EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000012852 (Gene tree)
Gene ID: 337871
Gene Symbol: DICER1
Alias: -
Full Name: Bos taurus dicer 1%2C ribonuclease III (DICER1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 71031 bases
Position: chr21:59956298-60027328
Accession: NM_203359
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000056944	Ribonuclease_3	PF00636.26	1.3e-69	1	2
ENSBTAP00000056944	Ribonuclease_3	PF00636.26	1.3e-69	2	2
ENSBTAP00000068918	Ribonuclease_3	PF00636.26	1.3e-69	1	2
ENSBTAP00000068918	Ribonuclease_3	PF00636.26	1.3e-69	2	2
ENSBTAP00000017080	Ribonuclease_3	PF00636.26	1.4e-69	1	2
ENSBTAP00000017080	Ribonuclease_3	PF00636.26	1.4e-69	2	2
ENSBTAP00000017080	PAZ	PF02170.22	1.3e-39	1	1
ENSBTAP00000056944	PAZ	PF02170.22	2.1e-39	1	1
ENSBTAP00000068918	PAZ	PF02170.22	2.1e-39	1	1
ENSBTAP00000056944	Ribonucleas_3_3	PF14622.6	8.7e-25	1	1
ENSBTAP00000068918	Ribonucleas_3_3	PF14622.6	8.8e-25	1	1
ENSBTAP00000017080	Ribonucleas_3_3	PF14622.6	9.4e-25	1	1
ENSBTAP00000017080	ResIII	PF04851.15	7.6e-12	1	1
ENSBTAP00000068918	ResIII	PF04851.15	5.7e-11	1	1
ENSBTAP00000056944	ResIII	PF04851.15	1.3e-10	1	1
ENSBTAP00000017080	DEAD	PF00270.29	5.1e-12	1	1
ENSBTAP00000056944	DEAD	PF00270.29	1.3e-11	1	1
ENSBTAP00000068918	DEAD	PF00270.29	3.9e-11	1	1
ENSBTAP00000017080	Dicer_dimer	PF03368.14	1.1e-23	1	1
ENSBTAP00000056944	Dicer_dimer	PF03368.14	1.4e-23	1	1
ENSBTAP00000068918	Dicer_dimer	PF03368.14	1.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000017080	-	6168	XM_010817208	ENSBTAP00000017080	1922 (aa)	XP_010815510	F1MCQ5
ENSBTAT00000081075	-	5979	-	ENSBTAP00000068918	1892 (aa)	-	-
ENSBTAT00000080920	-	5850	-	ENSBTAP00000056944	1886 (aa)	-	UPI0009535893

Gene Model

Click here to download ENSBTAG00000012852's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta05206	MicroRNAs in cancer	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000012852's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000012852	DICER1	100	96.360	ENSG00000100697	DICER1	100	100.000	Homo_sapiens
ENSBTAG00000012852	DICER1	99	76.525	ENSAPOG00000020381	dicer1	100	76.732	Acanthochromis_polyacanthus
ENSBTAG00000012852	DICER1	100	96.672	ENSAMEG00000006447	DICER1	100	96.672	Ailuropoda_melanoleuca
ENSBTAG00000012852	DICER1	95	77.305	ENSACIG00000000890	dicer1	99	77.305	Amphilophus_citrinellus
ENSBTAG00000012852	DICER1	99	76.022	ENSAOCG00000023381	dicer1	100	76.074	Amphiprion_ocellaris
ENSBTAG00000012852	DICER1	99	75.869	ENSAPEG00000022809	dicer1	100	75.920	Amphiprion_percula
