EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000012793 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 2726 bases
Position: chr5:65786921-65789646
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000059270	RRM_1	PF00076.22	7.6e-35	1	2
ENSBTAP00000059270	RRM_1	PF00076.22	7.6e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000016998	-	1224	-	ENSBTAP00000059270	407 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000012793's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000012793's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000012793	-	53	40.828	ENSBTAG00000046902	PABPC4L	97	40.828
ENSBTAG00000012793	-	93	96.615	ENSBTAG00000012495	SF3B4	91	96.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000012793	-	93	96.354	ENSG00000143368	SF3B4	100	98.421	Homo_sapiens
ENSBTAG00000012793	-	53	94.860	ENSAPOG00000017647	sf3b4	70	77.133	Acanthochromis_polyacanthus
ENSBTAG00000012793	-	93	96.615	ENSAMEG00000010073	SF3B4	91	96.615	Ailuropoda_melanoleuca
ENSBTAG00000012793	-	53	94.860	ENSAOCG00000019801	sf3b4	70	77.133	Amphiprion_ocellaris
ENSBTAG00000012793	-	53	94.860	ENSAPEG00000010365	sf3b4	70	77.133	Amphiprion_percula
ENSBTAG00000012793	-	53	94.393	ENSATEG00000012844	sf3b4	53	94.393	Anabas_testudineus
ENSBTAG00000012793	-	53	94.931	ENSACAG00000010019	SF3B4	84	88.235	Anolis_carolinensis
ENSBTAG00000012793	-	93	96.354	ENSANAG00000031025	SF3B4	91	96.354	Aotus_nancymaae
ENSBTAG00000012793	-	53	93.925	ENSACLG00000014260	sf3b4	53	93.925	Astatotilapia_calliptera
ENSBTAG00000012793	-	53	94.393	ENSAMXG00000008282	sf3b4	53	94.393	Astyanax_mexicanus
ENSBTAG00000012793	-	87	80.756	ENSCJAG00000042351	SF3B4	85	80.756	Callithrix_jacchus
ENSBTAG00000012793	-	88	98.039	ENSCAFG00000011617	SF3B4	84	98.039	Canis_familiaris
ENSBTAG00000012793	-	88	98.039	ENSCAFG00020019775	SF3B4	84	98.039	Canis_lupus_dingo
ENSBTAG00000012793	-	93	96.615	ENSCHIG00000025663	-	91	96.615	Capra_hircus
ENSBTAG00000012793	-	93	96.354	ENSTSYG00000009295	SF3B4	91	96.354	Carlito_syrichta
ENSBTAG00000012793	-	93	96.354	ENSCPOG00000008267	SF3B4	91	96.354	Cavia_porcellus
ENSBTAG00000012793	-	76	90.291	ENSCCAG00000019823	-	71	90.572	Cebus_capucinus
ENSBTAG00000012793	-	91	83.824	ENSCCAG00000021751	-	63	90.604	Cebus_capucinus
ENSBTAG00000012793	-	93	96.354	ENSCATG00000033114	SF3B4	91	96.354	Cercocebus_atys
ENSBTAG00000012793	-	93	96.354	ENSCLAG00000015851	SF3B4	91	96.354	Chinchilla_lanigera
ENSBTAG00000012793	-	93	96.354	ENSCSAG00000018129	SF3B4	91	96.354	Chlorocebus_sabaeus
ENSBTAG00000012793	-	53	95.392	ENSCPBG00000008041	SF3B4	84	89.106	Chrysemys_picta_bellii
ENSBTAG00000012793	-	93	96.354	ENSCANG00000035579	SF3B4	91	96.354	Colobus_angolensis_palliatus
ENSBTAG00000012793	-	93	96.354	ENSCGRG00001003590	Sf3b4	91	96.354	Cricetulus_griseus_chok1gshd
