EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSBTAG00000012111 (Gene tree)
Gene ID
537500
Gene Symbol
PRDM5
Alias
-
Full Name
Bos taurus PR/SET domain 5 (PRDM5)%2C mRNA.
Gene Type
protein_coding
Species
Bos_taurus
Status
putative
Strand
Plus strand
Length
250679 bases
Position
chr6:4526911-4777589
Accession
NM_001192907
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSBTAP00000046605zf-C2H2PF00096.267.1e-66111
ENSBTAP00000046605zf-C2H2PF00096.267.1e-66211
ENSBTAP00000046605zf-C2H2PF00096.267.1e-66311
ENSBTAP00000046605zf-C2H2PF00096.267.1e-66411
ENSBTAP00000046605zf-C2H2PF00096.267.1e-66511
ENSBTAP00000046605zf-C2H2PF00096.267.1e-66611
ENSBTAP00000046605zf-C2H2PF00096.267.1e-66711
ENSBTAP00000046605zf-C2H2PF00096.267.1e-66811
ENSBTAP00000046605zf-C2H2PF00096.267.1e-66911
ENSBTAP00000046605zf-C2H2PF00096.267.1e-661011
ENSBTAP00000046605zf-C2H2PF00096.267.1e-661111
ENSBTAP00000046605zf-metPF12874.72.1e-2514
ENSBTAP00000046605zf-metPF12874.72.1e-2524
ENSBTAP00000046605zf-metPF12874.72.1e-2534
ENSBTAP00000046605zf-metPF12874.72.1e-2544
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSBTAT00000049757-1893-ENSBTAP00000046605630 (aa)-F1MFG2
Gene Model
Click here to download ENSBTAG00000012111's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000012111's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSBTAG00000012111PRDM57339.502ENSBTAG00000040358-10039.502
ENSBTAG00000012111PRDM57137.931ENSBTAG00000052323MAZ6134.272
ENSBTAG00000012111PRDM57536.364ENSBTAG00000049339-8836.364
ENSBTAG00000012111PRDM57231.897ENSBTAG00000012600GTF3A7631.489
ENSBTAG00000012111PRDM58440.067ENSBTAG00000054022ZNF2509140.067
ENSBTAG00000012111PRDM57443.750ENSBTAG00000016191ZNF328143.750
ENSBTAG00000012111PRDM59042.353ENSBTAG00000023797PRDM126942.353
ENSBTAG00000012111PRDM57341.004ENSBTAG00000000868ZFP16839.431
ENSBTAG00000012111PRDM55740.876ENSBTAG00000013227SNAI26040.876
ENSBTAG00000012111PRDM57940.678ENSBTAG00000032018ZNF197440.678
ENSBTAG00000012111PRDM59437.363ENSBTAG00000019001PRDM105737.363
ENSBTAG00000012111PRDM58140.881ENSBTAG00000049158ZNF5968640.881
ENSBTAG00000012111PRDM57241.304ENSBTAG00000045531-5044.118
ENSBTAG00000012111PRDM57338.874ENSBTAG00000007714ZNF2356638.874
ENSBTAG00000012111PRDM57440.833ENSBTAG00000014593-7540.833
ENSBTAG00000012111PRDM57433.611ENSBTAG00000002291ZBTB416032.864
ENSBTAG00000012111PRDM57437.637ENSBTAG00000038088-9937.637
ENSBTAG00000012111PRDM58444.512ENSBTAG00000050322-7144.512
ENSBTAG00000012111PRDM57731.319ENSBTAG00000017397ZNF4239831.319
ENSBTAG00000012111PRDM57438.696ENSBTAG00000050035ZNF2267638.696
ENSBTAG00000012111PRDM57437.410ENSBTAG00000016721-9937.410
ENSBTAG00000012111PRDM57335.731ENSBTAG00000008902ZNF3459135.731
ENSBTAG00000012111PRDM57240.964ENSBTAG00000050093-5340.964
ENSBTAG00000012111PRDM57946.729ENSBTAG00000017517ZNF2367746.729
ENSBTAG00000012111PRDM57341.304ENSBTAG00000043974-5445.588
ENSBTAG00000012111PRDM57331.070ENSBTAG00000045572ZNF3198732.381
ENSBTAG00000012111PRDM57339.009ENSBTAG00000040209ZNF1127939.009
ENSBTAG00000012111PRDM57630.180ENSBTAG00000040206ZNF77010042.254
