EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000013259 (Gene tree)
Gene ID: 540308
Gene Symbol: POLR3A
Alias: -
Full Name: Bos taurus RNA polymerase III subunit A (POLR3A)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 49151 bases
Position: chr28:33674813-33723963
Accession: NM_001083750
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000068211	RNA_pol_Rpb1_5	PF04998.17	4.2e-89	1	1
ENSBTAP00000017638	RNA_pol_Rpb1_5	PF04998.17	4.2e-89	1	1
ENSBTAP00000068211	RNA_pol_Rpb1_4	PF05000.17	5e-32	1	1
ENSBTAP00000017638	RNA_pol_Rpb1_4	PF05000.17	5.1e-32	1	1
ENSBTAP00000068211	RNA_pol_Rpb1_2	PF00623.20	4.4e-75	1	1
ENSBTAP00000017638	RNA_pol_Rpb1_2	PF00623.20	4.4e-75	1	1
ENSBTAP00000068211	RNA_pol_Rpb1_3	PF04983.18	5e-42	1	1
ENSBTAP00000017638	RNA_pol_Rpb1_3	PF04983.18	5e-42	1	1
ENSBTAP00000017638	RNA_pol_Rpb1_1	PF04997.12	1.6e-96	1	1
ENSBTAP00000068211	RNA_pol_Rpb1_1	PF04997.12	1.8e-96	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000079490	-	4173	-	ENSBTAP00000068211	1390 (aa)	-	-
ENSBTAT00000017638	-	7260	-	ENSBTAP00000017638	1390 (aa)	-	A4IF62

Gene Model

Click here to download ENSBTAG00000013259's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03020	RNA polymerase	KEGG
bta04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000013259's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000013259	POLR3A	98	34.003	ENSBTAG00000046765	POLR2A	66	38.411
ENSBTAG00000013259	POLR3A	74	31.749	ENSBTAG00000006481	POLR1A	72	31.781

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000013259	POLR3A	100	98.417	ENSG00000148606	POLR3A	100	98.417	Homo_sapiens
ENSBTAG00000013259	POLR3A	62	86.411	ENSAPOG00000022727	polr3a	99	86.411	Acanthochromis_polyacanthus
ENSBTAG00000013259	POLR3A	100	98.134	ENSAMEG00000017801	POLR3A	100	98.134	Ailuropoda_melanoleuca
ENSBTAG00000013259	POLR3A	93	90.671	ENSACIG00000024504	polr3a	97	90.671	Amphilophus_citrinellus
ENSBTAG00000013259	POLR3A	100	90.576	ENSAOCG00000002071	polr3a	100	90.576	Amphiprion_ocellaris
ENSBTAG00000013259	POLR3A	100	87.266	ENSAOCG00000003949	-	100	87.266	Amphiprion_ocellaris
ENSBTAG00000013259	POLR3A	100	90.576	ENSAPEG00000013351	polr3a	100	90.576	Amphiprion_percula
ENSBTAG00000013259	POLR3A	100	90.432	ENSAPEG00000001966	-	100	90.432	Amphiprion_percula
ENSBTAG00000013259	POLR3A	100	90.144	ENSATEG00000023277	polr3a	100	90.144	Anabas_testudineus
ENSBTAG00000013259	POLR3A	99	96.218	ENSAPLG00000015878	POLR3A	99	96.218	Anas_platyrhynchos
ENSBTAG00000013259	POLR3A	93	94.041	ENSACAG00000007985	POLR3A	99	94.041	Anolis_carolinensis
ENSBTAG00000013259	POLR3A	100	95.621	ENSANAG00000028922	POLR3A	96	100.000	Aotus_nancymaae
ENSBTAG00000013259	POLR3A	100	89.640	ENSACLG00000005914	polr3a	100	89.640	Astatotilapia_calliptera
ENSBTAG00000013259	POLR3A	100	87.122	ENSAMXG00000018852	polr3a	100	87.122	Astyanax_mexicanus
ENSBTAG00000013259	POLR3A	99	57.011	WBGene00004411	rpc-1	99	57.011	Caenorhabditis_elegans
ENSBTAG00000013259	POLR3A	100	98.417	ENSCJAG00000001015	POLR3A	100	98.417	Callithrix_jacchus
