EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000013173 (Gene tree)
Gene ID: 618235
Gene Symbol: SEPT3
Alias: -
Full Name: Bos taurus septin 3 (SEPT3)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 19611 bases
Position: chr5:112960110-112979720
Accession: NM_001076949
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000069681	MMR_HSR1	PF01926.23	5.4e-08	1	1
ENSBTAP00000017531	MMR_HSR1	PF01926.23	5.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000017531	-	2400	XM_005207430	ENSBTAP00000017531	357 (aa)	XP_005207487	Q08DM7
ENSBTAT00000073476	-	1068	-	ENSBTAP00000069681	355 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000013173's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta05100	Bacterial invasion of epithelial cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000013173's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000013173	SEPT3	86	48.693	ENSBTAG00000008320	SEPT5	90	45.858
ENSBTAG00000013173	SEPT3	90	58.485	ENSBTAG00000016330	SEPT12	93	57.270
ENSBTAG00000013173	SEPT3	84	44.333	ENSBTAG00000021372	SEPT11	70	44.333
ENSBTAG00000013173	SEPT3	85	45.545	ENSBTAG00000009327	SEPT14	68	45.545
ENSBTAG00000013173	SEPT3	88	43.354	ENSBTAG00000008609	SEPT8	69	43.354
ENSBTAG00000013173	SEPT3	89	49.057	ENSBTAG00000015368	SEPT4	80	51.736
ENSBTAG00000013173	SEPT3	93	66.970	ENSBTAG00000002633	SEPT9	56	69.435
ENSBTAG00000013173	SEPT3	82	50.000	ENSBTAG00000001182	SEPT7	69	50.000
ENSBTAG00000013173	SEPT3	81	47.260	ENSBTAG00000021219	SEPT1	79	47.260
ENSBTAG00000013173	SEPT3	84	48.837	ENSBTAG00000002608	SEPT2	83	48.837

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000013173	SEPT3	100	98.883	ENSG00000100167	SEPT3	100	98.980	Homo_sapiens
ENSBTAG00000013173	SEPT3	84	88.629	ENSAPOG00000003795	sept3	74	88.814	Acanthochromis_polyacanthus
ENSBTAG00000013173	SEPT3	99	98.028	ENSAMEG00000009380	SEPT3	99	98.028	Ailuropoda_melanoleuca
ENSBTAG00000013173	SEPT3	84	86.957	ENSACIG00000001821	sept3	74	86.957	Amphilophus_citrinellus
ENSBTAG00000013173	SEPT3	84	87.960	ENSAOCG00000003633	sept3	74	86.842	Amphiprion_ocellaris
ENSBTAG00000013173	SEPT3	84	88.294	ENSAPEG00000022582	sept3	96	86.296	Amphiprion_percula
ENSBTAG00000013173	SEPT3	94	79.290	ENSATEG00000000191	sept3	94	79.290	Anabas_testudineus
ENSBTAG00000013173	SEPT3	92	97.554	ENSAPLG00000002801	SEPT3	99	96.396	Anas_platyrhynchos
ENSBTAG00000013173	SEPT3	94	95.252	ENSACAG00000003974	SEPT3	96	95.252	Anolis_carolinensis
ENSBTAG00000013173	SEPT3	100	98.324	ENSANAG00000019445	SEPT3	100	98.980	Aotus_nancymaae
ENSBTAG00000013173	SEPT3	84	87.625	ENSACLG00000009596	-	80	83.612	Astatotilapia_calliptera
ENSBTAG00000013173	SEPT3	91	86.239	ENSAMXG00000018729	sept3	96	86.239	Astyanax_mexicanus