ENSBTAG00000012111PRDM57439.474ENSBTAG00000017731ZFAT5039.474
ENSBTAG00000012111PRDM57230.385ENSBTAG00000020754ZNF5268130.385
ENSBTAG00000012111PRDM58339.474ENSBTAG00000016077ZNF3179539.474
ENSBTAG00000012111PRDM57338.742ENSBTAG00000030470-7038.742
ENSBTAG00000012111PRDM59735.294ENSBTAG00000000060PRDM145335.294
ENSBTAG00000012111PRDM57437.751ENSBTAG00000038869ZNF3837135.612
ENSBTAG00000012111PRDM58440.288ENSBTAG00000038322-9237.874
ENSBTAG00000012111PRDM57438.403ENSBTAG00000053591-9837.217
ENSBTAG00000012111PRDM57337.020ENSBTAG00000049610ZNF2349437.020
ENSBTAG00000012111PRDM57339.316ENSBTAG00000030348ZNF5826438.514
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSBTAG00000012111PRDM510096.190ENSG00000138738PRDM510096.190Homo_sapiens
ENSBTAG00000012111PRDM510076.070ENSAPOG00000023220prdm510076.070Acanthochromis_polyacanthus
ENSBTAG00000012111PRDM59191.667ENSAMEG00000003050PRDM510092.014Ailuropoda_melanoleuca
ENSBTAG00000012111PRDM510074.802ENSACIG00000000406prdm510074.802Amphilophus_citrinellus
ENSBTAG00000012111PRDM510076.545ENSAOCG00000014806prdm510076.545Amphiprion_ocellaris
ENSBTAG00000012111PRDM510067.945ENSAPEG00000016846prdm510069.018Amphiprion_percula
ENSBTAG00000012111PRDM510078.764ENSATEG00000013829prdm59978.922Anabas_testudineus
ENSBTAG00000012111PRDM59584.053ENSAPLG00000013828PRDM510084.053Anas_platyrhynchos
ENSBTAG00000012111PRDM510078.730ENSACAG00000012999PRDM510078.730Anolis_carolinensis
ENSBTAG00000012111PRDM510098.101ENSANAG00000027411PRDM510098.101Aotus_nancymaae
ENSBTAG00000012111PRDM510076.862ENSACLG00000017996prdm510076.862Astatotilapia_calliptera
ENSBTAG00000012111PRDM58577.095ENSAMXG00000041864prdm59977.840Astyanax_mexicanus
ENSBTAG00000012111PRDM510098.101ENSCJAG00000003133PRDM510098.101Callithrix_jacchus
ENSBTAG00000012111PRDM59285.172ENSCAFG00000004179PRDM510085.172Canis_familiaris
ENSBTAG00000012111PRDM510096.825ENSCAFG00020017685PRDM510096.825Canis_lupus_dingo
ENSBTAG00000012111PRDM510096.667ENSCHIG00000018772PRDM510096.667Capra_hircus
ENSBTAG00000012111PRDM59594.862ENSTSYG00000009630PRDM59594.862Carlito_syrichta
ENSBTAG00000012111PRDM59983.866ENSCAPG00000015217PRDM510096.667Cavia_aperea
ENSBTAG00000012111PRDM59597.785ENSCPOG00000012883PRDM510097.785Cavia_porcellus
ENSBTAG00000012111PRDM510098.418ENSCCAG00000023157PRDM510098.418Cebus_capucinus
ENSBTAG00000012111PRDM510098.734ENSCATG00000042510PRDM510098.734Cercocebus_atys
ENSBTAG00000012111PRDM59597.785ENSCLAG00000005392PRDM510097.785Chinchilla_lanigera
ENSBTAG00000012111PRDM510091.587ENSCSAG00000003729PRDM510091.587Chlorocebus_sabaeus
ENSBTAG00000012111PRDM59991.600ENSCHOG00000007801PRDM59191.600Choloepus_hoffmanni
ENSBTAG00000012111PRDM510083.412ENSCPBG00000024735PRDM510083.255Chrysemys_picta_bellii
ENSBTAG00000012111PRDM510098.734ENSCANG00000036807PRDM510098.734Colobus_angolensis_palliatus
ENSBTAG00000012111PRDM510096.519ENSCGRG00001010581Prdm510096.519Cricetulus_griseus_chok1gshd
ENSBTAG00000012111PRDM59579.734ENSCGRG00000010996-9979.734Cricetulus_griseus_crigri
ENSBTAG00000012111PRDM510076.228ENSCSEG00000019979prdm510076.424Cynoglossus_semilaevis
