EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000012600 (Gene tree)
Gene ID: 100135054
Gene Symbol: GTF3A
Alias: -
Full Name: Bos taurus general transcription factor IIIA (GTF3A)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 9976 bases
Position: chr12:32485688-32495663
Accession: NM_001113572
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000016732	zf-C2H2	PF00096.26	4.8e-31	1	5
ENSBTAP00000016732	zf-C2H2	PF00096.26	4.8e-31	2	5
ENSBTAP00000016732	zf-C2H2	PF00096.26	4.8e-31	3	5
ENSBTAP00000016732	zf-C2H2	PF00096.26	4.8e-31	4	5
ENSBTAP00000016732	zf-C2H2	PF00096.26	4.8e-31	5	5
ENSBTAP00000016732	zf-met	PF12874.7	2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000016732	-	1282	-	ENSBTAP00000016732	357 (aa)	-	F1MUY9

Gene Model

Click here to download ENSBTAG00000012600's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000012600's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000012600	GTF3A	75	32.645	ENSBTAG00000030470	-	70	32.645
ENSBTAG00000012600	GTF3A	83	34.756	ENSBTAG00000050322	-	67	34.826
ENSBTAG00000012600	GTF3A	74	38.095	ENSBTAG00000040358	-	99	38.095
ENSBTAG00000012600	GTF3A	79	33.202	ENSBTAG00000002291	ZBTB41	60	33.077
ENSBTAG00000012600	GTF3A	64	34.127	ENSBTAG00000052323	MAZ	62	31.373
ENSBTAG00000012600	GTF3A	83	34.156	ENSBTAG00000054022	ZNF250	75	38.318
ENSBTAG00000012600	GTF3A	75	36.154	ENSBTAG00000040209	ZNF112	50	36.154
ENSBTAG00000012600	GTF3A	73	35.096	ENSBTAG00000008902	ZNF345	96	36.052
ENSBTAG00000012600	GTF3A	74	36.066	ENSBTAG00000050035	ZNF226	74	36.066
ENSBTAG00000012600	GTF3A	76	31.489	ENSBTAG00000012111	PRDM5	72	31.897
ENSBTAG00000012600	GTF3A	75	34.884	ENSBTAG00000038869	ZNF383	56	34.884
ENSBTAG00000012600	GTF3A	76	32.353	ENSBTAG00000045572	ZNF319	67	31.373
ENSBTAG00000012600	GTF3A	72	39.860	ENSBTAG00000007714	ZNF235	61	39.860
ENSBTAG00000012600	GTF3A	76	33.884	ENSBTAG00000032018	ZNF19	68	33.884
ENSBTAG00000012600	GTF3A	75	36.162	ENSBTAG00000038088	-	89	35.688
ENSBTAG00000012600	GTF3A	76	33.333	ENSBTAG00000038322	-	62	32.967
ENSBTAG00000012600	GTF3A	73	34.733	ENSBTAG00000000868	ZFP1	61	34.733
ENSBTAG00000012600	GTF3A	80	32.281	ENSBTAG00000016077	ZNF317	81	32.432

