EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000012463 (Gene tree)
Gene ID: 538512
Gene Symbol: ZMAT3
Alias: -
Full Name: Bos taurus zinc finger matrin-type 3 (ZMAT3)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 32081 bases
Position: chr1:88005930-88038010
Accession: NM_001076108
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000016535	zf-met	PF12874.7	3.8e-24	1	3
ENSBTAP00000016535	zf-met	PF12874.7	3.8e-24	2	3
ENSBTAP00000016535	zf-met	PF12874.7	3.8e-24	3	3
ENSBTAP00000059046	zf-met	PF12874.7	3.8e-24	1	3
ENSBTAP00000059046	zf-met	PF12874.7	3.8e-24	2	3
ENSBTAP00000059046	zf-met	PF12874.7	3.8e-24	3	3
ENSBTAP00000016535	zf-C2H2_jaz	PF12171.8	3.4e-22	1	3
ENSBTAP00000016535	zf-C2H2_jaz	PF12171.8	3.4e-22	2	3
ENSBTAP00000016535	zf-C2H2_jaz	PF12171.8	3.4e-22	3	3
ENSBTAP00000059046	zf-C2H2_jaz	PF12171.8	3.4e-22	1	3
ENSBTAP00000059046	zf-C2H2_jaz	PF12171.8	3.4e-22	2	3
ENSBTAP00000059046	zf-C2H2_jaz	PF12171.8	3.4e-22	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000084595	-	1060	-	ENSBTAP00000059046	289 (aa)	-	UPI000057FB74
ENSBTAT00000016535	-	1607	-	ENSBTAP00000016535	289 (aa)	-	Q0IIC4

Gene Model

Click here to download ENSBTAG00000012463's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta04115	p53 signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000012463's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000012463	ZMAT3	100	93.080	ENSG00000172667	ZMAT3	100	93.080	Homo_sapiens
ENSBTAG00000012463	ZMAT3	80	68.670	ENSAPOG00000015037	zmat3	90	63.602	Acanthochromis_polyacanthus
ENSBTAG00000012463	ZMAT3	100	93.772	ENSAMEG00000010742	ZMAT3	100	93.772	Ailuropoda_melanoleuca
ENSBTAG00000012463	ZMAT3	99	62.759	ENSACIG00000023037	zmat3	82	66.667	Amphilophus_citrinellus
ENSBTAG00000012463	ZMAT3	99	60.274	ENSAOCG00000017955	zmat3	78	69.099	Amphiprion_ocellaris
ENSBTAG00000012463	ZMAT3	99	60.274	ENSAPEG00000014553	zmat3	81	69.099	Amphiprion_percula
ENSBTAG00000012463	ZMAT3	95	63.504	ENSATEG00000022244	zmat3	95	63.910	Anabas_testudineus
ENSBTAG00000012463	ZMAT3	100	81.379	ENSAPLG00000013292	ZMAT3	99	80.969	Anas_platyrhynchos
ENSBTAG00000012463	ZMAT3	93	81.111	ENSACAG00000005005	ZMAT3	99	78.425	Anolis_carolinensis
ENSBTAG00000012463	ZMAT3	94	90.476	ENSANAG00000035673	ZMAT3	96	90.476	Aotus_nancymaae
ENSBTAG00000012463	ZMAT3	89	64.615	ENSACLG00000026272	zmat3	91	64.773	Astatotilapia_calliptera
ENSBTAG00000012463	ZMAT3	92	66.187	ENSAMXG00000009798	zmat3	76	64.388	Astyanax_mexicanus
ENSBTAG00000012463	ZMAT3	100	90.311	ENSCJAG00000013399	ZMAT3	100	90.311	Callithrix_jacchus
ENSBTAG00000012463	ZMAT3	100	94.138	ENSCAFG00000011081	ZMAT3	100	94.138	Canis_familiaris
ENSBTAG00000012463	ZMAT3	100	94.138	ENSCAFG00020023107	ZMAT3	100	94.138	Canis_lupus_dingo