ENSBTAG00000012111PRDM510074.802ENSCVAG00000013692prdm510074.802Cyprinodon_variegatus
ENSBTAG00000012111PRDM510077.215ENSDARG00000006288prdm510077.215Danio_rerio
ENSBTAG00000012111PRDM59195.478ENSDNOG00000002009PRDM510095.478Dasypus_novemcinctus
ENSBTAG00000012111PRDM510097.152ENSDORG00000007739Prdm510097.152Dipodomys_ordii
ENSBTAG00000012111PRDM59574.124ENSETEG00000020268PRDM510074.124Echinops_telfairi
ENSBTAG00000012111PRDM59967.727ENSEBUG00000004301prdm510068.203Eptatretus_burgeri
ENSBTAG00000012111PRDM510099.051ENSEASG00005018365PRDM510099.051Equus_asinus_asinus
ENSBTAG00000012111PRDM59996.140ENSECAG00000011516PRDM59096.140Equus_caballus
ENSBTAG00000012111PRDM510072.340ENSECAG00000024747-10084.663Equus_caballus
ENSBTAG00000012111PRDM59986.285ENSEEUG00000010306PRDM510086.285Erinaceus_europaeus
ENSBTAG00000012111PRDM59976.796ENSELUG00000005894prdm59376.980Esox_lucius
ENSBTAG00000012111PRDM510096.825ENSFCAG00000025656PRDM510096.825Felis_catus
ENSBTAG00000012111PRDM59978.816ENSFALG00000008381PRDM510078.816Ficedula_albicollis
ENSBTAG00000012111PRDM510098.101ENSFDAG00000021361PRDM510098.101Fukomys_damarensis
ENSBTAG00000012111PRDM510076.862ENSFHEG00000013040prdm510076.862Fundulus_heteroclitus
ENSBTAG00000012111PRDM59569.737ENSGMOG00000012038prdm510069.737Gadus_morhua
ENSBTAG00000012111PRDM510084.202ENSGALG00000011963PRDM510084.202Gallus_gallus
ENSBTAG00000012111PRDM59978.229ENSGAFG00000019233prdm59578.413Gambusia_affinis
ENSBTAG00000012111PRDM59981.992ENSGAGG00000020362PRDM59982.184Gopherus_agassizii
ENSBTAG00000012111PRDM510098.734ENSGGOG00000013562PRDM510098.734Gorilla_gorilla
ENSBTAG00000012111PRDM510076.545ENSHBUG00000023375prdm510076.862Haplochromis_burtoni
ENSBTAG00000012111PRDM510082.927ENSHGLG00000003010PRDM510088.608Heterocephalus_glaber_female
ENSBTAG00000012111PRDM510097.785ENSHGLG00100003696PRDM510097.785Heterocephalus_glaber_male
ENSBTAG00000012111PRDM510078.165ENSHCOG00000012131prdm59978.605Hippocampus_comes
ENSBTAG00000012111PRDM510079.272ENSIPUG00000001248prdm59979.272Ictalurus_punctatus
ENSBTAG00000012111PRDM59593.671ENSSTOG00000004741PRDM510093.671Ictidomys_tridecemlineatus
ENSBTAG00000012111PRDM59597.152ENSJJAG00000011464Prdm510097.152Jaculus_jaculus
ENSBTAG00000012111PRDM510076.704ENSKMAG00000013663prdm510076.704Kryptolebias_marmoratus
ENSBTAG00000012111PRDM510078.605ENSLBEG00000022736prdm510078.922Labrus_bergylta
ENSBTAG00000012111PRDM59282.842ENSLACG00000009187PRDM59982.842Latimeria_chalumnae
ENSBTAG00000012111PRDM510079.873ENSLOCG00000009778prdm59979.873Lepisosteus_oculatus
ENSBTAG00000012111PRDM510092.222ENSLAFG00000006532PRDM510092.222Loxodonta_africana
ENSBTAG00000012111PRDM510098.734ENSMFAG00000045845PRDM510098.734Macaca_fascicularis
ENSBTAG00000012111PRDM510098.734ENSMMUG00000003249PRDM510098.734Macaca_mulatta
ENSBTAG00000012111PRDM510098.734ENSMNEG00000019018PRDM510098.734Macaca_nemestrina
ENSBTAG00000012111PRDM59595.993ENSMLEG00000023145PRDM510095.993Mandrillus_leucophaeus
ENSBTAG00000012111PRDM510078.639ENSMAMG00000013419prdm510078.605Mastacembelus_armatus
ENSBTAG00000012111PRDM510076.545ENSMZEG00005020645prdm510076.862Maylandia_zebra
