EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000012412 (Gene tree)
Gene ID: 530483
Gene Symbol: URB1
Alias: -
Full Name: Bos taurus URB1 ribosome biogenesis 1 homolog (S. cerevisiae) (URB1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 77078 bases
Position: chr1:3103263-3180340
Accession: NM_001205980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000016473	Npa1	PF11707.8	7.2e-87	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000016473	-	7393	-	ENSBTAP00000016473	2269 (aa)	-	F1MZA7

Gene Model

Click here to download ENSBTAG00000012412's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000012412's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000012412	URB1	99	77.871	ENSG00000142207	URB1	99	77.641	Homo_sapiens
ENSBTAG00000012412	URB1	99	41.934	ENSAPOG00000020308	urb1	98	47.589	Acanthochromis_polyacanthus
ENSBTAG00000012412	URB1	99	79.772	ENSAMEG00000011998	URB1	99	79.684	Ailuropoda_melanoleuca
ENSBTAG00000012412	URB1	94	44.527	ENSACIG00000003248	urb1	96	44.481	Amphilophus_citrinellus
ENSBTAG00000012412	URB1	99	40.150	ENSAOCG00000010364	urb1	98	40.194	Amphiprion_ocellaris
ENSBTAG00000012412	URB1	96	51.569	ENSAPEG00000010758	urb1	98	51.255	Amphiprion_percula
ENSBTAG00000012412	URB1	99	42.765	ENSATEG00000011790	urb1	99	42.637	Anabas_testudineus
ENSBTAG00000012412	URB1	97	55.121	ENSAPLG00000012791	URB1	100	55.036	Anas_platyrhynchos
ENSBTAG00000012412	URB1	99	51.965	ENSACAG00000002817	URB1	99	51.675	Anolis_carolinensis
ENSBTAG00000012412	URB1	99	77.520	ENSANAG00000024617	URB1	99	77.476	Aotus_nancymaae
ENSBTAG00000012412	URB1	99	44.444	ENSACLG00000024865	urb1	99	43.935	Astatotilapia_calliptera
ENSBTAG00000012412	URB1	99	40.114	ENSAMXG00000012306	urb1	99	39.657	Astyanax_mexicanus
ENSBTAG00000012412	URB1	99	76.805	ENSCJAG00000009118	URB1	99	76.849	Callithrix_jacchus
ENSBTAG00000012412	URB1	99	80.359	ENSCAFG00000008892	URB1	99	80.359	Canis_familiaris
ENSBTAG00000012412	URB1	99	79.088	ENSCAFG00020025994	-	99	79.079	Canis_lupus_dingo
ENSBTAG00000012412	URB1	99	80.096	ENSCAFG00020025987	-	99	79.956	Canis_lupus_dingo
ENSBTAG00000012412	URB1	99	93.342	ENSCHIG00000015645	URB1	99	93.342	Capra_hircus
ENSBTAG00000012412	URB1	99	77.105	ENSTSYG00000013286	URB1	99	77.105	Carlito_syrichta
ENSBTAG00000012412	URB1	98	72.735	ENSCAPG00000015589	URB1	99	72.646	Cavia_aperea
ENSBTAG00000012412	URB1	99	73.980	ENSCPOG00000006748	URB1	99	73.892	Cavia_porcellus
ENSBTAG00000012412	URB1	99	77.773	ENSCCAG00000021299	URB1	99	77.817	Cebus_capucinus
ENSBTAG00000012412	URB1	99	77.904	ENSCATG00000042630	URB1	99	77.861	Cercocebus_atys
ENSBTAG00000012412	URB1	99	75.285	ENSCLAG00000005262	URB1	99	75.198	Chinchilla_lanigera
ENSBTAG00000012412	URB1	99	76.255	ENSCSAG00000009584	URB1	99	76.211	Chlorocebus_sabaeus
ENSBTAG00000012412	URB1	99	57.815	ENSCPBG00000006454	URB1	99	57.510	Chrysemys_picta_bellii
ENSBTAG00000012412	URB1	99	77.641	ENSCANG00000031088	URB1	99	77.598	Colobus_angolensis_palliatus
ENSBTAG00000012412	URB1	98	71.803	ENSCGRG00001010616	Urb1	99	71.711	Cricetulus_griseus_chok1gshd