ENSBTAG00000013259	POLR3A	100	98.489	ENSCAFG00000015546	POLR3A	100	98.489	Canis_familiaris
ENSBTAG00000013259	POLR3A	100	98.489	ENSCAFG00020014711	POLR3A	100	98.489	Canis_lupus_dingo
ENSBTAG00000013259	POLR3A	100	99.281	ENSCHIG00000000352	POLR3A	100	99.281	Capra_hircus
ENSBTAG00000013259	POLR3A	100	97.842	ENSTSYG00000006671	POLR3A	100	97.842	Carlito_syrichta
ENSBTAG00000013259	POLR3A	99	97.164	ENSCAPG00000016031	POLR3A	100	97.164	Cavia_aperea
ENSBTAG00000013259	POLR3A	100	97.194	ENSCPOG00000022387	POLR3A	100	97.194	Cavia_porcellus
ENSBTAG00000013259	POLR3A	100	96.187	ENSCCAG00000032995	POLR3A	100	96.187	Cebus_capucinus
ENSBTAG00000013259	POLR3A	100	98.201	ENSCATG00000035842	POLR3A	100	98.201	Cercocebus_atys
ENSBTAG00000013259	POLR3A	100	97.266	ENSCLAG00000009629	POLR3A	100	97.266	Chinchilla_lanigera
ENSBTAG00000013259	POLR3A	100	98.345	ENSCSAG00000009292	POLR3A	100	98.345	Chlorocebus_sabaeus
ENSBTAG00000013259	POLR3A	81	88.095	ENSCHOG00000008368	POLR3A	95	88.095	Choloepus_hoffmanni
ENSBTAG00000013259	POLR3A	99	95.608	ENSCPBG00000002079	POLR3A	99	95.608	Chrysemys_picta_bellii
ENSBTAG00000013259	POLR3A	99	69.452	ENSCSAVG00000009925	-	99	69.452	Ciona_savignyi
ENSBTAG00000013259	POLR3A	86	96.535	ENSCANG00000041071	POLR3A	98	98.734	Colobus_angolensis_palliatus
ENSBTAG00000013259	POLR3A	78	98.385	ENSCGRG00001015599	-	92	98.385	Cricetulus_griseus_chok1gshd
ENSBTAG00000013259	POLR3A	88	97.458	ENSCGRG00000001019	Polr3a	100	97.458	Cricetulus_griseus_crigri
ENSBTAG00000013259	POLR3A	100	89.856	ENSCSEG00000016653	polr3a	100	89.856	Cynoglossus_semilaevis
ENSBTAG00000013259	POLR3A	100	89.712	ENSCVAG00000023049	polr3a	100	89.712	Cyprinodon_variegatus
ENSBTAG00000013259	POLR3A	99	90.202	ENSDARG00000102569	polr3a	99	90.202	Danio_rerio
ENSBTAG00000013259	POLR3A	100	97.626	ENSDNOG00000010194	POLR3A	100	97.626	Dasypus_novemcinctus
ENSBTAG00000013259	POLR3A	100	98.345	ENSDORG00000000184	Polr3a	100	98.345	Dipodomys_ordii
ENSBTAG00000013259	POLR3A	99	57.453	FBgn0030687	CG17209	99	57.453	Drosophila_melanogaster
ENSBTAG00000013259	POLR3A	88	97.571	ENSETEG00000007477	POLR3A	89	97.571	Echinops_telfairi
ENSBTAG00000013259	POLR3A	59	76.581	ENSEBUG00000013761	polr3a	98	76.581	Eptatretus_burgeri
ENSBTAG00000013259	POLR3A	100	98.849	ENSEASG00005023053	POLR3A	100	98.849	Equus_asinus_asinus
ENSBTAG00000013259	POLR3A	97	98.659	ENSECAG00000019416	POLR3A	100	98.832	Equus_caballus
ENSBTAG00000013259	POLR3A	96	93.289	ENSEEUG00000001774	POLR3A	100	93.289	Erinaceus_europaeus
ENSBTAG00000013259	POLR3A	100	88.299	ENSELUG00000014016	polr3a	100	88.299	Esox_lucius
ENSBTAG00000013259	POLR3A	100	98.777	ENSFCAG00000000843	POLR3A	100	98.777	Felis_catus
ENSBTAG00000013259	POLR3A	100	95.974	ENSFALG00000006913	POLR3A	100	95.974	Ficedula_albicollis
ENSBTAG00000013259	POLR3A	100	97.338	ENSFDAG00000007813	POLR3A	100	97.338	Fukomys_damarensis
ENSBTAG00000013259	POLR3A	95	90.000	ENSFHEG00000011922	polr3a	99	90.000	Fundulus_heteroclitus
ENSBTAG00000013259	POLR3A	100	85.018	ENSGMOG00000000291	polr3a	99	85.018	Gadus_morhua