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000012600	GTF3A	99	82.022	ENSAMEG00000015824	GTF3A	98	82.303	Ailuropoda_melanoleuca
ENSBTAG00000012600	GTF3A	97	81.948	ENSCAFG00000006794	GTF3A	96	81.948	Canis_familiaris
ENSBTAG00000012600	GTF3A	100	96.078	ENSCHIG00000010341	-	100	96.078	Capra_hircus
ENSBTAG00000012600	GTF3A	100	96.919	ENSCHIG00000021040	-	85	96.919	Capra_hircus
ENSBTAG00000012600	GTF3A	91	78.419	ENSTSYG00000004206	GTF3A	96	79.193	Carlito_syrichta
ENSBTAG00000012600	GTF3A	87	81.022	ENSCAPG00000015862	GTF3A	99	79.297	Cavia_aperea
ENSBTAG00000012600	GTF3A	91	78.963	ENSCPOG00000010143	GTF3A	99	79.268	Cavia_porcellus
ENSBTAG00000012600	GTF3A	87	82.109	ENSCLAG00000003912	GTF3A	95	82.428	Chinchilla_lanigera
ENSBTAG00000012600	GTF3A	99	77.159	ENSDNOG00000037405	-	85	76.323	Dasypus_novemcinctus
ENSBTAG00000012600	GTF3A	81	75.385	ENSETEG00000003225	GTF3A	75	75.385	Echinops_telfairi
ENSBTAG00000012600	GTF3A	97	83.333	ENSEASG00005022495	-	78	83.621	Equus_asinus_asinus
ENSBTAG00000012600	GTF3A	90	73.065	ENSEASG00005013216	-	86	73.065	Equus_asinus_asinus
ENSBTAG00000012600	GTF3A	99	82.073	ENSECAG00000014803	GTF3A	85	82.877	Equus_caballus
ENSBTAG00000012600	GTF3A	91	78.154	ENSECAG00000024825	-	75	78.154	Equus_caballus
ENSBTAG00000012600	GTF3A	99	78.933	ENSEEUG00000004307	GTF3A	87	79.494	Erinaceus_europaeus
ENSBTAG00000012600	GTF3A	99	83.989	ENSFCAG00000006982	GTF3A	83	83.989	Felis_catus
ENSBTAG00000012600	GTF3A	87	83.333	ENSFDAG00000016841	GTF3A	96	83.013	Fukomys_damarensis
ENSBTAG00000012600	GTF3A	87	83.601	ENSHGLG00000004173	GTF3A	97	83.280	Heterocephalus_glaber_female
ENSBTAG00000012600	GTF3A	87	83.601	ENSHGLG00100011561	GTF3A	97	83.280	Heterocephalus_glaber_male
ENSBTAG00000012600	GTF3A	87	82.428	ENSSTOG00000013853	GTF3A	100	83.067	Ictidomys_tridecemlineatus
ENSBTAG00000012600	GTF3A	82	80.144	ENSJJAG00000011501	Gtf3a	89	80.144	Jaculus_jaculus
ENSBTAG00000012600	GTF3A	99	74.931	ENSLAFG00000027315	GTF3A	98	74.380	Loxodonta_africana
ENSBTAG00000012600	GTF3A	99	75.698	ENSMAUG00000016253	Gtf3a	95	76.638	Mesocricetus_auratus
ENSBTAG00000012600	GTF3A	99	80.223	ENSMICG00000014763	GTF3A	97	81.337	Microcebus_murinus
ENSBTAG00000012600	GTF3A	95	79.706	MGP_CAROLIEiJ_G0028031	Gtf3a	97	77.711	Mus_caroli
ENSBTAG00000012600	GTF3A	95	79.706	ENSMUSG00000016503	Gtf3a	97	77.711	Mus_musculus
ENSBTAG00000012600	GTF3A	93	79.641	MGP_PahariEiJ_G0024597	Gtf3a	93	78.592	Mus_pahari
ENSBTAG00000012600	GTF3A	98	77.684	MGP_SPRETEiJ_G0029029	Gtf3a	97	77.711	Mus_spretus
ENSBTAG00000012600	GTF3A	99	81.232	ENSMPUG00000005835	GTF3A	97	81.513	Mustela_putorius_furo
ENSBTAG00000012600	GTF3A	92	84.545	ENSMLUG00000002158	GTF3A	99	84.848	Myotis_lucifugus
ENSBTAG00000012600	GTF3A	99	80.168	ENSNLEG00000000331	GTF3A	98	80.168	Nomascus_leucogenys
ENSBTAG00000012600	GTF3A	89	56.698	ENSMEUG00000010089	GTF3A	93	56.698	Notamacropus_eugenii
ENSBTAG00000012600	GTF3A	99	71.469	ENSOPRG00000000854	-	88	71.469	Ochotona_princeps
ENSBTAG00000012600	GTF3A	99	79.050	ENSODEG00000006725	GTF3A	84	79.330	Octodon_degus
ENSBTAG00000012600	GTF3A	99	81.638	ENSOCUG00000011713	GTF3A	81	81.638	Oryctolagus_cuniculus
ENSBTAG00000012600	GTF3A	99	79.666	ENSOGAG00000014589	GTF3A	98	79.944	Otolemur_garnettii
ENSBTAG00000012600	GTF3A	100	91.877	ENSOARG00000012551	GTF3A	98	91.877	Ovis_aries
ENSBTAG00000012600	GTF3A	99	83.708	ENSPPRG00000002368	GTF3A	98	83.708	Panthera_pardus
ENSBTAG00000012600	GTF3A	89	83.505	ENSPTIG00000018958	GTF3A	80	83.505	Panthera_tigris_altaica
ENSBTAG00000012600	GTF3A	82	54.348	ENSPSIG00000011722	GTF3A	84	54.348	Pelodiscus_sinensis
ENSBTAG00000012600	GTF3A	97	79.545	ENSPPYG00000005235	GTF3A	98	79.545	Pongo_abelii
ENSBTAG00000012600	GTF3A	99	77.437	ENSPCOG00000016742	GTF3A	81	78.830	Propithecus_coquereli
ENSBTAG00000012600	GTF3A	99	79.718	ENSPVAG00000012837	GTF3A	84	79.718	Pteropus_vampyrus
ENSBTAG00000012600	GTF3A	99	73.184	ENSRROG00000043264	GTF3A	98	72.905	Rhinopithecus_roxellana
ENSBTAG00000012600	GTF3A	89	75.701	ENSSHAG00000016965	GTF3A	91	75.701	Sarcophilus_harrisii
ENSBTAG00000012600	GTF3A	87	71.383	ENSSARG00000010692	GTF3A	86	71.704	Sorex_araneus
ENSBTAG00000012600	GTF3A	85	69.180	ENSSPUG00000005307	GTF3A	82	69.180	Sphenodon_punctatus
ENSBTAG00000012600	GTF3A	84	45.545	ENSTRUG00000005241	gtf3ab	94	43.769	Takifugu_rubripes
ENSBTAG00000012600	GTF3A	80	83.203	ENSTBEG00000012075	GTF3A	61	83.203	Tupaia_belangeri
ENSBTAG00000012600	GTF3A	99	79.718	ENSTTRG00000008538	GTF3A	86	79.494	Tursiops_truncatus
ENSBTAG00000012600	GTF3A	99	81.742	ENSUAMG00000019189	GTF3A	98	82.022	Ursus_americanus
ENSBTAG00000012600	GTF3A	91	80.243	ENSUMAG00000016941	GTF3A	100	83.056	Ursus_maritimus
ENSBTAG00000012600	GTF3A	89	82.414	ENSVPAG00000004995	GTF3A	97	82.759	Vicugna_pacos
ENSBTAG00000012600	GTF3A	99	80.563	ENSVVUG00000009197	GTF3A	98	80.563	Vulpes_vulpes