EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000013663 (Gene tree)
Gene ID: 616567
Gene Symbol: CMSS1
Alias: C1H3orf26|C3orf26
Full Name: Uncharacterized protein C3orf26 homolog
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 395269 bases
Position: chr1:44086074-44481342
Accession: Q2T9Y1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000061038	CMS1	PF14617.6	4.7e-32	1	1
ENSBTAP00000018160	CMS1	PF14617.6	5e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000067402	CMSS1-202	1155	-	ENSBTAP00000061038	276 (aa)	-	-
ENSBTAT00000018160	CMSS1-201	840	-	ENSBTAP00000018160	279 (aa)	-	Q2T9Y1

Gene Model

Click here to download ENSBTAG00000013663's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000013663's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000013663	CMSS1	100	86.380	ENSG00000184220	CMSS1	99	90.123	Homo_sapiens
ENSBTAG00000013663	CMSS1	73	63.861	ENSAPOG00000010604	cmss1	82	63.861	Acanthochromis_polyacanthus
ENSBTAG00000013663	CMSS1	93	88.760	ENSAMEG00000004092	CMSS1	97	89.200	Ailuropoda_melanoleuca
ENSBTAG00000013663	CMSS1	73	53.960	ENSACIG00000021854	cmss1	75	53.960	Amphilophus_citrinellus
ENSBTAG00000013663	CMSS1	100	52.595	ENSAOCG00000013361	cmss1	100	52.249	Amphiprion_ocellaris
ENSBTAG00000013663	CMSS1	100	51.724	ENSAPEG00000005829	cmss1	100	52.414	Amphiprion_percula
ENSBTAG00000013663	CMSS1	100	52.381	ENSATEG00000008209	cmss1	100	54.110	Anabas_testudineus
ENSBTAG00000013663	CMSS1	83	68.559	ENSAPLG00000010542	CMSS1	99	68.559	Anas_platyrhynchos
ENSBTAG00000013663	CMSS1	95	61.852	ENSACAG00000011065	CMSS1	92	64.286	Anolis_carolinensis
ENSBTAG00000013663	CMSS1	100	86.786	ENSANAG00000023565	CMSS1	100	85.000	Aotus_nancymaae
ENSBTAG00000013663	CMSS1	100	48.675	ENSACLG00000027294	cmss1	100	49.333	Astatotilapia_calliptera
ENSBTAG00000013663	CMSS1	100	46.000	ENSAMXG00000002046	cmss1	100	47.959	Astyanax_mexicanus
ENSBTAG00000013663	CMSS1	100	86.786	ENSCJAG00000000610	CMSS1	100	85.714	Callithrix_jacchus
ENSBTAG00000013663	CMSS1	100	89.493	ENSCAFG00000009230	CMSS1	100	89.493	Canis_familiaris
ENSBTAG00000013663	CMSS1	94	89.231	ENSCAFG00020009464	-	91	90.361	Canis_lupus_dingo
ENSBTAG00000013663	CMSS1	89	79.268	ENSCAFG00020024156	-	77	79.268	Canis_lupus_dingo
ENSBTAG00000013663	CMSS1	100	96.739	ENSCHIG00000013003	CMSS1	100	96.739	Capra_hircus
ENSBTAG00000013663	CMSS1	100	85.870	ENSTSYG00000009266	CMSS1	100	85.870	Carlito_syrichta
ENSBTAG00000013663	CMSS1	81	70.742	ENSCAPG00000013584	CMSS1	100	70.306	Cavia_aperea
ENSBTAG00000013663	CMSS1	100	85.663	ENSCPOG00000014680	CMSS1	100	85.663	Cavia_porcellus
ENSBTAG00000013663	CMSS1	100	88.214	ENSCCAG00000034685	CMSS1	100	86.429	Cebus_capucinus
ENSBTAG00000013663	CMSS1	100	87.097	ENSCATG00000031980	CMSS1	100	87.097	Cercocebus_atys