ENSBTAG00000013173	SEPT3	100	98.324	ENSCJAG00000043636	SEPT3	100	98.639	Callithrix_jacchus
ENSBTAG00000013173	SEPT3	99	98.599	ENSCAFG00000000995	SEPT3	98	98.599	Canis_familiaris
ENSBTAG00000013173	SEPT3	100	99.162	ENSCHIG00000016257	SEPT3	100	99.162	Capra_hircus
ENSBTAG00000013173	SEPT3	100	98.324	ENSTSYG00000012514	SEPT3	100	98.639	Carlito_syrichta
ENSBTAG00000013173	SEPT3	99	98.588	ENSCAPG00000017776	-	98	98.588	Cavia_aperea
ENSBTAG00000013173	SEPT3	100	87.151	ENSCAPG00000007508	-	100	87.151	Cavia_aperea
ENSBTAG00000013173	SEPT3	99	84.746	ENSCPOG00000004011	-	99	84.746	Cavia_porcellus
ENSBTAG00000013173	SEPT3	100	98.603	ENSCPOG00000013212	-	100	98.603	Cavia_porcellus
ENSBTAG00000013173	SEPT3	100	98.603	ENSCCAG00000022439	SEPT3	100	98.980	Cebus_capucinus
ENSBTAG00000013173	SEPT3	100	98.883	ENSCATG00000045173	SEPT3	100	98.980	Cercocebus_atys
ENSBTAG00000013173	SEPT3	100	97.765	ENSCLAG00000017190	SEPT3	100	97.765	Chinchilla_lanigera
ENSBTAG00000013173	SEPT3	100	98.883	ENSCSAG00000005722	SEPT3	100	98.883	Chlorocebus_sabaeus
ENSBTAG00000013173	SEPT3	94	94.955	ENSCPBG00000020516	SEPT3	96	94.955	Chrysemys_picta_bellii
ENSBTAG00000013173	SEPT3	99	98.870	ENSCANG00000030048	SEPT3	100	98.870	Colobus_angolensis_palliatus
ENSBTAG00000013173	SEPT3	100	98.324	ENSCGRG00001018092	Sept3	100	98.324	Cricetulus_griseus_chok1gshd
ENSBTAG00000013173	SEPT3	91	98.765	ENSCGRG00000016977	Sept3	96	98.765	Cricetulus_griseus_crigri
ENSBTAG00000013173	SEPT3	84	87.919	ENSCVAG00000023430	sept3	73	87.919	Cyprinodon_variegatus
ENSBTAG00000013173	SEPT3	91	80.747	ENSDARG00000030656	sept3	96	80.747	Danio_rerio
ENSBTAG00000013173	SEPT3	94	97.329	ENSDNOG00000032372	SEPT3	88	97.329	Dasypus_novemcinctus
ENSBTAG00000013173	SEPT3	99	86.630	ENSDORG00000014056	Sept3	100	86.630	Dipodomys_ordii
ENSBTAG00000013173	SEPT3	72	99.130	ENSETEG00000004487	SEPT3	79	99.130	Echinops_telfairi
ENSBTAG00000013173	SEPT3	99	98.876	ENSEASG00005001015	-	100	98.857	Equus_asinus_asinus
ENSBTAG00000013173	SEPT3	99	98.876	ENSECAG00000023601	SEPT3	96	98.813	Equus_caballus
ENSBTAG00000013173	SEPT3	91	98.148	ENSEEUG00000011889	SEPT3	100	98.148	Erinaceus_europaeus
ENSBTAG00000013173	SEPT3	86	87.541	ENSELUG00000003004	sept3	97	77.410	Esox_lucius
ENSBTAG00000013173	SEPT3	100	98.603	ENSFCAG00000000889	SEPT3	100	98.980	Felis_catus
ENSBTAG00000013173	SEPT3	94	95.252	ENSFALG00000011773	SEPT3	96	95.252	Ficedula_albicollis
ENSBTAG00000013173	SEPT3	99	97.479	ENSFDAG00000010054	SEPT3	96	98.148	Fukomys_damarensis
ENSBTAG00000013173	SEPT3	84	87.291	ENSFHEG00000005258	sept3	75	84.887	Fundulus_heteroclitus
ENSBTAG00000013173	SEPT3	88	80.615	ENSGMOG00000005438	sept3	97	77.937	Gadus_morhua
