EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000013045 (Gene tree)
Gene ID: 525619
Gene Symbol: DKC1
Alias: -
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 12237 bases
Position: chrX:36210775-36223011
Accession: 28078
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000017339	TruB_N	PF01509.18	2.1e-21	1	1
ENSBTAP00000017339	PUA	PF01472.20	5.1e-18	1	1
ENSBTAP00000017339	DKCLD	PF08068.12	1.6e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000017339	-	2729	-	ENSBTAP00000017339	506 (aa)	-	A7YWH5

Gene Model

Click here to download ENSBTAG00000013045's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000013045's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000013045	DKC1	100	91.440	ENSG00000130826	DKC1	99	99.512	Homo_sapiens
ENSBTAG00000013045	DKC1	86	80.909	ENSAPOG00000007799	dkc1	84	80.952	Acanthochromis_polyacanthus
ENSBTAG00000013045	DKC1	90	95.624	ENSAMEG00000002776	DKC1	97	91.853	Ailuropoda_melanoleuca
ENSBTAG00000013045	DKC1	88	78.444	ENSACIG00000022614	dkc1	90	81.106	Amphilophus_citrinellus
ENSBTAG00000013045	DKC1	86	80.455	ENSAOCG00000013159	dkc1	87	79.727	Amphiprion_ocellaris
ENSBTAG00000013045	DKC1	86	80.734	ENSAPEG00000002284	dkc1	86	80.778	Amphiprion_percula
ENSBTAG00000013045	DKC1	80	83.455	ENSATEG00000013682	dkc1	81	83.051	Anabas_testudineus
ENSBTAG00000013045	DKC1	87	84.000	ENSACAG00000015600	DKC1	77	84.222	Anolis_carolinensis
ENSBTAG00000013045	DKC1	97	91.853	ENSANAG00000022732	DKC1	100	90.467	Aotus_nancymaae
ENSBTAG00000013045	DKC1	87	79.909	ENSACLG00000015605	dkc1	94	77.489	Astatotilapia_calliptera
ENSBTAG00000013045	DKC1	88	80.537	ENSAMXG00000017108	dkc1	87	79.221	Astyanax_mexicanus
ENSBTAG00000013045	DKC1	82	66.586	WBGene00010478	K01G5.5	97	63.242	Caenorhabditis_elegans
ENSBTAG00000013045	DKC1	100	90.485	ENSCJAG00000004210	DKC1	100	90.485	Callithrix_jacchus
ENSBTAG00000013045	DKC1	90	81.996	ENSCAFG00000009311	-	91	82.213	Canis_familiaris
ENSBTAG00000013045	DKC1	100	90.522	ENSCAFG00000019620	-	100	90.329	Canis_familiaris
ENSBTAG00000013045	DKC1	100	90.522	ENSCAFG00020008918	-	100	90.329	Canis_lupus_dingo
ENSBTAG00000013045	DKC1	90	82.057	ENSCAFG00020009379	-	87	82.276	Canis_lupus_dingo
ENSBTAG00000013045	DKC1	100	98.617	ENSCHIG00000017392	DKC1	100	98.617	Capra_hircus
ENSBTAG00000013045	DKC1	96	89.484	ENSTSYG00000007681	DKC1	96	89.881	Carlito_syrichta
ENSBTAG00000013045	DKC1	81	93.154	ENSCAPG00000003342	DKC1	92	93.596	Cavia_aperea
ENSBTAG00000013045	DKC1	97	89.738	ENSCPOG00000008825	DKC1	97	90.141	Cavia_porcellus
ENSBTAG00000013045	DKC1	100	82.101	ENSCCAG00000027418	DKC1	96	82.863	Cebus_capucinus
ENSBTAG00000013045	DKC1	100	90.661	ENSCATG00000033602	DKC1	100	90.661	Cercocebus_atys
ENSBTAG00000013045	DKC1	96	90.389	ENSCLAG00000000720	DKC1	96	91.020	Chinchilla_lanigera
