EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000012243 (Gene tree)
Gene ID: 511587
Gene Symbol: POLR1E
Alias: -
Full Name: Bos taurus RNA polymerase I subunit E (POLR1E)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 15978 bases
Position: chr8:61610188-61626165
Accession: NM_001034408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000016250	RNA_pol_I_A49	PF06870.12	3.4e-113	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000016250	-	1629	-	ENSBTAP00000016250	419 (aa)	-	Q3SZ29

Gene Model

Click here to download ENSBTAG00000012243's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000012243's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000012243	POLR1E	100	87.112	ENSG00000137054	POLR1E	100	87.112	Homo_sapiens
ENSBTAG00000012243	POLR1E	98	43.237	ENSAPOG00000012452	polr1e	99	43.237	Acanthochromis_polyacanthus
ENSBTAG00000012243	POLR1E	100	80.000	ENSAMEG00000010193	POLR1E	97	80.000	Ailuropoda_melanoleuca
ENSBTAG00000012243	POLR1E	93	44.670	ENSACIG00000009884	polr1e	99	44.670	Amphilophus_citrinellus
ENSBTAG00000012243	POLR1E	98	46.618	ENSAOCG00000005665	polr1e	99	46.618	Amphiprion_ocellaris
ENSBTAG00000012243	POLR1E	98	46.377	ENSAPEG00000020581	polr1e	99	46.377	Amphiprion_percula
ENSBTAG00000012243	POLR1E	97	48.284	ENSATEG00000020609	polr1e	98	48.284	Anabas_testudineus
ENSBTAG00000012243	POLR1E	80	57.105	ENSAPLG00000010340	POLR1E	99	57.105	Anas_platyrhynchos
ENSBTAG00000012243	POLR1E	100	87.112	ENSANAG00000038046	POLR1E	100	87.112	Aotus_nancymaae
ENSBTAG00000012243	POLR1E	99	44.418	ENSACLG00000013685	polr1e	99	44.418	Astatotilapia_calliptera
ENSBTAG00000012243	POLR1E	97	42.233	ENSAMXG00000018181	polr1e	98	42.233	Astyanax_mexicanus
ENSBTAG00000012243	POLR1E	95	83.081	ENSCJAG00000010512	POLR1E	93	87.433	Callithrix_jacchus
ENSBTAG00000012243	POLR1E	100	88.544	ENSCAFG00000002377	POLR1E	100	88.544	Canis_familiaris
ENSBTAG00000012243	POLR1E	100	88.783	ENSCAFG00020017851	POLR1E	100	88.783	Canis_lupus_dingo
ENSBTAG00000012243	POLR1E	100	96.181	ENSCHIG00000019479	POLR1E	100	96.181	Capra_hircus
ENSBTAG00000012243	POLR1E	100	86.396	ENSTSYG00000002075	POLR1E	100	86.396	Carlito_syrichta
ENSBTAG00000012243	POLR1E	68	85.017	ENSCAPG00000015653	POLR1E	99	85.017	Cavia_aperea
ENSBTAG00000012243	POLR1E	99	84.928	ENSCPOG00000009965	POLR1E	100	84.928	Cavia_porcellus
ENSBTAG00000012243	POLR1E	100	78.998	ENSCCAG00000029460	POLR1E	100	78.998	Cebus_capucinus
ENSBTAG00000012243	POLR1E	100	86.396	ENSCATG00000031732	POLR1E	100	88.983	Cercocebus_atys
ENSBTAG00000012243	POLR1E	87	88.525	ENSCLAG00000012701	POLR1E	96	88.525	Chinchilla_lanigera