ENSBTAG00000013173	SEPT3	94	94.659	ENSGALG00000011913	SEPT3	96	94.659	Gallus_gallus
ENSBTAG00000013173	SEPT3	84	88.294	ENSGAFG00000008333	sept3	73	87.171	Gambusia_affinis
ENSBTAG00000013173	SEPT3	90	82.075	ENSGACG00000015988	sept3	97	82.075	Gasterosteus_aculeatus
ENSBTAG00000013173	SEPT3	77	96.350	ENSGAGG00000005342	-	94	96.350	Gopherus_agassizii
ENSBTAG00000013173	SEPT3	100	98.883	ENSGGOG00000008961	SEPT3	100	98.980	Gorilla_gorilla
ENSBTAG00000013173	SEPT3	84	87.291	ENSHBUG00000005002	sept3	72	87.291	Haplochromis_burtoni
ENSBTAG00000013173	SEPT3	92	74.775	ENSHGLG00000020767	-	90	74.775	Heterocephalus_glaber_female
ENSBTAG00000013173	SEPT3	98	98.276	ENSHGLG00000006998	-	99	98.276	Heterocephalus_glaber_female
ENSBTAG00000013173	SEPT3	98	98.276	ENSHGLG00100007916	-	99	98.276	Heterocephalus_glaber_male
ENSBTAG00000013173	SEPT3	92	74.474	ENSHGLG00100019917	-	90	74.474	Heterocephalus_glaber_male
ENSBTAG00000013173	SEPT3	76	74.815	ENSHCOG00000016310	sept3	74	74.815	Hippocampus_comes
ENSBTAG00000013173	SEPT3	91	84.146	ENSIPUG00000021317	sept3	96	85.366	Ictalurus_punctatus
ENSBTAG00000013173	SEPT3	99	98.592	ENSSTOG00000012963	SEPT3	100	98.592	Ictidomys_tridecemlineatus
ENSBTAG00000013173	SEPT3	99	96.610	ENSJJAG00000019615	Sept3	99	96.610	Jaculus_jaculus
ENSBTAG00000013173	SEPT3	84	87.291	ENSKMAG00000021717	sept3	74	86.184	Kryptolebias_marmoratus
ENSBTAG00000013173	SEPT3	84	86.622	ENSLBEG00000019948	sept3	71	86.622	Labrus_bergylta
ENSBTAG00000013173	SEPT3	99	97.479	ENSLAFG00000015724	SEPT3	99	97.479	Loxodonta_africana
ENSBTAG00000013173	SEPT3	100	98.883	ENSMFAG00000039306	SEPT3	100	98.980	Macaca_fascicularis
ENSBTAG00000013173	SEPT3	100	98.883	ENSMMUG00000015139	SEPT3	100	98.980	Macaca_mulatta
ENSBTAG00000013173	SEPT3	100	98.883	ENSMNEG00000038786	SEPT3	100	98.980	Macaca_nemestrina
ENSBTAG00000013173	SEPT3	83	87.500	ENSMAMG00000004114	sept3	72	87.500	Mastacembelus_armatus
ENSBTAG00000013173	SEPT3	84	87.625	ENSMZEG00005023846	sept3	72	87.625	Maylandia_zebra
ENSBTAG00000013173	SEPT3	91	96.914	ENSMGAG00000012105	SEPT3	86	96.914	Meleagris_gallopavo
ENSBTAG00000013173	SEPT3	91	98.765	ENSMAUG00000014933	Sept3	96	98.765	Mesocricetus_auratus
ENSBTAG00000013173	SEPT3	100	98.324	ENSMICG00000003589	SEPT3	100	98.639	Microcebus_murinus
ENSBTAG00000013173	SEPT3	99	98.028	ENSMOCG00000015408	Sept3	100	98.028	Microtus_ochrogaster
ENSBTAG00000013173	SEPT3	91	84.308	ENSMMOG00000008339	sept3	97	84.308	Mola_mola
ENSBTAG00000013173	SEPT3	75	85.448	ENSMALG00000000364	sept3	94	85.448	Monopterus_albus
ENSBTAG00000013173	SEPT3	91	98.765	MGP_CAROLIEiJ_G0020078	Sept3	96	98.765	Mus_caroli
ENSBTAG00000013173	SEPT3	91	98.765	ENSMUSG00000022456	Sept3	96	98.765	Mus_musculus