ENSBTAG00000013045	DKC1	100	90.856	ENSCSAG00000006706	DKC1	100	90.856	Chlorocebus_sabaeus
ENSBTAG00000013045	DKC1	93	82.316	ENSCPBG00000005858	DKC1	94	86.395	Chrysemys_picta_bellii
ENSBTAG00000013045	DKC1	86	73.394	ENSCING00000004599	-	83	74.545	Ciona_intestinalis
ENSBTAG00000013045	DKC1	86	73.516	ENSCSAVG00000010047	-	97	73.963	Ciona_savignyi
ENSBTAG00000013045	DKC1	100	90.856	ENSCANG00000027987	DKC1	100	90.856	Colobus_angolensis_palliatus
ENSBTAG00000013045	DKC1	97	88.330	ENSCGRG00001014574	-	99	87.647	Cricetulus_griseus_chok1gshd
ENSBTAG00000013045	DKC1	78	73.604	ENSCGRG00001016789	-	79	75.676	Cricetulus_griseus_chok1gshd
ENSBTAG00000013045	DKC1	99	63.147	ENSCGRG00000014809	-	77	75.676	Cricetulus_griseus_crigri
ENSBTAG00000013045	DKC1	97	88.330	ENSCGRG00000016075	-	99	87.647	Cricetulus_griseus_crigri
ENSBTAG00000013045	DKC1	92	78.205	ENSCSEG00000012633	dkc1	94	80.180	Cynoglossus_semilaevis
ENSBTAG00000013045	DKC1	87	79.545	ENSCVAG00000010155	dkc1	84	79.773	Cyprinodon_variegatus
ENSBTAG00000013045	DKC1	80	85.149	ENSDARG00000016484	dkc1	85	80.769	Danio_rerio
ENSBTAG00000013045	DKC1	97	90.323	ENSDNOG00000004218	DKC1	91	93.118	Dasypus_novemcinctus
ENSBTAG00000013045	DKC1	59	83.000	ENSDORG00000013566	-	100	83.000	Dipodomys_ordii
ENSBTAG00000013045	DKC1	87	69.021	FBgn0259937	Nop60B	89	66.995	Drosophila_melanogaster
ENSBTAG00000013045	DKC1	92	86.724	ENSETEG00000016095	DKC1	95	86.724	Echinops_telfairi
ENSBTAG00000013045	DKC1	67	77.811	ENSEBUG00000015962	dkc1	99	82.253	Eptatretus_burgeri
ENSBTAG00000013045	DKC1	100	90.962	ENSEASG00005007484	DKC1	100	90.769	Equus_asinus_asinus
ENSBTAG00000013045	DKC1	100	90.962	ENSECAG00000023524	DKC1	100	90.769	Equus_caballus
ENSBTAG00000013045	DKC1	84	90.376	ENSEEUG00000003323	DKC1	100	90.376	Erinaceus_europaeus
ENSBTAG00000013045	DKC1	86	80.726	ENSELUG00000014538	dkc1	90	79.642	Esox_lucius
ENSBTAG00000013045	DKC1	100	90.927	ENSFCAG00000006577	DKC1	100	90.927	Felis_catus
ENSBTAG00000013045	DKC1	86	83.673	ENSFALG00000011496	DKC1	85	82.774	Ficedula_albicollis
ENSBTAG00000013045	DKC1	96	89.431	ENSFDAG00000002516	DKC1	97	89.431	Fukomys_damarensis
ENSBTAG00000013045	DKC1	87	80.499	ENSFHEG00000004627	dkc1	89	78.448	Fundulus_heteroclitus
ENSBTAG00000013045	DKC1	77	83.120	ENSGMOG00000017277	dkc1	100	83.120	Gadus_morhua
ENSBTAG00000013045	DKC1	86	86.667	ENSGALG00000005054	DKC1	86	85.235	Gallus_gallus
ENSBTAG00000013045	DKC1	88	79.910	ENSGAFG00000011486	dkc1	73	80.778	Gambusia_affinis
ENSBTAG00000013045	DKC1	79	86.432	ENSGACG00000004373	dkc1	96	89.058	Gasterosteus_aculeatus
ENSBTAG00000013045	DKC1	93	82.737	ENSGAGG00000011330	DKC1	89	84.946	Gopherus_agassizii
ENSBTAG00000013045	DKC1	100	91.440	ENSGGOG00000001045	DKC1	100	91.440	Gorilla_gorilla
ENSBTAG00000013045	DKC1	87	80.317	ENSHBUG00000012436	dkc1	93	77.253	Haplochromis_burtoni