ENSBTAG00000012111PRDM59583.721ENSMGAG00000010710PRDM510083.721Meleagris_gallopavo
ENSBTAG00000012111PRDM510096.519ENSMAUG00000006768Prdm510096.519Mesocricetus_auratus
ENSBTAG00000012111PRDM510097.785ENSMICG00000001459PRDM510097.785Microcebus_murinus
ENSBTAG00000012111PRDM510096.519ENSMOCG00000016267Prdm510096.519Microtus_ochrogaster
ENSBTAG00000012111PRDM510076.704ENSMMOG00000006035prdm510076.704Mola_mola
ENSBTAG00000012111PRDM510080.411ENSMODG00000018942PRDM510080.411Monodelphis_domestica
ENSBTAG00000012111PRDM510073.693ENSMALG00000013934prdm510073.693Monopterus_albus
ENSBTAG00000012111PRDM510096.835MGP_CAROLIEiJ_G0028463Prdm510096.835Mus_caroli
ENSBTAG00000012111PRDM510096.519ENSMUSG00000029913Prdm510096.519Mus_musculus
ENSBTAG00000012111PRDM510096.835MGP_PahariEiJ_G0022203Prdm510096.835Mus_pahari
ENSBTAG00000012111PRDM510096.519MGP_SPRETEiJ_G0029467Prdm510096.519Mus_spretus
ENSBTAG00000012111PRDM510096.349ENSMPUG00000017415PRDM510096.349Mustela_putorius_furo
ENSBTAG00000012111PRDM59185.467ENSMLUG00000006097PRDM510085.467Myotis_lucifugus
ENSBTAG00000012111PRDM510097.152ENSNGAG00000018317Prdm510097.152Nannospalax_galili
ENSBTAG00000012111PRDM510068.438ENSNBRG00000004976prdm510073.144Neolamprologus_brichardi
ENSBTAG00000012111PRDM510098.734ENSNLEG00000009107PRDM510098.734Nomascus_leucogenys
ENSBTAG00000012111PRDM58489.831ENSMEUG00000006576-7189.831Notamacropus_eugenii
ENSBTAG00000012111PRDM59575.260ENSOPRG00000011066-8975.260Ochotona_princeps
ENSBTAG00000012111PRDM59998.101ENSODEG00000009133PRDM510098.101Octodon_degus
ENSBTAG00000012111PRDM510078.922ENSONIG00000003111prdm59979.081Oreochromis_niloticus
ENSBTAG00000012111PRDM59976.641ENSOANG00000015109PRDM59776.641Ornithorhynchus_anatinus
ENSBTAG00000012111PRDM56887.778ENSOANG00000006197-10087.778Ornithorhynchus_anatinus
ENSBTAG00000012111PRDM59388.075ENSOCUG00000013454PRDM510089.438Oryctolagus_cuniculus
ENSBTAG00000012111PRDM510076.704ENSORLG00000016247prdm510077.021Oryzias_latipes
ENSBTAG00000012111PRDM510076.862ENSORLG00020018051prdm510076.862Oryzias_latipes_hni
ENSBTAG00000012111PRDM510076.704ENSORLG00015013760prdm510077.021Oryzias_latipes_hsok
ENSBTAG00000012111PRDM510076.899ENSOMEG00000005143prdm510077.215Oryzias_melastigma
ENSBTAG00000012111PRDM58487.759ENSOGAG00000009996PRDM59887.290Otolemur_garnettii
ENSBTAG00000012111PRDM59596.175ENSOARG00000015473PRDM510098.249Ovis_aries
ENSBTAG00000012111PRDM59595.840ENSPPAG00000043045PRDM510095.911Pan_paniscus
ENSBTAG00000012111PRDM510096.825ENSPPRG00000001020PRDM510096.825Panthera_pardus
ENSBTAG00000012111PRDM59596.494ENSPTIG00000010807PRDM59596.494Panthera_tigris_altaica
ENSBTAG00000012111PRDM510098.734ENSPTRG00000016403PRDM510098.734Pan_troglodytes
ENSBTAG00000012111PRDM510098.734ENSPANG00000023612PRDM510098.734Papio_anubis
ENSBTAG00000012111PRDM510053.054ENSPKIG00000015492prdm510051.956Paramormyrops_kingsleyae
ENSBTAG00000012111PRDM510083.728ENSPSIG00000013505PRDM510084.044Pelodiscus_sinensis
ENSBTAG00000012111PRDM510073.217ENSPMGG00000012622prdm510073.851Periophthalmus_magnuspinnatus
