EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000012878 (Gene tree)
Gene ID: 514945
Gene Symbol: BMS1
Alias: -
Full Name: Bos taurus BMS1%2C ribosome biogenesis factor (BMS1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 32185 bases
Position: chr28:13197801-13229985
Accession: NM_001206147
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000045796	AARP2CN	PF08142.12	1.6e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000048816	-	4577	XM_005226257	ENSBTAP00000045796	1284 (aa)	XP_005226314	E1BPP2

Gene Model

Click here to download ENSBTAG00000012878's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000012878's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000012878	BMS1	100	89.097	ENSG00000165733	BMS1	100	89.019	Homo_sapiens
ENSBTAG00000012878	BMS1	70	73.776	ENSAPOG00000002296	bms1	99	59.672	Acanthochromis_polyacanthus
ENSBTAG00000012878	BMS1	99	91.078	ENSAMEG00000016834	BMS1	99	90.606	Ailuropoda_melanoleuca
ENSBTAG00000012878	BMS1	76	81.199	ENSACIG00000002588	bms1	85	78.500	Amphilophus_citrinellus
ENSBTAG00000012878	BMS1	86	69.368	ENSAOCG00000018088	bms1	99	62.173	Amphiprion_ocellaris
ENSBTAG00000012878	BMS1	84	70.213	ENSAPEG00000014673	bms1	99	61.989	Amphiprion_percula
ENSBTAG00000012878	BMS1	81	74.537	ENSATEG00000023465	bms1	56	62.963	Anabas_testudineus
ENSBTAG00000012878	BMS1	95	73.102	ENSAPLG00000003759	BMS1	100	72.705	Anas_platyrhynchos
ENSBTAG00000012878	BMS1	100	70.696	ENSACAG00000004537	-	100	70.884	Anolis_carolinensis
ENSBTAG00000012878	BMS1	100	88.267	ENSANAG00000023432	BMS1	100	88.034	Aotus_nancymaae
ENSBTAG00000012878	BMS1	87	69.495	ENSACLG00000001294	bms1	99	60.725	Astatotilapia_calliptera
ENSBTAG00000012878	BMS1	81	52.670	WBGene00022021	Y61A9LA.10	99	52.482	Caenorhabditis_elegans
ENSBTAG00000012878	BMS1	100	88.345	ENSCJAG00000021705	BMS1	100	88.190	Callithrix_jacchus
ENSBTAG00000012878	BMS1	99	91.128	ENSCAFG00000007114	BMS1	99	90.654	Canis_familiaris
ENSBTAG00000012878	BMS1	99	91.128	ENSCAFG00020025282	BMS1	99	90.654	Canis_lupus_dingo
ENSBTAG00000012878	BMS1	100	98.289	ENSCHIG00000023251	BMS1	100	98.289	Capra_hircus
ENSBTAG00000012878	BMS1	99	82.500	ENSCAPG00000008652	BMS1	99	81.875	Cavia_aperea
ENSBTAG00000012878	BMS1	99	86.641	ENSCPOG00000000502	BMS1	99	86.016	Cavia_porcellus
ENSBTAG00000012878	BMS1	100	73.872	ENSCCAG00000024969	-	100	73.639	Cebus_capucinus
ENSBTAG00000012878	BMS1	100	89.494	ENSCATG00000030625	-	100	89.183	Cercocebus_atys
ENSBTAG00000012878	BMS1	90	66.956	ENSCATG00000008695	-	97	66.811	Cercocebus_atys
ENSBTAG00000012878	BMS1	99	86.573	ENSCLAG00000002446	BMS1	99	85.636	Chinchilla_lanigera
ENSBTAG00000012878	BMS1	100	89.805	ENSCSAG00000011118	BMS1	100	89.494	Chlorocebus_sabaeus
ENSBTAG00000012878	BMS1	100	87.490	ENSCHOG00000011055	BMS1	100	88.423	Choloepus_hoffmanni
ENSBTAG00000012878	BMS1	99	74.040	ENSCPBG00000025581	BMS1	99	73.178	Chrysemys_picta_bellii
ENSBTAG00000012878	BMS1	78	59.322	ENSCING00000003181	-	99	59.322	Ciona_intestinalis