ENSBTAG00000013259	POLR3A	100	96.259	ENSGALG00000004947	POLR3A	100	96.259	Gallus_gallus
ENSBTAG00000013259	POLR3A	100	89.784	ENSGAFG00000005112	polr3a	100	89.784	Gambusia_affinis
ENSBTAG00000013259	POLR3A	100	89.640	ENSGACG00000002304	polr3a	100	89.640	Gasterosteus_aculeatus
ENSBTAG00000013259	POLR3A	95	95.685	ENSGAGG00000010386	POLR3A	98	95.685	Gopherus_agassizii
ENSBTAG00000013259	POLR3A	99	97.397	ENSGGOG00000027729	POLR3A	100	98.553	Gorilla_gorilla
ENSBTAG00000013259	POLR3A	100	89.640	ENSHBUG00000018098	polr3a	100	89.640	Haplochromis_burtoni
ENSBTAG00000013259	POLR3A	100	97.266	ENSHGLG00000017899	POLR3A	100	97.266	Heterocephalus_glaber_female
ENSBTAG00000013259	POLR3A	100	97.266	ENSHGLG00100008483	POLR3A	100	97.266	Heterocephalus_glaber_male
ENSBTAG00000013259	POLR3A	100	88.993	ENSHCOG00000001075	polr3a	100	88.993	Hippocampus_comes
ENSBTAG00000013259	POLR3A	100	98.345	ENSSTOG00000012983	POLR3A	100	98.345	Ictidomys_tridecemlineatus
ENSBTAG00000013259	POLR3A	100	89.856	ENSKMAG00000015290	polr3a	100	89.856	Kryptolebias_marmoratus
ENSBTAG00000013259	POLR3A	99	89.057	ENSLBEG00000017214	polr3a	99	89.057	Labrus_bergylta
ENSBTAG00000013259	POLR3A	97	89.963	ENSLACG00000018557	POLR3A	99	89.963	Latimeria_chalumnae
ENSBTAG00000013259	POLR3A	100	92.103	ENSLOCG00000004942	polr3a	100	92.103	Lepisosteus_oculatus
ENSBTAG00000013259	POLR3A	100	96.477	ENSLAFG00000016719	POLR3A	100	96.477	Loxodonta_africana
ENSBTAG00000013259	POLR3A	100	98.273	ENSMFAG00000032218	POLR3A	100	98.273	Macaca_fascicularis
ENSBTAG00000013259	POLR3A	100	98.273	ENSMMUG00000005514	POLR3A	100	98.273	Macaca_mulatta
ENSBTAG00000013259	POLR3A	99	91.439	ENSMNEG00000035163	POLR3A	99	98.132	Macaca_nemestrina
ENSBTAG00000013259	POLR3A	100	93.678	ENSMLEG00000030014	POLR3A	98	99.367	Mandrillus_leucophaeus
ENSBTAG00000013259	POLR3A	100	90.000	ENSMAMG00000017497	polr3a	100	90.000	Mastacembelus_armatus
ENSBTAG00000013259	POLR3A	100	89.640	ENSMZEG00005000576	polr3a	100	89.640	Maylandia_zebra
ENSBTAG00000013259	POLR3A	100	78.143	ENSMGAG00000005713	-	100	78.143	Meleagris_gallopavo
ENSBTAG00000013259	POLR3A	100	95.971	ENSMAUG00000016247	Polr3a	100	95.971	Mesocricetus_auratus
ENSBTAG00000013259	POLR3A	100	98.633	ENSMICG00000005937	POLR3A	100	99.044	Microcebus_murinus
ENSBTAG00000013259	POLR3A	100	97.914	ENSMOCG00000012185	Polr3a	100	97.914	Microtus_ochrogaster
ENSBTAG00000013259	POLR3A	100	89.209	ENSMMOG00000013822	polr3a	100	89.209	Mola_mola
ENSBTAG00000013259	POLR3A	100	97.410	ENSMODG00000001036	POLR3A	100	97.410	Monodelphis_domestica
ENSBTAG00000013259	POLR3A	100	89.496	ENSMALG00000001249	polr3a	100	89.496	Monopterus_albus
ENSBTAG00000013259	POLR3A	100	98.058	MGP_CAROLIEiJ_G0019016	Polr3a	100	98.058	Mus_caroli
ENSBTAG00000013259	POLR3A	100	98.058	ENSMUSG00000025280	Polr3a	100	98.058	Mus_musculus
ENSBTAG00000013259	POLR3A	100	97.914	MGP_PahariEiJ_G0030029	Polr3a	100	97.914	Mus_pahari
ENSBTAG00000013259	POLR3A	100	95.468	MGP_SPRETEiJ_G0019894	Polr3a	97	99.010	Mus_spretus
