EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000012101 (Gene tree)
Gene ID: 100337373
Gene Symbol: SYMPK
Alias: -
Full Name: Bos taurus symplekin (SYMPK)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 29535 bases
Position: chr18:53350775-53380309
Accession: NM_001206913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000016048	Symplekin_C	PF12295.8	4.5e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000016048	-	4217	-	ENSBTAP00000016048	1271 (aa)	-	E1BJF6

Gene Model

Click here to download ENSBTAG00000012101's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03015	mRNA surveillance pathway	KEGG
bta04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000012101's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000012101	SYMPK	100	96.468	ENSG00000125755	SYMPK	100	98.592	Homo_sapiens
ENSBTAG00000012101	SYMPK	86	74.064	ENSAPOG00000015934	sympk	97	73.969	Acanthochromis_polyacanthus
ENSBTAG00000012101	SYMPK	100	97.484	ENSAMEG00000000680	SYMPK	100	97.484	Ailuropoda_melanoleuca
ENSBTAG00000012101	SYMPK	85	75.092	ENSACIG00000006357	sympk	92	75.092	Amphilophus_citrinellus
ENSBTAG00000012101	SYMPK	85	75.276	ENSAOCG00000024124	sympk	92	75.000	Amphiprion_ocellaris
ENSBTAG00000012101	SYMPK	85	75.276	ENSAPEG00000003465	sympk	90	74.616	Amphiprion_percula
ENSBTAG00000012101	SYMPK	87	74.421	ENSATEG00000008472	sympk	90	75.068	Anabas_testudineus
ENSBTAG00000012101	SYMPK	90	78.583	ENSACAG00000004126	SYMPK	97	79.674	Anolis_carolinensis
ENSBTAG00000012101	SYMPK	100	97.013	ENSANAG00000021087	SYMPK	99	98.585	Aotus_nancymaae
ENSBTAG00000012101	SYMPK	88	74.268	ENSACLG00000001813	sympk	91	74.843	Astatotilapia_calliptera
ENSBTAG00000012101	SYMPK	89	72.498	ENSAMXG00000013677	sympk	91	74.041	Astyanax_mexicanus
ENSBTAG00000012101	SYMPK	100	93.947	ENSCJAG00000012172	SYMPK	99	96.519	Callithrix_jacchus
ENSBTAG00000012101	SYMPK	100	97.338	ENSCAFG00000004376	SYMPK	100	97.338	Canis_familiaris
ENSBTAG00000012101	SYMPK	100	97.338	ENSCAFG00020001815	SYMPK	100	97.338	Canis_lupus_dingo
ENSBTAG00000012101	SYMPK	100	99.371	ENSCHIG00000026784	SYMPK	100	99.371	Capra_hircus
ENSBTAG00000012101	SYMPK	100	96.169	ENSTSYG00000006268	SYMPK	99	96.169	Carlito_syrichta
ENSBTAG00000012101	SYMPK	84	95.122	ENSCAPG00000005112	SYMPK	96	95.122	Cavia_aperea
ENSBTAG00000012101	SYMPK	100	91.335	ENSCPOG00000010434	SYMPK	92	97.483	Cavia_porcellus
ENSBTAG00000012101	SYMPK	100	97.170	ENSCCAG00000036309	SYMPK	99	98.690	Cebus_capucinus
