti
ENSBTAG00000011846	TUT1	99	88.027	ENSRROG00000043315	-	99	88.027	Rhinopithecus_roxellana
ENSBTAG00000011846	TUT1	99	87.858	ENSSBOG00000003827	-	99	87.858	Saimiri_boliviensis_boliviensis
ENSBTAG00000011846	TUT1	97	67.213	ENSSHAG00000003368	-	99	66.120	Sarcophilus_harrisii
ENSBTAG00000011846	TUT1	87	51.570	ENSSFOG00015005639	tut1	93	50.235	Scleropages_formosus
ENSBTAG00000011846	TUT1	72	46.087	ENSSMAG00000011449	tut1	92	44.545	Scophthalmus_maximus
ENSBTAG00000011846	TUT1	89	47.196	ENSSDUG00000003613	tut1	96	47.196	Seriola_dumerili
ENSBTAG00000011846	TUT1	89	47.196	ENSSLDG00000022487	tut1	66	47.196	Seriola_lalandi_dorsalis
ENSBTAG00000011846	TUT1	86	54.626	ENSSPUG00000008143	-	90	53.704	Sphenodon_punctatus
ENSBTAG00000011846	TUT1	94	48.869	ENSSPAG00000023390	tut1	99	46.948	Stegastes_partitus
ENSBTAG00000011846	TUT1	86	89.572	ENSSSCG00000013063	-	100	89.747	Sus_scrofa
ENSBTAG00000011846	TUT1	91	43.966	ENSTRUG00000016451	tut1	75	43.396	Takifugu_rubripes
ENSBTAG00000011846	TUT1	72	42.254	ENSTNIG00000012852	tut1	99	41.471	Tetraodon_nigroviridis
ENSBTAG00000011846	TUT1	100	86.728	ENSTTRG00000002460	-	100	86.156	Tursiops_truncatus
ENSBTAG00000011846	TUT1	100	87.986	ENSUAMG00000027237	-	100	88.215	Ursus_americanus
ENSBTAG00000011846	TUT1	100	87.986	ENSUMAG00000012710	-	100	88.215	Ursus_maritimus
ENSBTAG00000011846	TUT1	77	88.856	ENSVPAG00000005413	-	100	88.856	Vicugna_pacos
ENSBTAG00000011846	TUT1	100	86.301	ENSVVUG00000029882	-	100	86.872	Vulpes_vulpes
ENSBTAG00000011846	TUT1	87	49.048	ENSXETG00000005640	tut1	87	49.048	Xenopus_tropicalis
ENSBTAG00000011846	TUT1	52	39.749	ENSXCOG00000017824	tut1	78	59.504	Xiphophorus_couchianus
ENSBTAG00000011846	TUT1	73	47.511	ENSXMAG00000027272	tut1	99	45.540	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	ISS	Function
GO:0003730	mRNA 3'-UTR binding	-	ISS	Function
GO:0004652	polynucleotide adenylyltransferase activity	-	ISS	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005730	nucleolus	-	ISS	Component
GO:0005847	mRNA cleavage and polyadenylation specificity factor complex	-	ISS	Component
GO:0006378	mRNA polyadenylation	-	ISS	Process
GO:0016180	snRNA processing	-	ISS	Process
GO:0016607	nuclear speck	-	ISS	Component
GO:0046872	metal ion binding	-	IEA	Function
GO:0050265	RNA uridylyltransferase activity	-	ISS	Function
GO:0071044	histone mRNA catabolic process	-	ISS	Process
GO:0098789	pre-mRNA cleavage required for polyadenylation	-	ISS	Process