EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000013177 (Gene tree)
Gene ID: 511790
Gene Symbol: APEX2
Alias: -
Full Name: Bos taurus apurinic/apyrimidinic endodeoxyribonuclease 2 (APEX2)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 7803 bases
Position: chrX:92476249-92484051
Accession: NM_001015577
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000017537	Exo_endo_phos	PF03372.23	9.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000017537	-	2075	-	ENSBTAP00000017537	514 (aa)	-	F1MSK4

Gene Model

Click here to download ENSBTAG00000013177's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000013177's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000013177	APEX2	100	85.135	ENSG00000169188	APEX2	100	85.135	Homo_sapiens
ENSBTAG00000013177	APEX2	99	45.789	ENSAPOG00000005805	apex2	99	45.789	Acanthochromis_polyacanthus
ENSBTAG00000013177	APEX2	100	88.760	ENSAMEG00000003608	APEX2	100	88.760	Ailuropoda_melanoleuca
ENSBTAG00000013177	APEX2	99	46.329	ENSACIG00000010000	apex2	99	46.329	Amphilophus_citrinellus
ENSBTAG00000013177	APEX2	99	45.439	ENSAOCG00000021774	apex2	99	45.470	Amphiprion_ocellaris
ENSBTAG00000013177	APEX2	99	45.263	ENSAPEG00000020890	apex2	93	45.296	Amphiprion_percula
ENSBTAG00000013177	APEX2	99	45.455	ENSATEG00000023600	apex2	99	45.455	Anabas_testudineus
ENSBTAG00000013177	APEX2	99	51.838	ENSACAG00000011201	APEX2	99	51.838	Anolis_carolinensis
ENSBTAG00000013177	APEX2	100	84.749	ENSANAG00000021907	-	100	84.749	Aotus_nancymaae
ENSBTAG00000013177	APEX2	97	74.950	ENSANAG00000020845	-	100	74.950	Aotus_nancymaae
ENSBTAG00000013177	APEX2	99	45.310	ENSAMXG00000007422	apex2	99	45.841	Astyanax_mexicanus
ENSBTAG00000013177	APEX2	100	85.328	ENSCJAG00000016584	APEX2	100	85.328	Callithrix_jacchus
ENSBTAG00000013177	APEX2	100	88.544	ENSCAFG00000014310	APEX2	100	88.544	Canis_familiaris
ENSBTAG00000013177	APEX2	100	89.903	ENSCAFG00020013818	APEX2	100	89.903	Canis_lupus_dingo
ENSBTAG00000013177	APEX2	100	97.276	ENSCHIG00000019916	APEX2	100	97.276	Capra_hircus
ENSBTAG00000013177	APEX2	100	85.853	ENSTSYG00000005612	APEX2	100	85.853	Carlito_syrichta
ENSBTAG00000013177	APEX2	100	76.699	ENSCPOG00000007265	APEX2	100	77.476	Cavia_porcellus
ENSBTAG00000013177	APEX2	96	73.038	ENSCCAG00000025405	-	99	73.038	Cebus_capucinus
ENSBTAG00000013177	APEX2	100	83.591	ENSCATG00000044854	APEX2	100	83.591	Cercocebus_atys
ENSBTAG00000013177	APEX2	100	78.185	ENSCLAG00000017315	APEX2	100	78.185	Chinchilla_lanigera
ENSBTAG00000013177	APEX2	100	83.591	ENSCSAG00000012124	APEX2	100	83.591	Chlorocebus_sabaeus
ENSBTAG00000013177	APEX2	99	47.692	ENSCPBG00000016631	APEX2	99	48.047	Chrysemys_picta_bellii
ENSBTAG00000013177	APEX2	99	39.811	ENSCSAVG00000006052	-	99	39.811	Ciona_savignyi
ENSBTAG00000013177	APEX2	100	83.977	ENSCANG00000003053	APEX2	100	83.977	Colobus_angolensis_palliatus
ENSBTAG00000013177	APEX2	100	80.888	ENSCGRG00001008132	Apex2	100	80.888	Cricetulus_griseus_chok1gshd
ENSBTAG00000013177	APEX2	100	80.888	ENSCGRG00000009667	Apex2	100	80.888	Cricetulus_griseus_crigri