ENSBTAG00000013045	DKC1	97	88.800	ENSHGLG00000000649	DKC1	97	88.600	Heterocephalus_glaber_female
ENSBTAG00000013045	DKC1	96	88.664	ENSHGLG00100001153	DKC1	97	88.462	Heterocephalus_glaber_male
ENSBTAG00000013045	DKC1	78	86.076	ENSHCOG00000021099	dkc1	91	77.124	Hippocampus_comes
ENSBTAG00000013045	DKC1	91	78.834	ENSIPUG00000010309	dkc1	88	78.664	Ictalurus_punctatus
ENSBTAG00000013045	DKC1	97	80.561	ENSSTOG00000011904	-	93	80.561	Ictidomys_tridecemlineatus
ENSBTAG00000013045	DKC1	97	82.495	ENSSTOG00000020149	-	97	82.164	Ictidomys_tridecemlineatus
ENSBTAG00000013045	DKC1	92	93.362	ENSSTOG00000001074	-	96	93.362	Ictidomys_tridecemlineatus
ENSBTAG00000013045	DKC1	59	83.667	ENSJJAG00000010086	-	100	83.667	Jaculus_jaculus
ENSBTAG00000013045	DKC1	87	78.458	ENSKMAG00000008010	dkc1	86	78.636	Kryptolebias_marmoratus
ENSBTAG00000013045	DKC1	86	80.137	ENSLBEG00000019122	dkc1	92	78.233	Labrus_bergylta
ENSBTAG00000013045	DKC1	88	81.292	ENSLACG00000014025	DKC1	91	88.442	Latimeria_chalumnae
ENSBTAG00000013045	DKC1	87	81.839	ENSLOCG00000013713	dkc1	88	83.218	Lepisosteus_oculatus
ENSBTAG00000013045	DKC1	97	87.928	ENSLAFG00000000221	DKC1	90	90.968	Loxodonta_africana
ENSBTAG00000013045	DKC1	100	90.661	ENSMFAG00000032398	DKC1	86	90.661	Macaca_fascicularis
ENSBTAG00000013045	DKC1	100	90.856	ENSMMUG00000005768	DKC1	100	90.856	Macaca_mulatta
ENSBTAG00000013045	DKC1	100	90.856	ENSMNEG00000034503	DKC1	100	90.856	Macaca_nemestrina
ENSBTAG00000013045	DKC1	100	90.856	ENSMLEG00000034422	DKC1	100	90.856	Mandrillus_leucophaeus
ENSBTAG00000013045	DKC1	81	84.597	ENSMAMG00000005427	dkc1	90	85.821	Mastacembelus_armatus
ENSBTAG00000013045	DKC1	87	80.543	ENSMZEG00005014503	dkc1	93	77.468	Maylandia_zebra
ENSBTAG00000013045	DKC1	86	77.951	ENSMGAG00000009238	DKC1	99	80.303	Meleagris_gallopavo
ENSBTAG00000013045	DKC1	59	83.333	ENSMAUG00000016454	-	100	83.333	Mesocricetus_auratus
ENSBTAG00000013045	DKC1	86	81.406	ENSMICG00000002818	-	99	83.791	Microcebus_murinus
ENSBTAG00000013045	DKC1	97	90.612	ENSMICG00000038751	-	96	90.612	Microcebus_murinus
ENSBTAG00000013045	DKC1	59	81.000	ENSMOCG00000001169	-	100	81.000	Microtus_ochrogaster
ENSBTAG00000013045	DKC1	79	86.181	ENSMMOG00000020348	dkc1	87	86.181	Mola_mola
ENSBTAG00000013045	DKC1	90	86.123	ENSMODG00000009243	DKC1	78	86.123	Monodelphis_domestica
ENSBTAG00000013045	DKC1	87	80.137	ENSMALG00000009454	dkc1	91	77.609	Monopterus_albus
ENSBTAG00000013045	DKC1	97	76.892	MGP_CAROLIEiJ_G0033191	Dkc1	100	91.892	Mus_caroli
ENSBTAG00000013045	DKC1	97	88.438	ENSMUSG00000031403	Dkc1	100	83.333	Mus_musculus
ENSBTAG00000013045	DKC1	97	87.903	MGP_PahariEiJ_G0031735	Dkc1	99	87.426	Mus_pahari
ENSBTAG00000013045	DKC1	97	87.854	MGP_SPRETEiJ_G0034351	Dkc1	100	83.333	Mus_spretus