ENSBTAG00000012412	URB1	98	71.493	ENSCGRG00000015840	Urb1	99	71.480	Cricetulus_griseus_crigri
ENSBTAG00000012412	URB1	99	42.286	ENSCSEG00000012616	urb1	99	42.167	Cynoglossus_semilaevis
ENSBTAG00000012412	URB1	97	52.008	ENSCVAG00000009076	urb1	97	54.884	Cyprinodon_variegatus
ENSBTAG00000012412	URB1	99	42.795	ENSDARG00000060308	urb1	99	42.795	Danio_rerio
ENSBTAG00000012412	URB1	85	77.177	ENSDNOG00000015586	URB1	99	77.125	Dasypus_novemcinctus
ENSBTAG00000012412	URB1	99	74.121	ENSDORG00000006735	Urb1	99	74.077	Dipodomys_ordii
ENSBTAG00000012412	URB1	93	80.218	ENSETEG00000009080	URB1	92	80.218	Echinops_telfairi
ENSBTAG00000012412	URB1	99	79.465	ENSEASG00005007711	URB1	97	82.743	Equus_asinus_asinus
ENSBTAG00000012412	URB1	97	88.724	ENSECAG00000013206	URB1	99	89.310	Equus_caballus
ENSBTAG00000012412	URB1	58	86.667	ENSEEUG00000003626	-	55	86.667	Erinaceus_europaeus
ENSBTAG00000012412	URB1	99	43.907	ENSELUG00000020516	urb1	98	44.000	Esox_lucius
ENSBTAG00000012412	URB1	99	79.596	ENSFCAG00000002177	URB1	99	79.684	Felis_catus
ENSBTAG00000012412	URB1	98	50.749	ENSFALG00000004636	URB1	99	50.617	Ficedula_albicollis
ENSBTAG00000012412	URB1	99	75.306	ENSFDAG00000007288	URB1	95	75.306	Fukomys_damarensis
ENSBTAG00000012412	URB1	99	41.022	ENSFHEG00000000202	urb1	99	41.153	Fundulus_heteroclitus
ENSBTAG00000012412	URB1	92	47.573	ENSGMOG00000001838	urb1	93	47.132	Gadus_morhua
ENSBTAG00000012412	URB1	99	55.055	ENSGALG00000015887	URB1	99	54.923	Gallus_gallus
ENSBTAG00000012412	URB1	90	54.704	ENSGAFG00000020694	urb1	96	54.704	Gambusia_affinis
ENSBTAG00000012412	URB1	99	44.581	ENSGACG00000011703	urb1	99	44.493	Gasterosteus_aculeatus
ENSBTAG00000012412	URB1	99	57.224	ENSGAGG00000022544	URB1	99	57.050	Gopherus_agassizii
ENSBTAG00000012412	URB1	99	77.729	ENSGGOG00000000285	URB1	99	77.641	Gorilla_gorilla
ENSBTAG00000012412	URB1	99	44.400	ENSHBUG00000001904	urb1	99	43.892	Haplochromis_burtoni
ENSBTAG00000012412	URB1	100	73.434	ENSHGLG00000004907	URB1	100	73.348	Heterocephalus_glaber_female
ENSBTAG00000012412	URB1	100	74.004	ENSHGLG00100010749	URB1	100	73.917	Heterocephalus_glaber_male
ENSBTAG00000012412	URB1	70	52.055	ENSHCOG00000018683	urb1	98	52.838	Hippocampus_comes
ENSBTAG00000012412	URB1	99	39.256	ENSIPUG00000014721	urb1	99	39.073	Ictalurus_punctatus
ENSBTAG00000012412	URB1	99	76.424	ENSSTOG00000004539	URB1	99	76.468	Ictidomys_tridecemlineatus
ENSBTAG00000012412	URB1	98	40.828	ENSKMAG00000006001	urb1	97	46.931	Kryptolebias_marmoratus
ENSBTAG00000012412	URB1	96	41.310	ENSLBEG00000027208	urb1	98	51.055	Labrus_bergylta
ENSBTAG00000012412	URB1	99	47.693	ENSLACG00000017059	URB1	100	47.520	Latimeria_chalumnae
ENSBTAG00000012412	URB1	99	45.647	ENSLOCG00000009190	urb1	99	45.712	Lepisosteus_oculatus
ENSBTAG00000012412	URB1	99	74.530	ENSLAFG00000010407	URB1	99	74.442	Loxodonta_africana
ENSBTAG00000012412	URB1	99	77.904	ENSMFAG00000034391	URB1	97	77.817	Macaca_fascicularis
ENSBTAG00000012412	URB1	99	77.729	ENSMMUG00000010295	URB1	99	77.641	Macaca_mulatta
ENSBTAG00000012412	URB1	99	76.556	ENSMNEG00000032981	URB1	99	76.468	Macaca_nemestrina
