EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000011922 (Gene tree)
Gene ID: 786966
Gene Symbol: PLEC
Alias: -
Full Name: plectin
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 56676 bases
Position: chr14:839972-896647
Accession: 53873
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000015828	S10_plectin	PF03501.15	5.3e-36	1	1
ENSBTAP00000065466	S10_plectin	PF03501.15	5.4e-36	1	1
ENSBTAP00000074548	S10_plectin	PF03501.15	5.4e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000075231	-	15109	-	ENSBTAP00000064542	4597 (aa)	-	-
ENSBTAT00000078854	-	15320	XM_025001910	ENSBTAP00000063950	4538 (aa)	XP_024857678	UPI000D53B1B7
ENSBTAT00000076728	-	15309	-	ENSBTAP00000065695	4548 (aa)	-	-
ENSBTAT00000086342	-	14723	XM_025001912	ENSBTAP00000061946	4516 (aa)	XP_024857680	UPI000D531A4E
ENSBTAT00000078025	-	15002	-	ENSBTAP00000059639	4558 (aa)	-	-
ENSBTAT00000076063	-	14976	-	ENSBTAP00000074252	4535 (aa)	-	-
ENSBTAT00000083372	-	14790	-	ENSBTAP00000071923	4558 (aa)	-	-
ENSBTAT00000015828	-	15846	XM_025001905	ENSBTAP00000015828	4671 (aa)	XP_024857673	E1BF59
ENSBTAT00000087039	-	15933	-	ENSBTAP00000065466	4700 (aa)	-	-
ENSBTAT00000082561	-	15969	-	ENSBTAP00000074548	4712 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000011922's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000011922's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000011922	PLEC	100	92.493	ENSG00000178209	PLEC	100	100.000	Homo_sapiens
ENSBTAG00000011922	PLEC	100	90.237	ENSAMEG00000006191	PLEC	100	90.365	Ailuropoda_melanoleuca
ENSBTAG00000011922	PLEC	100	92.086	ENSANAG00000032431	PLEC	100	92.086	Aotus_nancymaae
ENSBTAG00000011922	PLEC	100	92.449	ENSCJAG00000021472	PLEC	100	92.449	Callithrix_jacchus
ENSBTAG00000011922	PLEC	100	92.219	ENSCAFG00000001433	PLEC	100	92.219	Canis_familiaris
ENSBTAG00000011922	PLEC	88	98.902	ENSCHIG00000022260	PLEC	99	98.902	Capra_hircus
ENSBTAG00000011922	PLEC	100	92.237	ENSTSYG00000033419	PLEC	100	92.109	Carlito_syrichta
ENSBTAG00000011922	PLEC	100	92.019	ENSCPOG00000007957	PLEC	100	92.019	Cavia_porcellus
ENSBTAG00000011922	PLEC	100	92.470	ENSCCAG00000031237	PLEC	100	92.470	Cebus_capucinus
ENSBTAG00000011922	PLEC	100	92.600	ENSCATG00000009349	PLEC	100	92.600	Cercocebus_atys
ENSBTAG00000011922	PLEC	100	92.467	ENSCLAG00000012830	PLEC	100	92.467	Chinchilla_lanigera
ENSBTAG00000011922	PLEC	100	75.037	ENSCPBG00000021974	PLEC	99	75.037	Chrysemys_picta_bellii
ENSBTAG00000011922	PLEC	100	92.477	ENSCGRG00001019864	Plec	100	92.477	Cricetulus_griseus_chok1gshd
ENSBTAG00000011922	PLEC	100	91.875	ENSCGRG00000002714	Plec	100	91.875	Cricetulus_griseus_crigri
ENSBTAG00000011922	PLEC	96	91.382	ENSDNOG00000031742	PLEC	99	91.382	Dasypus_novemcinctus
ENSBTAG00000011922	PLEC	80	92.371	ENSETEG00000015535	-	62	92.371	Echinops_telfairi
ENSBTAG00000011922	PLEC	85	95.290	ENSEEUG00000004554	-	67	95.290	Erinaceus_europaeus
ENSBTAG00000011922	PLEC	100	92.808	ENSFCAG00000042897	PLEC	100	92.808	Felis_catus
ENSBTAG00000011922	PLEC	100	91.933	ENSFDAG00000011856	PLEC	100	91.933	Fukomys_damarensis