ENSBTAG00000012243	POLR1E	100	86.396	ENSCSAG00000010782	POLR1E	100	86.396	Chlorocebus_sabaeus
ENSBTAG00000012243	POLR1E	95	77.273	ENSCHOG00000013024	POLR1E	83	77.273	Choloepus_hoffmanni
ENSBTAG00000012243	POLR1E	98	68.127	ENSCPBG00000006923	POLR1E	99	68.127	Chrysemys_picta_bellii
ENSBTAG00000012243	POLR1E	100	85.919	ENSCANG00000036112	POLR1E	100	87.288	Colobus_angolensis_palliatus
ENSBTAG00000012243	POLR1E	99	83.254	ENSCGRG00001006197	Polr1e	96	83.254	Cricetulus_griseus_chok1gshd
ENSBTAG00000012243	POLR1E	99	82.775	ENSCGRG00000006430	Polr1e	96	82.775	Cricetulus_griseus_crigri
ENSBTAG00000012243	POLR1E	94	43.544	ENSCSEG00000005121	polr1e	96	43.544	Cynoglossus_semilaevis
ENSBTAG00000012243	POLR1E	97	44.390	ENSCVAG00000019759	polr1e	98	44.390	Cyprinodon_variegatus
ENSBTAG00000012243	POLR1E	94	46.096	ENSDARG00000006434	polr1e	97	45.499	Danio_rerio
ENSBTAG00000012243	POLR1E	100	76.282	ENSDNOG00000010257	POLR1E	99	76.068	Dasypus_novemcinctus
ENSBTAG00000012243	POLR1E	85	82.123	ENSETEG00000018204	POLR1E	99	82.123	Echinops_telfairi
ENSBTAG00000012243	POLR1E	100	90.453	ENSEASG00005000675	POLR1E	100	90.453	Equus_asinus_asinus
ENSBTAG00000012243	POLR1E	100	90.692	ENSECAG00000014669	POLR1E	100	90.692	Equus_caballus
ENSBTAG00000012243	POLR1E	95	75.628	ENSEEUG00000011928	POLR1E	85	75.628	Erinaceus_europaeus
ENSBTAG00000012243	POLR1E	97	47.549	ENSELUG00000008150	polr1e	97	47.549	Esox_lucius
ENSBTAG00000012243	POLR1E	100	88.305	ENSFCAG00000013081	POLR1E	100	88.305	Felis_catus
ENSBTAG00000012243	POLR1E	95	60.705	ENSFALG00000012950	POLR1E	99	60.705	Ficedula_albicollis
ENSBTAG00000012243	POLR1E	99	85.885	ENSFDAG00000016917	POLR1E	100	85.885	Fukomys_damarensis
ENSBTAG00000012243	POLR1E	98	44.444	ENSFHEG00000009801	polr1e	99	44.444	Fundulus_heteroclitus
ENSBTAG00000012243	POLR1E	96	38.293	ENSGMOG00000003336	POLR1E	96	39.173	Gadus_morhua
ENSBTAG00000012243	POLR1E	98	62.530	ENSGALG00000005395	POLR1E	99	62.530	Gallus_gallus
ENSBTAG00000012243	POLR1E	97	46.324	ENSGAFG00000004850	polr1e	98	46.324	Gambusia_affinis
ENSBTAG00000012243	POLR1E	97	43.552	ENSGACG00000016087	polr1e	98	43.552	Gasterosteus_aculeatus
ENSBTAG00000012243	POLR1E	98	60.827	ENSGAGG00000001659	POLR1E	98	60.870	Gopherus_agassizii
ENSBTAG00000012243	POLR1E	100	86.874	ENSGGOG00000001882	POLR1E	100	88.136	Gorilla_gorilla
ENSBTAG00000012243	POLR1E	99	44.418	ENSHBUG00000002559	polr1e	99	44.418	Haplochromis_burtoni
ENSBTAG00000012243	POLR1E	99	86.842	ENSHGLG00000002036	POLR1E	100	86.842	Heterocephalus_glaber_female
ENSBTAG00000012243	POLR1E	99	87.081	ENSHGLG00100012784	POLR1E	100	87.081	Heterocephalus_glaber_male
ENSBTAG00000012243	POLR1E	97	45.098	ENSHCOG00000002774	polr1e	98	45.343	Hippocampus_comes
