EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000013309 (Gene tree)
Gene ID: 614310
Gene Symbol: SRSF4
Alias: -
Full Name: Bos taurus serine and arginine rich splicing factor 4 (SRSF4)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 25750 bases
Position: chr2:124374950-124400699
Accession: NM_001101231
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000037803	RRM_1	PF00076.22	3.6e-31	1	2
ENSBTAP00000037803	RRM_1	PF00076.22	3.6e-31	2	2
ENSBTAP00000056714	RRM_1	PF00076.22	1.5e-21	1	2
ENSBTAP00000056714	RRM_1	PF00076.22	1.5e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000067183	-	2607	XM_010802598	ENSBTAP00000056714	479 (aa)	XP_010800900	UPI00005BBDF2
ENSBTAT00000037984	-	2269	-	ENSBTAP00000037803	493 (aa)	-	A7MB38

Gene Model

Click here to download ENSBTAG00000013309's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03040	Spliceosome	KEGG
bta05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000013309's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000013309	SRSF4	92	88.503	ENSG00000116350	SRSF4	92	90.022	Homo_sapiens
ENSBTAG00000013309	SRSF4	92	86.170	ENSAMEG00000000594	SRSF4	65	96.000	Ailuropoda_melanoleuca
ENSBTAG00000013309	SRSF4	87	71.667	ENSAPLG00000006595	-	65	80.069	Anas_platyrhynchos
ENSBTAG00000013309	SRSF4	87	86.047	ENSANAG00000037134	SRSF4	100	81.465	Aotus_nancymaae
ENSBTAG00000013309	SRSF4	92	86.724	ENSCJAG00000047192	SRSF4	92	88.223	Callithrix_jacchus
ENSBTAG00000013309	SRSF4	89	85.421	ENSCAFG00000011669	SRSF4	90	87.156	Canis_familiaris
ENSBTAG00000013309	SRSF4	89	87.045	ENSCAFG00020023963	SRSF4	89	88.128	Canis_lupus_dingo
ENSBTAG00000013309	SRSF4	100	92.734	ENSCHIG00000022096	SRSF4	93	91.942	Capra_hircus
ENSBTAG00000013309	SRSF4	92	87.636	ENSTSYG00000007903	SRSF4	92	85.558	Carlito_syrichta
ENSBTAG00000013309	SRSF4	92	77.660	ENSCPOG00000036234	SRSF4	65	85.627	Cavia_porcellus
ENSBTAG00000013309	SRSF4	69	82.267	ENSCCAG00000033585	SRSF4	90	84.302	Cebus_capucinus
ENSBTAG00000013309	SRSF4	92	88.503	ENSCATG00000031440	SRSF4	92	90.022	Cercocebus_atys
ENSBTAG00000013309	SRSF4	92	83.547	ENSCLAG00000009008	SRSF4	92	83.262	Chinchilla_lanigera
ENSBTAG00000013309	SRSF4	92	88.937	ENSCSAG00000001022	SRSF4	92	90.456	Chlorocebus_sabaeus
ENSBTAG00000013309	SRSF4	87	80.562	ENSCHOG00000013858	SRSF4	64	90.657	Choloepus_hoffmanni
ENSBTAG00000013309	SRSF4	68	83.631	ENSCPBG00000009020	SRSF4	65	89.634	Chrysemys_picta_bellii
ENSBTAG00000013309	SRSF4	62	45.566	ENSCING00000024718	-	56	60.417	Ciona_intestinalis
ENSBTAG00000013309	SRSF4	92	88.937	ENSCANG00000028667	SRSF4	92	90.456	Colobus_angolensis_palliatus
ENSBTAG00000013309	SRSF4	65	94.427	ENSCGRG00001021115	Srsf4	92	83.080	Cricetulus_griseus_chok1gshd
ENSBTAG00000013309	SRSF4	60	93.728	ENSCGRG00000014137	Srsf4	91	81.647	Cricetulus_griseus_crigri