ENSBTAG00000012793	-	93	96.354	ENSCGRG00000016914	Sf3b4	91	96.354	Cricetulus_griseus_crigri
ENSBTAG00000012793	-	53	94.393	ENSDARG00000018574	sf3b4	54	94.393	Danio_rerio
ENSBTAG00000012793	-	93	96.615	ENSDNOG00000048908	-	92	96.615	Dasypus_novemcinctus
ENSBTAG00000012793	-	93	96.615	ENSDORG00000016366	Sf3b4	91	96.615	Dipodomys_ordii
ENSBTAG00000012793	-	93	86.458	ENSETEG00000008963	SF3B4	91	86.458	Echinops_telfairi
ENSBTAG00000012793	-	93	96.615	ENSEASG00005001477	SF3B4	91	96.615	Equus_asinus_asinus
ENSBTAG00000012793	-	93	96.615	ENSECAG00000024737	SF3B4	91	96.615	Equus_caballus
ENSBTAG00000012793	-	93	96.615	ENSFCAG00000010106	SF3B4	91	96.615	Felis_catus
ENSBTAG00000012793	-	93	96.354	ENSFDAG00000009286	SF3B4	91	96.354	Fukomys_damarensis
ENSBTAG00000012793	-	53	94.931	ENSGALG00000013352	SF3B4	84	88.515	Gallus_gallus
ENSBTAG00000012793	-	60	89.344	ENSGAFG00000010181	sf3b4	51	96.040	Gambusia_affinis
ENSBTAG00000012793	-	53	95.392	ENSGAGG00000025055	SF3B4	74	88.827	Gopherus_agassizii
ENSBTAG00000012793	-	93	96.354	ENSGGOG00000004761	SF3B4	91	96.354	Gorilla_gorilla
ENSBTAG00000012793	-	53	93.925	ENSHBUG00000002028	sf3b4	53	93.925	Haplochromis_burtoni
ENSBTAG00000012793	-	93	96.354	ENSHGLG00000012360	SF3B4	91	96.354	Heterocephalus_glaber_female
ENSBTAG00000012793	-	52	98.571	ENSHGLG00100008533	SF3B4	84	89.356	Heterocephalus_glaber_male
ENSBTAG00000012793	-	53	94.860	ENSIPUG00000012242	Sf3b4	54	94.860	Ictalurus_punctatus
ENSBTAG00000012793	-	93	96.615	ENSSTOG00000000684	-	91	96.615	Ictidomys_tridecemlineatus
ENSBTAG00000012793	-	72	82.759	ENSJJAG00000022500	Sf3b4	92	82.759	Jaculus_jaculus
ENSBTAG00000012793	-	52	94.313	ENSKMAG00000008154	sf3b4	51	96.535	Kryptolebias_marmoratus
ENSBTAG00000012793	-	51	95.652	ENSLBEG00000026818	sf3b4	51	96.535	Labrus_bergylta
ENSBTAG00000012793	-	53	93.548	ENSLACG00000004436	SF3B4	60	93.548	Latimeria_chalumnae
ENSBTAG00000012793	-	53	94.009	ENSLOCG00000009048	sf3b4	68	82.935	Lepisosteus_oculatus
ENSBTAG00000012793	-	93	96.104	ENSLAFG00000008531	SF3B4	91	96.104	Loxodonta_africana
ENSBTAG00000012793	-	93	96.354	ENSMFAG00000042395	SF3B4	91	96.354	Macaca_fascicularis
ENSBTAG00000012793	-	87	72.753	ENSMFAG00000039067	-	54	79.703	Macaca_fascicularis
ENSBTAG00000012793	-	93	96.354	ENSMMUG00000007256	SF3B4	91	96.354	Macaca_mulatta
ENSBTAG00000012793	-	93	96.354	ENSMNEG00000031839	SF3B4	91	96.354	Macaca_nemestrina
ENSBTAG00000012793	-	95	68.123	ENSMNEG00000031526	-	54	79.208	Macaca_nemestrina
ENSBTAG00000012793	-	93	96.354	ENSMLEG00000038667	SF3B4	91	96.354	Mandrillus_leucophaeus
ENSBTAG00000012793	-	53	95.327	ENSMAMG00000014692	sf3b4	54	95.327	Mastacembelus_armatus
ENSBTAG00000012793	-	53	93.925	ENSMZEG00005026741	sf3b4	53	93.925	Maylandia_zebra
ENSBTAG00000012793	-	53	94.931	ENSMGAG00000000653	SF3B4	84	87.395	Meleagris_gallopavo