ENSBTAG00000013663	CMSS1	83	91.667	ENSCLAG00000011241	CMSS1	98	91.667	Chinchilla_lanigera
ENSBTAG00000013663	CMSS1	88	88.115	ENSCSAG00000006024	CMSS1	99	88.115	Chlorocebus_sabaeus
ENSBTAG00000013663	CMSS1	100	69.892	ENSCHOG00000012098	CMSS1	100	68.459	Choloepus_hoffmanni
ENSBTAG00000013663	CMSS1	71	40.500	ENSCING00000014848	-	100	41.711	Ciona_intestinalis
ENSBTAG00000013663	CMSS1	100	86.738	ENSCANG00000031337	CMSS1	100	86.738	Colobus_angolensis_palliatus
ENSBTAG00000013663	CMSS1	100	81.004	ENSCGRG00001014305	Cmss1	100	81.004	Cricetulus_griseus_chok1gshd
ENSBTAG00000013663	CMSS1	93	81.641	ENSCGRG00000006722	Cmss1	97	82.329	Cricetulus_griseus_crigri
ENSBTAG00000013663	CMSS1	100	50.505	ENSCSEG00000004958	cmss1	100	51.701	Cynoglossus_semilaevis
ENSBTAG00000013663	CMSS1	100	51.203	ENSCVAG00000005039	cmss1	100	53.125	Cyprinodon_variegatus
ENSBTAG00000013663	CMSS1	100	47.458	ENSDARG00000112579	cmss1	100	47.000	Danio_rerio
ENSBTAG00000013663	CMSS1	95	85.115	ENSDNOG00000040418	CMSS1	88	85.944	Dasypus_novemcinctus
ENSBTAG00000013663	CMSS1	100	86.380	ENSDORG00000010461	Cmss1	100	86.380	Dipodomys_ordii
ENSBTAG00000013663	CMSS1	99	79.562	ENSEASG00005010966	CMSS1	99	90.411	Equus_asinus_asinus
ENSBTAG00000013663	CMSS1	93	87.984	ENSECAG00000015662	CMSS1	99	89.823	Equus_caballus
ENSBTAG00000013663	CMSS1	100	55.914	ENSEEUG00000007624	-	100	56.989	Erinaceus_europaeus
ENSBTAG00000013663	CMSS1	100	50.333	ENSELUG00000019459	cmss1	100	50.333	Esox_lucius
ENSBTAG00000013663	CMSS1	100	92.115	ENSFCAG00000044577	CMSS1	100	92.115	Felis_catus
ENSBTAG00000013663	CMSS1	86	64.135	ENSFALG00000005816	CMSS1	100	64.135	Ficedula_albicollis
ENSBTAG00000013663	CMSS1	83	89.035	ENSFDAG00000012577	CMSS1	100	89.035	Fukomys_damarensis
ENSBTAG00000013663	CMSS1	82	61.472	ENSFHEG00000012008	cmss1	95	61.472	Fundulus_heteroclitus
ENSBTAG00000013663	CMSS1	99	50.853	ENSGMOG00000016729	cmss1	100	53.025	Gadus_morhua
ENSBTAG00000013663	CMSS1	98	62.593	ENSGALG00000015267	CMSS1	95	65.462	Gallus_gallus
ENSBTAG00000013663	CMSS1	75	65.217	ENSGAFG00000021217	cmss1	77	64.851	Gambusia_affinis
ENSBTAG00000013663	CMSS1	99	47.312	ENSGACG00000002798	cmss1	100	48.387	Gasterosteus_aculeatus
ENSBTAG00000013663	CMSS1	88	68.182	ENSGAGG00000019861	CMSS1	94	68.182	Gopherus_agassizii
ENSBTAG00000013663	CMSS1	93	87.549	ENSGGOG00000014125	CMSS1	95	87.550	Gorilla_gorilla
ENSBTAG00000013663	CMSS1	100	48.505	ENSHBUG00000008431	cmss1	100	49.164	Haplochromis_burtoni
ENSBTAG00000013663	CMSS1	92	85.375	ENSHGLG00000019481	CMSS1	98	85.542	Heterocephalus_glaber_female
ENSBTAG00000013663	CMSS1	93	84.825	ENSHGLG00100010314	CMSS1	97	85.542	Heterocephalus_glaber_male
ENSBTAG00000013663	CMSS1	100	50.847	ENSHCOG00000003222	cmss1	100	52.703	Hippocampus_comes