ENSBTAG00000012852	DICER1	99	76.591	ENSATEG00000014048	dicer1	100	76.489	Anabas_testudineus
ENSBTAG00000012852	DICER1	100	91.598	ENSAPLG00000012407	DICER1	100	91.546	Anas_platyrhynchos
ENSBTAG00000012852	DICER1	100	88.976	ENSACAG00000013033	DICER1	100	88.924	Anolis_carolinensis
ENSBTAG00000012852	DICER1	100	96.204	ENSANAG00000023622	DICER1	100	96.204	Aotus_nancymaae
ENSBTAG00000012852	DICER1	99	76.603	ENSACLG00000007920	dicer1	100	76.449	Astatotilapia_calliptera
ENSBTAG00000012852	DICER1	99	78.464	ENSAMXG00000010730	dicer1	100	78.527	Astyanax_mexicanus
ENSBTAG00000012852	DICER1	82	56.637	WBGene00000939	dcr-1	79	56.637	Caenorhabditis_elegans
ENSBTAG00000012852	DICER1	100	96.152	ENSCJAG00000006225	DICER1	100	96.152	Callithrix_jacchus
ENSBTAG00000012852	DICER1	100	97.192	ENSCAFG00000017701	DICER1	100	97.192	Canis_familiaris
ENSBTAG00000012852	DICER1	100	97.192	ENSCAFG00020014247	DICER1	100	97.192	Canis_lupus_dingo
ENSBTAG00000012852	DICER1	100	99.272	ENSCHIG00000015885	DICER1	100	99.272	Capra_hircus
ENSBTAG00000012852	DICER1	100	87.370	ENSTSYG00000002044	DICER1	100	87.422	Carlito_syrichta
ENSBTAG00000012852	DICER1	98	91.100	ENSCAPG00000000101	DICER1	98	91.100	Cavia_aperea
ENSBTAG00000012852	DICER1	100	94.956	ENSCPOG00000004221	DICER1	100	94.956	Cavia_porcellus
ENSBTAG00000012852	DICER1	100	96.204	ENSCCAG00000027063	DICER1	100	96.204	Cebus_capucinus
ENSBTAG00000012852	DICER1	100	96.152	ENSCATG00000031403	DICER1	100	96.152	Cercocebus_atys
ENSBTAG00000012852	DICER1	100	95.268	ENSCLAG00000015000	DICER1	100	95.164	Chinchilla_lanigera
ENSBTAG00000012852	DICER1	100	96.152	ENSCSAG00000010696	DICER1	100	96.152	Chlorocebus_sabaeus
ENSBTAG00000012852	DICER1	79	92.564	ENSCHOG00000002136	DICER1	90	92.564	Choloepus_hoffmanni
ENSBTAG00000012852	DICER1	100	91.680	ENSCPBG00000009859	DICER1	100	94.545	Chrysemys_picta_bellii
ENSBTAG00000012852	DICER1	53	79.592	ENSCSAVG00000006137	-	86	79.592	Ciona_savignyi
ENSBTAG00000012852	DICER1	100	96.256	ENSCANG00000031429	DICER1	100	96.256	Colobus_angolensis_palliatus
ENSBTAG00000012852	DICER1	100	94.020	ENSCGRG00001008088	Dicer1	100	93.968	Cricetulus_griseus_chok1gshd
ENSBTAG00000012852	DICER1	100	94.020	ENSCGRG00000012281	Dicer1	100	93.968	Cricetulus_griseus_crigri
ENSBTAG00000012852	DICER1	99	75.765	ENSCSEG00000017078	dicer1	100	75.817	Cynoglossus_semilaevis
ENSBTAG00000012852	DICER1	99	76.501	ENSCVAG00000020035	dicer1	99	76.446	Cyprinodon_variegatus
ENSBTAG00000012852	DICER1	99	79.054	ENSDARG00000001129	dicer1	100	79.106	Danio_rerio
ENSBTAG00000012852	DICER1	100	92.510	ENSDNOG00000004190	DICER1	100	92.820	Dasypus_novemcinctus