ENSBTAG00000013177	APEX2	99	45.918	ENSCSEG00000019900	apex2	98	45.918	Cynoglossus_semilaevis
ENSBTAG00000013177	APEX2	99	44.750	ENSCVAG00000021583	apex2	99	45.095	Cyprinodon_variegatus
ENSBTAG00000013177	APEX2	99	46.397	ENSDARG00000008472	apex2	99	47.100	Danio_rerio
ENSBTAG00000013177	APEX2	100	79.923	ENSDNOG00000038901	APEX2	100	79.923	Dasypus_novemcinctus
ENSBTAG00000013177	APEX2	99	45.809	ENSEBUG00000015654	apex2	99	45.809	Eptatretus_burgeri
ENSBTAG00000013177	APEX2	100	89.126	ENSEASG00005011694	APEX2	91	89.126	Equus_asinus_asinus
ENSBTAG00000013177	APEX2	100	89.126	ENSECAG00000026921	APEX2	91	89.126	Equus_caballus
ENSBTAG00000013177	APEX2	100	79.070	ENSEEUG00000013172	APEX2	100	79.070	Erinaceus_europaeus
ENSBTAG00000013177	APEX2	99	43.390	ENSELUG00000021417	apex2	99	43.390	Esox_lucius
ENSBTAG00000013177	APEX2	100	86.990	ENSFCAG00000021990	APEX2	100	86.990	Felis_catus
ENSBTAG00000013177	APEX2	100	80.502	ENSFDAG00000008076	APEX2	100	80.502	Fukomys_damarensis
ENSBTAG00000013177	APEX2	99	41.844	ENSFHEG00000021411	apex2	99	42.021	Fundulus_heteroclitus
ENSBTAG00000013177	APEX2	53	59.420	ENSGMOG00000019681	apex2	89	55.941	Gadus_morhua
ENSBTAG00000013177	APEX2	99	46.435	ENSGAFG00000005829	apex2	99	46.447	Gambusia_affinis
ENSBTAG00000013177	APEX2	60	62.963	ENSGACG00000012307	apex2	93	61.658	Gasterosteus_aculeatus
ENSBTAG00000013177	APEX2	86	46.104	ENSGAGG00000011520	APEX2	87	46.104	Gopherus_agassizii
ENSBTAG00000013177	APEX2	100	85.135	ENSGGOG00000002056	APEX2	100	85.135	Gorilla_gorilla
ENSBTAG00000013177	APEX2	99	46.239	ENSHBUG00000009938	apex2	99	47.156	Haplochromis_burtoni
ENSBTAG00000013177	APEX2	100	79.537	ENSHGLG00000000273	APEX2	100	79.537	Heterocephalus_glaber_female
ENSBTAG00000013177	APEX2	99	48.224	ENSHCOG00000010165	apex2	99	48.224	Hippocampus_comes
ENSBTAG00000013177	APEX2	99	44.295	ENSIPUG00000000352	APEX2	99	44.799	Ictalurus_punctatus
ENSBTAG00000013177	APEX2	100	83.591	ENSSTOG00000025121	APEX2	100	83.784	Ictidomys_tridecemlineatus
ENSBTAG00000013177	APEX2	100	80.888	ENSJJAG00000019611	Apex2	100	80.888	Jaculus_jaculus
ENSBTAG00000013177	APEX2	99	48.399	ENSKMAG00000006985	apex2	99	48.399	Kryptolebias_marmoratus
ENSBTAG00000013177	APEX2	99	45.172	ENSLBEG00000012139	apex2	99	45.172	Labrus_bergylta
ENSBTAG00000013177	APEX2	99	41.250	ENSLACG00000000865	APEX2	99	41.250	Latimeria_chalumnae
ENSBTAG00000013177	APEX2	99	45.848	ENSLOCG00000014467	apex2	99	46.194	Lepisosteus_oculatus
ENSBTAG00000013177	APEX2	100	83.915	ENSLAFG00000018312	APEX2	100	83.915	Loxodonta_africana
ENSBTAG00000013177	APEX2	100	83.784	ENSMFAG00000002486	APEX2	100	83.784	Macaca_fascicularis
ENSBTAG00000013177	APEX2	100	83.398	ENSMMUG00000008428	APEX2	100	83.398	Macaca_mulatta
ENSBTAG00000013177	APEX2	100	83.784	ENSMNEG00000036783	APEX2	100	83.784	Macaca_nemestrina
ENSBTAG00000013177	APEX2	100	83.591	ENSMLEG00000028208	APEX2	100	83.591	Mandrillus_leucophaeus
ENSBTAG00000013177	APEX2	99	43.973	ENSMAMG00000024220	apex2	99	43.973	Mastacembelus_armatus