ENSBTAG00000012878	BMS1	67	56.145	ENSCSAVG00000004113	-	84	60.057	Ciona_savignyi
ENSBTAG00000012878	BMS1	100	90.272	ENSCANG00000011609	BMS1	100	89.572	Colobus_angolensis_palliatus
ENSBTAG00000012878	BMS1	99	85.392	ENSCGRG00001019461	Bms1	99	85.392	Cricetulus_griseus_chok1gshd
ENSBTAG00000012878	BMS1	99	85.392	ENSCGRG00000009016	Bms1	99	85.392	Cricetulus_griseus_crigri
ENSBTAG00000012878	BMS1	81	73.709	ENSCSEG00000002469	bms1	99	61.923	Cynoglossus_semilaevis
ENSBTAG00000012878	BMS1	85	69.375	ENSCVAG00000008371	bms1	99	68.726	Cyprinodon_variegatus
ENSBTAG00000012878	BMS1	88	67.987	ENSDARG00000054154	bms1	99	62.229	Danio_rerio
ENSBTAG00000012878	BMS1	100	89.869	ENSDNOG00000015761	BMS1	100	90.101	Dasypus_novemcinctus
ENSBTAG00000012878	BMS1	99	87.305	ENSDORG00000002982	Bms1	99	86.994	Dipodomys_ordii
ENSBTAG00000012878	BMS1	75	60.800	FBgn0036686	CG7728	90	58.924	Drosophila_melanogaster
ENSBTAG00000012878	BMS1	85	83.036	ENSETEG00000009554	BMS1	91	83.036	Echinops_telfairi
ENSBTAG00000012878	BMS1	100	91.531	ENSEASG00005006894	BMS1	100	91.919	Equus_asinus_asinus
ENSBTAG00000012878	BMS1	100	92.003	ENSECAG00000001358	BMS1	100	91.919	Equus_caballus
ENSBTAG00000012878	BMS1	89	66.603	ENSELUG00000001756	bms1	94	67.483	Esox_lucius
ENSBTAG00000012878	BMS1	99	91.355	ENSFCAG00000011220	BMS1	99	90.966	Felis_catus
ENSBTAG00000012878	BMS1	99	71.059	ENSFALG00000006882	BMS1	99	71.646	Ficedula_albicollis
ENSBTAG00000012878	BMS1	99	85.070	ENSFDAG00000001422	BMS1	99	85.012	Fukomys_damarensis
ENSBTAG00000012878	BMS1	85	71.130	ENSFHEG00000003367	bms1	99	68.130	Fundulus_heteroclitus
ENSBTAG00000012878	BMS1	89	66.238	ENSGMOG00000000718	bms1	96	66.126	Gadus_morhua
ENSBTAG00000012878	BMS1	100	72.184	ENSGALG00000002624	BMS1	99	72.769	Gallus_gallus
ENSBTAG00000012878	BMS1	99	59.653	ENSGACG00000015334	bms1	99	60.321	Gasterosteus_aculeatus
ENSBTAG00000012878	BMS1	100	73.798	ENSGAGG00000003467	BMS1	100	72.692	Gopherus_agassizii
ENSBTAG00000012878	BMS1	86	69.076	ENSHBUG00000022628	bms1	54	67.079	Haplochromis_burtoni
ENSBTAG00000012878	BMS1	99	85.848	ENSHGLG00000000477	BMS1	99	84.676	Heterocephalus_glaber_female
ENSBTAG00000012878	BMS1	99	85.927	ENSHGLG00100002176	BMS1	99	84.754	Heterocephalus_glaber_male
ENSBTAG00000012878	BMS1	89	67.695	ENSHCOG00000017604	bms1	99	66.732	Hippocampus_comes
ENSBTAG00000012878	BMS1	99	61.789	ENSIPUG00000017855	bms1	94	73.363	Ictalurus_punctatus
ENSBTAG00000012878	BMS1	99	88.378	ENSSTOG00000015063	BMS1	99	88.153	Ictidomys_tridecemlineatus
ENSBTAG00000012878	BMS1	99	86.729	ENSJJAG00000017328	Bms1	99	86.495	Jaculus_jaculus
ENSBTAG00000012878	BMS1	56	66.417	ENSKMAG00000021982	bms1	96	66.154	Kryptolebias_marmoratus
ENSBTAG00000012878	BMS1	81	72.248	ENSLBEG00000028208	bms1	99	60.385	Labrus_bergylta
ENSBTAG00000012878	BMS1	99	62.106	ENSLACG00000001600	BMS1	100	61.963	Latimeria_chalumnae
ENSBTAG00000012878	BMS1	83	75.395	ENSLOCG00000012914	bms1	99	63.235	Lepisosteus_oculatus
ENSBTAG00000012878	BMS1	99	88.629	ENSLAFG00000006250	BMS1	99	87.607	Loxodonta_africana