ENSBTAG00000012852	DICER1	100	93.247	ENSDORG00000006215	Dicer1	100	93.247	Dipodomys_ordii
ENSBTAG00000012852	DICER1	82	63.918	FBgn0039016	Dcr-1	73	63.918	Drosophila_melanogaster
ENSBTAG00000012852	DICER1	91	96.018	ENSETEG00000011000	DICER1	100	97.309	Echinops_telfairi
ENSBTAG00000012852	DICER1	96	65.652	ENSEBUG00000013802	dicer1	91	66.523	Eptatretus_burgeri
ENSBTAG00000012852	DICER1	100	95.736	ENSEASG00005021485	DICER1	100	95.736	Equus_asinus_asinus
ENSBTAG00000012852	DICER1	100	95.721	ENSECAG00000006079	DICER1	100	98.630	Equus_caballus
ENSBTAG00000012852	DICER1	56	97.761	ENSEEUG00000003893	-	55	97.761	Erinaceus_europaeus
ENSBTAG00000012852	DICER1	99	75.692	ENSELUG00000024317	dicer1	100	75.692	Esox_lucius
ENSBTAG00000012852	DICER1	99	96.320	ENSFCAG00000003535	DICER1	99	96.306	Felis_catus
ENSBTAG00000012852	DICER1	100	91.628	ENSFALG00000002516	DICER1	100	91.576	Ficedula_albicollis
ENSBTAG00000012852	DICER1	100	95.164	ENSFDAG00000021287	DICER1	100	95.164	Fukomys_damarensis
ENSBTAG00000012852	DICER1	92	82.379	ENSFHEG00000016839	dicer1	99	72.222	Fundulus_heteroclitus
ENSBTAG00000012852	DICER1	89	81.387	ENSGMOG00000006057	dicer1	91	81.475	Gadus_morhua
ENSBTAG00000012852	DICER1	100	91.420	ENSGALG00000010999	DICER1	99	97.251	Gallus_gallus
ENSBTAG00000012852	DICER1	99	76.230	ENSGAFG00000010728	dicer1	99	76.282	Gambusia_affinis
ENSBTAG00000012852	DICER1	99	75.568	ENSGACG00000020134	dicer1	99	75.684	Gasterosteus_aculeatus
ENSBTAG00000012852	DICER1	65	90.140	ENSGAGG00000016379	DICER1	99	89.975	Gopherus_agassizii
ENSBTAG00000012852	DICER1	100	96.308	ENSGGOG00000003760	DICER1	100	96.308	Gorilla_gorilla
ENSBTAG00000012852	DICER1	99	76.655	ENSHBUG00000018941	dicer1	100	76.501	Haplochromis_burtoni
ENSBTAG00000012852	DICER1	100	95.320	ENSHGLG00000018124	DICER1	100	95.216	Heterocephalus_glaber_female
ENSBTAG00000012852	DICER1	100	95.320	ENSHGLG00100010985	DICER1	100	95.216	Heterocephalus_glaber_male
ENSBTAG00000012852	DICER1	99	76.178	ENSHCOG00000015738	dicer1	100	75.971	Hippocampus_comes
ENSBTAG00000012852	DICER1	99	76.431	ENSIPUG00000005080	dicer1	100	76.531	Ictalurus_punctatus
ENSBTAG00000012852	DICER1	99	96.027	ENSSTOG00000022439	DICER1	100	96.027	Ictidomys_tridecemlineatus
ENSBTAG00000012852	DICER1	100	92.723	ENSJJAG00000010766	Dicer1	100	92.723	Jaculus_jaculus
ENSBTAG00000012852	DICER1	91	96.413	ENSKMAG00000001429	dicer1	100	96.413	Kryptolebias_marmoratus
ENSBTAG00000012852	DICER1	99	75.920	ENSLBEG00000008928	dicer1	100	75.996	Labrus_bergylta
ENSBTAG00000012852	DICER1	100	84.224	ENSLACG00000008302	DICER1	100	84.224	Latimeria_chalumnae