ENSBTAG00000013309	SRSF4	92	80.632	ENSDNOG00000047961	SRSF4	64	94.190	Dasypus_novemcinctus
ENSBTAG00000013309	SRSF4	66	74.769	ENSDORG00000002459	Srsf4	85	72.365	Dipodomys_ordii
ENSBTAG00000013309	SRSF4	92	89.744	ENSEASG00005010168	SRSF4	92	91.453	Equus_asinus_asinus
ENSBTAG00000013309	SRSF4	92	89.744	ENSECAG00000021350	SRSF4	92	91.453	Equus_caballus
ENSBTAG00000013309	SRSF4	59	96.194	ENSEEUG00000008479	SRSF4	92	87.965	Erinaceus_europaeus
ENSBTAG00000013309	SRSF4	92	91.485	ENSFCAG00000027821	SRSF4	92	91.703	Felis_catus
ENSBTAG00000013309	SRSF4	92	72.687	ENSFALG00000001346	SRSF4	66	83.333	Ficedula_albicollis
ENSBTAG00000013309	SRSF4	61	81.544	ENSFDAG00000007332	SRSF4	92	78.140	Fukomys_damarensis
ENSBTAG00000013309	SRSF4	52	71.206	ENSFHEG00000007472	srsf4	90	86.905	Fundulus_heteroclitus
ENSBTAG00000013309	SRSF4	92	74.725	ENSGALG00000050314	SRSF4	68	82.012	Gallus_gallus
ENSBTAG00000013309	SRSF4	57	94.681	ENSGAGG00000014836	SRSF4	65	89.297	Gopherus_agassizii
ENSBTAG00000013309	SRSF4	92	88.720	ENSGGOG00000002444	SRSF4	92	90.239	Gorilla_gorilla
ENSBTAG00000013309	SRSF4	60	87.500	ENSHGLG00000011842	SRSF4	92	82.751	Heterocephalus_glaber_female
ENSBTAG00000013309	SRSF4	60	87.500	ENSHGLG00100017279	SRSF4	92	82.751	Heterocephalus_glaber_male
ENSBTAG00000013309	SRSF4	62	89.394	ENSHCOG00000012540	srsf4	68	82.065	Hippocampus_comes
ENSBTAG00000013309	SRSF4	92	83.766	ENSSTOG00000015908	SRSF4	67	94.277	Ictidomys_tridecemlineatus
ENSBTAG00000013309	SRSF4	61	76.898	ENSJJAG00000022153	Srsf4	92	75.711	Jaculus_jaculus
ENSBTAG00000013309	SRSF4	91	84.802	ENSLAFG00000002575	SRSF4	88	85.903	Loxodonta_africana
ENSBTAG00000013309	SRSF4	92	88.937	ENSMFAG00000041784	SRSF4	92	90.456	Macaca_fascicularis
ENSBTAG00000013309	SRSF4	87	88.028	ENSMMUG00000007110	SRSF4	87	89.671	Macaca_mulatta
ENSBTAG00000013309	SRSF4	92	88.937	ENSMNEG00000034931	SRSF4	92	90.456	Macaca_nemestrina
ENSBTAG00000013309	SRSF4	92	88.720	ENSMLEG00000031619	SRSF4	92	90.239	Mandrillus_leucophaeus
ENSBTAG00000013309	SRSF4	92	74.505	ENSMGAG00000002400	SRSF4	68	82.012	Meleagris_gallopavo
ENSBTAG00000013309	SRSF4	92	85.313	ENSMAUG00000021940	Srsf4	66	94.118	Mesocricetus_auratus
ENSBTAG00000013309	SRSF4	65	93.865	ENSMICG00000043567	SRSF4	92	89.700	Microcebus_murinus
ENSBTAG00000013309	SRSF4	92	81.838	ENSMOCG00000013319	Srsf4	92	83.514	Microtus_ochrogaster
ENSBTAG00000013309	SRSF4	69	57.895	ENSMMOG00000013653	srsf4	65	80.226	Mola_mola
ENSBTAG00000013309	SRSF4	62	92.182	ENSMODG00000011052	SRSF4	97	91.318	Monodelphis_domestica
ENSBTAG00000013309	SRSF4	52	70.703	ENSMALG00000013392	srsf4	66	86.441	Monopterus_albus
ENSBTAG00000013309	SRSF4	92	81.466	MGP_CAROLIEiJ_G0026555	Srsf4	92	82.251	Mus_caroli
ENSBTAG00000013309	SRSF4	92	81.681	ENSMUSG00000028911	Srsf4	92	82.035	Mus_musculus
ENSBTAG00000013309	SRSF4	61	95.395	MGP_PahariEiJ_G0028887	Srsf4	67	93.293	Mus_pahari