ENSBTAG00000013045	DKC1	97	90.818	ENSMPUG00000016136	DKC1	93	91.071	Mustela_putorius_furo
ENSBTAG00000013045	DKC1	91	87.419	ENSMLUG00000011918	DKC1	88	87.419	Myotis_lucifugus
ENSBTAG00000013045	DKC1	59	83.667	ENSNGAG00000015724	-	100	83.667	Nannospalax_galili
ENSBTAG00000013045	DKC1	78	86.616	ENSNBRG00000005638	dkc1	80	86.181	Neolamprologus_brichardi
ENSBTAG00000013045	DKC1	100	91.051	ENSNLEG00000014323	DKC1	96	92.137	Nomascus_leucogenys
ENSBTAG00000013045	DKC1	85	84.149	ENSMEUG00000001066	DKC1	92	84.471	Notamacropus_eugenii
ENSBTAG00000013045	DKC1	96	74.590	ENSOPRG00000005248	DKC1	73	89.344	Ochotona_princeps
ENSBTAG00000013045	DKC1	59	84.667	ENSODEG00000000549	-	100	84.667	Octodon_degus
ENSBTAG00000013045	DKC1	88	93.049	ENSODEG00000011816	-	90	92.842	Octodon_degus
ENSBTAG00000013045	DKC1	87	81.674	ENSONIG00000013889	dkc1	91	79.258	Oreochromis_niloticus
ENSBTAG00000013045	DKC1	84	89.744	ENSOANG00000008713	-	88	90.023	Ornithorhynchus_anatinus
ENSBTAG00000013045	DKC1	57	65.116	ENSOANG00000022295	-	84	65.116	Ornithorhynchus_anatinus
ENSBTAG00000013045	DKC1	97	90.891	ENSOCUG00000012646	DKC1	99	91.321	Oryctolagus_cuniculus
ENSBTAG00000013045	DKC1	86	80.139	ENSORLG00000018748	dkc1	89	76.821	Oryzias_latipes
ENSBTAG00000013045	DKC1	81	83.824	ENSOMEG00000005786	dkc1	82	84.937	Oryzias_melastigma
ENSBTAG00000013045	DKC1	97	90.119	ENSOGAG00000003399	DKC1	99	89.575	Otolemur_garnettii
ENSBTAG00000013045	DKC1	100	97.431	ENSOARG00000003047	DKC1	100	97.431	Ovis_aries
ENSBTAG00000013045	DKC1	100	91.440	ENSPPAG00000023820	DKC1	100	91.440	Pan_paniscus
ENSBTAG00000013045	DKC1	91	94.760	ENSPPRG00000009104	DKC1	97	91.039	Panthera_pardus
ENSBTAG00000013045	DKC1	90	92.936	ENSPTIG00000017469	DKC1	96	89.117	Panthera_tigris_altaica
ENSBTAG00000013045	DKC1	97	92.555	ENSPTRG00000043416	-	84	92.354	Pan_troglodytes
ENSBTAG00000013045	DKC1	100	91.440	ENSPTRG00000022449	DKC1	100	91.440	Pan_troglodytes
ENSBTAG00000013045	DKC1	100	90.856	ENSPANG00000011978	DKC1	100	90.856	Papio_anubis
ENSBTAG00000013045	DKC1	85	83.450	ENSPKIG00000008443	dkc1	90	80.822	Paramormyrops_kingsleyae
ENSBTAG00000013045	DKC1	73	90.860	ENSPSIG00000013765	DKC1	86	93.838	Pelodiscus_sinensis
ENSBTAG00000013045	DKC1	87	75.336	ENSPMGG00000004097	dkc1	82	75.336	Periophthalmus_magnuspinnatus
ENSBTAG00000013045	DKC1	97	55.444	ENSPEMG00000013348	Dkc1	95	95.385	Peromyscus_maniculatus_bairdii
ENSBTAG00000013045	DKC1	89	87.528	ENSPCIG00000016706	DKC1	76	87.253	Phascolarctos_cinereus
ENSBTAG00000013045	DKC1	88	80.180	ENSPFOG00000018653	dkc1	85	81.050	Poecilia_formosa
ENSBTAG00000013045	DKC1	88	80.180	ENSPLAG00000003272	dkc1	77	81.050	Poecilia_latipinna
ENSBTAG00000013045	DKC1	88	80.180	ENSPMEG00000010413	dkc1	85	81.050	Poecilia_mexicana
ENSBTAG00000013045	DKC1	88	80.405	ENSPREG00000004100	dkc1	84	81.279	Poecilia_reticulata