ENSBTAG00000013663	CMSS1	100	48.475	ENSIPUG00000011591	cmss1	100	46.075	Ictalurus_punctatus
ENSBTAG00000013663	CMSS1	100	90.323	ENSSTOG00000019366	CMSS1	100	88.172	Ictidomys_tridecemlineatus
ENSBTAG00000013663	CMSS1	100	83.871	ENSJJAG00000014894	Cmss1	100	83.871	Jaculus_jaculus
ENSBTAG00000013663	CMSS1	73	54.950	ENSKMAG00000002390	cmss1	81	54.950	Kryptolebias_marmoratus
ENSBTAG00000013663	CMSS1	80	52.500	ENSLBEG00000006298	cmss1	83	57.635	Labrus_bergylta
ENSBTAG00000013663	CMSS1	83	63.913	ENSLACG00000009293	CMSS1	100	63.913	Latimeria_chalumnae
ENSBTAG00000013663	CMSS1	100	50.704	ENSLOCG00000009391	cmss1	100	50.883	Lepisosteus_oculatus
ENSBTAG00000013663	CMSS1	83	89.912	ENSLAFG00000017509	CMSS1	100	89.912	Loxodonta_africana
ENSBTAG00000013663	CMSS1	100	87.814	ENSMFAG00000045006	CMSS1	100	87.814	Macaca_fascicularis
ENSBTAG00000013663	CMSS1	100	87.455	ENSMMUG00000002939	CMSS1	98	90.455	Macaca_mulatta
ENSBTAG00000013663	CMSS1	100	87.455	ENSMNEG00000031315	CMSS1	100	87.455	Macaca_nemestrina
ENSBTAG00000013663	CMSS1	100	87.097	ENSMLEG00000033660	CMSS1	100	87.097	Mandrillus_leucophaeus
ENSBTAG00000013663	CMSS1	100	52.843	ENSMAMG00000017176	cmss1	100	54.138	Mastacembelus_armatus
ENSBTAG00000013663	CMSS1	100	48.675	ENSMZEG00005021886	cmss1	100	49.333	Maylandia_zebra
ENSBTAG00000013663	CMSS1	83	67.544	ENSMGAG00000014360	CMSS1	100	67.544	Meleagris_gallopavo
ENSBTAG00000013663	CMSS1	100	60.573	ENSMAUG00000020609	Cmss1	100	60.573	Mesocricetus_auratus
ENSBTAG00000013663	CMSS1	100	88.889	ENSMICG00000048977	CMSS1	100	88.530	Microcebus_murinus
ENSBTAG00000013663	CMSS1	100	81.362	ENSMOCG00000021937	Cmss1	100	81.362	Microtus_ochrogaster
ENSBTAG00000013663	CMSS1	73	61.386	ENSMMOG00000019794	cmss1	84	61.386	Mola_mola
ENSBTAG00000013663	CMSS1	94	71.756	ENSMODG00000002275	CMSS1	92	74.899	Monodelphis_domestica
ENSBTAG00000013663	CMSS1	100	52.397	ENSMALG00000004250	cmss1	100	51.203	Monopterus_albus
ENSBTAG00000013663	CMSS1	100	83.214	MGP_CAROLIEiJ_G0020824	Cmss1	100	83.214	Mus_caroli
ENSBTAG00000013663	CMSS1	100	84.286	ENSMUSG00000022748	Cmss1	100	84.286	Mus_musculus
ENSBTAG00000013663	CMSS1	100	81.429	MGP_PahariEiJ_G0016524	Cmss1	100	81.429	Mus_pahari
ENSBTAG00000013663	CMSS1	100	83.571	MGP_SPRETEiJ_G0021724	Cmss1	100	83.571	Mus_spretus
ENSBTAG00000013663	CMSS1	94	90.769	ENSMPUG00000011324	CMSS1	95	91.532	Mustela_putorius_furo
ENSBTAG00000013663	CMSS1	93	89.575	ENSMLUG00000001131	CMSS1	95	89.641	Myotis_lucifugus
ENSBTAG00000013663	CMSS1	100	83.513	ENSNGAG00000020316	Cmss1	100	83.513	Nannospalax_galili
ENSBTAG00000013663	CMSS1	100	48.344	ENSNBRG00000003095	cmss1	100	49.828	Neolamprologus_brichardi
ENSBTAG00000013663	CMSS1	100	88.889	ENSNLEG00000034172	CMSS1	100	88.889	Nomascus_leucogenys