ENSBTAG00000012793	-	93	96.354	ENSMAUG00000015266	Sf3b4	91	96.354	Mesocricetus_auratus
ENSBTAG00000012793	-	93	96.615	ENSMICG00000044961	SF3B4	91	96.615	Microcebus_murinus
ENSBTAG00000012793	-	91	91.622	ENSMOCG00000014155	-	74	94.966	Microtus_ochrogaster
ENSBTAG00000012793	-	93	96.354	ENSMOCG00000013658	-	91	96.354	Microtus_ochrogaster
ENSBTAG00000012793	-	50	96.078	ENSMMOG00000018032	sf3b4	52	96.040	Mola_mola
ENSBTAG00000012793	-	94	96.335	ENSMODG00000018767	SF3B4	90	96.335	Monodelphis_domestica
ENSBTAG00000012793	-	88	98.039	MGP_CAROLIEiJ_G0025365	Sf3b4	91	96.094	Mus_caroli
ENSBTAG00000012793	-	93	96.354	ENSMUSG00000068856	Sf3b4	91	96.354	Mus_musculus
ENSBTAG00000012793	-	93	96.354	MGP_PahariEiJ_G0026809	Sf3b4	91	96.354	Mus_pahari
ENSBTAG00000012793	-	93	96.354	MGP_SPRETEiJ_G0026309	Sf3b4	91	96.354	Mus_spretus
ENSBTAG00000012793	-	93	96.615	ENSMPUG00000005563	SF3B4	91	96.615	Mustela_putorius_furo
ENSBTAG00000012793	-	93	96.354	ENSMLUG00000010789	SF3B4	91	96.354	Myotis_lucifugus
ENSBTAG00000012793	-	88	98.039	ENSNGAG00000016337	Sf3b4	84	98.039	Nannospalax_galili
ENSBTAG00000012793	-	53	94.393	ENSNBRG00000013865	sf3b4	53	94.393	Neolamprologus_brichardi
ENSBTAG00000012793	-	64	99.099	ENSNLEG00000009693	-	56	99.065	Nomascus_leucogenys
ENSBTAG00000012793	-	87	80.282	ENSNLEG00000000537	-	53	89.524	Nomascus_leucogenys
ENSBTAG00000012793	-	64	99.099	ENSMEUG00000003272	SF3B4	66	99.065	Notamacropus_eugenii
ENSBTAG00000012793	-	88	95.518	ENSOPRG00000010808	SF3B4	84	95.518	Ochotona_princeps
ENSBTAG00000012793	-	52	93.365	ENSONIG00000002730	sf3b4	50	96.040	Oreochromis_niloticus
ENSBTAG00000012793	-	93	96.615	ENSOCUG00000004614	SF3B4	91	96.615	Oryctolagus_cuniculus
ENSBTAG00000012793	-	51	95.146	ENSORLG00000003062	sf3b4	52	96.040	Oryzias_latipes
ENSBTAG00000012793	-	51	95.146	ENSORLG00020000687	sf3b4	51	96.040	Oryzias_latipes_hni
ENSBTAG00000012793	-	51	95.146	ENSORLG00015010989	sf3b4	51	96.040	Oryzias_latipes_hsok
ENSBTAG00000012793	-	93	96.615	ENSOGAG00000006265	SF3B4	91	96.615	Otolemur_garnettii
ENSBTAG00000012793	-	93	96.615	ENSOARG00000020718	-	91	96.615	Ovis_aries
ENSBTAG00000012793	-	84	76.608	ENSOARG00000007368	-	50	81.188	Ovis_aries
ENSBTAG00000012793	-	91	81.622	ENSPPAG00000030024	-	72	81.544	Pan_paniscus
ENSBTAG00000012793	-	93	96.354	ENSPPAG00000040904	SF3B4	91	96.354	Pan_paniscus
ENSBTAG00000012793	-	93	96.615	ENSPPRG00000007384	SF3B4	91	96.615	Panthera_pardus
ENSBTAG00000012793	-	94	96.859	ENSPTIG00000014530	SF3B4	90	96.859	Panthera_tigris_altaica
ENSBTAG00000012793	-	93	96.354	ENSPTRG00000001243	SF3B4	91	96.354	Pan_troglodytes
ENSBTAG00000012793	-	91	78.919	ENSPTRG00000049727	-	52	90.000	Pan_troglodytes
ENSBTAG00000012793	-	93	96.354	ENSPANG00000005126	SF3B4	91	96.354	Papio_anubis
ENSBTAG00000012793	-	51	95.652	ENSPKIG00000020669	sf3b4	54	96.535	Paramormyrops_kingsleyae