ENSBTAG00000013177	APEX2	99	46.239	ENSMZEG00005026322	apex2	99	47.495	Maylandia_zebra
ENSBTAG00000013177	APEX2	100	82.819	ENSMICG00000043181	APEX2	100	82.819	Microcebus_murinus
ENSBTAG00000013177	APEX2	100	78.764	ENSMOCG00000004339	Apex2	100	79.923	Microtus_ochrogaster
ENSBTAG00000013177	APEX2	99	45.904	ENSMMOG00000017340	apex2	99	45.392	Mola_mola
ENSBTAG00000013177	APEX2	99	55.577	ENSMODG00000005341	APEX2	99	55.577	Monodelphis_domestica
ENSBTAG00000013177	APEX2	99	43.919	ENSMALG00000014179	apex2	99	43.919	Monopterus_albus
ENSBTAG00000013177	APEX2	100	79.497	MGP_CAROLIEiJ_G0033484	Apex2	100	81.132	Mus_caroli
ENSBTAG00000013177	APEX2	100	79.497	ENSMUSG00000025269	Apex2	99	81.132	Mus_musculus
ENSBTAG00000013177	APEX2	100	79.884	MGP_PahariEiJ_G0032023	Apex2	94	88.263	Mus_pahari
ENSBTAG00000013177	APEX2	100	79.691	MGP_SPRETEiJ_G0034654	Apex2	100	81.132	Mus_spretus
ENSBTAG00000013177	APEX2	100	87.184	ENSMPUG00000003293	APEX2	100	87.184	Mustela_putorius_furo
ENSBTAG00000013177	APEX2	100	79.806	ENSMLUG00000004562	-	100	79.806	Myotis_lucifugus
ENSBTAG00000013177	APEX2	100	82.524	ENSMLUG00000016298	-	100	82.524	Myotis_lucifugus
ENSBTAG00000013177	APEX2	100	80.309	ENSNGAG00000013576	Apex2	100	80.309	Nannospalax_galili
ENSBTAG00000013177	APEX2	99	44.231	ENSNBRG00000010099	apex2	99	44.930	Neolamprologus_brichardi
ENSBTAG00000013177	APEX2	81	89.723	ENSNLEG00000032067	-	100	89.723	Nomascus_leucogenys
ENSBTAG00000013177	APEX2	99	47.448	ENSONIG00000016881	apex2	99	48.204	Oreochromis_niloticus
ENSBTAG00000013177	APEX2	89	52.857	ENSOANG00000000689	-	95	52.857	Ornithorhynchus_anatinus
ENSBTAG00000013177	APEX2	100	71.291	ENSOCUG00000000570	APEX2	100	71.291	Oryctolagus_cuniculus
ENSBTAG00000013177	APEX2	99	46.536	ENSORLG00000014053	apex2	99	46.536	Oryzias_latipes
ENSBTAG00000013177	APEX2	99	45.855	ENSORLG00020013253	apex2	99	45.855	Oryzias_latipes_hni
ENSBTAG00000013177	APEX2	99	46.536	ENSORLG00015007515	apex2	99	46.536	Oryzias_latipes_hsok
ENSBTAG00000013177	APEX2	99	44.876	ENSOMEG00000003655	apex2	99	44.876	Oryzias_melastigma
ENSBTAG00000013177	APEX2	99	83.463	ENSOGAG00000007797	APEX2	99	83.463	Otolemur_garnettii
ENSBTAG00000013177	APEX2	100	97.082	ENSOARG00000005742	APEX2	100	97.082	Ovis_aries
ENSBTAG00000013177	APEX2	100	85.328	ENSPPAG00000035747	APEX2	100	85.328	Pan_paniscus
ENSBTAG00000013177	APEX2	100	87.184	ENSPPRG00000002440	APEX2	100	87.184	Panthera_pardus
ENSBTAG00000013177	APEX2	100	86.796	ENSPTIG00000021651	APEX2	100	86.796	Panthera_tigris_altaica
ENSBTAG00000013177	APEX2	100	85.521	ENSPTRG00000021946	APEX2	100	85.521	Pan_troglodytes
ENSBTAG00000013177	APEX2	100	83.398	ENSPANG00000003595	APEX2	100	83.398	Papio_anubis
ENSBTAG00000013177	APEX2	99	46.397	ENSPKIG00000007752	apex2	99	46.749	Paramormyrops_kingsleyae
ENSBTAG00000013177	APEX2	99	44.544	ENSPMGG00000009151	apex2	99	44.544	Periophthalmus_magnuspinnatus
ENSBTAG00000013177	APEX2	100	80.116	ENSPEMG00000016475	Apex2	100	80.116	Peromyscus_maniculatus_bairdii
ENSBTAG00000013177	APEX2	99	53.668	ENSPCIG00000007633	APEX2	98	54.403	Phascolarctos_cinereus