ENSBTAG00000012243	POLR1E	97	43.932	ENSIPUG00000003019	polr1e	98	43.932	Ictalurus_punctatus
ENSBTAG00000012243	POLR1E	100	85.203	ENSSTOG00000009810	POLR1E	100	85.203	Ictidomys_tridecemlineatus
ENSBTAG00000012243	POLR1E	99	82.734	ENSJJAG00000020731	Polr1e	96	82.734	Jaculus_jaculus
ENSBTAG00000012243	POLR1E	98	43.373	ENSKMAG00000000046	polr1e	99	43.373	Kryptolebias_marmoratus
ENSBTAG00000012243	POLR1E	99	46.172	ENSLBEG00000003104	polr1e	99	46.411	Labrus_bergylta
ENSBTAG00000012243	POLR1E	85	63.989	ENSLACG00000003416	POLR1E	99	63.989	Latimeria_chalumnae
ENSBTAG00000012243	POLR1E	99	49.642	ENSLOCG00000012859	polr1e	99	49.642	Lepisosteus_oculatus
ENSBTAG00000012243	POLR1E	100	87.351	ENSLAFG00000012831	POLR1E	99	87.351	Loxodonta_africana
ENSBTAG00000012243	POLR1E	100	86.635	ENSMFAG00000045465	POLR1E	100	88.983	Macaca_fascicularis
ENSBTAG00000012243	POLR1E	100	86.635	ENSMMUG00000017892	POLR1E	100	88.983	Macaca_mulatta
ENSBTAG00000012243	POLR1E	100	79.907	ENSMNEG00000040283	POLR1E	100	85.841	Macaca_nemestrina
ENSBTAG00000012243	POLR1E	100	86.635	ENSMLEG00000031135	POLR1E	100	88.983	Mandrillus_leucophaeus
ENSBTAG00000012243	POLR1E	99	45.368	ENSMAMG00000001260	polr1e	99	45.368	Mastacembelus_armatus
ENSBTAG00000012243	POLR1E	99	44.656	ENSMZEG00005021536	polr1e	99	44.656	Maylandia_zebra
ENSBTAG00000012243	POLR1E	100	81.862	ENSMAUG00000021044	Polr1e	97	81.862	Mesocricetus_auratus
ENSBTAG00000012243	POLR1E	100	89.260	ENSMICG00000003673	POLR1E	100	89.260	Microcebus_murinus
ENSBTAG00000012243	POLR1E	99	82.057	ENSMOCG00000012920	Polr1e	96	82.057	Microtus_ochrogaster
ENSBTAG00000012243	POLR1E	97	45.477	ENSMMOG00000007391	polr1e	98	45.477	Mola_mola
ENSBTAG00000012243	POLR1E	95	76.010	ENSMODG00000002884	POLR1E	97	76.010	Monodelphis_domestica
ENSBTAG00000012243	POLR1E	99	45.131	ENSMALG00000002665	polr1e	99	45.131	Monopterus_albus
ENSBTAG00000012243	POLR1E	99	79.327	MGP_CAROLIEiJ_G0025967	Polr1e	97	80.253	Mus_caroli
ENSBTAG00000012243	POLR1E	99	80.048	ENSMUSG00000028318	Polr1e	97	80.759	Mus_musculus
ENSBTAG00000012243	POLR1E	99	81.250	MGP_PahariEiJ_G0024114	Polr1e	97	82.025	Mus_pahari
ENSBTAG00000012243	POLR1E	99	79.327	MGP_SPRETEiJ_G0026930	Polr1e	97	80.000	Mus_spretus
ENSBTAG00000012243	POLR1E	100	79.744	ENSMPUG00000006040	POLR1E	99	79.531	Mustela_putorius_furo
ENSBTAG00000012243	POLR1E	100	89.737	ENSMLUG00000012688	POLR1E	97	89.737	Myotis_lucifugus
ENSBTAG00000012243	POLR1E	99	83.732	ENSNGAG00000002520	Polr1e	96	83.732	Nannospalax_galili
ENSBTAG00000012243	POLR1E	99	44.893	ENSNBRG00000016822	polr1e	99	44.893	Neolamprologus_brichardi
ENSBTAG00000012243	POLR1E	100	87.112	ENSNLEG00000003616	POLR1E	100	88.136	Nomascus_leucogenys