ENSBTAG00000012852	DICER1	99	81.405	ENSLOCG00000008544	dicer1	99	81.447	Lepisosteus_oculatus
ENSBTAG00000012852	DICER1	99	95.509	ENSLAFG00000013632	DICER1	100	95.509	Loxodonta_africana
ENSBTAG00000012852	DICER1	100	96.256	ENSMFAG00000002987	DICER1	100	96.256	Macaca_fascicularis
ENSBTAG00000012852	DICER1	100	96.256	ENSMMUG00000023305	DICER1	100	96.256	Macaca_mulatta
ENSBTAG00000012852	DICER1	100	96.204	ENSMNEG00000021073	DICER1	100	96.204	Macaca_nemestrina
ENSBTAG00000012852	DICER1	100	96.152	ENSMLEG00000034800	DICER1	100	96.152	Mandrillus_leucophaeus
ENSBTAG00000012852	DICER1	99	76.317	ENSMAMG00000016806	dicer1	100	76.033	Mastacembelus_armatus
ENSBTAG00000012852	DICER1	99	76.603	ENSMZEG00005016989	dicer1	100	76.449	Maylandia_zebra
ENSBTAG00000012852	DICER1	100	91.225	ENSMGAG00000013207	DICER1	100	91.225	Meleagris_gallopavo
ENSBTAG00000012852	DICER1	100	93.760	ENSMAUG00000009936	Dicer1	100	93.864	Mesocricetus_auratus
ENSBTAG00000012852	DICER1	100	96.256	ENSMICG00000011690	DICER1	100	96.308	Microcebus_murinus
ENSBTAG00000012852	DICER1	100	93.812	ENSMOCG00000018636	Dicer1	100	93.968	Microtus_ochrogaster
ENSBTAG00000012852	DICER1	99	75.880	ENSMMOG00000018531	dicer1	100	75.880	Mola_mola
ENSBTAG00000012852	DICER1	100	92.887	ENSMODG00000012624	DICER1	100	92.887	Monodelphis_domestica
ENSBTAG00000012852	DICER1	99	76.781	ENSMALG00000009445	dicer1	100	76.781	Monopterus_albus
ENSBTAG00000012852	DICER1	99	92.838	ENSMUSG00000041415	Dicer1	100	92.838	Mus_musculus
ENSBTAG00000012852	DICER1	99	96.498	ENSMPUG00000003130	DICER1	100	96.498	Mustela_putorius_furo
ENSBTAG00000012852	DICER1	100	94.496	ENSMLUG00000003991	DICER1	100	94.756	Myotis_lucifugus
ENSBTAG00000012852	DICER1	100	93.344	ENSNGAG00000010103	Dicer1	100	93.396	Nannospalax_galili
ENSBTAG00000012852	DICER1	99	74.829	ENSNBRG00000022306	dicer1	97	74.671	Neolamprologus_brichardi
ENSBTAG00000012852	DICER1	100	96.204	ENSNLEG00000017309	DICER1	100	96.204	Nomascus_leucogenys
ENSBTAG00000012852	DICER1	70	98.052	ENSMEUG00000000614	-	74	98.052	Notamacropus_eugenii
ENSBTAG00000012852	DICER1	96	96.970	ENSOPRG00000014698	DICER1	96	96.970	Ochotona_princeps
ENSBTAG00000012852	DICER1	100	95.174	ENSODEG00000008594	DICER1	100	95.226	Octodon_degus
ENSBTAG00000012852	DICER1	99	77.191	ENSONIG00000010424	dicer1	99	77.037	Oreochromis_niloticus
ENSBTAG00000012852	DICER1	100	91.576	ENSOANG00000012034	DICER1	100	91.524	Ornithorhynchus_anatinus
ENSBTAG00000012852	DICER1	100	91.088	ENSOCUG00000010849	DICER1	100	91.451	Oryctolagus_cuniculus
ENSBTAG00000012852	DICER1	65	79.826	ENSORLG00000011022	dicer1	98	79.826	Oryzias_latipes