ENSBTAG00000012793	-	58	86.017	ENSPSIG00000009565	SF3B4	68	96.757	Pelodiscus_sinensis
ENSBTAG00000012793	-	93	96.354	ENSPEMG00000017568	Sf3b4	91	96.354	Peromyscus_maniculatus_bairdii
ENSBTAG00000012793	-	94	96.335	ENSPCIG00000008765	SF3B4	90	96.335	Phascolarctos_cinereus
ENSBTAG00000012793	-	60	89.024	ENSPFOG00000005754	sf3b4	51	95.545	Poecilia_formosa
ENSBTAG00000012793	-	60	89.024	ENSPLAG00000001401	sf3b4	56	95.545	Poecilia_latipinna
ENSBTAG00000012793	-	60	89.024	ENSPREG00000011076	sf3b4	50	96.040	Poecilia_reticulata
ENSBTAG00000012793	-	93	96.615	ENSPCOG00000015399	SF3B4	91	96.615	Propithecus_coquereli
ENSBTAG00000012793	-	93	96.615	ENSPVAG00000014171	SF3B4	91	96.615	Pteropus_vampyrus
ENSBTAG00000012793	-	53	93.925	ENSPNYG00000012700	sf3b4	53	93.925	Pundamilia_nyererei
ENSBTAG00000012793	-	53	94.860	ENSPNAG00000000686	sf3b4	55	94.860	Pygocentrus_nattereri
ENSBTAG00000012793	-	93	96.354	ENSRNOG00000021181	Sf3b4	91	96.354	Rattus_norvegicus
ENSBTAG00000012793	-	93	96.354	ENSRBIG00000043392	SF3B4	91	96.354	Rhinopithecus_bieti
ENSBTAG00000012793	-	93	96.354	ENSRROG00000029366	SF3B4	91	96.354	Rhinopithecus_roxellana
ENSBTAG00000012793	-	91	69.355	ENSRROG00000028213	-	51	74.384	Rhinopithecus_roxellana
ENSBTAG00000012793	-	85	78.261	ENSSBOG00000025174	-	70	80.339	Saimiri_boliviensis_boliviensis
ENSBTAG00000012793	-	88	98.039	ENSSBOG00000012310	-	91	96.094	Saimiri_boliviensis_boliviensis
ENSBTAG00000012793	-	88	98.039	ENSSHAG00000004043	SF3B4	89	97.941	Sarcophilus_harrisii
ENSBTAG00000012793	-	52	94.787	ENSSFOG00015008864	sf3b4	50	96.535	Scleropages_formosus
ENSBTAG00000012793	-	53	94.860	ENSSMAG00000006837	sf3b4	54	94.860	Scophthalmus_maximus
ENSBTAG00000012793	-	53	95.327	ENSSDUG00000012064	sf3b4	53	95.327	Seriola_dumerili
ENSBTAG00000012793	-	53	95.327	ENSSLDG00000014226	sf3b4	53	95.327	Seriola_lalandi_dorsalis
ENSBTAG00000012793	-	54	93.151	ENSSPUG00000001028	SF3B4	51	97.030	Sphenodon_punctatus
ENSBTAG00000012793	-	53	95.794	ENSSPAG00000019219	sf3b4	53	95.794	Stegastes_partitus
ENSBTAG00000012793	-	93	96.354	ENSSSCG00000006665	-	91	96.354	Sus_scrofa
ENSBTAG00000012793	-	82	65.075	ENSSSCG00000039440	-	70	64.094	Sus_scrofa
ENSBTAG00000012793	-	52	95.238	ENSTGUG00000004470	SF3B4	80	96.535	Taeniopygia_guttata
ENSBTAG00000012793	-	93	96.615	ENSTTRG00000005217	SF3B4	91	96.615	Tursiops_truncatus
ENSBTAG00000012793	-	93	96.615	ENSUAMG00000022468	SF3B4	91	96.615	Ursus_americanus
ENSBTAG00000012793	-	93	96.335	ENSUMAG00000003802	SF3B4	91	96.335	Ursus_maritimus
ENSBTAG00000012793	-	93	96.615	ENSVPAG00000008152	SF3B4	93	96.615	Vicugna_pacos
ENSBTAG00000012793	-	72	97.952	ENSVVUG00000007732	-	84	90.196	Vulpes_vulpes
ENSBTAG00000012793	-	50	95.588	ENSXCOG00000019895	sf3b4	52	96.040	Xiphophorus_couchianus
ENSBTAG00000012793	-	50	95.588	ENSXMAG00000003772	sf3b4	52	96.040	Xiphophorus_maculatus