ENSBTAG00000012243	POLR1E	73	81.250	ENSMEUG00000015372	-	80	81.250	Notamacropus_eugenii
ENSBTAG00000012243	POLR1E	86	74.373	ENSOPRG00000014206	POLR1E	100	74.373	Ochotona_princeps
ENSBTAG00000012243	POLR1E	99	86.603	ENSODEG00000014565	POLR1E	97	86.603	Octodon_degus
ENSBTAG00000012243	POLR1E	99	45.131	ENSONIG00000008921	polr1e	99	45.131	Oreochromis_niloticus
ENSBTAG00000012243	POLR1E	100	83.771	ENSOCUG00000024773	POLR1E	100	83.771	Oryctolagus_cuniculus
ENSBTAG00000012243	POLR1E	98	45.894	ENSORLG00000005143	polr1e	99	45.894	Oryzias_latipes
ENSBTAG00000012243	POLR1E	92	45.876	ENSORLG00020007271	polr1e	99	45.876	Oryzias_latipes_hni
ENSBTAG00000012243	POLR1E	98	45.652	ENSORLG00015000137	polr1e	99	45.652	Oryzias_latipes_hsok
ENSBTAG00000012243	POLR1E	97	44.363	ENSOMEG00000013264	polr1e	96	44.363	Oryzias_melastigma
ENSBTAG00000012243	POLR1E	100	89.260	ENSOGAG00000012981	POLR1E	98	89.260	Otolemur_garnettii
ENSBTAG00000012243	POLR1E	100	97.136	ENSOARG00000011465	POLR1E	97	97.136	Ovis_aries
ENSBTAG00000012243	POLR1E	100	87.351	ENSPPAG00000034566	POLR1E	100	88.983	Pan_paniscus
ENSBTAG00000012243	POLR1E	100	88.305	ENSPPRG00000005649	POLR1E	100	88.305	Panthera_pardus
ENSBTAG00000012243	POLR1E	100	88.305	ENSPTIG00000009774	POLR1E	100	88.305	Panthera_tigris_altaica
ENSBTAG00000012243	POLR1E	100	87.351	ENSPTRG00000020944	POLR1E	100	88.983	Pan_troglodytes
ENSBTAG00000012243	POLR1E	100	86.635	ENSPANG00000025563	POLR1E	100	88.983	Papio_anubis
ENSBTAG00000012243	POLR1E	98	48.804	ENSPKIG00000003562	polr1e	99	48.804	Paramormyrops_kingsleyae
ENSBTAG00000012243	POLR1E	94	64.304	ENSPSIG00000003274	POLR1E	92	64.304	Pelodiscus_sinensis
ENSBTAG00000012243	POLR1E	94	46.500	ENSPMGG00000024169	polr1e	96	46.500	Periophthalmus_magnuspinnatus
ENSBTAG00000012243	POLR1E	100	82.100	ENSPEMG00000019151	-	97	82.100	Peromyscus_maniculatus_bairdii
ENSBTAG00000012243	POLR1E	100	65.952	ENSPEMG00000022300	-	96	65.952	Peromyscus_maniculatus_bairdii
ENSBTAG00000012243	POLR1E	95	75.505	ENSPCIG00000014798	POLR1E	97	75.505	Phascolarctos_cinereus
ENSBTAG00000012243	POLR1E	97	44.676	ENSPFOG00000019627	polr1e	97	44.676	Poecilia_formosa
ENSBTAG00000012243	POLR1E	97	47.059	ENSPLAG00000022679	polr1e	98	47.059	Poecilia_latipinna
ENSBTAG00000012243	POLR1E	85	47.222	ENSPMEG00000022123	polr1e	93	47.222	Poecilia_mexicana
ENSBTAG00000012243	POLR1E	97	46.324	ENSPREG00000009470	polr1e	98	46.324	Poecilia_reticulata
ENSBTAG00000012243	POLR1E	100	86.635	ENSPPYG00000019061	POLR1E	100	86.635	Pongo_abelii
ENSBTAG00000012243	POLR1E	73	71.053	ENSPCAG00000004891	POLR1E	100	71.053	Procavia_capensis