ENSBTAG00000012412	URB1	99	77.948	ENSMLEG00000041435	URB1	99	77.904	Mandrillus_leucophaeus
ENSBTAG00000012412	URB1	98	42.965	ENSMAMG00000011238	urb1	95	55.742	Mastacembelus_armatus
ENSBTAG00000012412	URB1	99	39.921	ENSMZEG00005011862	urb1	99	39.463	Maylandia_zebra
ENSBTAG00000012412	URB1	98	55.402	ENSMGAG00000014512	URB1	99	55.358	Meleagris_gallopavo
ENSBTAG00000012412	URB1	94	77.664	ENSMAUG00000010516	Urb1	99	77.664	Mesocricetus_auratus
ENSBTAG00000012412	URB1	100	77.344	ENSMICG00000016424	URB1	100	77.257	Microcebus_murinus
ENSBTAG00000012412	URB1	99	70.263	ENSMOCG00000012613	Urb1	99	70.263	Microtus_ochrogaster
ENSBTAG00000012412	URB1	99	62.046	ENSMODG00000021076	URB1	99	61.915	Monodelphis_domestica
ENSBTAG00000012412	URB1	96	42.786	ENSMALG00000017411	urb1	97	51.522	Monopterus_albus
ENSBTAG00000012412	URB1	99	70.565	MGP_CAROLIEiJ_G0020948	Urb1	99	70.421	Mus_caroli
ENSBTAG00000012412	URB1	99	70.735	ENSMUSG00000039929	Urb1	99	70.678	Mus_musculus
ENSBTAG00000012412	URB1	99	70.609	MGP_PahariEiJ_G0016653	Urb1	99	70.465	Mus_pahari
ENSBTAG00000012412	URB1	99	70.534	MGP_SPRETEiJ_G0021854	Urb1	99	70.508	Mus_spretus
ENSBTAG00000012412	URB1	99	79.541	ENSMPUG00000001123	URB1	99	79.541	Mustela_putorius_furo
ENSBTAG00000012412	URB1	99	71.209	ENSNGAG00000001905	Urb1	99	71.197	Nannospalax_galili
ENSBTAG00000012412	URB1	82	44.832	ENSNBRG00000001049	urb1	99	44.658	Neolamprologus_brichardi
ENSBTAG00000012412	URB1	99	75.759	ENSNLEG00000026872	URB1	99	75.844	Nomascus_leucogenys
ENSBTAG00000012412	URB1	96	56.952	ENSMEUG00000010828	URB1	96	57.270	Notamacropus_eugenii
ENSBTAG00000012412	URB1	99	70.679	ENSOPRG00000013482	URB1	99	70.635	Ochotona_princeps
ENSBTAG00000012412	URB1	99	74.310	ENSODEG00000002587	URB1	99	74.266	Octodon_degus
ENSBTAG00000012412	URB1	99	44.343	ENSONIG00000005599	urb1	99	44.124	Oreochromis_niloticus
ENSBTAG00000012412	URB1	99	75.682	ENSOCUG00000009381	URB1	99	75.638	Oryctolagus_cuniculus
ENSBTAG00000012412	URB1	99	43.534	ENSORLG00000003429	urb1	99	43.446	Oryzias_latipes
ENSBTAG00000012412	URB1	99	43.389	ENSORLG00020013785	urb1	99	43.301	Oryzias_latipes_hni
ENSBTAG00000012412	URB1	99	42.050	ENSORLG00015019421	urb1	98	49.300	Oryzias_latipes_hsok
ENSBTAG00000012412	URB1	77	51.059	ENSOMEG00000002094	urb1	98	51.059	Oryzias_melastigma
ENSBTAG00000012412	URB1	99	76.404	ENSOGAG00000017140	URB1	100	76.316	Otolemur_garnettii
ENSBTAG00000012412	URB1	99	89.398	ENSOARG00000013679	URB1	99	89.313	Ovis_aries
ENSBTAG00000012412	URB1	99	77.948	ENSPPAG00000003423	URB1	99	77.861	Pan_paniscus
ENSBTAG00000012412	URB1	99	79.816	ENSPPRG00000023131	URB1	99	79.903	Panthera_pardus
ENSBTAG00000012412	URB1	92	78.978	ENSPTIG00000016125	URB1	98	79.126	Panthera_tigris_altaica
ENSBTAG00000012412	URB1	99	77.817	ENSPTRG00000013852	URB1	99	77.729	Pan_troglodytes
ENSBTAG00000012412	URB1	99	77.992	ENSPANG00000021964	URB1	99	77.948	Papio_anubis
ENSBTAG00000012412	URB1	97	46.864	ENSPKIG00000003683	urb1	96	46.875	Paramormyrops_kingsleyae