ENSBTAG00000012852	DICER1	99	76.095	ENSORLG00020021795	dicer1	98	80.000	Oryzias_latipes_hni
ENSBTAG00000012852	DICER1	57	83.865	ENSORLG00015019667	dicer1	100	76.159	Oryzias_latipes_hsok
ENSBTAG00000012852	DICER1	99	76.033	ENSOMEG00000018679	dicer1	100	76.195	Oryzias_melastigma
ENSBTAG00000012852	DICER1	93	95.318	ENSOGAG00000010719	DICER1	98	95.429	Otolemur_garnettii
ENSBTAG00000012852	DICER1	100	99.168	ENSOARG00000015465	DICER1	100	99.168	Ovis_aries
ENSBTAG00000012852	DICER1	100	96.308	ENSPPAG00000035143	DICER1	100	96.308	Pan_paniscus
ENSBTAG00000012852	DICER1	99	96.094	ENSPPRG00000001322	DICER1	99	96.094	Panthera_pardus
ENSBTAG00000012852	DICER1	99	95.990	ENSPTIG00000008215	DICER1	99	95.990	Panthera_tigris_altaica
ENSBTAG00000012852	DICER1	100	96.308	ENSPTRG00000023484	DICER1	100	96.308	Pan_troglodytes
ENSBTAG00000012852	DICER1	100	96.204	ENSPANG00000023078	DICER1	100	96.204	Papio_anubis
ENSBTAG00000012852	DICER1	100	78.191	ENSPKIG00000019962	dicer1	99	77.984	Paramormyrops_kingsleyae
ENSBTAG00000012852	DICER1	100	90.224	ENSPSIG00000010801	DICER1	100	90.172	Pelodiscus_sinensis
ENSBTAG00000012852	DICER1	99	76.334	ENSPMGG00000010210	dicer1	100	76.772	Periophthalmus_magnuspinnatus
ENSBTAG00000012852	DICER1	100	93.812	ENSPEMG00000014125	Dicer1	100	93.812	Peromyscus_maniculatus_bairdii
ENSBTAG00000012852	DICER1	100	92.883	ENSPCIG00000018004	DICER1	100	92.883	Phascolarctos_cinereus
ENSBTAG00000012852	DICER1	99	76.951	ENSPFOG00000008531	dicer1	99	77.003	Poecilia_formosa
ENSBTAG00000012852	DICER1	99	76.796	ENSPLAG00000008539	dicer1	99	76.848	Poecilia_latipinna
ENSBTAG00000012852	DICER1	99	76.796	ENSPMEG00000014284	dicer1	99	76.848	Poecilia_mexicana
ENSBTAG00000012852	DICER1	99	76.577	ENSPREG00000012120	dicer1	99	76.525	Poecilia_reticulata
ENSBTAG00000012852	DICER1	100	96.204	ENSPPYG00000006112	DICER1	100	96.204	Pongo_abelii
ENSBTAG00000012852	DICER1	85	93.345	ENSPCAG00000010828	DICER1	85	93.345	Procavia_capensis
ENSBTAG00000012852	DICER1	100	96.412	ENSPCOG00000022909	DICER1	100	96.412	Propithecus_coquereli
ENSBTAG00000012852	DICER1	99	88.587	ENSPVAG00000004811	DICER1	100	88.533	Pteropus_vampyrus
ENSBTAG00000012852	DICER1	99	76.757	ENSPNYG00000017939	dicer1	100	76.603	Pundamilia_nyererei
ENSBTAG00000012852	DICER1	99	79.368	ENSPNAG00000001012	dicer1	100	79.492	Pygocentrus_nattereri
ENSBTAG00000012852	DICER1	100	93.084	ENSRNOG00000010711	Dicer1	100	92.980	Rattus_norvegicus
ENSBTAG00000012852	DICER1	100	96.308	ENSRBIG00000020932	DICER1	100	96.308	Rhinopithecus_bieti