ENSBTAG00000012243	POLR1E	100	89.737	ENSPCOG00000027448	POLR1E	100	89.737	Propithecus_coquereli
ENSBTAG00000012243	POLR1E	95	91.667	ENSPVAG00000007940	POLR1E	83	91.667	Pteropus_vampyrus
ENSBTAG00000012243	POLR1E	99	44.656	ENSPNYG00000001032	polr1e	99	44.656	Pundamilia_nyererei
ENSBTAG00000012243	POLR1E	97	43.066	ENSPNAG00000006987	polr1e	99	43.066	Pygocentrus_nattereri
ENSBTAG00000012243	POLR1E	99	81.055	ENSRNOG00000012664	Polr1e	96	81.055	Rattus_norvegicus
ENSBTAG00000012243	POLR1E	99	83.855	ENSRBIG00000034214	POLR1E	100	86.877	Rhinopithecus_bieti
ENSBTAG00000012243	POLR1E	100	86.158	ENSRROG00000031986	POLR1E	100	88.983	Rhinopithecus_roxellana
ENSBTAG00000012243	POLR1E	100	86.635	ENSSBOG00000021415	POLR1E	100	86.635	Saimiri_boliviensis_boliviensis
ENSBTAG00000012243	POLR1E	85	73.538	ENSSHAG00000016084	POLR1E	99	73.538	Sarcophilus_harrisii
ENSBTAG00000012243	POLR1E	97	48.049	ENSSFOG00015002293	polr1e	98	48.049	Scleropages_formosus
ENSBTAG00000012243	POLR1E	99	47.506	ENSSMAG00000011672	polr1e	94	47.506	Scophthalmus_maximus
ENSBTAG00000012243	POLR1E	97	47.794	ENSSDUG00000022279	polr1e	97	47.794	Seriola_dumerili
ENSBTAG00000012243	POLR1E	97	47.304	ENSSLDG00000024918	polr1e	97	47.304	Seriola_lalandi_dorsalis
ENSBTAG00000012243	POLR1E	64	72.414	ENSSARG00000009810	-	67	72.414	Sorex_araneus
ENSBTAG00000012243	POLR1E	98	66.505	ENSSPUG00000009499	POLR1E	99	66.505	Sphenodon_punctatus
ENSBTAG00000012243	POLR1E	98	47.101	ENSSPAG00000021240	polr1e	99	47.101	Stegastes_partitus
ENSBTAG00000012243	POLR1E	100	90.931	ENSSSCG00000005347	POLR1E	100	90.931	Sus_scrofa
ENSBTAG00000012243	POLR1E	94	52.489	ENSTGUG00000007169	POLR1E	99	52.489	Taeniopygia_guttata
ENSBTAG00000012243	POLR1E	98	43.990	ENSTRUG00000020779	polr1e	99	44.619	Takifugu_rubripes
ENSBTAG00000012243	POLR1E	97	45.721	ENSTNIG00000017812	polr1e	98	45.721	Tetraodon_nigroviridis
ENSBTAG00000012243	POLR1E	100	84.964	ENSTBEG00000013786	POLR1E	88	84.964	Tupaia_belangeri
ENSBTAG00000012243	POLR1E	95	91.228	ENSTTRG00000008294	POLR1E	85	91.228	Tursiops_truncatus
ENSBTAG00000012243	POLR1E	100	89.260	ENSUAMG00000012474	POLR1E	100	90.463	Ursus_americanus
ENSBTAG00000012243	POLR1E	100	89.260	ENSUMAG00000011496	POLR1E	100	89.260	Ursus_maritimus
ENSBTAG00000012243	POLR1E	82	86.006	ENSVPAG00000009048	POLR1E	81	86.006	Vicugna_pacos
ENSBTAG00000012243	POLR1E	100	88.305	ENSVVUG00000019954	POLR1E	100	88.305	Vulpes_vulpes
ENSBTAG00000012243	POLR1E	98	52.657	ENSXETG00000006533	polr1e	99	52.657	Xenopus_tropicalis
ENSBTAG00000012243	POLR1E	97	45.833	ENSXCOG00000013706	polr1e	98	45.833	Xiphophorus_couchianus
ENSBTAG00000012243	POLR1E	97	47.059	ENSXMAG00000012484	polr1e	98	47.059	Xiphophorus_maculatus