ENSBTAG00000012101	SYMPK	100	96.703	ENSCATG00000045107	SYMPK	99	98.408	Cercocebus_atys
ENSBTAG00000012101	SYMPK	100	95.837	ENSCLAG00000001206	SYMPK	100	95.601	Chinchilla_lanigera
ENSBTAG00000012101	SYMPK	100	96.703	ENSCSAG00000003115	SYMPK	100	96.703	Chlorocebus_sabaeus
ENSBTAG00000012101	SYMPK	69	100.000	ENSCHOG00000012456	SYMPK	81	100.000	Choloepus_hoffmanni
ENSBTAG00000012101	SYMPK	100	81.496	ENSCPBG00000007170	SYMPK	98	83.708	Chrysemys_picta_bellii
ENSBTAG00000012101	SYMPK	83	49.341	ENSCING00000021232	-	96	49.341	Ciona_intestinalis
ENSBTAG00000012101	SYMPK	81	48.169	ENSCSAVG00000005154	-	100	48.357	Ciona_savignyi
ENSBTAG00000012101	SYMPK	100	94.310	ENSCANG00000040907	SYMPK	100	94.310	Colobus_angolensis_palliatus
ENSBTAG00000012101	SYMPK	92	90.754	ENSCGRG00001010086	Sympk	100	90.608	Cricetulus_griseus_chok1gshd
ENSBTAG00000012101	SYMPK	87	74.150	ENSCSEG00000016802	sympk	91	74.170	Cynoglossus_semilaevis
ENSBTAG00000012101	SYMPK	88	72.056	ENSDARG00000059553	sympk	88	73.636	Danio_rerio
ENSBTAG00000012101	SYMPK	99	95.415	ENSDNOG00000016149	SYMPK	98	94.783	Dasypus_novemcinctus
ENSBTAG00000012101	SYMPK	86	36.776	FBgn0037371	Sym	95	36.598	Drosophila_melanogaster
ENSBTAG00000012101	SYMPK	50	95.860	ENSETEG00000015995	-	54	95.860	Echinops_telfairi
ENSBTAG00000012101	SYMPK	72	58.980	ENSEBUG00000000387	sympk	89	62.327	Eptatretus_burgeri
ENSBTAG00000012101	SYMPK	100	97.565	ENSEASG00005014227	SYMPK	100	97.565	Equus_asinus_asinus
ENSBTAG00000012101	SYMPK	100	97.565	ENSECAG00000008163	SYMPK	100	97.565	Equus_caballus
ENSBTAG00000012101	SYMPK	69	94.667	ENSEEUG00000000270	-	81	94.667	Erinaceus_europaeus
ENSBTAG00000012101	SYMPK	87	75.247	ENSELUG00000000850	sympk	88	75.157	Esox_lucius
ENSBTAG00000012101	SYMPK	100	97.707	ENSFCAG00000007337	SYMPK	100	97.645	Felis_catus
ENSBTAG00000012101	SYMPK	100	95.365	ENSFDAG00000011272	SYMPK	100	95.051	Fukomys_damarensis
ENSBTAG00000012101	SYMPK	86	75.205	ENSFHEG00000010274	sympk	90	74.932	Fundulus_heteroclitus
ENSBTAG00000012101	SYMPK	85	73.241	ENSGMOG00000002357	sympk	99	73.241	Gadus_morhua
ENSBTAG00000012101	SYMPK	87	75.068	ENSGAFG00000010976	sympk	90	74.977	Gambusia_affinis
ENSBTAG00000012101	SYMPK	88	73.104	ENSGACG00000002735	sympk	98	74.954	Gasterosteus_aculeatus
ENSBTAG00000012101	SYMPK	67	77.153	ENSGAGG00000012538	-	88	84.885	Gopherus_agassizii
ENSBTAG00000012101	SYMPK	100	96.703	ENSGGOG00000003410	SYMPK	97	97.848	Gorilla_gorilla
ENSBTAG00000012101	SYMPK	88	74.445	ENSHBUG00000023564	sympk	91	75.022	Haplochromis_burtoni