ENSBTAG00000011922	PLEC	100	87.908	ENSGGOG00000012217	PLEC	100	90.662	Gorilla_gorilla
ENSBTAG00000011922	PLEC	100	91.933	ENSHGLG00000012646	PLEC	100	91.933	Heterocephalus_glaber_female
ENSBTAG00000011922	PLEC	100	81.102	ENSHGLG00100011759	PLEC	100	81.375	Heterocephalus_glaber_male
ENSBTAG00000011922	PLEC	100	91.483	ENSSTOG00000023061	PLEC	100	91.441	Ictidomys_tridecemlineatus
ENSBTAG00000011922	PLEC	100	92.450	ENSJJAG00000012390	Plec	100	92.450	Jaculus_jaculus
ENSBTAG00000011922	PLEC	100	92.621	ENSMFAG00000032066	PLEC	100	92.621	Macaca_fascicularis
ENSBTAG00000011922	PLEC	100	89.145	ENSMMUG00000000388	PLEC	100	89.327	Macaca_mulatta
ENSBTAG00000011922	PLEC	100	92.578	ENSMNEG00000011406	PLEC	100	92.578	Macaca_nemestrina
ENSBTAG00000011922	PLEC	97	88.539	ENSMLEG00000033296	PLEC	100	91.643	Mandrillus_leucophaeus
ENSBTAG00000011922	PLEC	100	92.370	ENSMAUG00000001116	Plec	100	92.370	Mesocricetus_auratus
ENSBTAG00000011922	PLEC	100	92.304	ENSMICG00000016160	PLEC	100	92.304	Microcebus_murinus
ENSBTAG00000011922	PLEC	100	92.511	ENSMOCG00000000674	Plec	100	92.511	Microtus_ochrogaster
ENSBTAG00000011922	PLEC	100	92.554	MGP_CAROLIEiJ_G0019913	Plec	100	92.554	Mus_caroli
ENSBTAG00000011922	PLEC	100	92.533	ENSMUSG00000022565	Plec	100	92.533	Mus_musculus
ENSBTAG00000011922	PLEC	100	92.383	MGP_PahariEiJ_G0019923	Plec	100	92.383	Mus_pahari
ENSBTAG00000011922	PLEC	100	92.575	MGP_SPRETEiJ_G0020816	Plec	100	92.575	Mus_spretus
ENSBTAG00000011922	PLEC	100	90.952	ENSMPUG00000007329	PLEC	100	91.058	Mustela_putorius_furo
ENSBTAG00000011922	PLEC	100	92.703	ENSNGAG00000008931	Plec	100	92.703	Nannospalax_galili
ENSBTAG00000011922	PLEC	98	92.308	ENSMEUG00000004499	-	70	92.308	Notamacropus_eugenii
ENSBTAG00000011922	PLEC	91	91.476	ENSOPRG00000015206	PLEC	69	91.476	Ochotona_princeps
ENSBTAG00000011922	PLEC	93	84.174	ENSOARG00000015846	-	100	82.797	Ovis_aries
ENSBTAG00000011922	PLEC	100	83.220	ENSPPAG00000042112	PLEC	100	85.781	Pan_paniscus
ENSBTAG00000011922	PLEC	100	92.472	ENSPTRG00000020672	PLEC	100	92.472	Pan_troglodytes
ENSBTAG00000011922	PLEC	100	92.365	ENSPANG00000023403	-	100	92.365	Papio_anubis
ENSBTAG00000011922	PLEC	100	92.655	ENSPEMG00000011922	Plec	100	92.655	Peromyscus_maniculatus_bairdii
ENSBTAG00000011922	PLEC	99	82.916	ENSPCIG00000014981	PLEC	99	82.831	Phascolarctos_cinereus
ENSBTAG00000011922	PLEC	100	92.322	ENSPCOG00000023279	PLEC	100	92.322	Propithecus_coquereli
ENSBTAG00000011922	PLEC	100	93.001	ENSPVAG00000009376	PLEC	91	93.020	Pteropus_vampyrus
ENSBTAG00000011922	PLEC	100	92.662	ENSRNOG00000023781	Plec	100	92.662	Rattus_norvegicus
ENSBTAG00000011922	PLEC	100	84.246	ENSRBIG00000041068	PLEC	61	83.010	Rhinopithecus_bieti
ENSBTAG00000011922	PLEC	100	92.552	ENSRROG00000015881	PLEC	100	92.552	Rhinopithecus_roxellana
ENSBTAG00000011922	PLEC	100	90.062	ENSSBOG00000025259	PLEC	100	90.062	Saimiri_boliviensis_boliviensis
ENSBTAG00000011922	PLEC	99	77.307	ENSSHAG00000009020	PLEC	99	79.850	Sarcophilus_harrisii
ENSBTAG00000011922	PLEC	97	92.885	ENSTTRG00000010427	PLEC	95	92.857	Tursiops_truncatus
ENSBTAG00000011922	PLEC	100	92.006	ENSVVUG00000010214	PLEC	100	92.006	Vulpes_vulpes