ENSBTAG00000012463	ZMAT3	100	98.270	ENSCHIG00000025074	ZMAT3	100	98.270	Capra_hircus
ENSBTAG00000012463	ZMAT3	100	93.080	ENSTSYG00000026546	ZMAT3	100	93.080	Carlito_syrichta
ENSBTAG00000012463	ZMAT3	100	93.080	ENSCAPG00000014645	ZMAT3	99	93.080	Cavia_aperea
ENSBTAG00000012463	ZMAT3	100	93.080	ENSCPOG00000003865	ZMAT3	100	93.080	Cavia_porcellus
ENSBTAG00000012463	ZMAT3	100	89.619	ENSCCAG00000036721	ZMAT3	100	89.619	Cebus_capucinus
ENSBTAG00000012463	ZMAT3	100	79.931	ENSCATG00000025137	ZMAT3	100	79.931	Cercocebus_atys
ENSBTAG00000012463	ZMAT3	100	94.464	ENSCLAG00000013464	ZMAT3	100	94.464	Chinchilla_lanigera
ENSBTAG00000012463	ZMAT3	100	91.696	ENSCSAG00000012935	ZMAT3	100	91.696	Chlorocebus_sabaeus
ENSBTAG00000012463	ZMAT3	100	92.388	ENSCHOG00000005591	ZMAT3	100	92.388	Choloepus_hoffmanni
ENSBTAG00000012463	ZMAT3	100	79.725	ENSCPBG00000026917	ZMAT3	99	78.351	Chrysemys_picta_bellii
ENSBTAG00000012463	ZMAT3	100	92.388	ENSCANG00000029476	ZMAT3	100	92.388	Colobus_angolensis_palliatus
ENSBTAG00000012463	ZMAT3	100	88.621	ENSCGRG00001012339	Zmat3	99	88.621	Cricetulus_griseus_chok1gshd
ENSBTAG00000012463	ZMAT3	100	88.621	ENSCGRG00000011491	Zmat3	99	88.621	Cricetulus_griseus_crigri
ENSBTAG00000012463	ZMAT3	98	61.246	ENSCSEG00000019463	zmat3	77	68.803	Cynoglossus_semilaevis
ENSBTAG00000012463	ZMAT3	99	60.067	ENSCVAG00000011847	zmat3	93	62.044	Cyprinodon_variegatus
ENSBTAG00000012463	ZMAT3	81	69.672	ENSDARG00000080021	zmat3	86	65.314	Danio_rerio
ENSBTAG00000012463	ZMAT3	100	93.772	ENSDNOG00000012284	ZMAT3	100	93.772	Dasypus_novemcinctus
ENSBTAG00000012463	ZMAT3	100	92.388	ENSDORG00000011801	Zmat3	100	92.388	Dipodomys_ordii
ENSBTAG00000012463	ZMAT3	95	82.906	ENSETEG00000008883	ZMAT3	100	82.906	Echinops_telfairi
ENSBTAG00000012463	ZMAT3	100	95.502	ENSEASG00005016887	ZMAT3	100	95.502	Equus_asinus_asinus
ENSBTAG00000012463	ZMAT3	100	94.810	ENSECAG00000012784	ZMAT3	100	94.810	Equus_caballus
ENSBTAG00000012463	ZMAT3	100	82.007	ENSEEUG00000001126	ZMAT3	100	79.931	Erinaceus_europaeus
ENSBTAG00000012463	ZMAT3	83	68.675	ENSELUG00000010132	zmat3	66	68.273	Esox_lucius
ENSBTAG00000012463	ZMAT3	100	94.118	ENSFCAG00000014578	ZMAT3	100	94.118	Felis_catus
ENSBTAG00000012463	ZMAT3	100	79.655	ENSFALG00000008403	ZMAT3	99	79.239	Ficedula_albicollis
ENSBTAG00000012463	ZMAT3	100	93.080	ENSFDAG00000013376	ZMAT3	100	93.080	Fukomys_damarensis
ENSBTAG00000012463	ZMAT3	98	60.627	ENSFHEG00000003221	zmat3	93	62.687	Fundulus_heteroclitus
ENSBTAG00000012463	ZMAT3	83	68.465	ENSGMOG00000008558	zmat3	99	68.033	Gadus_morhua
ENSBTAG00000012463	ZMAT3	100	80.345	ENSGALG00000040948	ZMAT3	94	85.597	Gallus_gallus
ENSBTAG00000012463	ZMAT3	52	67.763	ENSGAFG00000010485	zmat3	52	68.456	Gambusia_affinis
ENSBTAG00000012463	ZMAT3	80	66.953	ENSGACG00000006175	zmat3	89	66.953	Gasterosteus_aculeatus