ENSBTAG00000013259	POLR3A	100	97.789	ENSMPUG00000003790	POLR3A	100	97.789	Mustela_putorius_furo
ENSBTAG00000013259	POLR3A	100	97.698	ENSMLUG00000011522	POLR3A	100	97.698	Myotis_lucifugus
ENSBTAG00000013259	POLR3A	100	96.115	ENSNGAG00000015863	Polr3a	100	96.115	Nannospalax_galili
ENSBTAG00000013259	POLR3A	100	88.345	ENSNBRG00000014262	polr3a	100	88.345	Neolamprologus_brichardi
ENSBTAG00000013259	POLR3A	88	92.208	ENSNLEG00000010501	POLR3A	92	92.208	Nomascus_leucogenys
ENSBTAG00000013259	POLR3A	99	84.727	ENSMEUG00000012446	POLR3A	100	84.727	Notamacropus_eugenii
ENSBTAG00000013259	POLR3A	100	92.806	ENSOPRG00000001880	-	100	92.806	Ochotona_princeps
ENSBTAG00000013259	POLR3A	100	95.755	ENSODEG00000015146	POLR3A	100	95.755	Octodon_degus
ENSBTAG00000013259	POLR3A	100	90.072	ENSONIG00000016129	polr3a	100	90.072	Oreochromis_niloticus
ENSBTAG00000013259	POLR3A	98	96.932	ENSOANG00000007013	POLR3A	100	96.932	Ornithorhynchus_anatinus
ENSBTAG00000013259	POLR3A	100	97.698	ENSOCUG00000012450	POLR3A	100	97.698	Oryctolagus_cuniculus
ENSBTAG00000013259	POLR3A	100	89.928	ENSORLG00000008958	polr3a	100	89.928	Oryzias_latipes
ENSBTAG00000013259	POLR3A	100	87.698	ENSORLG00020007525	polr3a	98	90.238	Oryzias_latipes_hni
ENSBTAG00000013259	POLR3A	100	89.784	ENSORLG00015006633	polr3a	100	89.784	Oryzias_latipes_hsok
ENSBTAG00000013259	POLR3A	100	88.849	ENSOMEG00000012865	polr3a	100	88.849	Oryzias_melastigma
ENSBTAG00000013259	POLR3A	100	98.273	ENSOGAG00000010995	POLR3A	100	98.273	Otolemur_garnettii
ENSBTAG00000013259	POLR3A	100	99.425	ENSOARG00000009656	POLR3A	100	99.425	Ovis_aries
ENSBTAG00000013259	POLR3A	100	98.777	ENSPPRG00000002128	POLR3A	100	98.777	Panthera_pardus
ENSBTAG00000013259	POLR3A	100	98.777	ENSPTIG00000020916	POLR3A	100	98.777	Panthera_tigris_altaica
ENSBTAG00000013259	POLR3A	100	98.345	ENSPTRG00000002664	POLR3A	100	98.345	Pan_troglodytes
ENSBTAG00000013259	POLR3A	100	98.201	ENSPANG00000022508	POLR3A	100	98.201	Papio_anubis
ENSBTAG00000013259	POLR3A	100	91.583	ENSPKIG00000008140	polr3a	100	91.583	Paramormyrops_kingsleyae
ENSBTAG00000013259	POLR3A	98	95.544	ENSPSIG00000002092	POLR3A	100	95.544	Pelodiscus_sinensis
ENSBTAG00000013259	POLR3A	100	97.986	ENSPEMG00000006768	Polr3a	100	97.986	Peromyscus_maniculatus_bairdii
ENSBTAG00000013259	POLR3A	100	97.410	ENSPCIG00000015842	POLR3A	100	97.410	Phascolarctos_cinereus
ENSBTAG00000013259	POLR3A	54	91.141	ENSPFOG00000006458	polr3a	100	91.141	Poecilia_formosa
ENSBTAG00000013259	POLR3A	100	90.000	ENSPLAG00000000997	polr3a	100	90.000	Poecilia_latipinna
ENSBTAG00000013259	POLR3A	100	89.928	ENSPMEG00000006821	polr3a	100	89.928	Poecilia_mexicana
ENSBTAG00000013259	POLR3A	100	89.856	ENSPREG00000002385	polr3a	100	89.856	Poecilia_reticulata
ENSBTAG00000013259	POLR3A	93	98.221	ENSPPYG00000002305	POLR3A	99	98.221	Pongo_abelii
ENSBTAG00000013259	POLR3A	79	96.026	ENSPCAG00000005690	POLR3A	82	96.026	Procavia_capensis
ENSBTAG00000013259	POLR3A	100	98.345	ENSPCOG00000028311	POLR3A	100	98.345	Propithecus_coquereli