ENSBTAG00000013045	DKC1	99	91.356	ENSPPYG00000020892	DKC1	100	91.356	Pongo_abelii
ENSBTAG00000013045	DKC1	74	94.385	ENSPCAG00000015034	DKC1	73	94.385	Procavia_capensis
ENSBTAG00000013045	DKC1	97	92.137	ENSPCOG00000026874	DKC1	96	92.137	Propithecus_coquereli
ENSBTAG00000013045	DKC1	97	89.879	ENSPVAG00000009222	DKC1	97	90.081	Pteropus_vampyrus
ENSBTAG00000013045	DKC1	87	80.317	ENSPNYG00000020063	dkc1	88	80.317	Pundamilia_nyererei
ENSBTAG00000013045	DKC1	91	79.957	ENSPNAG00000005780	dkc1	92	77.322	Pygocentrus_nattereri
ENSBTAG00000013045	DKC1	96	81.744	ENSRNOG00000055562	Dkc1	91	84.665	Rattus_norvegicus
ENSBTAG00000013045	DKC1	100	90.856	ENSRBIG00000028457	DKC1	86	90.856	Rhinopithecus_bieti
ENSBTAG00000013045	DKC1	100	90.856	ENSRROG00000044780	DKC1	100	90.856	Rhinopithecus_roxellana
ENSBTAG00000013045	DKC1	77	70.951	YLR175W	-	94	64.097	Saccharomyces_cerevisiae
ENSBTAG00000013045	DKC1	97	91.952	ENSSBOG00000033746	DKC1	100	91.262	Saimiri_boliviensis_boliviensis
ENSBTAG00000013045	DKC1	91	86.147	ENSSHAG00000002463	DKC1	97	86.334	Sarcophilus_harrisii
ENSBTAG00000013045	DKC1	91	80.652	ENSSFOG00015009585	dkc1	88	80.652	Scleropages_formosus
ENSBTAG00000013045	DKC1	87	81.321	ENSSMAG00000002552	dkc1	88	81.465	Scophthalmus_maximus
ENSBTAG00000013045	DKC1	92	78.556	ENSSDUG00000009963	dkc1	85	81.633	Seriola_dumerili
ENSBTAG00000013045	DKC1	92	77.070	ENSSLDG00000019342	dkc1	90	81.755	Seriola_lalandi_dorsalis
ENSBTAG00000013045	DKC1	98	83.633	ENSSARG00000001822	DKC1	99	83.034	Sorex_araneus
ENSBTAG00000013045	DKC1	85	86.927	ENSSPUG00000018907	DKC1	86	85.242	Sphenodon_punctatus
ENSBTAG00000013045	DKC1	87	79.499	ENSSPAG00000002585	dkc1	81	79.499	Stegastes_partitus
ENSBTAG00000013045	DKC1	97	89.703	ENSSSCG00000012823	DKC1	97	90.891	Sus_scrofa
ENSBTAG00000013045	DKC1	79	85.427	ENSTGUG00000006781	DKC1	88	85.176	Taeniopygia_guttata
ENSBTAG00000013045	DKC1	86	80.275	ENSTRUG00000004413	dkc1	85	80.734	Takifugu_rubripes
ENSBTAG00000013045	DKC1	85	66.514	ENSTNIG00000002582	dkc1	84	66.514	Tetraodon_nigroviridis
ENSBTAG00000013045	DKC1	67	88.728	ENSTBEG00000011262	DKC1	95	89.595	Tupaia_belangeri
ENSBTAG00000013045	DKC1	74	92.131	ENSTTRG00000008089	DKC1	74	92.131	Tursiops_truncatus
ENSBTAG00000013045	DKC1	95	91.039	ENSUAMG00000022721	DKC1	93	96.372	Ursus_americanus
ENSBTAG00000013045	DKC1	95	88.981	ENSUMAG00000016899	DKC1	99	93.857	Ursus_maritimus
ENSBTAG00000013045	DKC1	99	89.403	ENSVVUG00000020734	-	89	89.210	Vulpes_vulpes
ENSBTAG00000013045	DKC1	97	73.984	ENSVVUG00000021671	-	80	79.861	Vulpes_vulpes
ENSBTAG00000013045	DKC1	91	80.303	ENSXETG00000032517	DKC1	85	82.167	Xenopus_tropicalis
ENSBTAG00000013045	DKC1	88	79.505	ENSXCOG00000005498	dkc1	91	80.365	Xiphophorus_couchianus
ENSBTAG00000013045	DKC1	88	79.955	ENSXMAG00000004919	dkc1	85	80.822	Xiphophorus_maculatus