ENSBTAG00000012463	ZMAT3	100	78.694	ENSGAGG00000009275	ZMAT3	99	77.320	Gopherus_agassizii
ENSBTAG00000012463	ZMAT3	100	92.734	ENSGGOG00000009975	ZMAT3	100	92.734	Gorilla_gorilla
ENSBTAG00000012463	ZMAT3	99	60.959	ENSHBUG00000004401	zmat3	80	69.697	Haplochromis_burtoni
ENSBTAG00000012463	ZMAT3	100	94.118	ENSHGLG00000011523	ZMAT3	100	94.118	Heterocephalus_glaber_female
ENSBTAG00000012463	ZMAT3	100	94.118	ENSHGLG00100012235	ZMAT3	100	94.118	Heterocephalus_glaber_male
ENSBTAG00000012463	ZMAT3	79	70.044	ENSHCOG00000010624	zmat3	67	68.122	Hippocampus_comes
ENSBTAG00000012463	ZMAT3	93	66.058	ENSIPUG00000003043	zmat3	94	67.954	Ictalurus_punctatus
ENSBTAG00000012463	ZMAT3	100	94.464	ENSSTOG00000028436	ZMAT3	100	94.464	Ictidomys_tridecemlineatus
ENSBTAG00000012463	ZMAT3	100	88.235	ENSJJAG00000004288	Zmat3	100	88.235	Jaculus_jaculus
ENSBTAG00000012463	ZMAT3	80	68.240	ENSKMAG00000008962	zmat3	96	63.296	Kryptolebias_marmoratus
ENSBTAG00000012463	ZMAT3	99	60.884	ENSLBEG00000001993	zmat3	87	64.542	Labrus_bergylta
ENSBTAG00000012463	ZMAT3	96	66.319	ENSLACG00000015780	ZMAT3	73	68.421	Latimeria_chalumnae
ENSBTAG00000012463	ZMAT3	84	72.441	ENSLOCG00000001108	zmat3	69	72.441	Lepisosteus_oculatus
ENSBTAG00000012463	ZMAT3	100	94.810	ENSLAFG00000000897	ZMAT3	100	94.810	Loxodonta_africana
ENSBTAG00000012463	ZMAT3	100	91.696	ENSMFAG00000021292	ZMAT3	100	91.696	Macaca_fascicularis
ENSBTAG00000012463	ZMAT3	100	91.696	ENSMMUG00000003216	ZMAT3	100	91.696	Macaca_mulatta
ENSBTAG00000012463	ZMAT3	100	92.042	ENSMNEG00000036725	ZMAT3	100	92.042	Macaca_nemestrina
ENSBTAG00000012463	ZMAT3	100	91.349	ENSMLEG00000026279	ZMAT3	100	91.349	Mandrillus_leucophaeus
ENSBTAG00000012463	ZMAT3	84	67.355	ENSMAMG00000012349	zmat3	76	67.355	Mastacembelus_armatus
ENSBTAG00000012463	ZMAT3	99	62.414	ENSMZEG00005015427	zmat3	83	67.059	Maylandia_zebra
ENSBTAG00000012463	ZMAT3	100	81.034	ENSMGAG00000009873	ZMAT3	99	80.623	Meleagris_gallopavo
ENSBTAG00000012463	ZMAT3	100	88.927	ENSMAUG00000001986	Zmat3	99	88.927	Mesocricetus_auratus
ENSBTAG00000012463	ZMAT3	100	91.349	ENSMICG00000049501	ZMAT3	100	91.349	Microcebus_murinus
ENSBTAG00000012463	ZMAT3	100	88.927	ENSMOCG00000018844	Zmat3	100	88.927	Microtus_ochrogaster
ENSBTAG00000012463	ZMAT3	86	66.800	ENSMMOG00000001603	zmat3	75	66.800	Mola_mola
ENSBTAG00000012463	ZMAT3	96	75.357	ENSMODG00000021308	ZMAT3	94	75.357	Monodelphis_domestica
ENSBTAG00000012463	ZMAT3	97	60.000	ENSMALG00000019683	zmat3	91	61.852	Monopterus_albus
ENSBTAG00000012463	ZMAT3	100	86.207	MGP_CAROLIEiJ_G0024914	Zmat3	99	85.862	Mus_caroli
ENSBTAG00000012463	ZMAT3	100	86.552	ENSMUSG00000027663	Zmat3	99	86.207	Mus_musculus
ENSBTAG00000012463	ZMAT3	100	85.223	MGP_PahariEiJ_G0026359	Zmat3	99	84.880	Mus_pahari
ENSBTAG00000012463	ZMAT3	100	86.207	MGP_SPRETEiJ_G0025848	Zmat3	99	85.862	Mus_spretus