ENSBTAG00000012412	URB1	99	71.968	ENSPEMG00000021205	Urb1	99	71.968	Peromyscus_maniculatus_bairdii
ENSBTAG00000012412	URB1	99	62.150	ENSPCIG00000016350	URB1	100	62.024	Phascolarctos_cinereus
ENSBTAG00000012412	URB1	96	42.760	ENSPLAG00000004371	urb1	99	42.625	Poecilia_latipinna
ENSBTAG00000012412	URB1	98	43.656	ENSPMEG00000006634	urb1	98	43.453	Poecilia_mexicana
ENSBTAG00000012412	URB1	99	43.534	ENSPREG00000013453	urb1	98	43.686	Poecilia_reticulata
ENSBTAG00000012412	URB1	99	77.333	ENSPPYG00000011359	URB1	99	77.149	Pongo_abelii
ENSBTAG00000012412	URB1	99	65.773	ENSPCAG00000007430	URB1	99	65.582	Procavia_capensis
ENSBTAG00000012412	URB1	99	77.763	ENSPCOG00000022695	URB1	99	78.158	Propithecus_coquereli
ENSBTAG00000012412	URB1	99	78.051	ENSPVAG00000000889	URB1	99	77.919	Pteropus_vampyrus
ENSBTAG00000012412	URB1	99	43.192	ENSPNYG00000010589	urb1	99	42.695	Pundamilia_nyererei
ENSBTAG00000012412	URB1	99	40.000	ENSPNAG00000019324	urb1	99	39.799	Pygocentrus_nattereri
ENSBTAG00000012412	URB1	99	70.709	ENSRNOG00000002080	Urb1	99	70.696	Rattus_norvegicus
ENSBTAG00000012412	URB1	99	77.247	ENSRBIG00000033122	URB1	99	77.159	Rhinopithecus_bieti
ENSBTAG00000012412	URB1	99	77.203	ENSRROG00000040237	URB1	99	77.115	Rhinopithecus_roxellana
ENSBTAG00000012412	URB1	99	77.651	ENSSBOG00000027672	URB1	99	77.651	Saimiri_boliviensis_boliviensis
ENSBTAG00000012412	URB1	99	61.861	ENSSHAG00000005140	URB1	100	61.861	Sarcophilus_harrisii
ENSBTAG00000012412	URB1	92	46.917	ENSSFOG00015000339	urb1	98	46.613	Scleropages_formosus
ENSBTAG00000012412	URB1	98	43.833	ENSSMAG00000003782	urb1	99	43.815	Scophthalmus_maximus
ENSBTAG00000012412	URB1	99	44.391	ENSSDUG00000012313	urb1	99	44.304	Seriola_dumerili
ENSBTAG00000012412	URB1	99	44.203	ENSSLDG00000023179	urb1	99	44.030	Seriola_lalandi_dorsalis
ENSBTAG00000012412	URB1	99	53.713	ENSSPUG00000012447	URB1	100	53.692	Sphenodon_punctatus
ENSBTAG00000012412	URB1	99	43.074	ENSSPAG00000006325	urb1	99	43.205	Stegastes_partitus
ENSBTAG00000012412	URB1	99	82.151	ENSSSCG00000032024	URB1	99	81.886	Sus_scrofa
ENSBTAG00000012412	URB1	74	56.615	ENSTGUG00000013442	URB1	100	56.496	Taeniopygia_guttata
ENSBTAG00000012412	URB1	99	42.509	ENSTRUG00000009372	urb1	99	42.215	Takifugu_rubripes
ENSBTAG00000012412	URB1	99	42.230	ENSTNIG00000016277	urb1	99	42.091	Tetraodon_nigroviridis
ENSBTAG00000012412	URB1	81	81.449	ENSTBEG00000010044	URB1	81	81.449	Tupaia_belangeri
ENSBTAG00000012412	URB1	91	83.593	ENSTTRG00000007712	URB1	92	83.593	Tursiops_truncatus
ENSBTAG00000012412	URB1	99	79.947	ENSUAMG00000012231	URB1	99	79.860	Ursus_americanus
ENSBTAG00000012412	URB1	93	80.156	ENSUMAG00000017419	URB1	97	87.379	Ursus_maritimus
ENSBTAG00000012412	URB1	68	92.857	ENSVPAG00000001164	URB1	68	92.857	Vicugna_pacos
ENSBTAG00000012412	URB1	99	79.842	ENSVVUG00000000551	URB1	98	86.833	Vulpes_vulpes
ENSBTAG00000012412	URB1	99	49.591	ENSXETG00000009895	urb1	99	49.313	Xenopus_tropicalis
ENSBTAG00000012412	URB1	98	41.370	ENSXCOG00000005500	urb1	98	41.237	Xiphophorus_couchianus
ENSBTAG00000012412	URB1	98	41.292	ENSXMAG00000007253	urb1	98	41.158	Xiphophorus_maculatus