ENSBTAG00000013177	APEX2	99	46.609	ENSPFOG00000000408	apex2	99	46.783	Poecilia_formosa
ENSBTAG00000013177	APEX2	99	46.609	ENSPLAG00000023814	apex2	99	46.783	Poecilia_latipinna
ENSBTAG00000013177	APEX2	99	46.354	ENSPMEG00000023222	apex2	99	46.528	Poecilia_mexicana
ENSBTAG00000013177	APEX2	100	85.328	ENSPPYG00000020388	APEX2	100	85.328	Pongo_abelii
ENSBTAG00000013177	APEX2	100	84.942	ENSPCOG00000016083	APEX2	100	84.942	Propithecus_coquereli
ENSBTAG00000013177	APEX2	90	88.745	ENSPVAG00000007851	APEX2	100	88.745	Pteropus_vampyrus
ENSBTAG00000013177	APEX2	99	44.211	ENSPNYG00000015698	apex2	99	45.088	Pundamilia_nyererei
ENSBTAG00000013177	APEX2	99	44.054	ENSPNAG00000011666	apex2	99	44.054	Pygocentrus_nattereri
ENSBTAG00000013177	APEX2	100	78.530	ENSRNOG00000000166	Apex2	100	78.530	Rattus_norvegicus
ENSBTAG00000013177	APEX2	100	83.784	ENSRBIG00000036500	APEX2	100	83.784	Rhinopithecus_bieti
ENSBTAG00000013177	APEX2	100	83.977	ENSRROG00000032674	APEX2	100	83.977	Rhinopithecus_roxellana
ENSBTAG00000013177	APEX2	100	84.170	ENSSBOG00000030500	-	100	84.942	Saimiri_boliviensis_boliviensis
ENSBTAG00000013177	APEX2	96	68.273	ENSSBOG00000003489	-	99	68.273	Saimiri_boliviensis_boliviensis
ENSBTAG00000013177	APEX2	99	54.492	ENSSHAG00000007846	APEX2	99	54.492	Sarcophilus_harrisii
ENSBTAG00000013177	APEX2	99	48.807	ENSSFOG00015010354	apex2	99	49.540	Scleropages_formosus
ENSBTAG00000013177	APEX2	99	45.201	ENSSMAG00000012753	apex2	99	45.550	Scophthalmus_maximus
ENSBTAG00000013177	APEX2	99	45.648	ENSSDUG00000022892	apex2	99	45.648	Seriola_dumerili
ENSBTAG00000013177	APEX2	99	46.055	ENSSLDG00000024347	apex2	99	46.606	Seriola_lalandi_dorsalis
ENSBTAG00000013177	APEX2	100	77.027	ENSSARG00000010297	APEX2	100	77.027	Sorex_araneus
ENSBTAG00000013177	APEX2	99	45.884	ENSSPAG00000016279	apex2	99	46.235	Stegastes_partitus
ENSBTAG00000013177	APEX2	100	88.544	ENSSSCG00000012348	-	100	88.544	Sus_scrofa
ENSBTAG00000013177	APEX2	99	44.894	ENSTRUG00000015660	apex2	99	44.894	Takifugu_rubripes
ENSBTAG00000013177	APEX2	81	46.172	ENSTNIG00000003725	apex2	100	46.172	Tetraodon_nigroviridis
ENSBTAG00000013177	APEX2	90	82.366	ENSTBEG00000010520	APEX2	100	82.366	Tupaia_belangeri
ENSBTAG00000013177	APEX2	100	89.126	ENSUAMG00000004720	APEX2	100	89.126	Ursus_americanus
ENSBTAG00000013177	APEX2	100	84.272	ENSUMAG00000002892	APEX2	100	84.272	Ursus_maritimus
ENSBTAG00000013177	APEX2	100	88.932	ENSVVUG00000005989	APEX2	100	88.932	Vulpes_vulpes
ENSBTAG00000013177	APEX2	99	47.448	ENSXETG00000022026	apex2	98	47.448	Xenopus_tropicalis
ENSBTAG00000013177	APEX2	99	47.120	ENSXMAG00000025740	apex2	99	47.469	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	IEA	Function
GO:0004519	endonuclease activity	-	IEA	Function
GO:0005739	mitochondrion	-	IEA	Component
GO:0006310	DNA recombination	-	IEA	Process
GO:0007049	cell cycle	-	IEA	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0090305	nucleic acid phosphodiester bond hydrolysis	-	IEA	Process
GO:0140078	class I DNA-(apurinic or apyrimidinic site) endonuclease activity	-	IEA	Function