ENSBTAG00000013309	SRSF4	92	81.681	MGP_SPRETEiJ_G0027535	Srsf4	92	82.684	Mus_spretus
ENSBTAG00000013309	SRSF4	68	93.155	ENSMPUG00000015470	SRSF4	65	96.012	Mustela_putorius_furo
ENSBTAG00000013309	SRSF4	62	89.602	ENSMLUG00000014770	SRSF4	92	86.957	Myotis_lucifugus
ENSBTAG00000013309	SRSF4	92	88.352	ENSNGAG00000012225	Srsf4	92	83.077	Nannospalax_galili
ENSBTAG00000013309	SRSF4	92	88.720	ENSNLEG00000009916	SRSF4	92	90.239	Nomascus_leucogenys
ENSBTAG00000013309	SRSF4	92	84.061	ENSOPRG00000010098	SRSF4	93	83.624	Ochotona_princeps
ENSBTAG00000013309	SRSF4	66	86.239	ENSODEG00000003230	SRSF4	92	81.760	Octodon_degus
ENSBTAG00000013309	SRSF4	66	90.634	ENSOCUG00000001837	SRSF4	67	92.121	Oryctolagus_cuniculus
ENSBTAG00000013309	SRSF4	92	89.130	ENSOGAG00000015515	SRSF4	92	89.130	Otolemur_garnettii
ENSBTAG00000013309	SRSF4	92	88.720	ENSPPAG00000028357	SRSF4	92	90.239	Pan_paniscus
ENSBTAG00000013309	SRSF4	92	91.485	ENSPPRG00000016248	SRSF4	92	91.703	Panthera_pardus
ENSBTAG00000013309	SRSF4	92	88.720	ENSPTRG00000000445	SRSF4	92	90.239	Pan_troglodytes
ENSBTAG00000013309	SRSF4	92	88.720	ENSPANG00000021937	SRSF4	92	90.239	Papio_anubis
ENSBTAG00000013309	SRSF4	60	92.014	ENSPEMG00000003365	Srsf4	91	81.690	Peromyscus_maniculatus_bairdii
ENSBTAG00000013309	SRSF4	92	88.503	ENSPPYG00000001629	SRSF4	92	89.805	Pongo_abelii
ENSBTAG00000013309	SRSF4	92	85.033	ENSPCAG00000009879	SRSF4	92	85.466	Procavia_capensis
ENSBTAG00000013309	SRSF4	92	90.217	ENSPCOG00000027341	SRSF4	92	90.435	Propithecus_coquereli
ENSBTAG00000013309	SRSF4	67	75.566	ENSPVAG00000012500	SRSF4	67	74.208	Pteropus_vampyrus
ENSBTAG00000013309	SRSF4	61	95.681	ENSRNOG00000010007	Srsf4	92	83.114	Rattus_norvegicus
ENSBTAG00000013309	SRSF4	92	88.937	ENSRBIG00000035789	SRSF4	92	90.456	Rhinopithecus_bieti
ENSBTAG00000013309	SRSF4	92	88.937	ENSRROG00000029463	SRSF4	92	90.456	Rhinopithecus_roxellana
ENSBTAG00000013309	SRSF4	92	86.938	ENSSBOG00000027098	SRSF4	92	88.437	Saimiri_boliviensis_boliviensis
ENSBTAG00000013309	SRSF4	58	91.367	ENSSHAG00000012407	SRSF4	99	90.311	Sarcophilus_harrisii
ENSBTAG00000013309	SRSF4	51	75.410	ENSSARG00000001277	SRSF4	53	69.388	Sorex_araneus
ENSBTAG00000013309	SRSF4	68	82.934	ENSSPUG00000015318	-	66	83.841	Sphenodon_punctatus
ENSBTAG00000013309	SRSF4	52	85.507	ENSSPAG00000014538	srsf4	83	85.950	Stegastes_partitus
ENSBTAG00000013309	SRSF4	66	94.154	ENSSSCG00000003589	SRSF4	94	91.558	Sus_scrofa
ENSBTAG00000013309	SRSF4	87	72.300	ENSTGUG00000000765	SRSF4	64	80.903	Taeniopygia_guttata
ENSBTAG00000013309	SRSF4	53	68.364	ENSTRUG00000011891	srsf4	62	80.729	Takifugu_rubripes
ENSBTAG00000013309	SRSF4	92	90.652	ENSTTRG00000002572	SRSF4	92	90.870	Tursiops_truncatus
ENSBTAG00000013309	SRSF4	92	88.412	ENSUAMG00000006106	SRSF4	92	89.224	Ursus_americanus
ENSBTAG00000013309	SRSF4	89	86.728	ENSVVUG00000012690	SRSF4	90	88.018	Vulpes_vulpes