ENSBTAG00000012101	SYMPK	100	91.045	ENSHGLG00000005228	SYMPK	100	91.045	Heterocephalus_glaber_female
ENSBTAG00000012101	SYMPK	100	90.987	ENSHGLG00100018571	SYMPK	100	90.752	Heterocephalus_glaber_male
ENSBTAG00000012101	SYMPK	85	70.486	ENSHCOG00000017400	sympk	91	70.496	Hippocampus_comes
ENSBTAG00000012101	SYMPK	87	73.807	ENSIPUG00000024020	SYMPK	90	73.746	Ictalurus_punctatus
ENSBTAG00000012101	SYMPK	100	96.777	ENSSTOG00000001534	SYMPK	100	96.777	Ictidomys_tridecemlineatus
ENSBTAG00000012101	SYMPK	100	94.440	ENSJJAG00000006633	Sympk	100	94.205	Jaculus_jaculus
ENSBTAG00000012101	SYMPK	86	75.046	ENSKMAG00000016292	sympk	90	75.114	Kryptolebias_marmoratus
ENSBTAG00000012101	SYMPK	86	74.932	ENSLBEG00000027913	sympk	96	71.204	Labrus_bergylta
ENSBTAG00000012101	SYMPK	95	71.816	ENSLACG00000016497	SYMPK	100	71.793	Latimeria_chalumnae
ENSBTAG00000012101	SYMPK	100	96.627	ENSLAFG00000008726	SYMPK	100	96.627	Loxodonta_africana
ENSBTAG00000012101	SYMPK	100	96.703	ENSMMUG00000015428	SYMPK	100	96.703	Macaca_mulatta
ENSBTAG00000012101	SYMPK	100	96.625	ENSMNEG00000019439	SYMPK	99	98.315	Macaca_nemestrina
ENSBTAG00000012101	SYMPK	100	96.625	ENSMLEG00000040508	SYMPK	99	98.408	Mandrillus_leucophaeus
ENSBTAG00000012101	SYMPK	87	74.368	ENSMAMG00000010486	sympk	89	75.023	Mastacembelus_armatus
ENSBTAG00000012101	SYMPK	88	74.268	ENSMZEG00005014146	sympk	91	74.843	Maylandia_zebra
ENSBTAG00000012101	SYMPK	100	91.947	ENSMAUG00000015657	Sympk	100	91.308	Mesocricetus_auratus
ENSBTAG00000012101	SYMPK	100	96.784	ENSMICG00000001871	SYMPK	100	96.784	Microcebus_murinus
ENSBTAG00000012101	SYMPK	100	93.063	ENSMOCG00000008388	Sympk	100	92.829	Microtus_ochrogaster
ENSBTAG00000012101	SYMPK	87	72.442	ENSMMOG00000019227	sympk	94	72.983	Mola_mola
ENSBTAG00000012101	SYMPK	97	89.196	ENSMODG00000021534	SYMPK	96	89.115	Monodelphis_domestica
ENSBTAG00000012101	SYMPK	73	69.681	ENSMALG00000008347	sympk	96	70.000	Monopterus_albus
ENSBTAG00000012101	SYMPK	100	93.219	MGP_CAROLIEiJ_G0029267	Sympk	100	92.985	Mus_caroli
ENSBTAG00000012101	SYMPK	100	92.486	ENSMUSG00000023118	Sympk	100	92.254	Mus_musculus
ENSBTAG00000012101	SYMPK	100	93.432	MGP_PahariEiJ_G0021127	Sympk	100	93.120	Mus_pahari
ENSBTAG00000012101	SYMPK	100	93.058	MGP_SPRETEiJ_G0030351	-	100	92.746	Mus_spretus
ENSBTAG00000012101	SYMPK	100	95.611	ENSMPUG00000005505	SYMPK	100	95.611	Mustela_putorius_furo
ENSBTAG00000012101	SYMPK	79	92.829	ENSMLUG00000001359	SYMPK	100	92.430	Myotis_lucifugus
ENSBTAG00000012101	SYMPK	100	94.597	ENSNGAG00000000820	Sympk	100	94.205	Nannospalax_galili