ENSBTAG00000013259	POLR3A	100	97.194	ENSPVAG00000015553	POLR3A	100	97.194	Pteropus_vampyrus
ENSBTAG00000013259	POLR3A	100	89.640	ENSPNYG00000020987	polr3a	100	89.640	Pundamilia_nyererei
ENSBTAG00000013259	POLR3A	99	86.105	ENSPNAG00000006629	polr3a	99	86.105	Pygocentrus_nattereri
ENSBTAG00000013259	POLR3A	100	97.842	ENSRNOG00000010008	Polr3a	100	97.842	Rattus_norvegicus
ENSBTAG00000013259	POLR3A	100	93.885	ENSRBIG00000034967	POLR3A	98	99.367	Rhinopithecus_bieti
ENSBTAG00000013259	POLR3A	100	98.129	ENSRROG00000025527	POLR3A	100	98.129	Rhinopithecus_roxellana
ENSBTAG00000013259	POLR3A	98	50.520	YOR116C	RPO31	99	50.381	Saccharomyces_cerevisiae
ENSBTAG00000013259	POLR3A	100	98.489	ENSSBOG00000022199	POLR3A	100	98.489	Saimiri_boliviensis_boliviensis
ENSBTAG00000013259	POLR3A	100	97.266	ENSSHAG00000007588	POLR3A	94	97.266	Sarcophilus_harrisii
ENSBTAG00000013259	POLR3A	100	91.942	ENSSFOG00015014357	polr3a	100	91.942	Scleropages_formosus
ENSBTAG00000013259	POLR3A	100	89.640	ENSSMAG00000001780	polr3a	100	89.640	Scophthalmus_maximus
ENSBTAG00000013259	POLR3A	100	90.360	ENSSDUG00000019840	polr3a	100	90.360	Seriola_dumerili
ENSBTAG00000013259	POLR3A	100	90.360	ENSSLDG00000023908	polr3a	100	90.360	Seriola_lalandi_dorsalis
ENSBTAG00000013259	POLR3A	69	99.060	ENSSARG00000009916	POLR3A	89	99.060	Sorex_araneus
ENSBTAG00000013259	POLR3A	100	93.525	ENSSPUG00000013209	POLR3A	100	93.525	Sphenodon_punctatus
ENSBTAG00000013259	POLR3A	100	90.432	ENSSPAG00000017712	polr3a	100	90.432	Stegastes_partitus
ENSBTAG00000013259	POLR3A	100	98.921	ENSSSCG00000010327	POLR3A	100	98.936	Sus_scrofa
ENSBTAG00000013259	POLR3A	100	95.899	ENSTGUG00000006423	-	100	95.899	Taeniopygia_guttata
ENSBTAG00000013259	POLR3A	100	89.424	ENSTRUG00000013488	polr3a	100	89.424	Takifugu_rubripes
ENSBTAG00000013259	POLR3A	100	89.655	ENSTNIG00000013151	polr3a	100	89.655	Tetraodon_nigroviridis
ENSBTAG00000013259	POLR3A	71	97.101	ENSTBEG00000015288	POLR3A	75	97.101	Tupaia_belangeri
ENSBTAG00000013259	POLR3A	96	98.699	ENSTTRG00000007817	POLR3A	100	98.699	Tursiops_truncatus
ENSBTAG00000013259	POLR3A	100	96.115	ENSUAMG00000011283	POLR3A	100	96.115	Ursus_americanus
ENSBTAG00000013259	POLR3A	100	98.489	ENSUMAG00000013913	POLR3A	100	98.489	Ursus_maritimus
ENSBTAG00000013259	POLR3A	99	90.400	ENSVPAG00000003285	POLR3A	100	90.400	Vicugna_pacos
ENSBTAG00000013259	POLR3A	100	98.417	ENSVVUG00000025523	POLR3A	100	98.417	Vulpes_vulpes
ENSBTAG00000013259	POLR3A	86	92.314	ENSXETG00000018101	polr3a	100	92.314	Xenopus_tropicalis
ENSBTAG00000013259	POLR3A	100	89.928	ENSXMAG00000015213	polr3a	100	89.928	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	IEA	Function
GO:0003682	chromatin binding	-	IEA	Function
GO:0005654	nucleoplasm	-	IEA	Component
GO:0006383	transcription by RNA polymerase III	-	IEA	Process
GO:0032728	positive regulation of interferon-beta production	-	ISS	Process
GO:0045087	innate immune response	-	ISS	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0051607	defense response to virus	-	IEA	Process