ENSBTAG00000013173	SEPT3	91	98.765	MGP_PahariEiJ_G0020080	Sept3	96	98.765	Mus_pahari
ENSBTAG00000013173	SEPT3	91	98.765	MGP_SPRETEiJ_G0020978	Sept3	96	98.765	Mus_spretus
ENSBTAG00000013173	SEPT3	99	90.529	ENSMPUG00000016339	SEPT3	87	90.529	Mustela_putorius_furo
ENSBTAG00000013173	SEPT3	99	98.305	ENSMLUG00000002571	SEPT3	99	98.305	Myotis_lucifugus
ENSBTAG00000013173	SEPT3	99	98.305	ENSNGAG00000020671	Sept3	98	98.305	Nannospalax_galili
ENSBTAG00000013173	SEPT3	84	87.625	ENSNBRG00000018345	sept3	92	87.625	Neolamprologus_brichardi
ENSBTAG00000013173	SEPT3	100	98.045	ENSNLEG00000015691	SEPT3	100	98.639	Nomascus_leucogenys
ENSBTAG00000013173	SEPT3	100	97.486	ENSOPRG00000008638	SEPT3	100	97.486	Ochotona_princeps
ENSBTAG00000013173	SEPT3	98	98.286	ENSODEG00000012406	SEPT3	100	98.286	Octodon_degus
ENSBTAG00000013173	SEPT3	84	87.625	ENSONIG00000018012	sept3	97	82.789	Oreochromis_niloticus
ENSBTAG00000013173	SEPT3	77	95.290	ENSOANG00000004244	SEPT3	98	95.290	Ornithorhynchus_anatinus
ENSBTAG00000013173	SEPT3	99	98.310	ENSOCUG00000008260	SEPT3	62	98.310	Oryctolagus_cuniculus
ENSBTAG00000013173	SEPT3	84	87.291	ENSORLG00000004172	sept3	88	76.786	Oryzias_latipes
ENSBTAG00000013173	SEPT3	84	86.622	ENSORLG00020009259	sept3	78	85.526	Oryzias_latipes_hni
ENSBTAG00000013173	SEPT3	84	87.291	ENSORLG00015007295	sept3	97	80.422	Oryzias_latipes_hsok
ENSBTAG00000013173	SEPT3	84	87.625	ENSOMEG00000000404	sept3	94	86.194	Oryzias_melastigma
ENSBTAG00000013173	SEPT3	100	98.603	ENSOGAG00000014752	SEPT3	100	98.603	Otolemur_garnettii
ENSBTAG00000013173	SEPT3	100	99.162	ENSOARG00000018800	SEPT3	100	99.162	Ovis_aries
ENSBTAG00000013173	SEPT3	100	98.883	ENSPPAG00000013116	SEPT3	100	98.980	Pan_paniscus
ENSBTAG00000013173	SEPT3	100	98.603	ENSPPRG00000002117	SEPT3	100	98.980	Panthera_pardus
ENSBTAG00000013173	SEPT3	99	98.588	ENSPTIG00000011548	SEPT3	99	99.655	Panthera_tigris_altaica
ENSBTAG00000013173	SEPT3	100	98.883	ENSPTRG00000014444	SEPT3	100	98.980	Pan_troglodytes
ENSBTAG00000013173	SEPT3	100	98.883	ENSPANG00000009994	-	100	98.980	Papio_anubis
ENSBTAG00000013173	SEPT3	91	82.164	ENSPKIG00000002056	sept3	96	82.164	Paramormyrops_kingsleyae
ENSBTAG00000013173	SEPT3	91	96.605	ENSPSIG00000012269	SEPT3	96	96.605	Pelodiscus_sinensis
ENSBTAG00000013173	SEPT3	84	86.957	ENSPMGG00000006200	sept3	72	86.957	Periophthalmus_magnuspinnatus
ENSBTAG00000013173	SEPT3	98	98.854	ENSPEMG00000009916	Sept3	98	98.580	Peromyscus_maniculatus_bairdii
ENSBTAG00000013173	SEPT3	94	95.195	ENSPCIG00000004039	SEPT3	99	93.410	Phascolarctos_cinereus
ENSBTAG00000013173	SEPT3	94	82.647	ENSPFOG00000014541	sept3	96	82.647	Poecilia_formosa
ENSBTAG00000013173	SEPT3	84	88.294	ENSPLAG00000010228	sept3	72	87.171	Poecilia_latipinna