ENSBTAG00000012101	SYMPK	86	73.827	ENSNBRG00000018101	sympk	92	75.630	Neolamprologus_brichardi
ENSBTAG00000012101	SYMPK	100	83.177	ENSNLEG00000002369	SYMPK	100	83.020	Nomascus_leucogenys
ENSBTAG00000012101	SYMPK	80	89.474	ENSMEUG00000003866	SYMPK	82	89.474	Notamacropus_eugenii
ENSBTAG00000012101	SYMPK	100	92.958	ENSOPRG00000009967	SYMPK	100	92.645	Ochotona_princeps
ENSBTAG00000012101	SYMPK	99	95.755	ENSODEG00000007519	SYMPK	99	95.755	Octodon_degus
ENSBTAG00000012101	SYMPK	87	74.087	ENSONIG00000016802	sympk	96	74.662	Oreochromis_niloticus
ENSBTAG00000012101	SYMPK	76	96.995	ENSOCUG00000005511	SYMPK	90	96.995	Oryctolagus_cuniculus
ENSBTAG00000012101	SYMPK	86	75.159	ENSORLG00000015338	sympk	96	74.340	Oryzias_latipes
ENSBTAG00000012101	SYMPK	86	75.068	ENSORLG00020004402	sympk	90	75.735	Oryzias_latipes_hni
ENSBTAG00000012101	SYMPK	86	75.159	ENSORLG00015005712	sympk	90	75.827	Oryzias_latipes_hsok
ENSBTAG00000012101	SYMPK	85	75.346	ENSOMEG00000022561	sympk	90	75.346	Oryzias_melastigma
ENSBTAG00000012101	SYMPK	100	96.782	ENSOGAG00000013483	SYMPK	100	96.782	Otolemur_garnettii
ENSBTAG00000012101	SYMPK	100	93.672	ENSOARG00000010349	SYMPK	100	93.672	Ovis_aries
ENSBTAG00000012101	SYMPK	100	96.546	ENSPPAG00000043204	SYMPK	100	96.546	Pan_paniscus
ENSBTAG00000012101	SYMPK	100	97.645	ENSPPRG00000004282	SYMPK	100	97.645	Panthera_pardus
ENSBTAG00000012101	SYMPK	100	95.287	ENSPTIG00000015420	SYMPK	100	94.973	Panthera_tigris_altaica
ENSBTAG00000012101	SYMPK	100	96.546	ENSPTRG00000011169	SYMPK	100	96.546	Pan_troglodytes
ENSBTAG00000012101	SYMPK	100	96.703	ENSPANG00000019930	SYMPK	99	98.408	Papio_anubis
ENSBTAG00000012101	SYMPK	87	75.961	ENSPKIG00000017132	sympk	96	72.564	Paramormyrops_kingsleyae
ENSBTAG00000012101	SYMPK	100	93.604	ENSPEMG00000007564	Sympk	100	93.058	Peromyscus_maniculatus_bairdii
ENSBTAG00000012101	SYMPK	80	65.774	ENSPMAG00000004936	sympk	100	65.679	Petromyzon_marinus
ENSBTAG00000012101	SYMPK	98	88.492	ENSPCIG00000024476	SYMPK	99	86.600	Phascolarctos_cinereus
ENSBTAG00000012101	SYMPK	86	75.000	ENSPFOG00000001194	sympk	90	75.250	Poecilia_formosa
ENSBTAG00000012101	SYMPK	86	74.909	ENSPLAG00000012995	sympk	90	75.159	Poecilia_latipinna
ENSBTAG00000012101	SYMPK	86	74.909	ENSPMEG00000008099	sympk	90	75.159	Poecilia_mexicana
ENSBTAG00000012101	SYMPK	87	74.932	ENSPREG00000006176	sympk	90	75.159	Poecilia_reticulata
ENSBTAG00000012101	SYMPK	87	97.662	ENSPPYG00000010135	SYMPK	99	97.662	Pongo_abelii
ENSBTAG00000012101	SYMPK	94	90.738	ENSPCAG00000005182	SYMPK	94	90.738	Procavia_capensis