ENSBTAG00000012463	ZMAT3	100	94.118	ENSMPUG00000017206	ZMAT3	100	94.118	Mustela_putorius_furo
ENSBTAG00000012463	ZMAT3	100	91.753	ENSMLUG00000013074	ZMAT3	100	91.753	Myotis_lucifugus
ENSBTAG00000012463	ZMAT3	100	88.581	ENSNGAG00000023602	Zmat3	99	88.581	Nannospalax_galili
ENSBTAG00000012463	ZMAT3	99	60.959	ENSNBRG00000020886	zmat3	80	69.697	Neolamprologus_brichardi
ENSBTAG00000012463	ZMAT3	100	92.734	ENSNLEG00000005658	ZMAT3	100	92.734	Nomascus_leucogenys
ENSBTAG00000012463	ZMAT3	100	77.320	ENSMEUG00000015724	ZMAT3	100	77.320	Notamacropus_eugenii
ENSBTAG00000012463	ZMAT3	100	92.734	ENSODEG00000003313	ZMAT3	100	92.734	Octodon_degus
ENSBTAG00000012463	ZMAT3	99	59.406	ENSONIG00000008388	zmat3	99	58.278	Oreochromis_niloticus
ENSBTAG00000012463	ZMAT3	76	75.342	ENSOANG00000009901	ZMAT3	84	75.342	Ornithorhynchus_anatinus
ENSBTAG00000012463	ZMAT3	100	92.388	ENSOCUG00000004658	ZMAT3	100	92.388	Oryctolagus_cuniculus
ENSBTAG00000012463	ZMAT3	93	63.636	ENSOMEG00000011303	zmat3	85	64.835	Oryzias_melastigma
ENSBTAG00000012463	ZMAT3	100	92.388	ENSOGAG00000003252	ZMAT3	100	92.388	Otolemur_garnettii
ENSBTAG00000012463	ZMAT3	100	98.616	ENSOARG00000020713	ZMAT3	100	98.616	Ovis_aries
ENSBTAG00000012463	ZMAT3	100	93.080	ENSPPAG00000035483	ZMAT3	100	93.080	Pan_paniscus
ENSBTAG00000012463	ZMAT3	100	94.810	ENSPPRG00000004407	ZMAT3	100	94.810	Panthera_pardus
ENSBTAG00000012463	ZMAT3	100	94.810	ENSPTIG00000009929	ZMAT3	100	94.810	Panthera_tigris_altaica
ENSBTAG00000012463	ZMAT3	100	93.080	ENSPTRG00000015641	ZMAT3	100	93.080	Pan_troglodytes
ENSBTAG00000012463	ZMAT3	100	91.379	ENSPANG00000023167	ZMAT3	100	91.379	Papio_anubis
ENSBTAG00000012463	ZMAT3	81	72.689	ENSPKIG00000023370	zmat3	71	68.939	Paramormyrops_kingsleyae
ENSBTAG00000012463	ZMAT3	100	79.381	ENSPSIG00000014839	ZMAT3	99	78.007	Pelodiscus_sinensis
ENSBTAG00000012463	ZMAT3	97	61.702	ENSPMGG00000023924	zmat3	92	62.452	Periophthalmus_magnuspinnatus
ENSBTAG00000012463	ZMAT3	100	87.543	ENSPEMG00000019154	Zmat3	99	87.543	Peromyscus_maniculatus_bairdii
ENSBTAG00000012463	ZMAT3	80	67.917	ENSPFOG00000019206	zmat3	63	67.500	Poecilia_formosa
ENSBTAG00000012463	ZMAT3	99	62.116	ENSPLAG00000022572	zmat3	91	64.286	Poecilia_latipinna
ENSBTAG00000012463	ZMAT3	99	58.108	ENSPMEG00000004131	-	91	58.824	Poecilia_mexicana
ENSBTAG00000012463	ZMAT3	99	62.116	ENSPREG00000022632	zmat3	89	65.748	Poecilia_reticulata
ENSBTAG00000012463	ZMAT3	100	92.734	ENSPPYG00000014315	ZMAT3	100	92.734	Pongo_abelii
ENSBTAG00000012463	ZMAT3	100	88.966	ENSPCAG00000008585	ZMAT3	100	88.621	Procavia_capensis
ENSBTAG00000012463	ZMAT3	100	91.003	ENSPCOG00000022835	ZMAT3	100	91.003	Propithecus_coquereli
ENSBTAG00000012463	ZMAT3	100	94.118	ENSPVAG00000004489	ZMAT3	100	94.118	Pteropus_vampyrus