ENSBTAG00000013663	CMSS1	83	66.228	ENSMEUG00000014505	CMSS1	100	66.228	Notamacropus_eugenii
ENSBTAG00000013663	CMSS1	100	89.606	ENSOPRG00000002986	CMSS1	100	88.530	Ochotona_princeps
ENSBTAG00000013663	CMSS1	100	85.305	ENSODEG00000005226	-	100	85.305	Octodon_degus
ENSBTAG00000013663	CMSS1	100	74.552	ENSODEG00000001853	-	100	73.118	Octodon_degus
ENSBTAG00000013663	CMSS1	100	70.251	ENSODEG00000009446	-	100	70.251	Octodon_degus
ENSBTAG00000013663	CMSS1	100	81.139	ENSODEG00000003558	-	100	81.139	Octodon_degus
ENSBTAG00000013663	CMSS1	73	60.396	ENSONIG00000006678	cmss1	77	60.396	Oreochromis_niloticus
ENSBTAG00000013663	CMSS1	93	68.992	ENSOANG00000007529	CMSS1	99	73.276	Ornithorhynchus_anatinus
ENSBTAG00000013663	CMSS1	100	89.130	ENSOCUG00000025366	CMSS1	100	89.130	Oryctolagus_cuniculus
ENSBTAG00000013663	CMSS1	100	56.491	ENSORLG00000020340	cmss1	100	56.140	Oryzias_latipes
ENSBTAG00000013663	CMSS1	76	57.820	ENSORLG00020012235	cmss1	85	57.921	Oryzias_latipes_hni
ENSBTAG00000013663	CMSS1	73	57.921	ENSORLG00015015551	cmss1	75	57.921	Oryzias_latipes_hsok
ENSBTAG00000013663	CMSS1	100	53.979	ENSOMEG00000012555	cmss1	100	55.017	Oryzias_melastigma
ENSBTAG00000013663	CMSS1	83	90.351	ENSOGAG00000002045	CMSS1	100	90.351	Otolemur_garnettii
ENSBTAG00000013663	CMSS1	94	96.169	ENSOARG00000017899	CMSS1	89	96.525	Ovis_aries
ENSBTAG00000013663	CMSS1	93	87.549	ENSPPAG00000038515	CMSS1	92	87.952	Pan_paniscus
ENSBTAG00000013663	CMSS1	100	91.039	ENSPPRG00000016767	CMSS1	100	91.039	Panthera_pardus
ENSBTAG00000013663	CMSS1	100	90.681	ENSPTIG00000018274	CMSS1	100	90.681	Panthera_tigris_altaica
ENSBTAG00000013663	CMSS1	100	86.738	ENSPTRG00000015157	CMSS1	100	86.738	Pan_troglodytes
ENSBTAG00000013663	CMSS1	93	85.992	ENSPANG00000019980	CMSS1	96	85.944	Papio_anubis
ENSBTAG00000013663	CMSS1	91	56.604	ENSPKIG00000012609	cmss1	97	56.371	Paramormyrops_kingsleyae
ENSBTAG00000013663	CMSS1	83	71.930	ENSPSIG00000003849	CMSS1	99	71.930	Pelodiscus_sinensis
ENSBTAG00000013663	CMSS1	73	60.099	ENSPMGG00000010286	cmss1	87	60.099	Periophthalmus_magnuspinnatus
ENSBTAG00000013663	CMSS1	100	82.500	ENSPEMG00000016384	Cmss1	100	82.143	Peromyscus_maniculatus_bairdii
ENSBTAG00000013663	CMSS1	74	52.451	ENSPMAG00000001146	cmss1	99	52.970	Petromyzon_marinus
ENSBTAG00000013663	CMSS1	90	75.000	ENSPCIG00000015656	CMSS1	94	75.304	Phascolarctos_cinereus
ENSBTAG00000013663	CMSS1	100	50.329	ENSPFOG00000016849	cmss1	100	53.846	Poecilia_formosa
ENSBTAG00000013663	CMSS1	100	50.000	ENSPLAG00000008323	cmss1	100	53.497	Poecilia_latipinna
ENSBTAG00000013663	CMSS1	100	50.987	ENSPMEG00000021020	cmss1	100	52.159	Poecilia_mexicana
ENSBTAG00000013663	CMSS1	82	59.914	ENSPREG00000007618	cmss1	69	62.871	Poecilia_reticulata
ENSBTAG00000013663	CMSS1	100	86.738	ENSPPYG00000013606	CMSS1	100	86.738	Pongo_abelii