ENSBTAG00000012101	SYMPK	100	97.176	ENSPCOG00000023740	SYMPK	99	98.688	Propithecus_coquereli
ENSBTAG00000012101	SYMPK	97	96.123	ENSPVAG00000001355	SYMPK	100	96.123	Pteropus_vampyrus
ENSBTAG00000012101	SYMPK	88	74.357	ENSPNYG00000011455	sympk	90	74.933	Pundamilia_nyererei
ENSBTAG00000012101	SYMPK	89	73.542	ENSPNAG00000016505	sympk	89	74.910	Pygocentrus_nattereri
ENSBTAG00000012101	SYMPK	100	93.141	ENSRNOG00000014353	Sympk	100	92.673	Rattus_norvegicus
ENSBTAG00000012101	SYMPK	100	96.314	ENSRBIG00000040963	SYMPK	99	98.392	Rhinopithecus_bieti
ENSBTAG00000012101	SYMPK	100	96.703	ENSRROG00000024834	SYMPK	100	96.703	Rhinopithecus_roxellana
ENSBTAG00000012101	SYMPK	100	97.013	ENSSBOG00000034497	SYMPK	100	97.013	Saimiri_boliviensis_boliviensis
ENSBTAG00000012101	SYMPK	90	90.893	ENSSHAG00000003139	SYMPK	99	90.807	Sarcophilus_harrisii
ENSBTAG00000012101	SYMPK	87	76.004	ENSSFOG00015006974	sympk	90	76.004	Scleropages_formosus
ENSBTAG00000012101	SYMPK	86	74.433	ENSSMAG00000018130	sympk	72	74.499	Scophthalmus_maximus
ENSBTAG00000012101	SYMPK	87	74.260	ENSSDUG00000007092	sympk	90	74.414	Seriola_dumerili
ENSBTAG00000012101	SYMPK	87	74.260	ENSSLDG00000014774	sympk	96	71.967	Seriola_lalandi_dorsalis
ENSBTAG00000012101	SYMPK	61	100.000	ENSSARG00000004274	-	66	100.000	Sorex_araneus
ENSBTAG00000012101	SYMPK	96	83.549	ENSSPUG00000002789	SYMPK	96	82.021	Sphenodon_punctatus
ENSBTAG00000012101	SYMPK	85	75.691	ENSSPAG00000000854	sympk	90	74.955	Stegastes_partitus
ENSBTAG00000012101	SYMPK	100	98.035	ENSSSCG00000003093	SYMPK	100	98.035	Sus_scrofa
ENSBTAG00000012101	SYMPK	87	74.194	ENSTRUG00000010202	sympk	91	74.480	Takifugu_rubripes
ENSBTAG00000012101	SYMPK	85	74.495	ENSTNIG00000017855	sympk	98	73.514	Tetraodon_nigroviridis
ENSBTAG00000012101	SYMPK	88	94.156	ENSTBEG00000000454	SYMPK	88	94.156	Tupaia_belangeri
ENSBTAG00000012101	SYMPK	100	89.490	ENSTTRG00000014311	SYMPK	100	89.490	Tursiops_truncatus
ENSBTAG00000012101	SYMPK	100	95.287	ENSUAMG00000022272	SYMPK	100	94.510	Ursus_americanus
ENSBTAG00000012101	SYMPK	100	97.486	ENSUMAG00000023698	SYMPK	100	97.486	Ursus_maritimus
ENSBTAG00000012101	SYMPK	89	97.452	ENSVVUG00000003024	SYMPK	99	97.452	Vulpes_vulpes
ENSBTAG00000012101	SYMPK	90	72.743	ENSXETG00000024453	sympk	94	72.830	Xenopus_tropicalis
ENSBTAG00000012101	SYMPK	84	74.376	ENSXCOG00000015368	sympk	100	74.376	Xiphophorus_couchianus
ENSBTAG00000012101	SYMPK	86	75.181	ENSXMAG00000005737	sympk	90	75.159	Xiphophorus_maculatus