ENSBTAG00000012852	DICER1	100	96.204	ENSRROG00000031891	DICER1	100	96.204	Rhinopithecus_roxellana
ENSBTAG00000012852	DICER1	100	96.256	ENSSBOG00000028660	DICER1	100	96.256	Saimiri_boliviensis_boliviensis
ENSBTAG00000012852	DICER1	100	92.831	ENSSHAG00000012077	DICER1	100	92.831	Sarcophilus_harrisii
ENSBTAG00000012852	DICER1	100	78.594	ENSSFOG00015010804	dicer1	99	84.032	Scleropages_formosus
ENSBTAG00000012852	DICER1	99	76.308	ENSSMAG00000015520	dicer1	100	76.359	Scophthalmus_maximus
ENSBTAG00000012852	DICER1	99	76.675	ENSSDUG00000021652	dicer1	100	76.573	Seriola_dumerili
ENSBTAG00000012852	DICER1	99	73.709	ENSSLDG00000012087	dicer1	100	73.760	Seriola_lalandi_dorsalis
ENSBTAG00000012852	DICER1	61	92.857	ENSSARG00000000219	-	61	93.088	Sorex_araneus
ENSBTAG00000012852	DICER1	100	91.472	ENSSPUG00000016222	DICER1	100	91.420	Sphenodon_punctatus
ENSBTAG00000012852	DICER1	99	76.263	ENSSPAG00000017128	dicer1	100	76.212	Stegastes_partitus
ENSBTAG00000012852	DICER1	100	94.332	ENSSSCG00000028225	DICER1	100	94.332	Sus_scrofa
ENSBTAG00000012852	DICER1	100	91.472	ENSTGUG00000012658	DICER1	100	91.420	Taeniopygia_guttata
ENSBTAG00000012852	DICER1	99	75.532	ENSTRUG00000006156	dicer1	100	75.674	Takifugu_rubripes
ENSBTAG00000012852	DICER1	99	75.089	ENSTNIG00000005441	dicer1	99	75.128	Tetraodon_nigroviridis
ENSBTAG00000012852	DICER1	96	88.413	ENSTBEG00000012374	DICER1	100	88.468	Tupaia_belangeri
ENSBTAG00000012852	DICER1	95	100.000	ENSTTRG00000013044	DICER1	95	100.000	Tursiops_truncatus
ENSBTAG00000012852	DICER1	97	96.790	ENSUAMG00000011912	DICER1	99	96.790	Ursus_americanus
ENSBTAG00000012852	DICER1	100	96.152	ENSUMAG00000003027	DICER1	100	96.152	Ursus_maritimus
ENSBTAG00000012852	DICER1	95	94.111	ENSVPAG00000006817	DICER1	95	94.111	Vicugna_pacos
ENSBTAG00000012852	DICER1	100	97.244	ENSVVUG00000018855	DICER1	100	97.244	Vulpes_vulpes
ENSBTAG00000012852	DICER1	99	82.292	ENSXETG00000023315	dicer1	99	82.708	Xenopus_tropicalis
ENSBTAG00000012852	DICER1	93	95.982	ENSXCOG00000009353	dicer1	99	95.982	Xiphophorus_couchianus
ENSBTAG00000012852	DICER1	99	76.525	ENSXMAG00000015721	dicer1	99	76.419	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0030422	production of siRNA involved in RNA interference	-	ISS	Process
GO:0030423	targeting of mRNA for destruction involved in RNA interference	-	ISS	Process
GO:0031054	pre-miRNA processing	-	ISS	Process
GO:0035068	micro-ribonucleoprotein complex	-	ISS	Component
GO:0046872	metal ion binding	-	IEA	Function
GO:0070578	RISC-loading complex	-	ISS	Component
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	-	IEA	Process