ENSBTAG00000013663	CMSS1	100	89.247	ENSPCOG00000020035	CMSS1	100	88.889	Propithecus_coquereli
ENSBTAG00000013663	CMSS1	100	78.853	ENSPVAG00000017031	CMSS1	100	78.853	Pteropus_vampyrus
ENSBTAG00000013663	CMSS1	91	48.551	ENSPNYG00000013428	cmss1	97	49.270	Pundamilia_nyererei
ENSBTAG00000013663	CMSS1	100	48.649	ENSPNAG00000007912	cmss1	100	48.980	Pygocentrus_nattereri
ENSBTAG00000013663	CMSS1	93	82.101	ENSRNOG00000027888	Cmss1	96	82.000	Rattus_norvegicus
ENSBTAG00000013663	CMSS1	100	86.738	ENSRBIG00000037931	CMSS1	100	86.738	Rhinopithecus_bieti
ENSBTAG00000013663	CMSS1	100	86.738	ENSRROG00000042910	CMSS1	100	86.738	Rhinopithecus_roxellana
ENSBTAG00000013663	CMSS1	100	82.143	ENSSBOG00000030980	CMSS1	95	87.952	Saimiri_boliviensis_boliviensis
ENSBTAG00000013663	CMSS1	90	72.619	ENSSHAG00000009321	CMSS1	99	72.619	Sarcophilus_harrisii
ENSBTAG00000013663	CMSS1	100	53.242	ENSSFOG00015001509	cmss1	100	54.483	Scleropages_formosus
ENSBTAG00000013663	CMSS1	100	53.265	ENSSMAG00000001653	cmss1	100	52.318	Scophthalmus_maximus
ENSBTAG00000013663	CMSS1	100	53.608	ENSSDUG00000007719	cmss1	100	53.952	Seriola_dumerili
ENSBTAG00000013663	CMSS1	75	63.768	ENSSLDG00000012300	cmss1	88	55.450	Seriola_lalandi_dorsalis
ENSBTAG00000013663	CMSS1	100	74.286	ENSSARG00000003584	CMSS1	100	74.286	Sorex_araneus
ENSBTAG00000013663	CMSS1	82	69.027	ENSSPUG00000003865	CMSS1	100	69.027	Sphenodon_punctatus
ENSBTAG00000013663	CMSS1	75	64.734	ENSSPAG00000019182	cmss1	63	64.851	Stegastes_partitus
ENSBTAG00000013663	CMSS1	100	92.473	ENSSSCG00000011970	CMSS1	100	92.473	Sus_scrofa
ENSBTAG00000013663	CMSS1	83	64.035	ENSTGUG00000013635	CMSS1	99	64.035	Taeniopygia_guttata
ENSBTAG00000013663	CMSS1	100	46.382	ENSTRUG00000015265	cmss1	100	49.645	Takifugu_rubripes
ENSBTAG00000013663	CMSS1	73	53.960	ENSTNIG00000002880	cmss1	73	53.960	Tetraodon_nigroviridis
ENSBTAG00000013663	CMSS1	100	61.071	ENSTBEG00000016722	CMSS1	100	61.071	Tupaia_belangeri
ENSBTAG00000013663	CMSS1	100	88.889	ENSTTRG00000001562	CMSS1	100	88.889	Tursiops_truncatus
ENSBTAG00000013663	CMSS1	97	86.496	ENSUAMG00000024209	CMSS1	100	91.928	Ursus_americanus
ENSBTAG00000013663	CMSS1	100	87.681	ENSUMAG00000001983	CMSS1	100	87.681	Ursus_maritimus
ENSBTAG00000013663	CMSS1	100	68.817	ENSVPAG00000000263	CMSS1	100	68.817	Vicugna_pacos
ENSBTAG00000013663	CMSS1	79	90.783	ENSVVUG00000007776	-	89	88.496	Vulpes_vulpes
ENSBTAG00000013663	CMSS1	89	89.837	ENSVVUG00000021647	-	100	89.837	Vulpes_vulpes
ENSBTAG00000013663	CMSS1	100	55.986	ENSXETG00000011858	cmss1	100	55.634	Xenopus_tropicalis
ENSBTAG00000013663	CMSS1	75	63.462	ENSXCOG00000018724	cmss1	69	63.366	Xiphophorus_couchianus
ENSBTAG00000013663	CMSS1	75	63.462	ENSXMAG00000011243	cmss1	76	63.366	Xiphophorus_maculatus