ENSBTAG00000012878	BMS1	81	91.228	ENSMFAG00000037771	BMS1	97	91.194	Macaca_fascicularis
ENSBTAG00000012878	BMS1	90	75.838	ENSMMUG00000007426	-	99	75.387	Macaca_mulatta
ENSBTAG00000012878	BMS1	85	70.707	ENSMLEG00000029084	-	97	70.523	Mandrillus_leucophaeus
ENSBTAG00000012878	BMS1	99	60.217	ENSMAMG00000020855	bms1	99	59.551	Mastacembelus_armatus
ENSBTAG00000012878	BMS1	87	69.293	ENSMZEG00005005663	bms1	99	60.725	Maylandia_zebra
ENSBTAG00000012878	BMS1	95	71.474	ENSMGAG00000001170	BMS1	99	71.772	Meleagris_gallopavo
ENSBTAG00000012878	BMS1	99	85.470	ENSMAUG00000002195	Bms1	99	84.877	Mesocricetus_auratus
ENSBTAG00000012878	BMS1	100	88.829	ENSMICG00000009977	BMS1	100	88.363	Microcebus_murinus
ENSBTAG00000012878	BMS1	99	84.321	ENSMOCG00000002038	Bms1	99	84.867	Microtus_ochrogaster
ENSBTAG00000012878	BMS1	86	68.672	ENSMMOG00000000977	bms1	97	66.163	Mola_mola
ENSBTAG00000012878	BMS1	99	78.610	ENSMODG00000001177	BMS1	99	79.048	Monodelphis_domestica
ENSBTAG00000012878	BMS1	89	67.203	ENSMALG00000009680	bms1	99	60.294	Monopterus_albus
ENSBTAG00000012878	BMS1	73	94.903	MGP_CAROLIEiJ_G0028785	-	85	94.903	Mus_caroli
ENSBTAG00000012878	BMS1	99	84.538	ENSMUSG00000030138	Bms1	99	84.926	Mus_musculus
ENSBTAG00000012878	BMS1	99	84.436	MGP_PahariEiJ_G0022539	Bms1	99	84.280	Mus_pahari
ENSBTAG00000012878	BMS1	99	84.305	MGP_SPRETEiJ_G0029816	Bms1	99	84.693	Mus_spretus
ENSBTAG00000012878	BMS1	99	91.518	ENSMPUG00000017276	BMS1	99	90.654	Mustela_putorius_furo
ENSBTAG00000012878	BMS1	100	90.070	ENSMLUG00000003260	BMS1	100	89.519	Myotis_lucifugus
ENSBTAG00000012878	BMS1	99	75.625	ENSNGAG00000015258	Bms1	99	82.264	Nannospalax_galili
ENSBTAG00000012878	BMS1	100	87.626	ENSNLEG00000015791	BMS1	100	87.549	Nomascus_leucogenys
ENSBTAG00000012878	BMS1	80	96.890	ENSOPRG00000005195	BMS1	81	96.890	Ochotona_princeps
ENSBTAG00000012878	BMS1	99	86.172	ENSODEG00000005554	BMS1	99	86.094	Octodon_degus
ENSBTAG00000012878	BMS1	88	69.243	ENSONIG00000007227	bms1	53	68.088	Oreochromis_niloticus
ENSBTAG00000012878	BMS1	100	76.649	ENSOANG00000000662	-	100	76.881	Ornithorhynchus_anatinus
ENSBTAG00000012878	BMS1	99	88.378	ENSOCUG00000005354	BMS1	99	87.588	Oryctolagus_cuniculus
ENSBTAG00000012878	BMS1	87	69.692	ENSORLG00000014655	bms1	98	67.954	Oryzias_latipes
ENSBTAG00000012878	BMS1	87	69.381	ENSORLG00020016246	bms1	92	68.567	Oryzias_latipes_hni
ENSBTAG00000012878	BMS1	87	69.919	ENSORLG00015014183	bms1	92	68.404	Oryzias_latipes_hsok
ENSBTAG00000012878	BMS1	87	70.130	ENSOMEG00000015042	bms1	55	67.020	Oryzias_melastigma
ENSBTAG00000012878	BMS1	99	89.992	ENSOGAG00000006511	BMS1	99	89.837	Otolemur_garnettii
ENSBTAG00000012878	BMS1	100	98.140	ENSOARG00000003900	BMS1	100	98.140	Ovis_aries
ENSBTAG00000012878	BMS1	100	85.447	ENSPPAG00000027837	BMS1	100	85.370	Pan_paniscus
ENSBTAG00000012878	BMS1	99	91.108	ENSPPRG00000001311	BMS1	99	90.874	Panthera_pardus
ENSBTAG00000012878	BMS1	99	89.486	ENSPTIG00000009652	BMS1	99	89.019	Panthera_tigris_altaica