ENSBTAG00000013173	SEPT3	84	88.294	ENSPMEG00000019416	sept3	72	87.171	Poecilia_mexicana
ENSBTAG00000013173	SEPT3	86	86.842	ENSPREG00000012774	sept3	92	86.842	Poecilia_reticulata
ENSBTAG00000013173	SEPT3	100	89.944	ENSPPYG00000011886	SEPT3	100	89.944	Pongo_abelii
ENSBTAG00000013173	SEPT3	100	98.324	ENSPCOG00000024794	SEPT3	100	98.639	Propithecus_coquereli
ENSBTAG00000013173	SEPT3	100	97.765	ENSPVAG00000001191	SEPT3	100	97.765	Pteropus_vampyrus
ENSBTAG00000013173	SEPT3	84	87.291	ENSPNYG00000023957	sept3	73	87.291	Pundamilia_nyererei
ENSBTAG00000013173	SEPT3	91	83.792	ENSPNAG00000023001	sept3	96	83.792	Pygocentrus_nattereri
ENSBTAG00000013173	SEPT3	100	97.486	ENSRNOG00000007686	Sept3	100	97.486	Rattus_norvegicus
ENSBTAG00000013173	SEPT3	100	98.603	ENSRBIG00000040851	SEPT3	100	98.639	Rhinopithecus_bieti
ENSBTAG00000013173	SEPT3	99	91.854	ENSRROG00000042463	SEPT3	100	91.854	Rhinopithecus_roxellana
ENSBTAG00000013173	SEPT3	99	98.599	ENSSBOG00000024825	SEPT3	100	93.872	Saimiri_boliviensis_boliviensis
ENSBTAG00000013173	SEPT3	96	92.733	ENSSHAG00000012446	SEPT3	97	90.704	Sarcophilus_harrisii
ENSBTAG00000013173	SEPT3	91	81.375	ENSSFOG00015011047	sept3	96	81.948	Scleropages_formosus
ENSBTAG00000013173	SEPT3	84	86.288	ENSSMAG00000013826	sept3	73	86.288	Scophthalmus_maximus
ENSBTAG00000013173	SEPT3	84	88.294	ENSSDUG00000004549	sept3	72	88.294	Seriola_dumerili
ENSBTAG00000013173	SEPT3	84	88.294	ENSSLDG00000023869	sept3	72	88.294	Seriola_lalandi_dorsalis
ENSBTAG00000013173	SEPT3	97	89.888	ENSSPUG00000005948	SEPT3	99	89.888	Sphenodon_punctatus
ENSBTAG00000013173	SEPT3	100	97.765	ENSSSCG00000000040	SEPT3	100	97.765	Sus_scrofa
ENSBTAG00000013173	SEPT3	82	98.969	ENSTGUG00000009729	SEPT3	100	98.969	Taeniopygia_guttata
ENSBTAG00000013173	SEPT3	84	87.625	ENSTRUG00000000028	sept3	97	81.212	Takifugu_rubripes
ENSBTAG00000013173	SEPT3	84	86.957	ENSTNIG00000004228	sept3	96	86.957	Tetraodon_nigroviridis
ENSBTAG00000013173	SEPT3	100	98.883	ENSTTRG00000017358	SEPT3	100	98.883	Tursiops_truncatus
ENSBTAG00000013173	SEPT3	100	98.324	ENSUMAG00000020618	-	100	98.324	Ursus_maritimus
ENSBTAG00000013173	SEPT3	100	98.603	ENSVVUG00000002589	-	100	98.603	Vulpes_vulpes
ENSBTAG00000013173	SEPT3	92	92.988	ENSXETG00000000261	sept3	94	92.988	Xenopus_tropicalis
ENSBTAG00000013173	SEPT3	84	87.960	ENSXCOG00000013650	sept3	73	86.842	Xiphophorus_couchianus
ENSBTAG00000013173	SEPT3	84	87.960	ENSXMAG00000017559	sept3	89	87.960	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005525	GTP binding	-	IEA	Function
GO:0030054	cell junction	-	IEA	Component
GO:0031105	septin complex	-	ISS	Component
GO:0042802	identical protein binding	-	IEA	Function
GO:0098793	presynapse	-	ISS	Component