ENSBTAG00000012111PRDM57371.359ENSPMAG00000005248prdm510071.359Petromyzon_marinus
ENSBTAG00000012111PRDM59970.317ENSPFOG00000018630prdm59970.370Poecilia_formosa
ENSBTAG00000012111PRDM510078.922ENSPLAG00000014148prdm510078.922Poecilia_latipinna
ENSBTAG00000012111PRDM510077.179ENSPMEG00000018002prdm510077.179Poecilia_mexicana
ENSBTAG00000012111PRDM510077.179ENSPREG00000018366prdm510077.179Poecilia_reticulata
ENSBTAG00000012111PRDM510096.032ENSPPYG00000015031PRDM510096.032Pongo_abelii
ENSBTAG00000012111PRDM59589.816ENSPCAG00000011671PRDM510089.816Procavia_capensis
ENSBTAG00000012111PRDM510097.785ENSPCOG00000022828PRDM510097.785Propithecus_coquereli
ENSBTAG00000012111PRDM59588.314ENSPVAG00000012309PRDM510088.314Pteropus_vampyrus
ENSBTAG00000012111PRDM510076.862ENSPNYG00000012194prdm510076.862Pundamilia_nyererei
ENSBTAG00000012111PRDM59374.703ENSPNAG00000023191-9974.830Pygocentrus_nattereri
ENSBTAG00000012111PRDM510076.545ENSPNAG00000026181prdm510077.179Pygocentrus_nattereri
ENSBTAG00000012111PRDM59984.184ENSRNOG00000023679Prdm59984.184Rattus_norvegicus
ENSBTAG00000012111PRDM510098.734ENSRBIG00000041307PRDM510098.734Rhinopithecus_bieti
ENSBTAG00000012111PRDM59578.918ENSRROG00000035343PRDM510085.476Rhinopithecus_roxellana
ENSBTAG00000012111PRDM510098.418ENSSBOG00000022100PRDM510098.418Saimiri_boliviensis_boliviensis
ENSBTAG00000012111PRDM59179.098ENSSHAG00000003250PRDM510079.303Sarcophilus_harrisii
ENSBTAG00000012111PRDM510074.960ENSSFOG00015020478prdm510075.436Scleropages_formosus
ENSBTAG00000012111PRDM510079.239ENSSMAG00000018844prdm59979.239Scophthalmus_maximus
ENSBTAG00000012111PRDM59977.860ENSSDUG00000020397prdm510077.021Seriola_dumerili
ENSBTAG00000012111PRDM59978.893ENSSLDG00000013353prdm510077.021Seriola_lalandi_dorsalis
ENSBTAG00000012111PRDM59598.291ENSSARG00000014129-8098.291Sorex_araneus
ENSBTAG00000012111PRDM510089.873ENSSPUG00000009941PRDM510089.873Sphenodon_punctatus
ENSBTAG00000012111PRDM510078.764ENSSPAG00000013866prdm510078.764Stegastes_partitus
ENSBTAG00000012111PRDM510097.619ENSSSCG00000009101PRDM510097.619Sus_scrofa
ENSBTAG00000012111PRDM59583.806ENSTGUG00000001920PRDM510083.806Taeniopygia_guttata
ENSBTAG00000012111PRDM510076.070ENSTRUG00000013850prdm510076.070Takifugu_rubripes
ENSBTAG00000012111PRDM510064.873ENSTNIG00000005901prdm510064.873Tetraodon_nigroviridis
ENSBTAG00000012111PRDM59590.137ENSTBEG00000015386PRDM58690.137Tupaia_belangeri
ENSBTAG00000012111PRDM510097.302ENSTTRG00000010996PRDM510097.302Tursiops_truncatus
ENSBTAG00000012111PRDM59597.436ENSUAMG00000009994PRDM57797.436Ursus_americanus
ENSBTAG00000012111PRDM59599.051ENSUMAG00000003733PRDM59999.051Ursus_maritimus
ENSBTAG00000012111PRDM59787.908ENSVPAG00000007435PRDM510087.908Vicugna_pacos
ENSBTAG00000012111PRDM59396.763ENSVVUG00000013192PRDM510096.763Vulpes_vulpes
ENSBTAG00000012111PRDM510078.922ENSXETG00000002101prdm510078.922Xenopus_tropicalis
ENSBTAG00000012111PRDM510076.535ENSXCOG00000008567prdm510077.338Xiphophorus_couchianus
ENSBTAG00000012111PRDM59978.044ENSXMAG00000013825prdm510077.338Xiphophorus_maculatus

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