ENSBTAG00000012878	BMS1	100	89.330	ENSPTRG00000002441	BMS1	100	89.252	Pan_troglodytes
ENSBTAG00000012878	BMS1	100	71.899	ENSPSIG00000006481	BMS1	99	71.742	Pelodiscus_sinensis
ENSBTAG00000012878	BMS1	99	78.488	ENSPEMG00000022467	Bms1	99	78.566	Peromyscus_maniculatus_bairdii
ENSBTAG00000012878	BMS1	95	93.960	ENSPCIG00000001339	BMS1	98	87.853	Phascolarctos_cinereus
ENSBTAG00000012878	BMS1	79	75.123	ENSPFOG00000015180	bms1	99	66.731	Poecilia_formosa
ENSBTAG00000012878	BMS1	79	75.369	ENSPMEG00000023176	bms1	94	66.925	Poecilia_mexicana
ENSBTAG00000012878	BMS1	85	68.542	ENSPREG00000002695	bms1	99	66.796	Poecilia_reticulata
ENSBTAG00000012878	BMS1	61	86.008	ENSPPYG00000002836	-	99	85.366	Pongo_abelii
ENSBTAG00000012878	BMS1	73	95.918	ENSPCAG00000014528	BMS1	73	95.918	Procavia_capensis
ENSBTAG00000012878	BMS1	95	84.721	ENSPCOG00000023834	-	100	83.858	Propithecus_coquereli
ENSBTAG00000012878	BMS1	100	88.180	ENSPVAG00000000725	BMS1	100	87.082	Pteropus_vampyrus
ENSBTAG00000012878	BMS1	86	69.318	ENSPNYG00000018866	bms1	86	67.810	Pundamilia_nyererei
ENSBTAG00000012878	BMS1	82	81.904	ENSRNOG00000006576	Bms1	100	81.991	Rattus_norvegicus
ENSBTAG00000012878	BMS1	100	87.704	ENSRROG00000040101	BMS1	100	87.704	Rhinopithecus_roxellana
ENSBTAG00000012878	BMS1	72	45.979	YPL217C	-	79	47.186	Saccharomyces_cerevisiae
ENSBTAG00000012878	BMS1	100	88.733	ENSSBOG00000035778	BMS1	100	88.889	Saimiri_boliviensis_boliviensis
ENSBTAG00000012878	BMS1	99	78.528	ENSSHAG00000005062	BMS1	99	78.067	Sarcophilus_harrisii
ENSBTAG00000012878	BMS1	99	63.089	ENSSFOG00015022313	bms1	99	62.348	Scleropages_formosus
ENSBTAG00000012878	BMS1	89	67.955	ENSSMAG00000019966	bms1	99	61.035	Scophthalmus_maximus
ENSBTAG00000012878	BMS1	70	80.134	ENSSARG00000014407	BMS1	100	79.106	Sorex_araneus
ENSBTAG00000012878	BMS1	99	72.159	ENSSPUG00000014454	BMS1	99	72.134	Sphenodon_punctatus
ENSBTAG00000012878	BMS1	99	93.692	ENSSSCG00000010198	BMS1	99	94.081	Sus_scrofa
ENSBTAG00000012878	BMS1	99	71.834	ENSTGUG00000006302	-	99	72.222	Taeniopygia_guttata
ENSBTAG00000012878	BMS1	86	65.378	ENSTRUG00000008028	bms1	97	64.062	Takifugu_rubripes
ENSBTAG00000012878	BMS1	99	59.954	ENSTNIG00000006216	bms1	88	66.505	Tetraodon_nigroviridis
ENSBTAG00000012878	BMS1	60	93.537	ENSTBEG00000001673	-	63	93.493	Tupaia_belangeri
ENSBTAG00000012878	BMS1	100	92.290	ENSTTRG00000007983	BMS1	100	92.290	Tursiops_truncatus
ENSBTAG00000012878	BMS1	99	91.582	ENSUAMG00000023996	BMS1	99	91.193	Ursus_americanus
ENSBTAG00000012878	BMS1	99	91.504	ENSUMAG00000016523	BMS1	99	91.115	Ursus_maritimus
ENSBTAG00000012878	BMS1	88	87.863	ENSVPAG00000007477	BMS1	94	95.940	Vicugna_pacos
ENSBTAG00000012878	BMS1	99	90.973	ENSVVUG00000021305	BMS1	99	90.498	Vulpes_vulpes
ENSBTAG00000012878	BMS1	98	66.248	ENSXETG00000008158	bms1	99	66.306	Xenopus_tropicalis
ENSBTAG00000012878	BMS1	85	68.672	ENSXCOG00000000506	bms1	95	76.601	Xiphophorus_couchianus
ENSBTAG00000012878	BMS1	85	68.660	ENSXMAG00000014236	bms1	99	67.248	Xiphophorus_maculatus