ENSBTAG00000012463	ZMAT3	99	60.959	ENSPNYG00000014350	zmat3	80	69.697	Pundamilia_nyererei
ENSBTAG00000012463	ZMAT3	90	68.148	ENSPNAG00000015664	zmat3	76	65.108	Pygocentrus_nattereri
ENSBTAG00000012463	ZMAT3	100	87.197	ENSRNOG00000010119	Zmat3	99	87.197	Rattus_norvegicus
ENSBTAG00000012463	ZMAT3	100	92.388	ENSRBIG00000029622	ZMAT3	100	92.388	Rhinopithecus_bieti
ENSBTAG00000012463	ZMAT3	100	92.388	ENSRROG00000038345	ZMAT3	100	92.388	Rhinopithecus_roxellana
ENSBTAG00000012463	ZMAT3	100	88.927	ENSSBOG00000033332	ZMAT3	100	88.927	Saimiri_boliviensis_boliviensis
ENSBTAG00000012463	ZMAT3	100	76.632	ENSSHAG00000016154	ZMAT3	100	76.632	Sarcophilus_harrisii
ENSBTAG00000012463	ZMAT3	83	72.541	ENSSFOG00015006984	zmat3	83	72.358	Scleropages_formosus
ENSBTAG00000012463	ZMAT3	80	67.083	ENSSMAG00000019540	-	53	66.250	Scophthalmus_maximus
ENSBTAG00000012463	ZMAT3	98	61.168	ENSSDUG00000016188	zmat3	74	64.683	Seriola_dumerili
ENSBTAG00000012463	ZMAT3	98	61.168	ENSSLDG00000018611	zmat3	74	64.683	Seriola_lalandi_dorsalis
ENSBTAG00000012463	ZMAT3	76	89.041	ENSSARG00000004901	ZMAT3	100	89.041	Sorex_araneus
ENSBTAG00000012463	ZMAT3	100	81.661	ENSSPUG00000014753	ZMAT3	99	80.969	Sphenodon_punctatus
ENSBTAG00000012463	ZMAT3	80	69.099	ENSSPAG00000011062	zmat3	71	69.099	Stegastes_partitus
ENSBTAG00000012463	ZMAT3	100	95.156	ENSSSCG00000033860	ZMAT3	100	95.156	Sus_scrofa
ENSBTAG00000012463	ZMAT3	100	79.655	ENSTGUG00000010765	-	99	79.239	Taeniopygia_guttata
ENSBTAG00000012463	ZMAT3	80	69.264	ENSTRUG00000004788	zmat3	88	65.759	Takifugu_rubripes
ENSBTAG00000012463	ZMAT3	83	64.634	ENSTNIG00000006781	zmat3	86	64.228	Tetraodon_nigroviridis
ENSBTAG00000012463	ZMAT3	65	93.671	ENSTBEG00000012359	ZMAT3	99	93.671	Tupaia_belangeri
ENSBTAG00000012463	ZMAT3	100	92.734	ENSTTRG00000004923	ZMAT3	100	92.734	Tursiops_truncatus
ENSBTAG00000012463	ZMAT3	100	93.080	ENSUAMG00000007623	ZMAT3	100	93.080	Ursus_americanus
ENSBTAG00000012463	ZMAT3	100	92.388	ENSUMAG00000007847	ZMAT3	100	92.388	Ursus_maritimus
ENSBTAG00000012463	ZMAT3	100	94.464	ENSVPAG00000006611	ZMAT3	100	94.464	Vicugna_pacos
ENSBTAG00000012463	ZMAT3	100	94.483	ENSVVUG00000004729	ZMAT3	100	94.483	Vulpes_vulpes
ENSBTAG00000012463	ZMAT3	100	65.878	ENSXETG00000007251	zmat3	84	74.089	Xenopus_tropicalis
ENSBTAG00000012463	ZMAT3	99	61.486	ENSXCOG00000008397	zmat3	93	65.517	Xiphophorus_couchianus
ENSBTAG00000012463	ZMAT3	80	66.397	ENSXMAG00000015188	zmat3	50	67.500	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0005886	plasma membrane	-	IEA	Component
GO:0006915	apoptotic process	-	IEA	Process
GO:0006974	cellular response to DNA damage stimulus	-	IEA	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0015031	protein transport	-	IEA	Process
GO:0040008	regulation of growth	-	IEA	Process